BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G37474.1 Length=243 Score E Sequences producing significant alignments: (Bits) Value Ahg330282 jgi|Araly1|330282|fgenesh1_pm.C_scaffold_7002509 344 2e-94 > