BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G37130.1 Length=2866 Score E Sequences producing significant alignments: (Bits) Value Ahg941232 jgi|Araly1|941232|scaffold_601776.1 3373 0.0 Ahg893637 jgi|Araly1|893637|Al_scaffold_0006_1633 2765 0.0 > Ahg941232 jgi|Araly1|941232|scaffold_601776.1 Length=2725 Score = 3373 bits (1826), Expect = 0.0 Identities = 2431/2712 (90%), Gaps = 85/2712 (3%) Strand=Plus/Plus Query 70 GTACCACCATGGTCGGCGGGGAAGTTAAAATTCTTCGCGGGTACGAACTCCGTCTCATCC 129 |||| |||||||||| ||| ||| || |||| |||||||| ||||| ||||||||| ||| Sbjct 18 GTACAACCATGGTCGACGGCGAAATTGAAATCCTTCGCGGTTACGAGCTCCGTCTCCTCC 77 Query 130 GGTGCACCGTCTCTTTGCCACTATCAGATCCTCCTCTCGATGAATCCCAACCCGGAACCC 189 ||||||||||||| || ||| |||||||||||||||| ||||| || ||||| | Sbjct 78 GGTGCACCGTCTCGTTAACACAATCAGATCCTCCTCTC---GAATCGCAGTCCGGAGTTC 134 Query 190 ATCCACACGACTCTCTTATAAAGTCCCTTTTGTCTTCAATCGAGGCTGGGA-ACTATCTT 248 ||||| ||||||||||||||| ||||||||||||||||||||||||| ||| |||||||| Sbjct 135 ATCCATACGACTCTCTTATAAGGTCCCTTTTGTCTTCAATCGAGGCT-GGAGACTATCTT 193 Query 249 GAAGCTTTAGCCTCCGAAGCTACTAATCTAATACTC-G-GA----GAGTACG-AGT--TC 299 | |||| |||||||||| ||||||| |||||| || | || |||| || ||| | Sbjct 194 GGAGCTCTAGCCTCCGACGCTACTAGGCTAATAATCGGAGATTCCGAGTTCGAAGTAGTT 253 Query 300 GACCCGGTTGATTCCGCCGAGCGAGTTTACTCCGAGCTTCTCAACAAAGTCGAATCGTTC 359 || ||||||||||||| |||||||||||||||||||||||| |||| |||||||||||| Sbjct 254 GATACGGTTGATTCCGCTGAGCGAGTTTACTCCGAGCTTCTCTACAAGGTCGAATCGTTC 313 Query 360 GTGTTGAACGATTCTTCGGATGAAATCGATAAGGCTCGGCGTTCTTTTCTTGTGATGTGC 419 ||||| ||||| ||||| |||||||||| ||||||||| ||| || |||| ||||||||| Sbjct 314 GTGTTAAACGAATCTTCAGATGAAATCGGTAAGGCTCGCCGTGCTGTTCTGGTGATGTGC 373 Query 420 TTAGCAATCGCGGCTGCTTTTTGGTTCACTTGTTGCAATTTGACCGGGTCGAC-GCAAGG 478 |||||||| ||||||||||||||||||||| | |||||||||||||||||||| | |||| Sbjct 374 TTAGCAATTGCGGCTGCTTTTTGGTTCACTCGGTGCAATTTGACCGGGTCGACAG-AAGG 432 Query 479 ATCAACAAAATGTTCGTTACCGTTTAG-AGTACCAGAAAGTAAGGAATTGGTTGAATGGG 537 ||||||||||||||||||||||||| | |||| |||||||||| ||| | |||||||||| Sbjct 433 ATCAACAAAATGTTCGTTACCGTTT-GTAGTATCAGAAAGTAAAGAACTAGTTGAATGGG 491 Query 538 AGAACTGGGCTAAGATTCATCTCATGTCTGCAGGTTCTGACTTGCTCGGGAAGTTTTCTA 597 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| || Sbjct 492 AGAACTGGGCTAAGATTCAGCTCATGTCTGTTGGTTCTGACTTGCTCGGGAAGTTTTTTA 551 Query 598 ATCTCCAGCATTTAGTTTTTGCTAGATTGCTGCTGTTAAAGTTGAAAGATTTGTTGTTTG 657 |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| Sbjct 552 ATCTCCAGCATTTAGTTTTTGCTAGAATGCTTCTGTTAAAGTTGAAAGATTTGTTGTTTG 611 Query 658 