BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G37060.1 Length=2580 Score E Sequences producing significant alignments: (Bits) Value Ahg330263 jgi|Araly1|330263|fgenesh1_pm.C_scaffold_7002490 3541 0.0 Ahg495963 jgi|Araly1|495963|fgenesh2_kg.8__1779__AT5G58460.1 2484 0.0 > Ahg330263 jgi|Araly1|330263|fgenesh1_pm.C_scaffold_7002490 Length=2586 Score = 3541 bits (1917), Expect = 0.0 Identities = 2379/2601 (91%), Gaps = 36/2601 (1%) Strand=Plus/Plus Query 1 ATGGTTAGGCACTTCCCCATCAAT---GACCAGAGTCTCCTGCCTGCCCATTTTGGGTTC 57 ||||||||||| |||||||||||| ||||||||| |||||||| ||||||||||||| Sbjct 1 ATGGTTAGGCATTTCCCCATCAATGACGACCAGAGTGTCCTGCCTACCCATTTTGGGTTT 60 Query 58 TGGCCGGGTAACTCAACCACACCC-GGAGAGGTCAGC-AATCGTGTTTTCTCTCCCAAAA 115 ||||||||||| |||||||| ||| |||||||||| | | |||||| |||||||||||| Sbjct 61 TGGCCGGGTAATTCAACCAC-CCCGGGAGAGGTCA-CTAGTCGTGTCTTCTCTCCCAAAC 118 Query 116 TTCCGGTGGTTTGCCGGAAACTTCATAGTAAGCAGCCGTTTGGAATGTTCAAAGGCGAAA 175 |||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||| Sbjct 119 TTCCGGTGGTATGCCGGCAACTTCATAGTAAGCAACCGTTTGGAATGTTCAAAGGCGAAA 178 Query 176 ATGCTATGAACTACGCATTTTCGACCTTTTTGATCGAAGCAATCATCATCATTTTCTTCA 235 |||| |||||||| ||||||||||| ||||| ||||||||||||||||||||||||| || Sbjct 179 ATGCGATGAACTATGCATTTTCGACTTTTTTAATCGAAGCAATCATCATCATTTTCTGCA 238 Query 236 TCAAAGTT-GTTAGCATT-GCCCTTCGACCTTTTCGCCAACCTCGTATAGTCAGTGAGAT 293 ||||| || ||||| || | |||||||||| |||||||||||||||||||||| ||||| Sbjct 239 TCAAA-TTCGTTAG-TTTCGTCCTTCGACCTCTTCGCCAACCTCGTATAGTCAGCGAGAT 296 Query 294 CATTGGTGGAATGATGATAGGACCATCGATGTTTGGAGGAATCAGAAATTTCAATTACTA 353 ||||||||||||||||||||||||||| ||| ||||||||| | |||||||||||||||| Sbjct 297 CATTGGTGGAATGATGATAGGACCATCAATGCTTGGAGGAAGCCGAAATTTCAATTACTA 356 Query 354 TTTATTCCCACCAATTGCGAATTACATATGCGCAAACATAGGACTGATGGGGtttttttA 413 | | |||||||| || ||||| ||||||||||||||||||||||| ||||| || || || Sbjct 357 TCTGTTCCCACCGATCGCGAACTACATATGCGCAAACATAGGACTAATGGGATTCTTCTA 416 Query 414 CTTCCTCTTCCTCACGGCGGCCAAGACGGACGTTGGAGCCATTGGGAAG-GCACCAAGAA 472 |||||||||||||||||| || |||||||| |||| | |||||||| || |||||||||| Sbjct 417 CTTCCTCTTCCTCACGGCCGCGAAGACGGATGTTGCATCCATTGGG-AGAGCACCAAGAA 475 Query 473 AGCACAAGTACATTGCTGCCATAGGAGTTATCGTGCCGATAATCTGCGTTGGAAG-CGTG 531 |||||||||||||||||||||| || ||||||||||| || ||||||| ||| || |||| Sbjct 476 AGCACAAGTACATTGCTGCCATTGGTGTTATCGTGCCAATTATCTGCG-TGGGAGCCGTG 534 Query 532 GGGATGGCCATGCGAGACCAAATGGATGAAAACTTGCAGAAGCCTTCGTCCATT-GGAGG 