BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G37030.1
Length=1917
Score E
Sequences producing significant alignments: (Bits) Value
Ahg947346 jgi|Araly1|947346|scaffold_703575.1 1195 0.0
Ahg891304 jgi|Araly1|891304|Al_scaffold_0007_3290 1016 0.0
Ahg493692 jgi|Araly1|493692|fgenesh2_kg.7__3125__AT5G37160.1 942 0.0
Ahg355656 jgi|Araly1|355656|fgenesh1_pg.C_scaffold_7002829 813 0.0
Ahg895489 jgi|Araly1|895489|Al_scaffold_0006_3485 667 0.0
> Ahg947346 jgi|Araly1|947346|scaffold_703575.1
Length=2500
Score = 1195 bits (647), Expect = 0.0
Identities = 804/879 (91%), Gaps = 14/879 (2%)
Strand=Plus/Plus
Query 1032 GACTGGAAATATAGAAGTTCTTGTGGTTGATGAGGCAGCTCAGCTTAAAGAATGTGAATC 1091
||| |||||| ||||| ||||||||||||| ||||| ||||||||||| |||||||||||
Sbjct 1529 GACAGGAAATGTAGAATTTCTTGTGGTTGACGAGGCGGCTCAGCTTAAGGAATGTGAATC 1588
Query 1092 AGTTGCTGCATTGCAACTTCCTGGACTACGTCACGCCATTCTAATAGGAGATGAGTTTCA 1151
|||||||||||||||||||| ||||| ||||| || ||||| ||||||||||||||||
Sbjct 1589 AGTTGCTGCATTGCAACTTCAGGGACTGCGTCATGCTGTTCTACTAGGAGATGAGTTTCA 1648
Query 1152 GTTACCTGCAATGGTTCATAACGATCAATGCGAGAAGGCGAAATTCGGAAGAAGCTTGTT 1211
||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct 1649 GTTACCTGCAATGGTTCATAACGATGAATGCGAAAAGGCGAAATTCGGAAGAAGCTTGTT 1708
Query 1212 CGAGAGATTGGTT-CTGCTTGGTCATA-AAAAGCATTTGCTTGATGTTCAGTACCGAATG 1269
|||||||||||| | |||||||||| ||| || |||||||||||||| || ||||||
Sbjct 1709 TGAGAGATTGGTTAC-ACTTGGTCATAGCAAA-CACTTGCTTGATGTTCAATATCGAATG 1766
Query 1270 CATCCTTCGATTAGTCGTTTCCCTTATAAAGAGTTTTATGGTGGGAGAATCAAAGATGCT 1329
|| |||||||||| | |||||||| |||||||||| ||||||||||||||||||||||||
Sbjct 1767 CACCCTTCGATTATTAGTTTCCCTAATAAAGAGTTCTATGGTGGGAGAATCAAAGATGCT 1826
Query 1330 GCAAATGTTCAAGAAAGTATTTATC-AAAAGAGGTTTCTTCAAGGAAACATGTTTGGCTC 1388
|| |||||||||||||| ||||| | ||||| | | ||||||||||||||||||||||||
Sbjct 1827 GCTAATGTTCAAGAAAGCATTTA-CGAAAAGCGATATCTTCAAGGAAACATGTTTGGCTC 1885
Query 1389 ATTTTCTTTTATCAATGTTGGACGTGGAAAAGAAGAGTTTGGTGATGGAG-ATAGTCCCA 1447
|| || ||||||||||| || | |||||||||||||||||||||||| | |||||||||
Sbjct 1886 CTTCTCGTTTATCAATGTAGGTCATGGAAAAGAAGAGTTTGGTGATGG-GCATAGTCCCA 1944
Query 1448 AGAACATGGTTGAAGTTGCTGTGGTTTCTGAAATCATATCAAATCTTTTCAAAGTTTCTA 1507
||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |
Sbjct 1945 AGAACATGGTTGAAGTTGCTGTGATTTCTGAAATCCTATCAAATCTTTTCAAAGTTTCAA 2004
Query 1508 GGGAAAGAAAGATGAAAATGAGTGTTGGAGTGATTACTCCTTACAAAGGACAAGTTAGAG 1567
| ||||||||||| || |||||||||||||||||||| ||||| ||||||||||| ||||
Sbjct 2005 GTGAAAGAAAGATTAATATGAGTGTTGGAGTGATTACACCTTATAAAGGACAAGTGAGAG 2064
Query 1568 CAATCCAAGAGAGAATCAGAGATAAGTACAGTTCCTTATCAGGTGAGCTTTTCAC-TGTG 1626
|||||||||| ||||||| |||||||||||||||||||||||||||||||||||| | ||
Sbjct 2065 CAATCCAAGACAGAATCATAGATAAGTACAGTTCCTTATCAGGTGAGCTTTTCACAT-TG 2123
Query 1627 AATGTTCGGTCTGTAGATGGGTTTCAAGGTGGTGAAGAAGACATTATCATCATCTCTACC 1686
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct 2124 AATGTTCGGTCGGTAGATGGGTTTCAAGGTGGTGAAGAAGATGTTATCATCATCTCCACC 2183
Query 1687 GTTAGAAGTAA-TAGTAACGGGAAGGTTGGATTTCTCAGTAACCGTCAAAGAGCCAATGT 1745
||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct 2184 GTTAGAAGTAACT-GTAACAGGAAGGTTGGATTTCTCAGTAACCGTCAAAGAGCCAACGT 2242
Query 1746 GGCACTCACTCGAGCTAGGCACTGTTTATGGGTGATTGGAAATGAGTCAACACTGGCTCG 1805
||| |||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||
Sbjct 2243 GGCGCTCACTCGAGCTAGACACTGTTTATGGGTGATTGGAAATGAGACAACACTAGCTCG 2302
