BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G37160.1 Length=2616 Score E Sequences producing significant alignments: (Bits) Value Ahg493692 jgi|Araly1|493692|fgenesh2_kg.7__3125__AT5G37160.1 3251 0.0 Ahg891304 jgi|Araly1|891304|Al_scaffold_0007_3290 1173 0.0 Ahg947346 jgi|Araly1|947346|scaffold_703575.1 1053 0.0 Ahg355656 jgi|Araly1|355656|fgenesh1_pg.C_scaffold_7002829 915 0.0 > Ahg493692 jgi|Araly1|493692|fgenesh2_kg.7__3125__AT5G37160.1 Length=2604 Score = 3251 bits (1760), Expect = 0.0 Identities = 2345/2621 (89%), Gaps = 66/2621 (3%) Strand=Plus/Plus Query 1 ATGGACACTAAAGAGATACGAAAGCTCTTGGaaaaaaaCGAGCAAACAAGTCTTTTCGCT 60 ||||| | ||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct 1 ATGGATAATAAAGAGATACGAAAGCTCTTGGAAAATAACGAGCAAACAAGTCTGTTCGCT 60 Query 61 AGACTATGTTCTTGGTC-ACTCAAAGATATCCTCAACGAAGATCTCTCCAAGGAAAAGAT 119 ||| ||||||||||||| | |||||||||| |||||||||||||||| ||| |||||| | Sbjct 61 AGAGTATGTTCTTGGTCTA-TCAAAGATATTCTCAACGAAGATCTCTACAAAGAAAAGTT 119 Query 120 AATGACAATACCAGACAGATTTAGTTCCGTTGATGAATACTCTCAGTGTTTTGTTCCTCA 179 || ||||||||||||||||||||||| || |||||||||| |||||||||||||||||| Sbjct 120 AAAAACAATACCAGACAGATTTAGTTCTGTCGATGAATACTTTCAGTGTTTTGTTCCTCA 179 Query 180 TTTACTCGAGGAAACACGAACTGAGTTGTTCTCGAGCTTCAGATCTTTATCGAAATCTCC 239 ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||| Sbjct 180 TTTACTCGAGGAAACACGAACCGAGTTGTTCTCGAGCTTCATATCTTTATCGAAAGCTCC 239 Query 240 TGTCTCACGAATACTTTCTGTGGAGACAAAAG-TGAT-TGAATATAGTGGAAGGTCATCG 297 |||| |||||||||||||| ||||| |||| | || ||||| |||||||||||||||| Sbjct 240 CGTCTGTCGAATACTTTCTGTTGAGAC-AAAGAT-ATATGAATTTAGTGGAAGGTCATCG 297 Query 298 ATCAAG-TGGTTCCATGATATTAAATTAATGGATTATGCAGACGATAAAAACGAAATA-T 355 |||||| | |||||||||||||||||||||||||||||||||||| |||| |||| | | Sbjct 298 ATCAAGAT-GTTCCATGATATTAAATTAATGGATTATGCAGACGACAAAAGTGAAA-AGT 355 Query 356 ATGAGCCAAAGTGTGGAGATATTATTGCACTGAGTCCTCTGAGTTTGACAGAAGAAAGGC 415 | |||||||||||||||||||| |||||| |||||||||||||||||||||| ||||| | Sbjct 356 ACGAGCCAAAGTGTGGAGATATAATTGCATTGAGTCCTCTGAGTTTGACAGAGGAAAGAC 415 Query 416 CAAGAATCGATGACTTGGATCCTTTACTTCTAGGTTACGTTTTCTCTGTGTATGGTGATT 475 ||||||| ||| ||||| |||||||||||||||||||||| |||||||||| |||||||| Sbjct 416 CAAGAATTGATTACTTGAATCCTTTACTTCTAGGTTACGTCTTCTCTGTGTTTGGTGATT 475 Query 476 CTAAAATCTCTGTTCACTTCTCTAGATCCATTTCTCAGAGTGAGAAACATACATTTTGCA 535 ||||||||||||||||||||||||||| || |||||||||||||||||| ||||| || Sbjct 476 ATAAAATCTCTGTTCACTTCTCTAGATCAATCTCTCAGAGTGAGAAACATTCATTTCGCT 535 Query 536 CAGGTGTTTTTCTCATTAATATAACCACAAACACTCGAATTTGGAACGCTTTACACAAGG 595 | ||| | |||||||| | | ||||||||||||||||||||||||||||||| ||||| | Sbjct 536 CTGGTATATTTCTCATGACTTTAACCACAAACACTCGAATTTGGAACGCTTTGCACAACG 595 Query 596 ATGCTGCCGATTCCACTCTGATCCAGAGTGTCCTTCAGGAAGATGCTTCGGCTACAGAAC 655 | | ||||||||| |||| | | | | | | ||| | | |||||||||| Sbjct 596 AAGTTGCCGATTCTACTC---T--A-A---T-C--C----AGA-G--T--GCTACAGAAC 634 Query 656 AATGTTTTTCTTGTGAAAATGATGTTGATGGTTCTGATTCTGACCGTGTTGTCGATATAA 715 |||| |||||||||| |||||||| ||||||||||||||||||| ||||| | |||| || Sbjct 635 AATGCTTTTCTTGTGGAAATGATGATGATGGTTCTGATTCTGACAGTGTTTTGGATAGAA 694 Query 716 