590 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||| || || Sbjct 535 GGGATGGCCATGCGAGATAAAATGGATGAAAACTTGAAGAAGCCTTCGTCCATTGGGGGG 594 Query 591 AGTCGTGTTCGCCTTGTCTTTCACTTCTTTCCCGGTCATTTACACCGTTTTGAGAGACAT 650 | || ||||||||||| ||||||| |||||||| |||||||| | |||||||||||||| Sbjct 595 A-TCATGTTCGCCTTGGCTTTCACCTCTTTCCCTGTCATTTATTCTGTTTTGAGAGACAT 653 Query 651 GAACCTTCTCAACTCCGAGGTGGGCAAGTTCGCCATGTCGGTGGCTCTCCTTGGAGACAT 710 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 654 GAACCTTCTTAACTCCGAGGTGGGCAAGTTCGCCATGTCGGTGGCTCTCCTTGGAGACAT 713 Query 711 GGCAGGGGTCTACGTGATTGTTATTTTTGAAGCCATGACGCATGCTGACGTAGGAGGAGC 770 |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| Sbjct 714 GGCAGGGGTCTACGTGATTGTTATTTTTGAAGCCATGACGCAGGCTGACGGAGGAGGAGC 773 Query 771 TTATTCTGTCTTCTGGTTTCTAGTATCGGTGGTCATCTTCGCAGCTTTTATGCTTCTGGT 830 ||| || |||| |||||||||||||||||||| |||||||| |||||||||||| |||| Sbjct 774 ATATGCTCTCTTTTGGTTTCTAGTATCGGTGGTAATCTTCGCGGCTTTTATGCTTTTGGT 833 Query 831 TGTTAGACGAGCCTTTGATTGGATAGTCT-CCCAAACGCCTGAAGGAACACTTGTGAACC 889 |||||||||||||||||||||||| || | |||||||||||||||||||||||||||||| Sbjct 834 TGTTAGACGAGCCTTTGATTGGATTGT-TGCCCAAACGCCTGAAGGAACACTTGTGAACC 892 Query 890 AAAACTACATCGTCATGATTCTCATGGGTGTTCTTGCCTCTTGTTTCCTCACAGACATGT 949 |||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct 893 AAAACTACATTGTCATGATTCTCATGGGTGTCCTTGCCTCTTGTTTCCTCACCGACATGT 952 Query 950 TCGGTCTTTCTATAGCCGTGGGACCCATTTGGCTAGGGTTACTAGTCCCTCATGGCCCAC 1009 ||||||||||||||||||| |||||||||||| ||||||| || |||||||||||||||| Sbjct 953 TCGGTCTTTCTATAGCCGTAGGACCCATTTGGTTAGGGTTGCTGGTCCCTCATGGCCCAC 1012 Query 1010 CGTTGGGTTCGACGTTGGCTGTCCGAAGCGAGACCTTCATCTATGAATTTTTGATGCCTT 1069 |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| Sbjct 1013 CGTTGGGTTCGACGTTGGCTGTTCGGAGCGAGACCTTCATCTATGAATTTTTGATGCCTT 1072 Query 1070 TCACATATGCTCTAGTGGGACAAGGCACCAATATCCACTTCCTTAGAGATGAGACATGGC 1129 || | |||||| | |||||||||||||||||||| |||| | |||||||||||||||||| Sbjct 1073 TCTCTTATGCTTTGGTGGGACAAGGCACCAATATTCACTACTTTAGAGATGAGACATGGC 1132 Query 1130 GCAATCAGCTATCTCCTCTCTTCTACATGACCGTCGTCGGCTTCATCACCAAGTTTCTCT 1189 | ||||||| ||||||||||||||||||||| ||||||||||| |||| |||||||||| Sbjct 1133 GTGATCAGCTCTCTCCTCTCTTCTACATGACCCTCGTCGGCTTCTTCACTAAGTTTCTCT 1192 Query 1190 CTACCGCTTTCGCTGCTCTATTCTTCAAAGTCCCCGCTAGGGAAAGTATTACACTTGGTT 1249 |||||||| | ||||||| ||||||||||||||||||||||| ||| | || ||||| | Sbjct 