AGACAAGTGCCTCTGAAACTTTTCAACTT-AGGAGTATTTCATGGTGGCTTGTCAGAGTC 716 |||||| ||| ||||||||||| || || ||||||||||||||||||||||||||||| Sbjct 612 AGACAACTGCAACTGAAACTTTTGAA-TTAAGGAGTATTTCATGGTGGCTTGTCAGAGTT 670 Query 717 TTACTTATTCATCAAAGAGTTCTTCACGAGCCATCTTCATCTTTGTTTGAGATGTTGCAA 776 |||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct 671 TTACTTATCCATCAAAGAGTTCTACACGAGCGATCTTCATCTTTGTTTGAGATGTTGCAA 730 Query 777 GTTTACATGGCCGAAGCTCTAGACCATTTTGGAGCATTGGAAAAAGTCGAAAGCTACTGG 836 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 731 GTTTACATGGCCGAAGCTCTAGACCATTTTGGAGCATTGGAAAAAGTAAAAAGCTACTGG 790 Query 837 GGTGCCAAGTTGCTACAAGACGAAGCTTCATCCATCACGTCAATCATCCATCTGGAAGCA 896 ||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||| Sbjct 791 GGTGCCAAGTTGCTAGTAGACGAAGCTTCATCCATCACGTCAACCATCCATCTGGAGGCA 850 Query 897 TGTGTACTGCAATATATATATCGAAGGATTGACCCTTTTCGGTTGCAGCTTGAATCTGCT 956 ||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||| Sbjct 851 TGTGTACTGCAATATATATATGGAAGGATTGATCCTGCTCGGTTGCAGCTTGAATCTGCT 910 Query 957 AAAGCAGCAGCAGGGCTAGAGTTCTCTGTTACTGGGGCTCTGGGATTTCGTACTATTCAC 1016 |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct 911 AAAGCAGCAGCAGGGCTAGAGTTCTCTGTTACCGGGGCTCTTGGATTTCGTACTATTCAC 970 Query 1017 CAAGTAG-TGCCAAAGGCACAGATGGTATTGGTAGCCAATACTAGCTCATCCAATGGGGC 1075 ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 971 CAAGTAGAT-CCAAAGGCACAGATGGTATTGGTAGCCAATACTAGCTCATCCAATGGGGA 1029 Query 1076 TGTGAGGTTGGCCTCTGAGAAAGCTGATGTTGGACCTTATGGAGCTTGGGAAGGTGAAAC 1135 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| | Sbjct 1030 TGTGAGGTTGGCCTCTGAGAAAGCTGATGTTGGACCTTATGAAGCTTGGGGAGGTGAAGC 1089 Query 1136 ACCTCAAGTGTTTATGACTCCCAAACTAGTGAACAACGAGAGTGAAGCTGGCACAGATTC 1195 |||| |||| | |||||||||||||||||| |||||||||||||||||||| | |||||| Sbjct 1090 ACCTGAAGTATATATGACTCCCAAACTAGTAAACAACGAGAGTGAAGCTGGGAAAGATTC 1149 Query 1196 AGTGCCCTTAAAACCAGTTGAACAGGCATTGATTTTGGCCCAGTGCCTTCTAATTGAAAG 1255 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1150 TGTGCCCTTAAAACCAGTTGAACAGGCATTGATTTTGGCCCAGTGCCTTCTAATTGAAAG 1209 Query 1256 GGGTAGTCGGCACGATGCA-ATGCAAAGTTGGGATATGGCTCCATATATTGAGGCAATTG 1314 ||||||| ||||||||| | |||||||| ||||||||||||||||||||||||||||||| Sbjct 1210 GGGTAGTAGGCACGATG-AGATGCAAAGATGGGATATGGCTCCATATATTGAGGCAATTG 1268 Query 1315 ATTCTCAAAAGTCAAC-CTATTTTGTTCTACGGTGTTTTTGTGACTTATTGCGTGTTCGA 1373 |||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||| Sbjct 1269 ATTCTCAAAAGTCAACAC-ATTTTGTTCTACGGTGTTTTTGTGACTTATTACGTGTTCGA 1327 Query 1374 TGGGAATCATCTCGATATCGTAC-AAGGGAACGCGCCCGGGATATGATGGATAAGCTGGT 1432 ||||||||| || || |||||| ||||| |||||||| ||| ||||||||||| |||| Sbjct 1328 TGGGAATCAACTAGAGGTCGTACAAAGGG-ACGCGCCCTGGAGATGATGGATAAATTGGT 1386 Query 1433 TGGAGCTATTAGCAAGAGCGATCCTGGAGTATCAAATCGGATCCCTTTATGCTATGCAGT 1492 ||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||| Sbjct 1387 TGGAGCTATTAACAAGAGCGATCCTGGAGTATCAAACCGTATCCCTTTATGCTATGCAGT 1446 Query 1493 GTATCTTCCTACTATTCCTGCTTTGAGAAAGGAATATGGTGAGCTTCTGGTGAGTTGTGG 1552 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1447 CCATCTTCCTACTATTCCTGCTTTGAGAAAGGAATATGGTGAGCTTCTGGTGAGTTGCGG 1506 Query 1553 TTAT-GTTGGGGAAGCAATCACAATATTTGAGAGCCTGGAATTGTGGGATAATCTAATTT 1611 || | |||||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct 1507 TT-TGGTTGGGGAAGCAATCACAATATTTGAGAGCCTGGAACTGTGGGATAATCTAATCT 1565 Query 1612 ACTGCTACTG-CTCCATGGGAAAGAAATCAGCGGCTGTAGATCTCATCAATGCACGGCTT 1670 |||||||||| || | |||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1566 ACTGCTACTGCCTTC-TGGGAAAGAAATCAGCAGCTGTAGATCTCATCAATGCACGGCTT 1624 Query 1671 CTTGAACGCCCAAATGACCCAAGATTATGGTGTTCATTGGGTGATGTTACGATTTCCGAT 1730 |||||| ||||||||||||||||||||||||||| ||||||||||||| ||| ||| Sbjct 1625 GATGAACGGCCAAATGACCCAAGATTATGGTGTTCACTGGGTGATGTTACTATTAATGAT 1684 Query 1731 TCCTGTTATGAAAAAGCCCTGGAAGTTTCAAATGACAAATCAGTTCGTGCTAAGCGGGCT 1790 ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct 1685 TCCTGTTATGAAAAAGCCCTGGAAGTTTCAAATGATAAGTCAGTTCGTGCTAAGCGGGCT 1744 Query 1791 CTTGCTCGAAGCGCATACAATCGCGGTGATTTTGAGAAGTCGAAGATACTGTGGGAGGCT 1850 ||||| || ||||| |||||||| ||||||||||||||||||||||| |||||||||||| Sbjct 1745 CTTGCACGCAGCGCCTACAATCGGGGTGATTTTGAGAAGTCGAAGATGCTGTGGGAGGCT 1804 Query 1851 GCAATGGCGTTAAATTCTCTGTATTCAGATGGTTGGTTTGCTCTTGGTGCTGCTGCGTTG 1910 |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||| Sbjct 1805 GCAATGGCCTTAAATTCTCTGTACCCAGATGGTTGGTTTGCTCTTGGTGCTGCTGCATTG 1864 Query 1911 AAGGCCAGGGATCTTCAGAAAGCACTGGATGCATTCACTTTAGCTGTTCATCTTGATCCT 1970 |||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||| Sbjct 1865 AAGGCCAGGGATGTTCAGAAAGCACTGGATGCATTCACTTTTGCTGTTCAACTTGATCCC 1924 Query 1971 GACAATTGGCTGGCTTGGAACAACATTGCTAGTCTGCATATGATTAAGAAAAAGAGCAAA 2030 |||||| || ||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 1925 GACAATGGGGAGGCTTGGAACAACATTGCTTGTCTGCATATGATAAAGAAAAAGAGCAAA 1984 Query 2031 GAATCATTCATTGCATTCAAAGAAGTGCTTAAATTAAACCGAGACAGCTGGCAGATATGG 2090 |||||||||||||| |||||||||| |||||||| || ||||| ||||||||||| ||| Sbjct 1985 GAATCATTCATTGCGTTCAAAGAAGCACTTAAATTCAAGCGAGATAGCTGGCAGATGTGG 2044 Query 2091 GAGAATTTCAGCCATGTAGCTATGGATGTGGGAAATACTGATCAGGCCTTTGAAGCTATA 2150 ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 2045 GAGAATTTCAGTCATGTAGCTATGGATGTGGGAAATATTGATCAGGCCTTTGAAGCTATA 2104 Query 2151 CAACAGATAATGAGATTGACCCAAAACAAGA--GTATCAGTGTTGTTTTATTGGACCGTT 2208 ||||||||| ||| | ||| | ||||||||| || | | ||||||||||||||||||| Sbjct 2105 CAACAGATACTGAAAATGAGCAAAAACAAGAGGGT-TGA-TGTTGTTTTATTGGACCGTA 2162 Query 2209 TAATGACAGA-TTTG--GA-A--AA-T-AG---G-AA-T-A---T-ATC-A-T---A-CG 2244 |||||||||| || | | | || | || | || | | | ||| | | | || Sbjct 2163 TAATGACAGAGTTAGAAAATAGGAATTCAGCATGTAAGTCATCTTCATCGATTGAAACCG 2222 Query 2245 AATCTTCTTCAAATGAATTAATA-AAGACAAAACCA---A---CAACGACC-G--AAAGA 2294 || |||||||| |||||| | | || ||||||||| | |||| ||| | || | Sbjct 2223 AAACTTCTTCAGATGAATCAGCAGAA-ACAAAACCATGTACTGCAAC-ACCAGCTGAA-A 2279 Query 2295 CTCTA---CA--TAGAGTTGTTTGGGAAAATTATTCAGCAGATTGTCAAAACAGAAAGTA 2349 ||| | || |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 2280 CTCAACGCCAGCTAGAGTTGCTTGGGAAAATTATTCAGCAGATTGTCAAAACAGAAAGTA 2339 Query 2350 CATTTGAAAACTGGGGATTATACGCAAGATGGAGTAGAATCAATGGAGATCTTACGATAT 2409 ||| ||||| |||||||||||| |||||||||||||||||||| |||||||||| | ||| Sbjct 2340 CATCTGAAATCTGGGGATTATATGCAAGATGGAGTAGAATCAAAGGAGATCTTATGGTAT 2399 Query 2410 GTAGCGAGGCACTGTTAAAACAAGTGCGATCATATCTGGGGGT-AGAAATGTGGAAAGAC 2468 | ||||||||||||||||| |||||||||||||||| ||| | |||| | ||||||||| Sbjct 2400 GCAGCGAGGCACTGTTAAAGCAAGTGCGATCATATC-AGGGATCAGAAGTTTGGAAAGAC 2458 Query 2469 AAAGAGCGTTTCAAGAAGTTTGCAAGAGCATCATTGGAACTTTGTAGAGTGTACATAGAG 2528 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct 2459 AAAGAGCGTTTCAAGAATTTTGCAAGAGCATCATTGGAACTTTGTAGAGTGTACATGGAG 2518 Query 2529 ATCTCAGCGTCTGTAGAAAGCAAACGAGAACTGTTTAGTGCTGAGATGCATTTGAAGAAC 2588 ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct 2519 ATCTCAGTGTCCACAGGAAGCAAACGAGAACTGTTTAGTGCTGAGATGCATTTGAAGAAC 2578 Query 2589 ACAATCAAACAAGCTAGAAAGAGCTT-TGGTGAGACTGAAGAATTGAAGGAGCTTGAAAG 2647 |||||||||||||||| || |||||| | | || ||||||||||||||||| |||||||| Sbjct 2579 ACAATCAAACAAGCTACAATGAGCTTCTTG-GACACTGAAGAATTGAAGGAACTTGAAAG 2637 Query 2648 TTGCCTTGAGGAGGTCAGAAATGTTACGCAGAAGT-T--TGAAGGGACTACAAACATTAA 2704 ||||||||||||||| |||||||| | ||||||| | ||||| ||||| ||| | || Sbjct 2638 TTGCCTTGAGGAGGTGAGAAATGTAATGCAGAAGAGTGATGAAGAGACTAGAAATACAAA 2697 Query 2705 AACATAAAAGAA 2716 || || |||||| Sbjct 2698 AATATGAAAGAA 2709 > Ahg893637 jgi|Araly1|893637|Al_scaffold_0006_1633 Length=2616 Score = 2765 bits (1497), Expect = 0.0 Identities = 1794/1934 (93%), Gaps = 34/1934 (2%) Strand=Plus/Plus Query 78 ATGGTCGGCGGGGAAGTTAAAATTCTTCGCGGGTACGAACTCCGTCTCATCCGGTGCACC 137 ||||| | ||| |||||| ||| ||||| || || || ||||||||| ||||||||||| Sbjct 1 ATGGTTGACGGCGAAGTTGAAACCCTTCGAGGTTATGAGCTCCGTCTCCTCCGGTGCACC 60 Query 138 GTCTCTTTGCCACTATCAGATCCTCCTCTCGATGAATCCCAACCCGGAACCCATCCACAC 197 |||||||| ||| | ||||||| |||||| |||||||| |||| ||||||||| Sbjct 61 GTCTCTTTAACACAACCAGATCCCCCTCTC---GAATCCCAGTTCGGAGTTCATCCACAC 117 Query 198 GACTCTCTTATAAAGTCCCTTTTGTCTTCAATCGAGGCTGGGAACTATCTTGAAGCTTTA 257 ||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||| || Sbjct 118 GACTCTCTTATAACGTCCCTTTTGTCTTCAATCGAGGCTGGAAACTATCTTGGAGCCCTA 177 Query 258 GCCTCCGAAGCTACTAATCTAATACTC-G-GA----GAGTACGA---GTTCGACCCGGTT 308 |||||||| |||||||| ||||||||| | || |||| ||| | ||||| ||||| Sbjct 178 GCCTCCGACGCTACTAAGCTAATACTCGGCGATTCCGAGTTCGACCTGGTCGACTCGGTT 237 Query 309 GATTCCGCCGAGCGAGTTTACTCCGAGCTTCTCAACAAAGTCGAATCGTTCGTGTTGAAC 368 |||||||| || |||||||| ||| |||||||| |||| ||||||||||||||| ||||| Sbjct 238 GATTCCGCTGAACGAGTTTATTCCCAGCTTCTCGACAAGGTCGAATCGTTCGTGGTGAAC 297 Query 369 GATTCTTCGGATGAAATCGATAAGGCTCGGCGTTCTTTTCTTGTGATGTGCTTAGCAATC 428 ||||| || ||||||||||| |||||||| ||| || |||| |||||||||||||||||| Sbjct 298 GATTCGTCAGATGAAATCGACAAGGCTCGCCGTGCTGTTCTGGTGATGTGCTTAGCAATC 357 Query 429 GCGGCTGCTTTTTGGTTCACTTGTTGCAATTTGACCGGGTCGACGCAAGGATCAACAAAA 488 ||||||||||| ||||||||| | ||||||||||||||||||||| |||||||||| ||| Sbjct 358 GCGGCTGCTTTGTGGTTCACTCGGTGCAATTTGACCGGGTCGACGGAAGGATCAAC-AAA 416 Query 489 TGTTCGT-TACCGTTTAGAGTACCAGAAAGTAAGGAATTGGTTGAATGGGAGAACTGGGC 547 ||| | |||||||| | | || | | || |||||||||||||||||||| Sbjct 417 --TTC-TGTACCGTTT--A--A--AG--A-T------TTAGTTGAATGGGAGAACTGGGC 458 Query 548 TAAGATTCATCTCATGTCTGCAGGTTCTGACTTGCTCGGGAAGTTTTCTAATCTCCAGCA 607 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 459 TAAGATTCAGCTCATGTCTGCAGGTTCTGACTTGCTCGGGAAGTTTTCTAATCTCCAACA 518 Query 608 TTTAGTTTTTGCTAGATTGCTGCTGTTAAAGTTGAAAGATTTGTTGTTTGAGACAAGTGC 667 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct 519 TTTAGTTTTTGCTAGATTGCTTCTGTTAAAGTTGAAAGATTTGTTGTTTGAGACAACTGC 578 Query 668 CTCTGAAACTTTTCAACTT-AGGAGTATTTCATGGTGGCTTGTCAGAGTCTTACTTATTC 726 ||||||||||| || || ||||||||||||||||||||||||||||| |||||||| | Sbjct 579 AACTGAAACTTTTGAA-TTAAGGAGTATTTCATGGTGGCTTGTCAGAGTTTTACTTATCC 637 Query 727 ATCAAAGAGTTCTTCACGAGCCATCTTCATCTTTGTTTGAGATGTTGCAAGTTTACATGG 786 ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 638 ATCAAAGAGTTCTACACGAGCGATCTTCATCTTTGTTTGAGATGTTGCAAGTTTACATGG 697 Query 787 CCGAAGCTCTAGACCATTTTGGAGCATTGGAAAAAGTCGAAAGCTACTGGGGTGCCAAGT 846 ||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||| Sbjct 698 CCGAAGCTCTAGACCATTTTGGAGCATTGGAAAAAGTAAAAAGTTACTGGGGTTCCAAGT 757 Query 847 TGCTACAAGACGAAGCTTCATCCATCACGTCAATCATCCATCTGGAAGCATGTGTACTGC 906 | ||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct 758 TACTAGAAGACGAAGCTTCATCCATTACGTCAACCATCCATCTGGAAGCATGTGTACTGC 817 Query 907 AATATATATATCGAAGGATTGACCCTTTTCGGTTGCAGCTTGAATCTGCTAAAGCAGCAG 966 ||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct 818 AATATATATATGGAAGGATTGATCCTTCTCGGTTGCAGCTTGAATCTGCTAAAGCAGCAG 877 Query 967 CAGGGCTAGAGTTCTCTGTTACTGGGGCTCTGGGATTTCGTACTATTCACCAAGTAGTGC 1026 |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| | Sbjct 878 CAGGGCTAGAGTTCTCTGTTACCGGGGCTCTTGGATTTCGTACTATTCACCAAGTAGTAC 937 Query 1027 CAAAGGCACAGATGGTATTGGTAGCCAATACTAGCTCATCCAATGGGGCTGTGAGGTTGG 1086 ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 938 CAAAGGCGCAGATGGTATTGGTAGCCAATACTAGCTCATCCAATGGGGATGTGAGGTTGG 997 Query 1087 CCTCTGAGAAAGCTGATGTTGGACCTTATGGAGCTTGGGAAGGTGAAACACCTCAAGTGT 1146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 998 CCTCTGAGAAAGCTGATGTTGGACCTTATGGAGCTTGGGAAGGTGAAACACCTCAAGTAT 1057 Query 1147 TTATGACTCCCAAACTAGTGAACAACGAGAGTGAAGCTGGCACAGATTCAGTGCCCTTAA 1206 ||||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||| Sbjct 1058 TTATGACTCCCAAACTAGTGAACAACGAGAGTGAATCTGGCAAAGATTCTGTGCCCTTAA 1117 Query 1207 AACCAGTTGAACAGGCATTGATTTTGGCCCAGTGCCTTCTAATTGAAAGGGGTAGTCGGC 1266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1118 AACCAGTTGAACAGGCATTGATTTTGGCCCAGTGCCTTCTAATTGAAAGGGGTAGTCGGC 1177 Query 1267 ACGATGCAATGCAAAGTTGGGATATGGCTCCATATATTGAGGCAATTGATTCTCAAAAGT 1326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1178 ACGATGCAATGCAAAGTTGGGATATGGCTCCATATATTGAGGCAATTGATTCTCAAAAGT 1237 Query 1327 CAACCTATTTTGTTCTACGGTGTTTTTGTGACTTATTGCGTGTTCGATGGGAATCATCTC 1386 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1238 CAACATATTTTGTTCTACGGTGTTTTTGTGACTTATTGCGTGTTCGATGGGAATCATCTC 1297 Query 1387 GATATCGTACAAGGGAACGCGCCCGGGATATGATGGATAAGCTGGTTGGAGCTATTAGCA 1446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1298 GATATCGTACAAGGGAACGCGCCCGGGATATGATGGATAAGCTGGTTGGAGCTATTAGCA 1357 Query 1447 AGAGCGATCCTGGAGTATCAAATCGGATCCCTTTATGCTATGCAGTGTATCTTCCTACTA 1506 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1358 AGAGCGATCCTGGAGTATCAAATAGGATCCCTTTATGCTATGCAGTGTATCTTCCTACTA 1417 Query 1507 TTCCTGCTTTGAGAAAGGAATATGGTGAGCTTCTGGTGAGTTGTGGTTATGTTGGGGAAG 1566 ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct 1418 TTCCTGCTTTGAGAAAGGAATATGGTGAGCTTCTGGTGAGTTGCGGTTATGCTGGGGAAG 1477 Query 1567 CAATCACAATATTTGAGAGCCTGGAATTGTGGGATAATCTAATTTACTGCTACTGCTCCA 