TACGTTCAGCAAAACTGAACTCTTCCCAAGAAGCTGCGATTTTGGGTTTCCTTAAGACAA 775 | ||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||| Sbjct 695 TTCGTTCAGCAAAACTGAACTCTTCCCAAGAAGCTGCAATTTTTGGTTGCCTTAAGACAA 754 Query 776 GGAATTGTAAACACAAGGAGAGTGTGAAACTGATATGGGGACCTCCTGGTACAGGC-AAA 834 |||||||||| |||||| ||||||||||||||||||||||||||||||| | || ||| Sbjct 755 GGAATTGTAATCACAAGAAGAGTGTGAAACTGATATGGGGACCTCCTGG---A-GCAAAA 810 Query 835 ACA-AAGACGGTCGCGACACTTCTCTCTACTCTTATGCAACTAAAGTGCAAAACAGTTGT 893 ||| |||| || |||| ||||||||| ||||||| ||||||||||||||||||||||| Sbjct 811 ACACAAGA-TATCACGACTCTTCTCTCTGCTCTTATCCAACTAAAGTGCAAAACAGTTGT 869 Query 894 ATGTGCTCCTACAAACACAACTATTGTAGCAGTAGCGTCAAGGTTATTATCTTTATCTAA 953 |||||||||||||||||| ||||||| ||||| || || |||||||| |||||||||| Sbjct 870 GTGTGCTCCTACAAACACAGCTATTGTTGCAGTTGCATCGAGGTTATTGGCTTTATCTAA 929 Query 954 GGAAACAATTGTGTGTGCTCCAACCAACTCGGCTATCGCAGAAGTAGTATCAAGGTTCGA 1013 ||||||||||||||||||||| || ||||| ||||| || ||||| |||||||||||| Sbjct 930 GGAAACAATTGTGTGTGCTCCTACAAACTCTGCTATTGCTGAAGTGGTATCAAGGTTC-- 987 Query 1014 ATTCTCTACCTTATTCTATGGAACTTCTATATTAGAACGTACCACTTACGGTATGGGGAA 1073 || | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 988 --TC-GT-CCTTATTCTATGGAACTTCTATATTAGAACGTACCACTTACGGTATGGGGAA 1043 Query 1074 TATAGTTCTATCTGGAAACCGCGAGAGAATGGGAATTACGAGCAATAAAGTTCTTCTCAA 1133 ||||||||||||||| |||||||| |||||||| |||| || |||||||||||||||||| Sbjct 1044 TATAGTTCTATCTGGTAACCGCGAAAGAATGGGGATTAAGAACAATAAAGTTCTTCTCAA 1103 Query 1134 TGTGTTTTTTAATGACCGCGTTAGTAAACTTGGTAGACTGTTTTTATCTACTTGTGGATG 1193 ||||||||| ||||| || |||||||||||||| ||||| ||||| ||||| |||||||| Sbjct 1104 TGTGTTTTTCAATGATCGTGTTAGTAAACTTGGCAGACTCTTTTTGTCTACATGTGGATG 1163 Query 1194 GAAGAAGAGGTTAGAGTCAATCATAGATTTTCTTGAGAACACAGAGACTAAGTACGAGCA 1253 |||||||||||| |||||| ||||||||||||||||||| |||||| ||||||| ||||| Sbjct 1164 GAAGAAGAGGTTGGAGTCAGTCATAGATTTTCTTGAGAATACAGAGGCTAAGTATGAGCA 1223 Query 1254 ACATGTAAATGAACTAG-AG--CTtgaaagaatgacagaagatgaaaagaa-gaag--g- 1306 ||||||| ||||| ||| || ||| | || || ||||| || ||||| |||| | Sbjct 1224 ACATGTACATGAATTAGAAGAACTTCATAGGATTTTGGAAGAGGAGAAGAAGGAAGATGA 1283 Query 1307 -aagaag-ttg-aa--gagaggacgatgcaagaagTTG---ATATGGCTGATTTGAGCAC 1358 |||||| | || || | || || | |||||| || |||||| ||||||| |||| Sbjct 1284 AAAGAAGAAAGAAACCGAAAAGAAGAAGGAAGAAGCTGAAAATATGGTTGATTTGTGCAC 1343 Query 1359 TCATCTGCCTAAGTCTTTCATTTCATCTAAAGATGTCAAGAATTTGATAGCAGCCTGCCA 1418 |||||| ||||||||||||||||||||||||||||| |||||| ||||||||||| |||| Sbjct 1344 TCATCTACCTAAGTCTTTCATTTCATCTAAAGATGTGAAGAATATGATAGCAGCCCGCCA 1403 Query 1419 AGCGCTTCACCGTGTTAGATATTTCTTGCAGGAGAATTCTTCTAGAGATGATTTCAAGAA 1478 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct 1404 AGCGCTTCACCGTGTTAGAGATTTCTTGCAGGAGAATTCATCTAGAGATGATTTCAAGAA 1463 Query 1479 AGGTGGTTTTAGATTCAATTGCTTCAACAAACTCATCAGTGTTGATGCCCTTCAGGCTCT 1538 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||| Sbjct 1464 AGGTGGTTTTAGATTCAATTGCTTTAACAAACTCATCAGTGTTGATGCTATTGAGGCTCT 1523 Query 1539 CTGTCTACTTCCAAAATGTTTTGGGATTTTTGGTTTAGCAAATAATGAAGATATTA-GAA 1597 |||||||||||||||||||||||||||||||| |||| |||| |||||||||| | ||| Sbjct 1524 ATGTCTACTTCCAAAATGTTTTGGGATTTTTGGCTTAGAAAATTATGAAGATATCAGGAA 1583 Query 1598 AGTTTTGTCTACAAAATGCTGACATAATATTCTGCACAGCCTCAAGTGTTGCTAATATCA 1657 | ||||||||||||||||| || ||||| ||||||||||||||||||| || ||||| Sbjct 1584 A-TTTTGTCTACAAAATGCAGATATAATCCTCTGCACAGCCTCAAGTGTGGCCAATATGG 1642 Query 1658 ATCCGGCGAGGATAGGCTCTGTGGACCTTCTTGTGGTAGATGAGACAGCTCAGCTTAAGG 1717 ||||| |||||||||||||| |||||||| ||||| |||||| ||||||||||||| | Sbjct 1643 TTCCGGAAAGGATAGGCTCTGTCGACCTTCTCGTGGTCGATGAGGCAGCTCAGCTTAAAG 1702 Query 1718 AATGTGAATCAGTTGCTGCATTGCAACTTCCTGGACTTTGTCATGCTCTTCTAATAGGAG 1777 |||||||||||||| | ||||||||||||||||||||| ||||||| ||||||||||||| Sbjct 1703 AATGTGAATCAGTTACCGCATTGCAACTTCCTGGACTTCGTCATGCGCTTCTAATAGGAG 1762 Query 1778 ATGAGTATCAGTTGCCTGCAATGGTTCATAACGAGGAATGCGATAAGGCGAAATTCGGAA 1837 ||||||||||||| |||||||||||||| | | |||||||||| |||||||||||||||| Sbjct 1763 ATGAGTATCAGTTACCTGCAATGGTTCACAGCAAGGAATGCGAAAAGGCGAAATTCGGAA 1822 Query 1838 GAAGCTTGTTTGAGAGATTGGTTTTGATTGGTCATAGCAAACATTTGCTTAATGTTCAGT 1897 |||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||| | Sbjct 1823 GAAGCTTGTTCGAGAGATTGGTTTTGATTGGTCATAACAAACATTTGCTAAATGTTCAAT 1882 Query 1898 ATCGAATGCATCCTTCCATTAGTCGTTTCCCTAATAAGGAGTTTTATGGTGGGAGAATCA 1957 |||| ||||||||||| |||||| |||||||||||||||||||||||| ||||||||||| Sbjct 1883 ATCGGATGCATCCTTCGATTAGTTGTTTCCCTAATAAGGAGTTTTATGATGGGAGAATCA 1942 Query 1958 CTGATGC-TGCAAATGTTCAAGAAAGCATTTACGAGAAGAGGTTTCTTCAAGGAAACATG 2016 ||||||| | | | |||||||||| |||||||||| ||| |||||||||| ||||| ||| Sbjct 1943 CTGATGCAT-CGATTGTTCAAGAACGCATTTACGAAAAGCGGTTTCTTCAGGGAAAAATG 2001 Query 2017 TTTGGTACTTTCTCATTTATCAATGTGGGACGTGGGAAAGAAGAGTTTGGTGATGGACAT 2076 |||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 2002 TTTGGTTCTTTCTCTTTTATCAATGTGGGACGTGGGAAAGAAGAGTTTTGTGATGGACAT 2061 Query 2077 AGTCCCAAAAACATGGTTGAAGTTGCTGTCATTTCCAAAATCATATCCAATCTTTTCAAA 2136 ||||| || || |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 2062 AGTCCTAAGAATATGGTTGAAGTTGCTGTCATTTCCGAAATCATATCCAATCTTTTCAAA 2121 Query 2137 GTTTCAAGTCAAAGGAAGCAGAAGATGAGTGTAGGAGTTATTTCACCTTACAAGGGACAA 2196 |||||||||| ||| || |||||||||||||| ||||| ||||||||||||||||||||| Sbjct 2122 GTTTCAAGTCTAAGAAACCAGAAGATGAGTGTTGGAGTGATTTCACCTTACAAGGGACAA 2181 Query 2197 GTGAGAGCAATCCAAGAGAGAGTTGGTGATAAGTACAATTCCTTATCAGTTGATCAGCTT 2256 |||||||| |||||||||||| |||||||||||||| ||||||||||| | ||||||| Sbjct 2182 GTGAGAGCTATCCAAGAGAGAATTGGTGATAAGTACGGTTCCTTATCAG--G-TCAGCTT 2238 Query 2257 TTCACTTTGAATGTTCAATCGGTAGATGGGTTTCAAGGAGGAGAAGTAGACGTTATCATC 2316 |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct 2239 TTCACTTTGAATGTTCAATCGGTAGATGGGTTTCAAGGAGGAGAAGAAGACATTATCATC 2298 Query 2317 ATCTCTACCGTTAGATGTAACGTTAACGGAAACGTGGGATTTCTCAGTAACCGTCAAAGA 2376 ||||||||||||||| |||||||||| ||||||||||||||||| ||||||| ||||||| Sbjct 2299 ATCTCTACCGTTAGAAGTAACGTTAATGGAAACGTGGGATTTCTAAGTAACCATCAAAGA 2358 Query 2377 GCTAACGTGGCATTGACTCGTGCAAGACATTGTTTATGGGTGATTGGTAACGGGACCACT 2436 || || |||||| ||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 2359 GCCAATGTGGCACTGACTCGTGCAAGACATTGTTTATGGGTGATTGGTAACGAGACCACT 2418 Query 2437 TTGGCTCTAAGTGGTTCCATTTGGGCAGAACTTATAAGTGAGTCTAGGACACGTGGATGC 2496 ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| Sbjct 2419 TTGGCTCTAAGTGGTTCGATTTGGGCAGAACTTATAAGTGAGTCGAGGACACGTGGATGC 2478 Query 2497 TTCTACGATGCTGTAGATGATAAGAATCTAAGAGATGCCATGAGTGATGCTTTGCTTGAT 2556 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2479 TTCTACGATGCTGTTGATGATAAGAATCTAAGAGATGCCATGAGTGATGCTTTGCTTGAT 2538 Query 2557 GATGTGTCTTCGAGTTTTGGATCTTTGTCGATTAGGAATGG 2597 |||||||||||||||||||||||||| || ||||||||||| Sbjct 2539 GATGTGTCTTCGAGTTTTGGATCTTTTTCCATTAGGAATGG 2579 > Ahg891304 jgi|Araly1|891304|Al_scaffold_0007_3290 Length=2457 Score = 1173 bits (635), Expect = 0.0 Identities = 1069/1275 (84%), Gaps = 43/1275 (3%) Strand=Plus/Plus Query 1340 ATATGGCTGATTTG-AGCACTCATCTGCCTAAGTCTTTCATTTCATCTAAAGATGTCAAG 1398 |||| | ||||||| | ||||||||| || ||||||||| |||| ||| || | || || Sbjct 1184 ATATTGTTGATTTGTA-CACTCATCTTCCCAAGTCTTTCGTTTCGTCTGAACAAGTGGAG 1242 Query 1399 AATTTGATAGCAGCCT-GCCAAGCGCTTCACCGTGTTAGATATTTCTTGCAGGAGAATTC 1457 | | || | |||| || | |||| ||||| || || |||||||||||||| ||||||| Sbjct 1243 AGTATGGTCGCAG-CTCGTCAAGTTCTTCAGCGCGTAAGATATTTCTTGCAAGAGAATTT 1301 Query 1458 TTCTAGAGATGATTTCAAGAAAGGTGGTTTTAGATTCAATTGCTTCAACAAACTCATCAG 1517 ||||||| ||||| ||||||| || ||||| | ||| ||||||| | ||| ||||| Sbjct 1302 TTCTAGATATGATCTCAAGAAGGGAGGTTTCAAATTTGATTGCTT-TA-AAA-GAATCAG 1358 Query 1518 TGTTGA-TGCCCTTCAGGCTCT-CTGTCTACTTCCAAAATGTTTTGGGATTTTTG-GTT- 1573 || ||| || | ||||| |||| | || ||||||| || |||||| ||||| | || Sbjct 1359 TGCTGATTG-CGTTCAGACTCTAC-GTTTACTTCCGCAACGTTTTGAGATTTCAGACTTG 1416 Query 1574 TAGCAAATAATGAAGATATTAGAAA-GTTTTGTCTACAAAATGCTGACATAATATTCTGC 1632 | | || || |||||| | ||| ||||||||||| ||||| || ||||| |||||| Sbjct 1417 TTG-GAA-AACAAAGATA-CAAAAACATTTTGTCTACAGAATGCAGATATAATCTTCTGC 1473 Query 1633 ACAGCCTCAAGTGTTGCTAATATCAATCCGGCGAGGATAGGCTCTG-TGGACCTTCTTGT 1691 ||||| ||| ||| ||| |||| ||||||| |||| ||| || | | ||||||||||| Sbjct 1474 ACAGCATCAGGTGCTGCGGATATGAATCCGGTAAGGACAGGATC-GATCGACCTTCTTGT 1532 Query 1692 GGTAGATGAGACAGCTCAGCTTAAGGAATGTGAATCAGTTGCTGCATTGCAACTTCCTGG 1751 ||| |||||| | ||||||||||| |||||||||||||||||||| ||||||||| |||| Sbjct 1533 GGTTGATGAGGCGGCTCAGCTTAAAGAATGTGAATCAGTTGCTGCTTTGCAACTTTCTGG 1592 Query 1752 ACTTTGTCATGCTCTTCTAATAGGAGATGAG-TATCAGTTGCCTGCAATGGTTCATAACG 1810 |||| |||||||| |||| |||||||||||| | ||||||||||||||| | | | | Sbjct 1593 ACTTCGTCATGCTGTTCTTATAGGAGATGAGCT-TCAGTTGCCTGCAAT-GAT-GTGGC- 1648 Query 1811 AGGA-ATGCGATAAGGCGAAATTCGGAAGAAGCTTGTTTGAGAGATTGGTTTTGATTGGT 1869 | || ||| || ||||| ||||||||||| || ||||| ||||| |||||| || ||||| Sbjct 1649 A-GATATGTGAAAAGGCAAAATTCGGAAGCAGTTTGTTCGAGAGGTTGGTTCTGCTTGGT 1707 Query 1870 CATAGCAAACATTTGCTTAATGTTCAGTATCGAATGCATCCTTCCATTAGTCGTTTCCCT 1929 || | ||| ||||||||||||||||| || |||||||||||||| ||||||||||||||| Sbjct 1708 CACAACAAGCATTTGCTTAATGTTCAATACCGAATGCATCCTTCGATTAGTCGTTTCCCT 1767 Query 1930 AATAAGGAGTTTTATGGTGGGAGAATCACTGATGCTGCAAATGTTCAAGAAAGCATTTA- 1988 ||||| ||||| |||||||||| ||||| |||||||| |||||||||||||||||||| Sbjct 1768 AATAAAGAGTTCTATGGTGGGAAAATCAAAGATGCTGCGAATGTTCAAGAAAGCATTTAT 1827 Query 1989 CGAGAAGAGGTTTCTTCAAGGAAACATGTTTGGTACTTTCTCATTTATCAATGTGGGACG 2048 | | ||||||||||||||||| |||||||||||| ||||||| ||||||||||| |||| Sbjct 1828 C-AAAAGAGGTTTCTTCAAGGGAACATGTTTGGTTCTTTCTCTTTTATCAATGTTGGAC- 1885 Query 2049 TGGGA-AAGAAGAGTTTGGTGATGGACATAGTCCCAAAAACATGGTTGAAGTTGCTGTCA 2107 | ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct 1886 TTGGAGAAGAAGAGTTTGGTGATGGACATAGTCCTAAAAACATGGTTGAAGTTGCTGTGA 1945 Query 2108 TTTCCAAAATCATATCCAATCTTTTCAAAGTTTCAAGTCAAAGGAAGCAGAA-GATGAGT 2166 |||| |||||||||| ||||||||||||||||||||| |||| ||| | || |||||| Sbjct 1946 TTTCTGAAATCATATCAAATCTTTTCAAAGTTTCAAGTGAAAG-AAGAATAAAGATGAGC 2004 Query 2167 GTAGGAGTTATTTCACCTTACAAGGGACAAGTGAGAGCAATCCAAGAGAGAGTTGGTGAT 2226 || ||||| |||| || ||||| |||||||| |||||||||||||||||| || Sbjct 2005 GTTGGAGTGGTTTCTCCATACAAAGGACAAGTCAGAGCAATCCAAGAGAGAACCAAAAAT 2064 Query 2227 AAGTACAATTCCTTATCAGTTGATCAGCTTTTCACTTTGAATGTTCAATCGGTAGATGGG 2286 ||||||| || ||||||| ||| |||||||||||||||||||| |||||||||||| Sbjct 2065 AAGTACAGCTCTTTATCAGGTGA---GCTTTTCACTTTGAATGTTCGGTCGGTAGATGGG 2121 Query 2287 TTTCAAGGAGGAGAAGTAGACGTTATCATCATCTCTACCGTTAGATGTAACGTTAACGGA 2346 |||||||| || |||| ||| |||||||||||||||||||||||| |||||| ||| ||| Sbjct 2122 TTTCAAGGTGGGGAAGAAGATGTTATCATCATCTCTACCGTTAGAAGTAACGGTAATGGA 2181 Query 2347 AACGTGGGATTTCTCAGTAACCGTCAAAGAGCTAACGTGGCA-TTGACTCGTGCAAGACA 2405 || ||||||||||||| |||||||||||||| || |||||| || ||||| ||||| || Sbjct 2182 AAAGTGGGATTTCTCAACAACCGTCAAAGAGCCAATGTGGCACTT-ACTCGAGCAAGGCA 2240 Query 2406 TTGTTTATGGGTGATTGGTAACGGGACCACTTTGGCTCTAAGTGGTTCCATTTGGGC-AG 2464 ||||||||||||| ||||||| | ||| |||||||||||||||||||| |||||||| | Sbjct 2241 TTGTTTATGGGTGGTTGGTAATGAGACAACTTTGGCTCTAAGTGGTTCGATTTGGGCTA- 2299 Query 2465 AACTTATAAGTGAGTCTAGGACACGTGGATGCTTCTACGATGCTG-TAGATGATAAGAAT 2523 |||| |||||||||||||||||||||||||| ||||| |||||| | ||||| |||||| Sbjct 2300 AACTGATAAGTGAGTCTAGGACACGTGGATGTTTCTATGATGCTACT-GATGAGAAGAAT 2358 Query 2524 CTAAGAGATGCCATGAGTGATGCTTTGCTTGATGATGTGTCTTCGAGTTTTGGATCT-TT 2582 ||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||| || Sbjct 2359 CTAAGAGATTCCATGAGTGATGCTTTGCTTGAGGATGTGTCTTCGAGTTTGGGATCTCTT 2418 Query 2583 GTCGATTAGGAATGG 2597 |||||||||||||| Sbjct 2419 -TCGATTAGGAATGG 2432 > Ahg947346 jgi|Araly1|947346|scaffold_703575.1 Length=2500 Score = 1053 bits (570), Expect = 0.0 Identities = 1024/1236 (83%), Gaps = 59/1236 (5%) Strand=Plus/Plus Query 1339 GATATGGCTGATTTGAGCACTCATCTGCCTAAGTCTTTCATTTCATCTAAAGATGTCAAG 1398 ||||||| ||||||| |||| ||||||||||||||||| || || ||||| ||||| ||| Sbjct 1212 GATATGGTTGATTTGTGCACCCATCTGCCTAAGTCTTTGATCTCGTCTAATGATGTGAAG 1271 Query 1399 AATTTGATAGCAGCCT-GCCAAGCGCTTCACCGTGTTAGATATTTCTTGCAGGAGAATTC 1457 || |||||| || || ||||||| |||||||||||||||||||||||||| |||||||| Sbjct 1272 AAAATGATAGAAG-CTCGCCAAGCTCTTCACCGTGTTAGATATTTCTTGCAAGAGAATTC 1330 Query 1458 TTCTAGAG-ATGATTTCAAGAAAGGTGGTTTTAGATTCAATTGCTTCAACAAACTCATCA 1516 ||||| | ||||| |||| || | || || ||||| || || |||||| Sbjct 1331 TTCTA-CGTTTGATTCCAAG-AA-G-GG---AAGTTTCAA-------AA-GAA-TCATCA 1374 Query 1517 GTGTTGA-TGCCCTTCAGGCTCTCTGTCT-ACTTCCAAAATG-TTT-TGG---GATTTTT 1569 ||||||| || | |||| ||| | || | | | || ||| | ||| || | || Sbjct 1375 GTGTTGATTG-CATTCAAGCTTTAAGTTTGA-TACCGAAACGATTTAAGGTTCCAGAATT 1432 Query 