1193 CTACCGCTGCCACTGCTCTCTTCTTCAAAGTCCCCGCTAGGGACAGTCTCACGCTTGGGT 1252 Query 1250 TGATGATGAACTTAAGAGGTCAGATGGATTTGTTGGTATACTTGCATTGGATCGATAAAC 1309 ||||||||||||| ||||| ||||||||| | ||||| |||||||||||||||||||||| Sbjct 1253 TGATGATGAACTTGAGAGGCCAGATGGATATCTTGGTCTACTTGCATTGGATCGATAAAC 1312 Query 1310 GTATTGTGGGCTTTCCCGGTTACACTGTCATGGTTTTGCATACGGTTGTGGTCACAGCTG 1369 |||||||||||||||| |||| ||||||||||||||||||| ||||||| ||||| || | Sbjct 1313 GTATTGTGGGCTTTCCAGGTTTCACTGTCATGGTTTTGCATTCGGTTGTAGTCACGGCCG 1372 Query 1370 TAACGACCCCACTCATCAACTTTTTCTACGATCCCACTCGACCTTACCGAAGCAGCAAGC 1429 || |||| || ||||||| |||| |||||||||||||||| || |||||||||||||| | Sbjct 1373 TATCGACGCCGCTCATCAGCTTTCTCTACGATCCCACTCGGCCATACCGAAGCAGCAAAC 1432 Query 1430 ACCGCACCATCCAACACACTCCTCAGAACACCGAGATGGGACTGGTTCTTGCAGTTTCCG 1489 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct 1433 ACCGCACCATCCAACACACTCCTCAAAACACCGAGATGGGACTGGTTCTTGCAGTCTCCA 1492 Query 1490 ACCACGAAACCTTGTCGGGTTTGATAACTTTTCTCGATTTCGCCTATCCCACTAAAAGTA 1549 ||||||||||||| || || ||||||||||| ||||| |||||||||||||||||||||| Sbjct 1493 ACCACGAAACCTTATCCGGCTTGATAACTTTCCTCGACTTCGCCTATCCCACTAAAAGTA 1552 Query 1550 GTCCCTTATCTATATTCGCAGTCCAGCTAGTGGAACTAGCAGGAAGAGCCACGCCGTTGT 1609 ||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct 1553 GTCCCTTGTCTATATTCGCAGTCCAGCTTGTGGAACTAGCAGGGAGAGCCACGCCGTTGT 1612 Query 1610 TTATTGACCACGAACAACgaaaggaggaggaagaagaagaatacgaggaggaagaggaag 1669 |||||||||| || || |||| ||||||||| ||||||||||||||||||||||| |||| Sbjct 1613 TTATTGACCATGAGCAGCGAAGGGAGGAGGATGAAGAAGAATACGAGGAGGAAGAAGAAG 1672 Query 1670 agCCTGAACGTA-A--GCAAAGTGGACGGATAGATCAGGTGCAAAGCGCCTTTAAGTTGT 1726 | ||||| |||| | ||||||||| || ||||| || || || |||||||||||||||| Sbjct 1673 ACCCTGACCGTACAACGCAAAGTGGGCGAATAGACCAAGTCCAGAGCGCCTTTAAGTTGT 1732 Query 1727 ACGAAGAGAAAAGAAATGAGTGCGTGA-CG-TTGCGTTCATACACAGCTCATGCTCCAAA 1784 || ||||||||||| ||||||| || | || || ||| | ||||| |||||||||||||| Sbjct 1733 ACCAAGAGAAAAGAGATGAGTGTGT-ATCGCTT-CGTGCCTACACCGCTCATGCTCCAAA 1790 Query 1785 ACGTCTCATGTACCAAGACATTTGCGAGCTTGCCTTAGGC-AAGAAAA-CCGCTTTCATT 1842 |||||||||||||||||||||||||||||| ||||| ||| || |||| ||||||||||| Sbjct 1791 ACGTCTCATGTACCAAGACATTTGCGAGCTGGCCTT-GGCTAA-AAAAGCCGCTTTCATT 1848 Query 1843 CTCTTACCTTATCAGAAAGAGCGTCTTGAAGACGCTGCCCCTACCGAGCTACGTGATTCC 1902 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1849 CTCTTACCTTATCAGAAAGAGCGTCTTGAAGACGCTGCCCCTACCGAGCTACGTGACTCC 1908 Query 1903 GGCATGCTATCTGTGAACGCAGACGTCTTGGAACACACACCTTGCTCTGTCTGTATATAT 1962 |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| || Sbjct 1909 GGCATGCTATCTGTGAACGCAGACGTATTGGAACACACACCTTGCTCTGTATGTATCTAC 1968 Query 1963 TTTGACAAGGGACGGCTTAAGAACGCGGTGGTTAGGTTATCCATGGACCTACAACACTCA 2022 |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1969 TTTGACAAAGGACGGCTTAAGAACGCGGTGGTTCGGTTATCCATGGACCTACAACACTCA 2028 Query 2023 ACAAACTCAATCCGTATGAGGCAAGAAACGTACCGTTTCGTGGTTTTGTTTTTAGGAGGA 2082 |||||||||| |||||||| |||||||| ||||||||||||||||||||| |||||||| Sbjct 2029 ACAAACTCAAGCCGTATGAAACAAGAAACATACCGTTTCGTGGTTTTGTTTCTAGGAGGA 2088 Query 2083 GCTGATAACAGAGAAGCTCTACATCTAGCCGATAGAATGTCAACAAACCCGGACGTAACG 2142 |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| Sbjct 2089 GCTGATAACAGAGAAGCTCTACATTTAGCCGATAGAATGTCGACAAACCCGGACGTAACC 2148 Query 2143 TTGACTGTGATCCGATTCTTATCGTACAACCACGAAGGAGAAGACGAGAGAGAGAAGAAG 2202 ||||| |||||||||||||| ||| ||||||||||||||| || ||||||||||||||| Sbjct 2149 TTGACGGTGATCCGATTCTTGGCGTTCAACCACGAAGGAGAGGATGAGAGAGAGAAGAAG 2208 Query 2203 CTAGACGATGGTGTAGTCACATGGTTTTGGGTCAAAAACGAAAGCAACGAGAGGGTTAGT 2262 ||||||||||| |||||||| |||||||||||||| |||||| | ||||| ||||||||| Sbjct 2209 CTAGACGATGGGGTAGTCACGTGGTTTTGGGTCAAGAACGAAGGAAACGATAGGGTTAGT 2268 Query 2263 TACAAAGAAGTTGTAGTCAAGAACGGTGCTGAGACACTCGCTGCAATCCAAGCAATGAAT 2322 |||||||| |||||||| || ||||||||||||||| | ||||| ||||||||||||||| Sbjct 2269 TACAAAGAGGTTGTAGTTAAAAACGGTGCTGAGACATTGGCTGCGATCCAAGCAATGAAT 2328 Query 2323 GTCAACGACTACGATCTCTGGATAACCGGAAGAAGAGAAGGGATCAACCCAAAGATTCTT 2382 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 2329 GTCAACGACTACGATCTATGGATAACCGGAAGAAGAGAAGGGATCAACCCAAAGATTCTT 2388 Query 2383 GAAGGTTTATCCACGTGGAGCGAAGACCACCAGCTCGGAGTCATTGGAGACACCGTGGCT 2442 ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct 2389 GAAGGTTTATCCACGTGGAGCGAAGACCACCAGCTTGGAGTCATCGGAGACACCGTGGCT 2448 Query 2443 GCGA-GCGTCTTT-GCCTCAGAAGGG-TCGGTGTTGGTGGTGCAGCAACAAGTGAGGAAC 2499 | || |||| ||| ||||| || ||| |||||||||||||||||||||||||| |||||| Sbjct 2449 G-GAAGCGT-TTTCGCCTCCGA-GGGATCGGTGTTGGTGGTGCAGCAACAAGTAAGGAAC 2505 Query 2500 CAAAAAGGTGGTGATGGTTTCTTGAATGGCAAGTTTGATTACAAGAGGTTCTTATCTCCT 2559 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 2506 CAAAAAGGTGGTGATGGTTTCTTGAATGGCAAGTTTGATTACAAGAGTTTCTTATCTCCT 2565 Query 2560 TGGTCTCACTCTCATAATTGA 2580 ||||||||||||||||||||| Sbjct 2566 