Query 1806 GAGTGGTTCGATTTGGGC-AAACCTTATAAGTGACTCGAAGAGACGTAAATGCTTCTATG 1864
||||||||| |||||||| ||| ||| |||| ||||||||||||||||||||||||||||
Sbjct 2303 GAGTGGTTCAATTTGGGCGAAA-CTTGTAAGGGACTCGAAGAGACGTAAATGCTTCTATG 2361
Query 1865 ATGCTAAAGATGATAAGAGATTGAGAGATGCCATGAATG 1903
|||||||||||||||||||||||||||||||||||||||
Sbjct 2362 ATGCTAAAGATGATAAGAGATTGAGAGATGCCATGAATG 2400
Score = 545 bits (295), Expect = 3e-154
Identities = 468/549 (85%), Gaps = 21/549 (4%)
Strand=Plus/Plus
Query 493 GCTCCCAACTTTGATCTCATCCAGAGTGTTCTTCAGCCAAATACTGCGGGTATGGAGCCA 552
||||||||||||||| ||||||||||| |||||||||||||||| |||||||| | | |
Sbjct 600 GCTCCCAACTTTGATTTCATCCAGAGTATTCTTCAGCCAAATACAGCGGGTATCAAACAA 659
Query 553 ATTGTTTCTTCTA-GAACTTGGGGACAAAATGTTTTGGATATAATCCGTTCATCAAAATT 611
| |||||| |||| ||| || ||||||||||||||||||||||||||||||| | || ||
Sbjct 660 ACTGTTTCGTCTAGGAA-TTTGGGACAAAATGTTTTGGATATAATCCGTTCAACGAACTT 718
Query 612 GAACTCTTCACAAGAAGCTGCAATCTTGAGCTGCCTTGAGACAAGAGATAGTAATCACAA 671
||||||||| ||| || ||||||||||||||||||||||||| ||| | ||||| || ||
Sbjct 719 GAACTCTTCCCAAAAATCTGCAATCTTGAGCTGCCTTGAGACTAGAAACAGTAAACATAA 778
Query 672 GAACAGTGTGAAACTCATATGGGGACCT-CT--TA-A-G----ACAAAGACGGTCGCTAC 722
||||||||||||||| |||||||||||| || | | | ||||||| ||| | ||
Sbjct 779 GAACAGTGTGAAACTGATATGGGGACCTCCTGGAACAGGCAAAACAAAGATGGTTTCGAC 838
Query 723 TCTTCTCCT-TGTCCTTCTCAAGCTAAGGTGCAAAACAGTTGTGTGTGCTCCTACAAACA 781
|||||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct 839 TCTTCT-CTCTGCCCTTCTCAAACTACGGTGCAAAACAGTTGTGTGTGCTCCTACAAACA 897
Query 782 CAGCTATTGTAGAAGTAACATCAAGGCTATTGGCTTTATCGAATAAATATTCAGAACATG 841
||||| |||||||||||||||| |||||||||||||||||||| | | |||||||||||
Sbjct 898 CAGCTGTTGTAGAAGTAACATCGAGGCTATTGGCTTTATCGAAGACTTCTTCAGAACATG 957
Query 842 CCACTTATGGCTTGGGGAATAtttttttAGCTGGAAACCAAAAAAGAATGAGGATCAAAG 901
| | |||||| |||||||||||| |||||||||| ||||| || |||||| ||||||||
Sbjct 958 CTAGTTATGGATTGGGGAATATTGTTTTAGCTGGTAACCACAACAGAATGGGGATCAAAA 1017
Query 902 AT-ACTGATTATCTTCGTAATGTCTTTCTTGATCATCGTATAAGCAAACTTC-GTAAACT 959
|| | |||| ||||||| ||||| |||||||||||||| || || | ||| | |||||
Sbjct 1018 ATGA-TGATGATCTTCGCAATGTGTTTCTTGATCATCGCATCAGTAGTTTTCAG-AAACT 1075
Query 960 GTTTTTATCTAC-TTGTGGATGGAAGCAGAG-TTTGGAGTCAATCATAGATCTTCTTGAA 1017
|||||| || || || ||||||||||||||| |||| ||||| | ||| || ||||||||
Sbjct 1076 GTTTTTGTC-ACCTTATGGATGGAAGCAGAGATTTG-AGTCAGTGATACATTTTCTTGAA 1133
Query 1018 AACACAGAG 1026
|||||||||
Sbjct 1134 AACACAGAG 1142
Score = 337 bits (182), Expect = 2e-91
Identities = 356/438 (81%), Gaps = 20/438 (5%)
Strand=Plus/Plus
Query 9 AAACGAGAAAACAAGTCTACTTGATAGAATATTTTCTTGGTCTATGGAAGATATTCTCAA 68
||| ||||||||| |||||||||||||||| |||||||||||||| |||||||||||||
Sbjct 29 AAAGGAGAAAACAGGTCTACTTGATAGAATCTTTTCTTGGTCTATCAAAGATATTCTCAA 88
Query 69 CAAAGATCTCTACAAGCAAAAGATAAAGACTATACCAGACAAGTTTAGTTCCGTTAATGA 128
|||||||||||||||||||||||||||||| |||||||||| |||||||||| | ||||
Sbjct 89 CAAAGATCTCTACAAGCAAAAGATAAAGACAATACCAGACAGGTTTAGTTCCACTGATGA 148
Query 129 ATACTTGAAGTGTTTTGTTCCTCATCTACTGGAGGAAACGCGAACCGAGTTGTCCACAAG 188
|||||| ||||||||||||||||| ||||| ||||||| | |||||| ||| | | ||||
Sbjct 149 ATACTTCAAGTGTTTTGTTCCTCACCTACTTGAGGAAATGAGAACCGCGTTATGCTCAAG 208
Query 189 CTTCAAATCTTTGTCAAAAGCTCATCTCTTTGAAATTAGTTCCTTGGAGACAA-TGACAA 247
|||||||||| | || ||||||| ||||||| |||| ||||||||||||| || | |||
Sbjct 209 CTTCAAATCTATATCGAAAGCTCCTCTCTTTAAAATAAGTTCCTTGGAGAAAAGT-ACAC 267
Query 248 AGGAATCAAGTGGAAGCTTATCAAACAAGTTGTTCTACGATATGTCAATAAA-TGATGCA 306
| ||||| |||||||||| ||| ||| || |||||| | | || | ||| | ||| |
Sbjct 268 ATGAATCCAGTGGAAGCTG--CAA-CAA-TT-TTCTAC-ACAC-TCTA-AAACTAATGGA 319
Query 307 TTGAGT-ATTAGA-GAAAAGTATCAGCCAAAATGTGGAGATCTTATTGCTTTGAC-AAAG 363
| ||| | | || | |||||| |||||| | ||||||||||| |||||| | || |||
Sbjct 320 TGGAGAGAAT-GATGCAAAGTACCAGCCACATTGTGGAGATCTCATTGCTCTCACGAAAA 378
Query 364 GAAAGGCCTAGAGGAGTC-GATGACTTGAATCCTTTACTTCTTGGTTCTATTTCTGTTGA 422
||| || ||| | || | ||||||||| || || ||||||| | | ||||||| ||
Sbjct 379 CAAAA-CCAAGAAGTTTCCG-TGACTTGAACCCGTTGCTTCTTGCCTATGTTTCTGTGGA 436
Query 423 TACTTATCC-AAATATCT 439
|| | |||| ||| ||||
Sbjct 437 TAATCATCCCAAA-ATCT 453
> Ahg891304 jgi|Araly1|891304|Al_scaffold_0007_3290
Length=2457
Score = 1016 bits (550), Expect = 0.0
Identities = 758/858 (88%), Gaps = 15/858 (2%)
Strand=Plus/Plus
Query 1049 TTCTTGTGGTTGATGAGGCAGCTCAGCTTAAAGAATGTGAATCAGTTGCTGCATTGCAAC 1108
||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct 1526 TTCTTGTGGTTGATGAGGCGGCTCAGCTTAAAGAATGTGAATCAGTTGCTGCTTTGCAAC 1585
Query 1109 TTCCTGGACTACGTCACGCCATTCTAATAGGAGATGAGTTTCAGTTACCTGCAATGGTTC 1168
|| ||||||| ||||| || |||| |||||||||||| ||||||| |||||||| | |
Sbjct 1586 TTTCTGGACTTCGTCATGCTGTTCTTATAGGAGATGAGCTTCAGTTGCCTGCAAT-GAT- 1643
Query 1169 ATAAC-GATCAATGCGAGAAGGCGAAATTCGGAAGAAGCTTGTTCGAGAGATTGGTTCTG 1227
| | ||| ||| || ||||| ||||||||||| || ||||||||||| |||||||||
Sbjct 1644 GTGGCAGAT--ATGTGAAAAGGCAAAATTCGGAAGCAGTTTGTTCGAGAGGTTGGTTCTG 1701
Query 1228 CTTGGTCATAAAAAGCATTTGCTTGATGTTCAGTACCGAATGCATCCTTCGATTAGTCGT 1287
|||||||| || |||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct 1702 CTTGGTCACAACAAGCATTTGCTTAATGTTCAATACCGAATGCATCCTTCGATTAGTCGT 1761
Query 1288 TTCCCTTATAAAGAGTTTTATGGTGGGAGAATCAAAGATGCTGCAAATGTTCAAGAAAGT 1347
|||||| |||||||||| |||||||||| ||||||||||||||| ||||||||||||||
Sbjct 1762 TTCCCTAATAAAGAGTTCTATGGTGGGAAAATCAAAGATGCTGCGAATGTTCAAGAAAGC 1821
Query 1348 ATTTATCAAAAGAGGTTTCTTCAAGGAAACATGTTTGGCTCATTT-TCTTTTATCAATGT 1406
|||||||||||||||||||||||||| ||||||||||| || ||| ||||||||||||||
Sbjct 1822 ATTTATCAAAAGAGGTTTCTTCAAGGGAACATGTTTGGTTC-TTTCTCTTTTATCAATGT 1880
Query 1407 TGGACGTGGAAAAGAAGAGTTTGGTGATGGAGATAGTCCCAAGAACATGGTTGAAGTTGC 1466
||||| |||| |||||||||||||||||||| ||||||| || |||||||||||||||||
Sbjct 1881 TGGACTTGGAGAAGAAGAGTTTGGTGATGGACATAGTCCTAAAAACATGGTTGAAGTTGC 1940
Query 1467 TGTGGTTTCTGAAATCATATCAAATCTTTTCAAAGTTTCTAGGGAAAGAAAGA-TGAAA- 1524
|||| |||||||||||||||||||||||||||||||||| || ||||||| || | |||
Sbjct 1941 TGTGATTTCTGAAATCATATCAAATCTTTTCAAAGTTTCAAGTGAAAGAA-GAAT-AAAG 1998
Query 1525 ATGAGTGTTGGAGTGATTACTCCTTACAAAGGACAAGTTAGAGCAATCCAAGAGAGAATC 1584
||||| ||||||||| || |||| |||||||||||||| ||||||||||||||||||| |
Sbjct 1999 ATGAGCGTTGGAGTGGTTTCTCCATACAAAGGACAAGTCAGAGCAATCCAAGAGAGAACC 2058
Query 1585 AGAGATAAGTACAGTTCCTTATCAGGTGAGCTTTTCACTGTGAATGTTCGGTCTGTAGAT 1644
| | |||||||||| || ||||||||||||||||||||| ||||||||||||| ||||||
Sbjct 2059 AAAAATAAGTACAGCTCTTTATCAGGTGAGCTTTTCACTTTGAATGTTCGGTCGGTAGAT 2118
Query 1645 GGGTTTCAAGGTGGTGAAGAAGACATTATCATCATCTCTACCGTTAGAAGTAATAGTAAC 1704
|||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||
Sbjct 2119 GGGTTTCAAGGTGGGGAAGAAGATGTTATCATCATCTCTACCGTTAGAAGTAACGGTAAT 2178
Query 1705 GGGAAGGTTGGATTTCTCAGTAACCGTCAAAGAGCCAATGTGGCACTCACTCGAGCTAGG 1764
|| || || |||||||||| |||||||||||||||||||||||||| |||||||| |||
Sbjct 2179 GGAAAAGTGGGATTTCTCAACAACCGTCAAAGAGCCAATGTGGCACTTACTCGAGCAAGG 2238