1626 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1478 CAATCACAATATTTGAGAGCCTGGAACTGTGGGATAATCTAATTTACTGCTACTGCTCCA 1537 Query 1627 TGGGAAAGAAATCAGCGGCTGTAGATCTCATCAATGCACGGCTTCTTGAACGCCCAAATG 1686 || ||||||||||||||||||| |||||||||| |||||||||| |||||||||||||| Sbjct 1538 TGCAAAAGAAATCAGCGGCTGTACATCTCATCAAAGCACGGCTTCATGAACGCCCAAATG 1597 Query 1687 ACCCAAGATTATGGTGTTCATTGGGTGATGTTACGATTTCCGATTCCTGTTATGAAAAAG 1746 |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1598 ACCCAAGATTATTGTGTTCATTGGGTGATGTTACGATTAACGATTCCTGTTATGAAAAAG 1657 Query 1747 CCCTGGAAGTTTCAAATGACAAATCAGTTCGTGCTAAGCGGGCTCTTGCTCGAAGCGCAT 1806 |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| | Sbjct 1658 CCCTGGAAGTTTCAAATGACAAGTCAGTTCGTGCTAAGCGGGCTCTTGCTCGCAGCGCCT 1717 Query 1807 ACAATCGCGGTGATTTTGAGAAGTCGAAGATACTGTGGGAGGCTGCAATGGCGTTAAATT 1866 |||||||||||||||||||||||||||||||||||||||||||||||||| | || |||| Sbjct 1718 ACAATCGCGGTGATTTTGAGAAGTCGAAGATACTGTGGGAGGCTGCAATGTCCTTGAATT 1777 Query 1867 CTCTGTATTCAGATGGTTGGTTTGCTCTTGGTGCTGCTGCGTTGAAGGCCAGGGATCTTC 1926 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct 1778 CTCTGTATCCAGATGGTTGGTTTGCTCTTGGTACTGCTGCGTTGAAGGCCAGGGATGTTC 1837 Query 1927 AGAAAGCACTGGATGCATTCACTTTAGCTGTTCATCTTGATCCTGACAATTGGCTGGCTT 1986 ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct 1838 AGAAAGCACTGGATGCATTCACTTTCGCTGTTCATCTTGATCCTGACAATTGGCAGGCTT 1897 Query 1987 GGAACAACATTGCT 2000 |||||||||||||| Sbjct 1898 GGAACAACATTGCT 1911 Score = 296 bits (160), Expect = 6e-79 Identities = 208/231 (90%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 2453 AGAAATGTGGAAAGACAAAGAGCGTTTCAAGAAGTTTGCAAGAGCATCATTGGAACTTTG 2512 |||| ||||||||||| | || |||||||||||||||||||||||||||||||||||||| Sbjct 2343 AGAAGTGTGGAAAGACGACGACCGTTTCAAGAAGTTTGCAAGAGCATCATTGGAACTTTG 2402 Query 2513 TAGAGTGTACATAGAGATCTCAGCGTCTGT-AGAAAGCAAACGAGAACTGTTTAGTGCTG 2571 |||||||||||| ||||| |||| ||| | || ||||| |||||||||||| ||||||| Sbjct 2403 TAGAGTGTACATGGAGATGTCAGTGTC-GACAGGAAGCAGACGAGAACTGTTGAGTGCTG 2461 Query 2572 AGATGCATTTGAAGAACACAATCAAACAAGCTAGAAAGAGCTTTG-GTGAGACTGAAGAA 2630 ||||||||||||||||||||||||||||||||||| ||||||| | || |||| |||| Sbjct 2462 AGATGCATTTGAAGAACACAATCAAACAAGCTAGAGAGAGCTTCCCG-GATACTGCAGAA 2520 Query 2631 TTGAAGGAGCTTGAAAGTTGCCTTGAGGAGGTCAGAAATGTTACGCAGAAG 2681 ||||| |||||||||||||||||||||||||| |||||||||| ||||||| Sbjct 2521 TTGAAAGAGCTTGAAAGTTGCCTTGAGGAGGTGAGAAATGTTATGCAGAAG 2571 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 108176295800 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5