TGGTCTCACTCTCATAATTGA 2586 > Ahg495963 jgi|Araly1|495963|fgenesh2_kg.8__1779__AT5G58460.1 Length=2583 Score = 2484 bits (1345), Expect = 0.0 Identities = 2210/2622 (84%), Gaps = 81/2622 (3%) Strand=Plus/Plus Query 1 ATGGTTAGGCACTTCCCCA-TCAATGACCAGAGT-CTCCTGCCTGCCCATTTTGGGTTCT 58 ||||||||| | ||||| | | ||||| |||| | ||||||| ||| ||| ||||||| Sbjct 1 ATGGTTAGGTATTTCCCAAGT-GATGACTGGAGTGC-CCTGCCTACCCGTTTCGGGTTCT 58 Query 59 GGCCGGGTAACT-CAACCA-CACCCGGAGAGGTCAGCAATCGTGTTTTCTCTCCCAAAAT 116 ||||||| || | |||||| || |||||| |||||||| |||||||||||| | | | | Sbjct 59 GGCCGGGGAA-TCCAACCACCA-CCGGAGTGGTCAGCAGCCGTGTTTTCTCTGCTAGACT 116 Query 117 TCCGGTGGTTTGCCGGA-A-ACTTCATAG-TAAGCAGCCGTTTGGAATGTTCAAAGGCGA 173 |||||||||||| | || | | |||| | |||||||||||| ||||||||||||||||| Sbjct 117 TCCGGTGGTTTGTC-GACAGA-TTCA-CGATAAGCAGCCGTTCGGAATGTTCAAAGGCGA 173 Query 174 AAAT-GCTATGAACTACGCATTTTCGACCTTTTTGATCGAAGCAATCA-TCATCATTTTC 231 |||| || ||||||||| ||||||| || ||||||||||||||||| | |||||||||| Sbjct 174 AAATGGC-ATGAACTACACATTTTCAACATTTTTGATCGAAGCAAT-ACTCATCATTTTG 231 Query 232 TTCATCAAAGTTG-TTAGCATTGC-CCTTCGACCTTTTCGCCAACCTCGTATAGTCAGTG 289 ||||||||| ||| ||| | || | |||||||||| |||| ||||||||||||||| | | Sbjct 232 TTCATCAAAATTGTTTA-C-TTCCTCCTTCGACCTCTTCGTCAACCTCGTATAGTCTGCG 289 Query 290 AGATCATTGGTGGAATGATGATAGGACCATCGATGTTTGGAGGAATCAGAAATTTCAATT 349 ||||||||||||| |||||||||||||| || ||| ||||| ||| | |||| ||||||| Sbjct 290 AGATCATTGGTGGGATGATGATAGGACCGTCCATGCTTGGAAGAAGCCGAAACTTCAATT 349 Query 350 ACTATTTATTCCCACCAATTGCGAATTACATATGCGCAAACATAGGACTGATGGGGtttt 409 ||||| | || || ||||||||||||||||||||||| |||||||||||| |||| || | Sbjct 350 ACTATCTGTTTCCTCCAATTGCGAATTACATATGCGCGAACATAGGACTGTTGGGATTCT 409 Query 410 tttACTTCCTCTTCCTCACGGCGGCCAAGACGGACGTTGGAGCCAT-TGGGAAGGCACCA 468 |||| ||| ||||||||||||| |||||||||||||||| || || | || |||||| Sbjct 410 TTTATTTCTTCTTCCTCACGGCTGCCAAGACGGACGTTGCAGAAATCT-TTAAAGCACCA 468 Query 469 AGAAAGCACAAGTACATTGCTGCCA-TAGGAGTTATCGTGCCGA-TAATCTGCGTTGGAA 526 |||||||| |||||||||||||||| || | ||| | ||||||| | | ||||| || Sbjct 469 AGAAAGCATAAGTACATTGCTGCCATTA-GCGTTTTGGTGCCGATTGCT-TGCGTGGGGG 526 Query 527 G--CGTGGGGATGGCCATGCGAGACCAAATGGATG-AAAACTTGCAGAAGCCTTCGTCCA 583 | || |||| | ||| || ||| ||||||||| || | |||||||| |||| |||| Sbjct 527 GCACG-GGGGCT-GCCTTGAAAGAAAAAATGGATGTAAGA-TTGCAGAAATCTTCTTCCA 583 Query 584 TTGGAGGAGTCGTGTTCGCCTTGTCTTTCACTTCTTTCCCGGTCATTTACACCGTTTTGA 643 ||||||| ||| |||||||||| |||||||||||| || ||||||||||| ||||||| Sbjct 