Query 1765 CACTGTTTATGGGTGATTGGAAATGAGTCAACACTGGCTCGGAGTGGTTCGATTTGGGC- 1823
|| |||||||||||| |||| |||||| |||| |||||| |||||||||||||||||
Sbjct 2239 CATTGTTTATGGGTGGTTGGTAATGAGACAACTTTGGCTCTAAGTGGTTCGATTTGGGCT 2298
Query 1824 AAACCTTATAAGTGACTCGAAGAGACGTAAATGCTTCTATGATGCTAAAGATGATAAGAG 1883
|||| | |||||||| || | || |||| ||| ||||||||||||| ||||| ||||
Sbjct 2299 AAAC-TGATAAGTGAGTCTAGGACACGTGGATGTTTCTATGATGCTACTGATGAGAAGA- 2356
Query 1884 AT-TGAGAGATGCCATGA 1900
|| | |||||| ||||||
Sbjct 2357 ATCTAAGAGATTCCATGA 2374
Score = 315 bits (170), Expect = 1e-84
Identities = 378/472 (80%), Gaps = 39/472 (8%)
Strand=Plus/Plus
Query 582 TGTTTTGGATATAATCCGTTCAT-CAAAATTGAACTCTTCACAAGAAGCTGCAATCTTGA 640
||||| ||||||||||||||| | | ||| |||||||||| |||||||||||||||||||
Sbjct 576 TGTTTCGGATATAATCCGTTC-TGCGAAACTGAACTCTTCCCAAGAAGCTGCAATCTTGA 634
Query 641 GCTGCCTTGAGACAA-GAGA-TAGTAATCACAAGAACAGTGTGAAACTCATATGGGGACC 698
|||||||| |||||| || | | ||| ||||||| |||||||||| || |||||||||||
Sbjct 635 GCTGCCTTAAGACAAGGA-ACT-GTATTCACAAGCACAGTGTGAAGCTGATATGGGGACC 692
Query 699 T-C---T--T---AAGACAAAGACGGTCGCTACTCTTCTCCTTGT-CCTTCTCAAGCTAA 748
| | | | || |||||||||||||| |||||||| ||| | ||||||||||||||
Sbjct 693 TCCTGGTACTGGCAAAACAAAGACGGTCGCAACTCTTCT-CTTTTGCCTTCTCAAGCTAA 751
Query 749 GGTGCAAAACAGTTGTGTGTGCTCCTACAAACACAGCTATTGTAGAAGTAACATCAAGGC 808
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 752 AGTGCAAAACAGTTGTGTGTGCTCCTACAAACACAGCTATTGTAGAAGTAACATCGAGGC 811
Query 809 T-ATTGGCTTTATCGAAT-AAA-TA-TTCA---GAACATGCCACTTATGG-CTTGGGGAA 860
|| | | |||| || ||| | |||| |||||| | |||||||| || ||||||
Sbjct 812 CCAT-GTCCTTATTTAAGGAAACTTCTTCACCAGAACATTCTACTTATGGGCT-GGGGAA 869
Query 861 TAtttttttAGCTGGAAACCAAAAAAGAATGAGGATCAAAGATACTGAT-TATCTTCGTA 919
|||| || | ||||||||| ||||| |||| ||||| | |||| | ||||| |
Sbjct 870 TATTGTTCTCTCTGGAAACCGGGCTCGAATGGGGATTAAAGAGAATGATGT-TCTTC-TC 927
Query 920 -ATGTCTTTCTTGATCATCGTATAAGCAA-ACTTCG-TAAACTGTTTTTATCTACTTGTG 976
|||| ||||||||| | || || | || ||| || ||| ||||||| | | |||| ||
Sbjct 928 GATGTGTTTCTTGATGAGCGCATTGG-AATACT-CGCTAACCTGTTTTCACCAACTTCTG 985
Query 977 GATGGAAGCAGAGTTTGGAGTCAATCAT-AGATCTT-CTTGAAAACACAGAG 1026
||||||||||||| || |||||| | || | | ||| ||||| || ||||||
Sbjct 986 GATGGAAGCAGAGATTAGAGTCACTGATCA-A-CTTTCTTGAGAATACAGAG 1035
Score = 300 bits (162), Expect = 3e-80
Identities = 267/316 (84%), Gaps = 13/316 (4%)
Strand=Plus/Plus
Query 94 AAGACTATACCAGACAAGTTTAGTTCCGTTAATGAATA-CTTGAAGTGTTTTGTTCCTCA 152
||||| |||||||||| |||||| || ||| ||||||| ||| ||||||||||||||||
Sbjct 4 AAGACAATACCAGACAGGTTTAGATCTGTTGATGAATACCTT-CAGTGTTTTGTTCCTCA 62
Query 153 TCTACTGGAGGAAACGCGAACCGAGTTGTCCACAAGCTTCAAATCTTTGTCAAAAGCTCA 212
|||||| |||||||| || |||||||||| | |||||||||||||| ||||||||||
Sbjct 63 TCTACTTGAGGAAACACGGACCGAGTTGTTTTCTAGCTTCAAATCTTTATCAAAAGCTCC 122
Query 213 TCTCTTTGAAATTA-GTTCCTTGGAGACAATGACAAAGGAATCAAGTGGAAGCTTATCAA 271
| ||||| ||| || ||||| | | | | |||||||||| |||||||||||| |||||
Sbjct 123 TGTCTTTCAAA-TATGTTCCGT-G-G---A-GACAAAGGAAGCAAGTGGAAGCTCATCAA 175
Query 272 ACAAGTTGTTCTACGATATGTCAATAAATGATGCATT--G-AGTATTAGAGAAAAGTATC 328
||||||| ||||||||||| ||||| | ||||||| | | |||| | | ||| ||||
Sbjct 176 ACAAGTTCTTCTACGATATAAAAATAAGTAATGCATTGGGTACTATTGGTGCAAACTATC 235
Query 329 AGCCAAAATGTGGAGATCTTATTGCTTTGACAAAGGAAAGGCCTAGAGGAGTCGATGACT 388
|||||||||||||||||||||||||| | |||||||||||||| ||| || |||||||||
Sbjct 236 AGCCAAAATGTGGAGATCTTATTGCTCTAACAAAGGAAAGGCCAAGACGAATCGATGACT 295
Query 389 TGAATCCTTTACTTCT 404
||||||||||||||||