1570 GGTTTAGCAAAT-AATGAAGATATTA-GAAAGTTTTGTCTACAAAATGCTGACATAATAT 1627 |||| | |||| || |||||||||| |||| || ||||||||||| || || ||||| | Sbjct 1433 -GTTT-GAAAATGAA-GAAGATATTAGGAAA-TTCTGTCTACAAAACGCGGATATAATCT 1488 Query 1628 TCTGCACAGCCTCAAGTGTTGCTA-ATATCAATCCGGCG--AGGATAGGCTCTGTGGACC 1684 |||| ||||||||| ||| ||| | | || ||| || | |||| ||| ||| || Sbjct 1489 TCTGTACAGCCTCAGGTGCTGC-AGAAATGAAT--GGTGAAAGGACAGGAAATGTAGAAT 1545 Query 1685 TTCTTGTGGTAGATGAGACAGCTCAGCTTAAGGAATGTGAATCAGTTGCTGCATTGCAAC 1744 |||||||||| || ||| | |||||||||||||||||||||||||||||||||||||||| Sbjct 1546 TTCTTGTGGTTGACGAGGCGGCTCAGCTTAAGGAATGTGAATCAGTTGCTGCATTGCAAC 1605 Query 1745 TTCCTGGACTTTGTCATGCTCTTCTAATAGGAGATGAGTATCAGTTGCCTGCAATGGTTC 1804 ||| ||||| |||||||| ||||| |||||||||||| |||||| ||||||||||||| Sbjct 1606 TTCAGGGACTGCGTCATGCTGTTCTACTAGGAGATGAGTTTCAGTTACCTGCAATGGTTC 1665 Query 1805 ATAACGAGGAATGCGATAAGGCGAAATTCGGAAGAAGCTTGTTTGAGAGATTGGTTTTGA 1864 ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct 1666 ATAACGATGAATGCGAAAAGGCGAAATTCGGAAGAAGCTTGTTTGAGAGATTGGTTAC-A 1724 Query 1865 -TTGGTCATAGCAAACATTTGCTTAATGTTCAGTATCGAATGCATCCTTCCATTAGTCGT 1923 |||||||||||||||| |||||| ||||||| ||||||||||| ||||| |||| | || Sbjct 1725 CTTGGTCATAGCAAACACTTGCTTGATGTTCAATATCGAATGCACCCTTCGATTATTAGT 1784 Query 1924 TTCCCTAATAAGGAGTTTTATGGTGGGAGAATCACTGATGCTGCAAATGTTCAAGAAAGC 1983 ||||||||||| ||||| |||||||||||||||| |||||||| ||||||||||||||| Sbjct 1785 TTCCCTAATAAAGAGTTCTATGGTGGGAGAATCAAAGATGCTGCTAATGTTCAAGAAAGC 1844 Query 1984 ATTTACGAGAAGAGGTTTCTTCAAGGAAACATGTTTGG-TACTTTCTCATTTATCAATGT 2042 |||||||| ||| | | ||||||||||||||||||||| | ||| ||| ||||||||||| Sbjct 1845 ATTTACGAAAAGCGATATCTTCAAGGAAACATGTTTGGCTCCTT-CTCGTTTATCAATGT 1903 Query 2043 GGGACGTGGGAAAGAAGAGTTTGGTGATGGACATAGTCCCAAAAACATGGTTGAAGTTGC 2102 || | ||| |||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct 1904 AGGTCATGGAAAAGAAGAGTTTGGTGATGGGCATAGTCCCAAGAACATGGTTGAAGTTGC 1963 Query 2103 TGTCATTTCCAAAATCATATCCAATCTTTTCAAAGTTTCAAGTCAAAGGAAGCAG-AAGA 2161 ||| ||||| ||||| |||| ||||||||||||||||||||| |||| ||| | || | Sbjct 1964 TGTGATTTCTGAAATCCTATCAAATCTTTTCAAAGTTTCAAGTGAAAGAAAG-ATTAATA 2022 Query 2162 TGAGTGTAGGAGTTATTTCACCTTACAAGGGACAAGTGAGAGCAATCCAAGAGAGAGTTG 2221 ||||||| ||||| ||| ||||||| || ||||||||||||||||||||||| ||| | Sbjct 2023 TGAGTGTTGGAGTGATTACACCTTATAAAGGACAAGTGAGAGCAATCCAAGACAGAATCA 2082 Query 2222 GT-GATAAGTACAATTCCTTATCAGTTGATCAGCTTTTCACTTTGAATGTTCAATCGGTA 2280 | |||||||||| ||||||||||| ||| ||||||||| |||||||||| |||||| Sbjct 2083 -TAGATAAGTACAGTTCCTTATCAGGTGA---GCTTTTCACATTGAATGTTCGGTCGGTA 2138 Query 2281 GATGGGTTTCAAGGAGGAGAAGTAGACGTTATCATCATCTCTACCGTTAGATGTAAC-GT 2339 |||||||||||||| || |||| ||| |||||||||||||| ||||||||| ||||| || Sbjct 2139 GATGGGTTTCAAGGTGGTGAAGAAGATGTTATCATCATCTCCACCGTTAGAAGTAACTGT 2198 Query 2340 TAAC-GGAAACGTGGGATTTCTCAGTAACCGTCAAAGAGCTAACGTGGCATTGACTCGTG 2398 ||| |||| || |||||||||||||||||||||||||| |||||||| | ||||| | Sbjct 2199 -AACAGGAAG-GTTGGATTTCTCAGTAACCGTCAAAGAGCCAACGTGGCGCTCACTCGAG 2256 Query 2399 CAAGACATTGTTTATGGGTGATTGGTAACGGGACCACTTTGGCTCTAAGTGGTTCCATTT 2458 | ||||| ||||||||||||||||| || | ||| || | |||| |||||||| |||| Sbjct 