584 TTGGAGGGGTCACGTTCGCCTTGGGTTTCACTTCTTTTCCAGTCATTTACACTGTTTTGA 643 Query 644 GAGACATGAACCTTCTCAACTCCGAGGTGGGCAAGTTCGCCATGTCGGTGGCTCTCCTTG 703 |||||||||||||||||||||||||| | || |||||||||||||| ||| ||||||| | Sbjct 644 GAGACATGAACCTTCTCAACTCCGAGATAGGAAAGTTCGCCATGTCAGTGACTCTCCTCG 703 Query 704 GAGACATGGCAGGGGTCTACGTGATTGTTATT-TTTGAAGCCATGACGCATGCTGAC-GT 761 ||||||||| |||| |||||||| ||||| || |||||||||||| |||| |||||| || Sbjct 704 GAGACATGGTAGGGATCTACGTGCTTGTT-TTGTTTGAAGCCATGGCGCAGGCTGACGGT 762 Query 762 --AGGAGGAGCTTATTCTGTCTTCTGGTTTCT-AGTATCGGT-GGTC-ATCTTCGCAGCT 816 ||||||||| || |||||| | |||||||| | | || | || | ||||| || ||| Sbjct 763 GGAGGAGGAGCATACTCTGTCATATGGTTTCTCA-TCTC-ATCGG-CTATCTTGGCCGCT 819 Query 817 TTTATGCTTCTGGTTGTTAGACG-AGCCTTTGATTGGATAGTCTCCCAAACGCCTGAAGG 875 ||| ||||| ||||||| | ||| || |||||| |||| ||| || |||||||||| || Sbjct 820 TTTTTGCTTTTGGTTGTGAAACGAAG-CTTTGAGAGGATTGTCGCCAAAACGCCTGAGGG 878 Query 876 AACACTTGTGAACCAAAACTACATCGTCATGATTCTCATGGGTGTTCTTGCCTCTTGTTT 935 | ||| ||||||||||||||||| |||||||||||||||||||| |||| ||||||||| Sbjct 879 AGGACTCGTGAACCAAAACTACATTGTCATGATTCTCATGGGTGTCCTTGTCTCTTGTTT 938 Query 936 CCTCACAGACATGTTCGGTCTTTCTATAGCCGTGGGACCCATTTGGCTAGGGTTACTAGT 995 |||||| |||||||| ||| | |||||||||| |||||||||||||||||||| | || Sbjct 939 CCTCACCGACATGTTTGGTATGGCTATAGCCGTTGGACCCATTTGGCTAGGGTTGGTGGT 998 Query 996 CCCTCATGGCCCACCGTTGGGTTCGACGTTGGCTGTCCGAAGCGAGACCTTCATCT-ATG 1054 |||||||||||||||||||||||| ||||||||| | || |||||||||||| | | ||| Sbjct 999 CCCTCATGGCCCACCGTTGGGTTCCACGTTGGCTATTCGGAGCGAGACCTTCGT-TAATG 1057 Query 1055 AATTTTTGATGCCTTTCACATATGCTCTAGTGGGACAAGGCACCAATATCCACTTCCTTA 1114 |||| |||||||||||| | | |||| ||||||||||| |||||| || |||| |||| Sbjct 1058 AATTCTTGATGCCTTTCTCTTTTGCTTTAGTGGGACAAAAAACCAATGTCAACTTACTTA 1117 Query 1115 G-AGATGAGACATGGCGC-AATCAGCTATCTCCTCTCT-TCTACATGACCGTCGTCGGCT 1171 | | ||||||| |||| | || ||| | |||||||| | ||||||||| | |||| |||| Sbjct 1118 GCA-ATGAGACTTGGC-CTAAACAGGTCTCTCCTCT-TGTCTACATGAGCATCGTTGGCT 1174 Query 1172 TCATCACCAAGTTTCTCT-CTACCGCTTTCGCTGCTCTATTCTTCAAAGTCCCCGCTAGG 1230 || ||||||||||| ||| || || || ||||||||| ||||| ||||||||| ||||| Sbjct 1175 TCGTCACCAAGTTTGTCTCCT-CCACTGGCGCTGCTCTCTTCTTTAAAGTCCCCACTAGG 1233 Query 1231 GAAAGTATTACACTTGGTTTGATGATGAACTTAAGAGGTCAGATGGATTTGTTGGTATAC 1290 || ||| | || ||||| |||||||||||| | ||||| ||||| ||| | ||| | ||| Sbjct 1234 GACAGTCTCACGCTTGGCTTGATGATGAACCTGAGAGGCCAGATCGATATCTTGCTCTAC 