Sbjct 296 TGAATCCTTTACTTCT 311
> Ahg493692 jgi|Araly1|493692|fgenesh2_kg.7__3125__AT5G37160.1
Length=2604
Score = 942 bits (510), Expect = 0.0
Identities = 747/861 (87%), Gaps = 18/861 (2%)
Strand=Plus/Plus
Query 1049 TTCTTGTGGTTGATGAGGCAGCTCAGCTTAAAGAATGTGAATCAGTTGCTGCATTGCAAC 1108
|||| ||||| |||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct 1670 TTCTCGTGGTCGATGAGGCAGCTCAGCTTAAAGAATGTGAATCAGTTACCGCATTGCAAC 1729
Query 1109 TTCCTGGACTACGTCACGC-CATTCTAATAGGAGATGAGTTTCAGTTACCTGCAATGGTT 1167
|||||||||| ||||| || | |||||||||||||||||| |||||||||||||||||||
Sbjct 1730 TTCCTGGACTTCGTCATGCGC-TTCTAATAGGAGATGAGTATCAGTTACCTGCAATGGTT 1788
Query 1168 CATAACGATCAATGCGAGAAGGCGAAATTCGGAAGAAGCTTGTTCGAGAGATTGGTTCTG 1227
|| | | | ||||||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1789 CACAGCAAGGAATGCGAAAAGGCGAAATTCGGAAGAAGCTTGTTCGAGAGATTGGTTTTG 1848
Query 1228 CTTGGTCATAA-AAAGCATTTGCTTGATGTTCAGTACCGAATGCATCCTTCGATTAGTCG 1286
|||||||||| ||| |||||||| ||||||| || || |||||||||||||||||| |
Sbjct 1849 ATTGGTCATAACAAA-CATTTGCTAAATGTTCAATATCGGATGCATCCTTCGATTAGTTG 1907
Query 1287 TTTCCCTTATAAAGAGTTTTATGGTGGGAGAATCAAAGATGC-TGCAAATGTTCAAGAAA 1345
||||||| |||| |||||||||| ||||||||||| ||||| | | | ||||||||||
Sbjct 1908 TTTCCCTAATAAGGAGTTTTATGATGGGAGAATCACTGATGCAT-CGATTGTTCAAGAAC 1966
Query 1346 GTATTTATC-AAAAGAGGTTTCTTCAAGGAAACATGTTTGGCTCATTT-TCTTTTATCAA 1403
| ||||| | ||||| |||||||||| ||||| |||||||| || ||| |||||||||||
Sbjct 1967 GCATTTA-CGAAAAGCGGTTTCTTCAGGGAAAAATGTTTGGTTC-TTTCTCTTTTATCAA 2024
Query 1404 TGTTGGACGTGGAAAAGAAGAGTTTGGTGATGGAGATAGTCCCAAGAACATGGTTGAAGT 1463
||| |||||||| |||||||||||| |||||||| ||||||| ||||| |||||||||||
Sbjct 2025 TGTGGGACGTGGGAAAGAAGAGTTTTGTGATGGACATAGTCCTAAGAATATGGTTGAAGT 2084
Query 1464 TGCTGTGGTTTCTGAAATCATATCAAATCTTTTCAAAGTTTCTAGGGAAAGAAAG-ATGA 1522
|||||| |||| ||||||||||| ||||||||||||||||| || |||||| | ||
Sbjct 2085 TGCTGTCATTTCCGAAATCATATCCAATCTTTTCAAAGTTTCAAGTCTAAGAAACCA-GA 2143
Query 1523 AAATGAGTGTTGGAGTGATTACTCCTTACAAAGGACAAGTTAGAGCAATCCAAGAGAGAA 1582
| |||||||||||||||||| | |||||||| |||||||| ||||| |||||||||||||
Sbjct 2144 AGATGAGTGTTGGAGTGATTTCACCTTACAAGGGACAAGTGAGAGCTATCCAAGAGAGAA 2203
Query 1583 TCAGAGATAAGTACAGTTCCTTATCAGGTGAGCTTTTCACTGTGAATGTTCGGTCTGTAG 1642
| | ||||||||| |||||||||||||| ||||||||||| ||||||||| || ||||
Sbjct 2204 TTGGTGATAAGTACGGTTCCTTATCAGGTCAGCTTTTCACTTTGAATGTTCAATCGGTAG 2263
Query 1643 ATGGGTTTCAAGGTGGTGAAGAAGACATTATCATCATCTCTACCGTTAGAAGTAATAGT- 1701
||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||
Sbjct 2264 ATGGGTTTCAAGGAGGAGAAGAAGACATTATCATCATCTCTACCGTTAGAAGTAAC-GTT 2322
Query 1702 AACGGGAAGGTTGGATTTCTCAGTAACCGTCAAAGAGCCAATGTGGCACTCACTCGAGCT 1761
|| || || || |||||||| ||||||| ||||||||||||||||||||| ||||| ||
Sbjct 2323 AATGGAAACGTGGGATTTCTAAGTAACCATCAAAGAGCCAATGTGGCACTGACTCGTGCA 2382
Query 1762 AGGCACTGTTTATGGGTGATTGGAAATGAGTCAACACTGGCTCGGAGTGGTTCGATTTGG 1821
|| || ||||||||||||||||| || ||| | || |||||| |||||||||||||||
Sbjct 2383 AGACATTGTTTATGGGTGATTGGTAACGAGACCACTTTGGCTCTAAGTGGTTCGATTTGG 2442
Query 1822 GCA-AACCTTATAAGTGACTCGAAGAGACGTAAATGCTTCTATGATGCTAAAGATGATAA 1880
||| ||| |||||||||| |||| || |||| ||||||||| |||||| ||||||||
Sbjct 2443 GCAGAAC-TTATAAGTGAGTCGAGGACACGTGGATGCTTCTACGATGCTGTTGATGATAA 2501
Query 1881 GAGAT-TGAGAGATGCCATGA 1900
|| || | |||||||||||||
Sbjct 2502 GA-ATCTAAGAGATGCCATGA 2521
Score = 217 bits (117), Expect = 3e-55
Identities = 209/251 (83%), Gaps = 16/251 (6%)
Strand=Plus/Plus
Query 582 TGTTTTGGATATAATCCGTTCATCAAAATTGAACTCTTCACAAGAAGCTGCAA-TCTTGA 640
||||||||||| ||| |||||| ||||| |||||||||| ||||||||||||| | |||
Sbjct 681 TGTTTTGGATAGAATTCGTTCAGCAAAACTGAACTCTTCCCAAGAAGCTGCAATTTTTG- 739
Query 641 GCTGCCTTGAGACAA-GAGATAGTAATCACAAGAACAGTGTGAAACTCATATGGGGACCT 699
| |||||| |||||| || || ||||||||||||| ||||||||||| ||||||||||||
Sbjct 740 GTTGCCTTAAGACAAGGA-ATTGTAATCACAAGAAGAGTGTGAAACTGATATGGGGACCT 798
Query 700 -CTTAAG-ACAAAGAC--G--GTCGCTACTCTTCTCCT-TGTC-CTTCT-CAAGCTAAGG 750
|| || | ||| || | || | |||||||| || || | ||| | ||| |||| |
Sbjct 799 CCTGGAGCAAAAACACAAGATATCACGACTCTTCT-CTCTG-CTCTTATCCAA-CTAAAG 855
Query 751 TGCAAAACAGTTGTGTGTGCTCCTACAAACACAGCTATTGTAGAAGTAACATCAAGGCTA 810
||||||||||||||||||||||||||||||||||||||||| | ||| |||| ||| ||
Sbjct 856 TGCAAAACAGTTGTGTGTGCTCCTACAAACACAGCTATTGTTGCAGTTGCATCGAGGTTA 915
Query 811 TTGGCTTTATC 821
|||||||||||
Sbjct 916 TTGGCTTTATC 926
> Ahg355656 jgi|Araly1|355656|fgenesh1_pg.C_scaffold_7002829
Length=2487
Score = 813 bits (440), Expect = 0.0
Identities = 553/608 (91%), Gaps = 5/608 (1%)
Strand=Plus/Plus
Query 1032 GACTGGAAATATAGAAGTTCTTGTGGTTGATGAGGCAGCTCAGCTTAAAGAATGTGAATC 1091
||| |||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||
Sbjct 1611 GACAGGAAATATAGAACTTCTTGTGGTTGATGAGGCCGCTCAGCTTAAGGAATGTGAATC 1670
Query 1092 AGTTGCTGCATTGCAACTTCCTGGACTACGTCACGCCATTCTAATAGGAGATGAGTTTCA 1151
||||||||||||||||||| ||||| | |||||||||| |||||||||||||||||||
Sbjct 1671 AGTTGCTGCATTGCAACTTAAGGGACTGCATCACGCCATTTTAATAGGAGATGAGTTTCA 1730
Query 1152 GTTACCTGCAATGGTTCATAACGATCA-ATGCGAGAAGGCGAAATTCGGAAGAAGCTTGT 1210
|| ||||||||||| ||||| || | || || |||||||||||||||||||||||||
Sbjct 1731 ATTGCCTGCAATGGTACATAATGA-GATGTGTGAAAAGGCGAAATTCGGAAGAAGCTTGT 1789
Query 1211 TCGAGAGATTGGTTCTGCTTGGTCATAA-AAAGCATTTGCTTGATGTTCAGTACCGAATG 1269
| || ||||||||| ||||||||||||| ||| ||||||||||||||||| || ||||||
Sbjct 1790 TTGAAAGATTGGTTTTGCTTGGTCATAACAAA-CATTTGCTTGATGTTCAATATCGAATG 1848
Query 1270 CATCCTTCGATTAGTCGTTTCCCTTATAAAGAGTTTTATGGTGGGAGAATCAAAGATGCT 1329
|||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct 1849 CATCCTTCGATTAGTCGTTTCCCTAATAAAGAGTTCTATGGTGGGAGAATCAAAGATGCT 1908
Query 1330 GCAAATGTTCAAGAAAGTATTTATCAAAAGAGGTTTCTTCAAGGAAACATGTTTGGCTCA 1389
|| |||||||||||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct 1909 GCGAATGTTCAAGAAAGCATCTATCAAAAGAGGTTTCTTCAAGGAAACATGTTTGGTTCA 1968
Query 1390 TTTTCTTTTATCAATGTTGGACGTGGAAAAGAAGAGTTTGGTGATGGAGATAGTCCCAAG 1449
|| || |||||||||||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct 1969 TTCTCCTTTATCAATGTTGGACGTGGAAAAGAGGAGTTTGGTGATGGACATAGTCCCAAG 2028
Query 1450 AACATGGTTGAAGTTGCTGTGGTTTCTGAAATCATATCAAATCTTTTCAAAGTTTCTAGG 1509
|||||||||||||||||||| |||||||||| ||||| ||||||||||||||||| ||
Sbjct 2029 AACATGGTTGAAGTTGCTGTCATTTCTGAAATAATATCCAATCTTTTCAAAGTTTCAAGT 2088
Query 1510 GAAAGAAAGATGAAAATGAGTGTTGGAGTGATTACTCCTTACAAAGGACAAGTTAGAGCA 1569
||||||| |||||| ||||||||||||||| || | ||||| ||||||||||| ||||||
Sbjct 2089 GAAAGAAGGATGAAGATGAGTGTTGGAGTGGTTTCACCTTATAAAGGACAAGTGAGAGCA 2148
Query 1570 ATCCAAGAGAGAATCAGAGATAAGTACAGTTCCTTATCAGGTGAGCTTTTCAC-TGTGAA 1628
||||||||||||||| |||||||||||||||||||||||||| | |||||||| | ||||
Sbjct 2149 ATCCAAGAGAGAATCGGAGATAAGTACAGTTCCTTATCAGGTCAACTTTTCACGTTTGAA 2208
Query 1629 TGTTCGGT 1636
||||||||
Sbjct 2209 TGTTCGGT 2216
Score = 318 bits (172), Expect = 8e-86
Identities = 372/464 (80%), Gaps = 32/464 (7%)
Strand=Plus/Plus