2257 CTAGACACTGTTTATGGGTGATTGGAAATGAGACAACACTAGCTCGGAGTGGTTCAATTT 2316 Query 2459 GGGCAGAA-CTTATAAGTGAGTCTAGGACACGTGGATGCTTCTACGATGCTGTAGATGAT 2517 |||| ||| ||| |||| || || | || |||| ||||||||| |||||| ||||||| Sbjct 2317 GGGC-GAAACTTGTAAGGGACTCGAAGAGACGTAAATGCTTCTATGATGCTAAAGATGAT 2375 Query 2518 AAGA-ATCTAAGAGATGCCATGAGTGATGCTTTGCT 2552 |||| || | ||||||||||||| |||||||||||| Sbjct 2376 AAGAGAT-TGAGAGATGCCATGAATGATGCTTTGCT 2410 Score = 219 bits (118), Expect = 1e-55 Identities = 210/255 (82%), Gaps = 4/255 (2%) Strand=Plus/Plus Query 702 TGTTGTCGATATAATACGTTCAGCAAAAC-TGAACTCTTCCCAAGAAGCTGCGATTTTGG 760 |||| | |||||||| |||||| | ||| |||||||||||||| || |||| || ||| Sbjct 689 TGTTTTGGATATAATCCGTTCAAC-GAACTTGAACTCTTCCCAAAAATCTGCAATCTTGA 747 Query 761 GTTTCCTTAAGACAAGGAATTGTAAACACAAGGAGAGTGTGAAACTGATATGGGGACCTC 820 | | |||| |||| || || ||||||| ||| | ||||||||||||||||||||||||| Sbjct 748 GCTGCCTTGAGACTAGAAACAGTAAACATAAGAACAGTGTGAAACTGATATGGGGACCTC 807 Query 821 CTGGTACAGGCAAAACAAAGACGGTCGCGACACTTCTCTCTACTCTTATGCAA-CTAAAG 879 |||| |||||||||||||||| ||| |||| ||||||||| | ||| | ||| ||| | Sbjct 808 CTGGAACAGGCAAAACAAAGATGGTTTCGACTCTTCTCTCTGCCCTTCT-CAAACTACGG 866 Query 880 TGCAAAACAGTTGTATGTGCTCCTACAAACACAACTATTGTAGCAGTAGCGTCAAGGTTA 939 |||||||||||||| |||||||||||||||||| || |||||| |||| | || ||| || Sbjct 867 TGCAAAACAGTTGTGTGTGCTCCTACAAACACAGCTGTTGTAGAAGTAACATCGAGGCTA 926 Query 940 TTATCTTTATCTAAG 954 || ||||||| ||| Sbjct 927 TTGGCTTTATCGAAG 941 > Ahg355656 jgi|Araly1|355656|fgenesh1_pg.C_scaffold_7002829 Length=2487 Score = 915 bits (495), Expect = 0.0 Identities = 805/950 (85%), Gaps = 40/950 (4%) Strand=Plus/Plus Query 1342 ATGGCTGATTTG-AGCACTCATCTGCCTAAGTCTTTCATTTCATCTAAAGATGTCAAGAA 1400 |||| ||||||| | ||| ||||| || ||||||| |||||||||| ||||||| ||||| Sbjct 1285 ATGGTTGATTTGTA-CACACATCTTCCCAAGTCTTACATTTCATCTCAAGATGTGAAGAA 1343 Query 1401 TTTGATAGCAGCCT-GCCAAGCGCTTCACCGTGTTAGATATTTCTTGCAGGAGAATTCTT 1459 |||| || || | ||||| ||||| ||||| ||||||||||||||||||||||||| Sbjct 1344 AATGATTGC-TTCTCGTCAAGCTCTTCAACGTGTCAGATATTTCTTGCAGGAGAATTCTT 1402 Query 1460 CTAGAGATGATTTC-AAGAAAGGTGGTTTTAGATTCAATTGCTTCAACAA-ACTCATCAG 1517 |||||| ||||||| ||| |||| ||| | ||| |||||||||| || ||||||||| Sbjct 1403 CTAGAGTTGATTTCAAAG-AAGGAAATTTCAAATTTGATTGCTTCAA-AAGACTCATCAG 1460 Query 1518 TGTTGA-TGCCCTT-CAGGCTCT-CTGTCTACTTCCAAAATGTTTTGGGATTTTTGG--- 1571 |||||| || |||| | |||||| | || ||||||||||| |||||| || | || Sbjct 1461 TGTTGATTG-CCTTGC-GGCTCTAC-GTTTACTTCCAAAACGTTTTGAGA-TACCGGACA 1516 Query 1572 T-TTAGCAAATAATGAAGATATTA-GAAAGTTTTGTCTACAAAATGCTG-ACATAATATT 1628 | || | || || |||||||||| |||| ||||| |||||||| || | | ||||| | Sbjct 1517 TGTT-G-GAA-AACGAAGATATTAGGAAA-TTTTGCCTACAAAACGC-GCATATAATCCT 1571 Query 1629 CTGCACAGCCTCAAGTGTTGCT-AATATCAATCCGGCGAGGATAGGCTCTGTGGACCTTC 1687 |||||| || || ||| |||| || || ||||||| |||| ||| | | || |||| Sbjct 1572 CTGCACGGCTTCTGGTGCTGCTGAA-ATGAATCCGGAAAGGACAGGAAATATAGAACTTC 1630 Query 1688 TTGTGGTAGATGAGACAGCTCAGCTTAAGGAATGTGAATCAGTTGCTGCATTGCAACTTC 1747 ||||||| |||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct 1631 TTGTGGTTGATGAGGCCGCTCAGCTTAAGGAATGTGAATCAGTTGCTGCATTGCAACTTA 