1293 Query 1291 TTGCATTGGATCGATAAACGTATTGTGGGCTTTCCCGGTTACACTGTCATGGTTTTGCAT 1350 |||||||||||||| |||||||| || ||||| |||||||| ||||||||||||||| || Sbjct 1294 TTGCATTGGATCGACAAACGTATGGTAGGCTTACCCGGTTATACTGTCATGGTTTTGTAT 1353 Query 1351 ACGGTTGTGGTCACAGCTGTAACGA-CCCCACTCATCAACTTT-TTCTACGATCCCACTC 1408 | || ||||||| | |||||| | | || |||||| | ||| ||||||||||||||| Sbjct 1354 GCCATTCTGGTCACGGGTGTAAC-AGCGCCGCTCATC-AGTTTCCTCTACGATCCCACTC 1411 Query 1409 GACCTTACCGAAGCAGCAAGCACCGCACCATCCAACACACTCCTCAGAACACCGAGATGG 1468 | |||||| |||||||||||| |||||| ||||| ||||||||||||||||||||||||| Sbjct 1412 GGCCTTACAGAAGCAGCAAGCGCCGCACAATCCAGCACACTCCTCAGAACACCGAGATGG 1471 Query 1469 GACTGGTTCTTGCAGTTTCCGACCACGAAACCTTGTCGGGTTTGATAACTTTTCTCGATT 1528 |||| ||||||||||| |||||||| || ||||| || || ||||| || |||||||| | Sbjct 1472 GACTAGTTCTTGCAGTCTCCGACCATGATACCTTCTCTGGCTTGATCACCTTTCTCGACT 1531 Query 1529 TCGCCTATCCCACTAAAAGTAGTCCCTTATCTATATTCGCAGTCCAGCTAGTGGAACTAG 1588 |||||||||||||||||| |||||| || |||||||||||| ||||||| |||||||| | Sbjct 1532 TCGCCTATCCCACTAAAACTAGTCCTTTTTCTATATTCGCAATCCAGCTTGTGGAACTGG 1591 Query 1589 CAGGAAGAG-CCACGCCGTTGTTTATTGACCACGAACAA-Cgaaaggaggaggaagaaga 1646 ||| | | ||| |||||||||||||| |||| |||| ||||| || |||| || || Sbjct 1592 AAGGGCGTGCCCA-ACCGTTGTTTATTGAACACG-ACAAGCGAAA-GA--AGGAGGATGA 1646 Query 1647 agaatacgaggaggaagaggaagagCCTGAACGTAAGC-AAAGTGGACG-GA-TAGATCA 1703 ||||||||||||||||||||||||||| || |||| || | | | | | || |||| || Sbjct 1647 AGAATACGAGGAGGAAGAGGAAGAGCCGGAGCGTATGCGGAGGAGCAGGCGAGTAGACCA 1706 Query 1704 GGTGCAAAGCGCCTTTAAGTTGTACGAAGAGAAAAGAAATGAGTGCGTGACGTTGCGTTC 1763 |||||| ||||||||||| ||||| |||||||||||| |||||| |||| | ||| | | Sbjct 1707 GGTGCAGAGCGCCTTTAAACTGTACCAAGAGAAAAGAAGTGAGTGTGTGAAGATGCATGC 1766 Query 1764 ATACACAGCTC-ATGCTCCAAAACGTCTCATGTACCAAGACATTTGCGAGCTTGCCTTAG 1822 ||||| || | ||||| |||| | || |||||| ||||| ||||| | | | ||||| | Sbjct 1767 CTACACCGC-CAATGCTTCAAAGCATCACATGTATCAAGATATTTGTGGGGTGGCCTT-G 1824 Query 1823 -GCAAGAAAACCGCTTTCATTCTCTTACCTTATCAGAAAGAGCGTCTTGAAGACGCTGCC 1881 |||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct 1825 ACCAAGAAAACCGCTTTCATTCTCTTACCTTATCAGAAAGAGCGTCTTCAAGACGCAGCT 1884 Query 1882 CCTACCGAGCTACGTGATTCCGGCATGCTATCTGTGAACGCAGACGTCTTGGAACACACA 1941 | ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct 1885 CTTACCGAGCTACGTGACTCCGGCATGCTATCTGTGAACGCAGACGTCTTGGCACACACA 1944 Query 1942 