Query 582 TGTTTTGGATATAATCCGTTCATCAAAATTGAACTCTTCACAAGAAGCTGCAATCTTGAG 641
|||||||||||||||||||||| | |||||||||||||| ||||| |||||||||||| |
Sbjct 672 TGTTTTGGATATAATCCGTTCAACGAAATTGAACTCTTCCCAAGAGGCTGCAATCTTGGG 731
Query 642 CTGCCTTGAGACAAGAGA-TAGTAATCACAAGAACAGTGTGAAACTCATATGGGGACCT- 699
||||||||||||||| | | ||||||| ||||| ||||||||| | || |||||||||
Sbjct 732 GTGCCTTGAGACAAGAAAGT-GTAATCATAAGAATAGTGTGAAATTGATTTGGGGACCTC 790
Query 700 CT--TA-A-G----ACAAAGACGGTCGCTACTCTTCTCCTTGT-CCTTCTCAAGCTAAGG 750
|| | | | |||||||||||||| |||||||| ||||| ||||||||| ||||||
Sbjct 791 CTGGAACAGGCAAAACAAAGACGGTCGCGACTCTTCT-CTTGTCCCTTCTCAAACTAAGG 849
Query 751 TGCAAAACAGTTGTGTGTGCTCCTACAAACACAGCTATTGTAGAAGTAACATCAAGGCTA 810
|| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct 850 TGTAAAACAGTTGTGTGTGCTCCTACAAACACAGCTATTGTACAAGTTGCATCAAGGCTC 909
Query 811 TTGGCTTTATCGAAT-AAA-TA-TTCAG-A-A-CATGCCACTTAT-GGCTTGGGGAATAt 863
||| || ||| || ||| | |||| | | ||||| ||||| |||| ||| |||||
Sbjct 910 TTGTCTGTATTTAAGGAAAATTGTTCATCAGAGCATGCTACTTACAGGCTAGGG-AATAT 968
Query 864 ttttttAGCTGGAAACCAAAAAAGAATGAGGATCAA-A-GATACTGATTAT--C-TTCGT 918
| || || ||||||||| | |||||| |||| || | || || ||| || | ||| |
Sbjct 969 TGTTCTATCTGGAAACCGGGACAGAATGGGGATTAACAAGA-AC-GATCATGTCCTTCTT 1026
Query 919 AATGTCTTTCTTGATCATCGTATAAGCAAACTTCGTAAACTGTTTTTATCTACTTG-TGG 977
|||| ||||||||| | ||||| | || ||| |||||||||||| | | | || |||
Sbjct 1027 GATGTGTTTCTTGATGAGCGTATTGGTAAGCTTGGTAAACTGTTTTCACC-ATTTTCTGG 1085
Query 978 ATGGAAGCAGAGTTTGGAGTCAATCATAGA-TCTTCTTGAAAAC 1020
||||| |||||| || |||||| | ||| | | |||||||||||
Sbjct 1086 ATGGATGCAGAGATTAGAGTCACTGATACAGT-TTCTTGAAAAC 1128
> Ahg895489 jgi|Araly1|895489|Al_scaffold_0006_3485
Length=2448
Score = 667 bits (361), Expect = 0.0
Identities = 651/792 (82%), Gaps = 15/792 (2%)
Strand=Plus/Plus
Query 1042 ATAGAAGTTCTTGTGGTTGATGAGGCAGCTCAGCTTAAAGAATGTGAATCAGTTGCTGCA 1101
|||||| ||||||| ||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 1657 ATAGAACTTCTTGTAGTTGACGAGGCGGCTCAGCTTAAAGAATGTGAATCAGTTGCTGCA 1716
Query 1102 TTGCAACTTCCTGGACTACGTCACGCCATTCTAATAGGAGATGAGTTTCAGTTACCTGCA 1161
|||||| ||| || | | || || ||||||||||||||||| ||||| |||| |||
Sbjct 1717 TTGCAAATTCAGGGTTTGCACCATGCTGTTCTAATAGGAGATGAGCTTCAGCTACCAGCA 1776
Query 1162 ATGGTTCATAA-CGATCAATGCGAGAAGGCGAAATTCGGAAGAAGCTTGTTCGAGAGATT 1220
||||| || || ||| ||| |||||||| ||||| || ||||||||||| ||||||||
Sbjct 1777 ATGGTGCA-AAGCGAGGTATGTGAGAAGGCCAAATTTGGGAGAAGCTTGTTTGAGAGATT 1835
Query 1221 GGTTCTGCTTGGTCATAA-AAAGCATTTGCTTGATGTTCAGTACCGAATGCATCCTTCGA 1279
|||| ||||||| || || ||| ||||||||| ||||||| || || |||||| |||| |
Sbjct 1836 GGTTTTGCTTGGCCACAAGAAA-CATTTGCTTAATGTTCAATATCGTATGCATACTTCTA 1894
Query 1280 TTAGTCGTTTCCCTTATAAAGAGTTTTATGGTGGGA-GAATCAAAGATGCTGCAAAT-GT 1337
| || | |||||| | | |||||||||| ||| | || || ||||||| | || ||
Sbjct 1895 TAAGCCTTTTCCCCAACATGGAGTTTTATGATGGTAAGA-TCTCTGATGCTG-AGATTGT 1952
Query 1338 TCAAGAAAGTATTTATCAAAAGAGGTTTCTTCAAGGAAACATGTTTGGCTCATTT-TCTT 1396
| ||||||| | ||||||||| ||||||||| ||||||||||||||| || ||| || |
Sbjct 1953 TAAAGAAAGCACCTATCAAAAGCGGTTTCTTCGAGGAAACATGTTTGGTTC-TTTCTCCT 2011
Query 1397 TTATCAATGTTGGACGTGGAAAAGAAGAGTTTGGTGATGGAGATAGTCCCAAGAACATGG 1456
||||||| || |||| ||| ||||||||||||||||||||| | ||||| || |||||||
Sbjct 2012 TTATCAACGTGGGACTTGGGAAAGAAGAGTTTGGTGATGGACACAGTCCTAAAAACATGG 2071
Query 1457 TTGAAGTTGCTGTGGTTTCTGAAATCATATCAAATCTTTTCAAAGTTTCTAGGGAAAG-A 1515
|||| ||||||||||||||||| ||| |||| |||||| ||||||| || || || | |
Sbjct 2072 TTGAGGTTGCTGTGGTTTCTGAGATCTTATCCAATCTTCTCAAAGTGTCCAGTGAG-GCA 2130
Query 1516 AAGATGAAAATGAGTGTTGGAGTGATTACTCCTTACAAAGGACAAGTTAGAGCAATCCAA 1575
|||| ||| ||||||||||| || ||| | ||||| |||| ||||||||||||||||||
Sbjct 2131 AAGACGAAGATGAGTGTTGGTGTTATTTCACCTTATAAAGCTCAAGTTAGAGCAATCCAA 2190
Query 1576 GAGAGAATCAGAGATAAGTACAGTTCCTTATCAGGTGAGCTTTTCACTGTGAATGTTCGG 1635
||||| ||| |||||||||||| ||| |||||| | ||||||||||| |||||||||||
Sbjct 2191 GAGAGGATCGGAGATAAGTACACCTCCGTATCAGATCAGCTTTTCACTTTGAATGTTCGG 2250
Query 1636 TCTGTAGATGGGTTTCAAGGTGGTGAAGAAGACATTATCATCATCTCTACCGTTAGAAGT 1695
|| || |||||||||||||| || |||||||| || || ||||| || ||||||||||
Sbjct 2251 TCCGTGGATGGGTTTCAAGGAGGAGAAGAAGATATCATTATCATATCCACCGTTAGAAAC 2310
Query 1696 AATAGTAACGGGA-AGGTTGGATTTCTCAGTAACCGTCAAAGAGCCAATGTGGCACTCAC 1754
|| ||||||| | | | || |||||| |||||||||||||||||| || ||||| ||
Sbjct 2311 AACGGTAACGG-ACACATAGGGTTTCTCTCTAACCGTCAAAGAGCCAACGTTGCACTGAC 2369
Query 1755 TCGAGCTAGGCACTGTTTATGGGTGATTGGAAATGAGTCAACACTGGCTCGGAGTGGTTC 1814
||| || ||||||||||||||||||||||| || ||| ||| || | | |||||||||
Sbjct 2370 TCGTGCAAGGCACTGTTTATGGGTGATTGGGAACGAGAGAACTTTGTCGCTGAGTGGTTC 2429
Query 1815 GATTTGGGCAAA 1826
|||| || ||||
Sbjct 2430 GATT-GGACAAA 2440
Score = 252 bits (136), Expect = 8e-66
Identities = 425/556 (76%), Gaps = 53/556 (10%)
Strand=Plus/Plus
Query 498 CAACTTTGATCTCATCCAGAGTGTTCTTCAGCCAAATACTGCGGGTATGGAGCCA-ATTG 556
|||||| | ||||||| ||||||| |||||| ||||||| |||| || ||| || ||
Sbjct 564 CAACTTGGGTCTCATCAAGAGTGTCCTTCAGGCAAATACCGCGGATACAGAG-CACCCTG 622
Query 557 TTTCTTCTA-GAACTT-GGGGACAAAATGTTTTGGATATAATCCGTTCAT-CAAAATTGA 613
||||||||| ||| || ||||| | | ||| | |||||| || ||||| | |||| ||||
Sbjct 623 TTTCTTCTAGGAA-TTGGGGGA-ATAGTGTATGGGATATTATGCGTTC-TGCAAAGTTGA 679
Query 614 ACTCTTCACAAGAAGCTGCAATCTTGAGCTGCCTT-GAGACAAGAGATAGTA-ATCACAA 671
|| |||| || ||| ||||||| ||||| || ||| ||||||||| || || | ||||
Sbjct 680 ACCCTTCTCAGGAATCTGCAATTTTGAGTTG-CTTGGAGACAAGAAAT-TTACGTGACAA 737
Query 672 GAAC-AGTGTGAAACTCATATGGGGACC-TCT--T------AAGACAAAGACGGTCGCTA 721
| || ||||||||||| || |||||||| || | |||||||| || || ||||
Sbjct 738 G-ACTAGTGTGAAACTGATTTGGGGACCACCTGGTACCGGCAAGACAAAAACAGTTGCTA 796
Query 722 CTCTTCTCCTTGTC-CTTCTCAAGCTAAGGTGCAAAACAGTTGTGTGTGCTCCTACAAAC 780
||||||| ||| | |||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 797 CTCTTCTGTTTG-CTCTTCTCAACCTAAGTTGCAAAACAGTTGTGTGTGCTCCTACAAAC 855
Query 781 ACAGCTATTGTAGAAGTAACATCAAGGCTATTGGCTTTATCGAAT-AAA-TA-TTCA--- 834
|| ||| | |||||||| |||| ||||| ||||| |||| || ||| | ||||
Sbjct 856 ACGGCTGTAGTAGAAGTTGCATCGAGGCTCTTGGCGTTATTTAAGGAAACTTCTTCATCA 915
Query 835 GAACATGCCACTTATGG-CTTGGGGAATAtttttttAG-CTGGAAACCAAAAAAGAATGA 892
|||||| | ||||| || |||||| |||||| |||||| | ||||||| | |||||
Sbjct 916 GAACATTCTACTTACGGGCTTGGG-AATATTGTTTTAGTC-GGAAACCGAGTCCGAATGG 973
Query 893 GGATC-A--A-AGAT--ACTGATTATCTTCGT-AATGTCTTTCTTGATCATCGTATAAGC 945
|||| | | || | |||| |||| | | || || |||||||| ||||| || ||
Sbjct 974 GGATAGACGACAGGGGGAATGATGATCTCC-TCAACGTGTTTCTTGAACATCGAATTAGT 1032
Query 946 AAACTT-CGTAAACTGTTTTT---ATCTACTTGTGGATGG-AAGCAGAGTTTGGAGTCAA 1000
|| || ||||||||||||| ||| ||| | | |||| || | ||||||||||||||
Sbjct 1033 AAG-TTGCGTAAACTGTTTTCGCCATCGACT-G-G-ATGGGAA-CGGAGTTTGGAGTCAA 1087
Query 1001 TCATAGATCTTCTTGA 1016
|||| ||| |||||||
Sbjct 1088 TCATCGATATTCTTGA 1103
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 72028653295
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5