1690 Query 1748 CTGGACTTTGTCATGCTC-TTCTAATAGGAGATGAGTATCAGTTGCCTGCAATGGTTCAT 1806 ||||| ||| || | || ||||||||||||||| ||| |||||||||||||| ||| Sbjct 1691 AGGGACTGCATCACGC-CATTTTAATAGGAGATGAGTTTCAATTGCCTGCAATGGTACAT 1749 Query 1807 AACGAGGAA-TGCGATAAGGCGAAATTCGGAAGAAGCTTGTTTGAGAGATTGGTTTTGAT 1865 || ||| | || || ||||||||||||||||||||||||||||| |||||||||||| | Sbjct 1750 AATGAG-ATGTGTGAAAAGGCGAAATTCGGAAGAAGCTTGTTTGAAAGATTGGTTTTGCT 1808 Query 1866 TGGTCATAGCAAACATTTGCTTAATGTTCAGTATCGAATGCATCCTTCCATTAGTCGTTT 1925 |||||||| ||||||||||||| ||||||| ||||||||||||||||| ||||||||||| Sbjct 1809 TGGTCATAACAAACATTTGCTTGATGTTCAATATCGAATGCATCCTTCGATTAGTCGTTT 1868 Query 1926 CCCTAATAAGGAGTTTTATGGTGGGAGAATCACTGATGCTGCAAATGTTCAAGAAAGCAT 1985 ||||||||| ||||| |||||||||||||||| |||||||| ||||||||||||||||| Sbjct 1869 CCCTAATAAAGAGTTCTATGGTGGGAGAATCAAAGATGCTGCGAATGTTCAAGAAAGCAT 1928 Query 1986 TTA-CGAGAAGAGGTTTCTTCAAGGAAACATGTTTGGTACTTTCTCATTTATCAATGTGG 2044 || | | |||||||||||||||||||||||||||||| | ||||| ||||||||||| | Sbjct 1929 CTATCAA-AAGAGGTTTCTTCAAGGAAACATGTTTGGTTCATTCTCCTTTATCAATGTTG 1987 Query 2045 GACGTGGGAAAGAAGAGTTTGGTGATGGACATAGTCCCAAAAACATGGTTGAAGTTGCTG 2104 ||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1988 GACGTGGAAAAGAGGAGTTTGGTGATGGACATAGTCCCAAGAACATGGTTGAAGTTGCTG 2047 Query 2105 TCATTTCCAAAATCATATCCAATCTTTTCAAAGTTTCAAGTCAAAGGAAGCA-GAAGATG 2163 ||||||| |||| ||||||||||||||||||||||||||| |||| ||| | ||||||| Sbjct 2048 TCATTTCTGAAATAATATCCAATCTTTTCAAAGTTTCAAGTGAAAG-AAGGATGAAGATG 2106 Query 2164 AGTGTAGGAGTTATTTCACCTTACAAGGGACAAGTGAGAGCAATCCAAGAGAGAGTTGGT 2223 ||||| ||||| |||||||||| || ||||||||||||||||||||||||||| | || Sbjct 2107 AGTGTTGGAGTGGTTTCACCTTATAAAGGACAAGTGAGAGCAATCCAAGAGAGAATCGGA 2166 Query 2224 GATAAGTACAATTCCTTATCAGTTGATCAGCTTTTCAC-TTTGAATGTTC 2272 |||||||||| ||||||||||| | ||| |||||||| ||||||||||| Sbjct 2167 GATAAGTACAGTTCCTTATCAG--G-TCAACTTTTCACGTTTGAATGTTC 2213 Score = 313 bits (169), Expect = 5e-84 Identities = 241/274 (88%), Gaps = 11/274 (4%) Strand=Plus/Plus Query 2351 TGGGATTTCTCAGTAACCGTCAAAGAGCTAACGTGGCATTGACTCGTGCAAGACATTGTT 2410 |||| ||||||||||||||||||||||| ||||||||| ||||||| ||||| ||||||| Sbjct 2217 TGGG-TTTCTCAGTAACCGTCAAAGAGCCAACGTGGCACTGACTCGAGCAAGGCATTGTT 2275 Query 2411 TATGGGTGATTGGTAACGGGACCACTTTGGCTCTAAGTGGTTCCATTTGGGCAGAACTTA 2470 ||||||||||||| || | ||||||||| ||| | |||||||| |||||||| || | | Sbjct 2276 TATGGGTGATTGGAAATGAGACCACTTTAGCTTTGAGTGGTTCGTTTTGGGCAAAAATGA 2335 Query 2471 TAAGTGAGTCTAGGACACGTGGATGCTTCTACGATGCTG-TAGATGATAAGAATCTAAGA 2529 ||||||||||||||||||||||||| ||||||||||||| | ||||| |||||||||||| Sbjct 2336 TAAGTGAGTCTAGGACACGTGGATGTTTCTACGATGCTGCT-GATGAGAAGAATCTAAGA 2394 Query 2530 GATGCCATGAGTGATGCTTTGCTTGATGATGTGTCTTCGAGTTTTGGATCT-TTGTCGAT 2588 |||||||||||||||||||||||||| ||||||||||| |||||||||||| || || || Sbjct 2395 GATGCCATGAGTGATGCTTTGCTTGAGGATGTGTCTTCAAGTTTTGGATCTCTT-TCAAT 2453 Query 2589 TAGGA------ATGGGAGAAGAAATGATTGGTAG 2616 |||| ||||||||||||||| ||||||| Sbjct 2454 CAGGAGTGGCTATGGGAGAAGAAATGCTTGGTAG 2487 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 98653734550 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5