CCTTGCTCTGTCTGTATATATTTTGACAAGGGACGGCTTAAGAACGCGGTGGTTAGGTTA 2001 ||||||||||||||||| |||| ||| |||||||| ||||| ||||| ||||| ||| | Sbjct 1945 CCTTGCTCTGTCTGTATCTATTATGAGAAGGGACGACTTAAAAACGCCATGGTTCGGTCA 2004 Query 2002 TCCATGGACCTACAACACTCAACAAACTCAATCCGTATGAGGCAAGAAACGTACCGTTTC 2061 |||||||||| |||||| ||||||| |||| || |||||||||||||| |||||||||| Sbjct 2005 TCCATGGACCCGCAACACACAACAAATTCAAGCCATATGAGGCAAGAAATGTACCGTTTC 2064 Query 2062 GTGGTTTTGTTTTTAGGAGGAGCTGATAACAGAGAAGCTCTACATCTAGCCGATAGAATG 2121 |||||| |||||||||||||||||||||||||||||||||| ||||| || ||||| ||| Sbjct 2065 GTGGTTCTGTTTTTAGGAGGAGCTGATAACAGAGAAGCTCTGCATCTGGCTGATAGGATG 2124 Query 2122 TCA-ACAAACCCGGACGTAACGTTGACTGTGATCCGATTCTTATCGTACAACCACGAAGG 2180 | | || |||| | |||| ||||| || || | ||||| || ||||||||||||| Sbjct 2125 ACGGAGAA-CCCGTATATAACCTTGACAGTTATTAGGTTCTTGGCGCACAACCACGAAGG 2183 Query 2181 AGAAGACGAGAGAGAGAAGAAGCTAGACGATGGTGTAGTCACATGGTTTTGGGTCAAAAA 2240 ||| || ||||| |||||||||||||||||||| || || || ||||| |||||||| || Sbjct 2184 AGAGGATGAGAGGGAGAAGAAGCTAGACGATGGGGTGGTGACGTGGTTCTGGGTCAAGAA 2243 Query 2241 CGAAAGCAACGAGAGGGTTAGTTACAAAGAAGTTGTAGTCAAGAACGGTGCTGAGACACT 2300 |||||||||||| |||||||||||||| || ||||| ||||||||||||||||||||| | Sbjct 2244 CGAAAGCAACGAAAGGGTTAGTTACAAGGAGGTTGTTGTCAAGAACGGTGCTGAGACATT 2303 Query 2301 CGCTGCAATCCAAGCAATGAATGTCAACGACTACGATCTCTGGATAACCGGAAGAAGAGA 2360 ||||| || |||||||||||||| || ||||||||||| ||||||||||| || ||||| Sbjct 2304 GGCTGCGATTCAAGCAATGAATGTTAATGACTACGATCTGTGGATAACCGGGAGGAGAGA 2363 Query 2361 AGGGATCAACCCAAAGATTCTTGAAGGT-TTATCCACGTGGAGCGAAGACCACCAGCTCG 2419 |||||||||||||||||||| ||||| || || ||||||||||| ||||||||||| | Sbjct 2364 AGGGATCAACCCAAAGATTCAGGAAGGACTT-TCTACGTGGAGCGAGGACCACCAGCTTG 2422 Query 2420 GAGTCATTGGAGACACCGTGGCTGCGAGCGTCTTT-GCCTCAGAAGGGTCGGTGTTGGTG 2478 ||||||| |||||||| ||||||| |||||| ||| ||||| || || |||||||||||| Sbjct 2423 GAGTCATCGGAGACACAGTGGCTGGGAGCGT-TTTCGCCTCGGATGGTTCGGTGTTGGTG 2481 Query 2479 GTGCAGCAACAAGTGAGGAACCAAAAAGGTGGTGATGGTTTCTTGAATGGCAAGTTTGAT 2538 ||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||| Sbjct 2482 GTGCAGCAACAAGTGAGGAACCAGAAGGGTGGTGATGGTTTCTTGAACGGCAAGTTTGAT 2541 Query 2539 TACAAGAGGTTCTTATCTCCTTGGTCTCACTCTCATAATTGA 2580 ||||||| || | ||||||||||||||||||||||||||| Sbjct 2542 TACAAGAAATTAGTGTCTCCTTGGTCTCACTCTCATAATTGA 2583 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 97282485730 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5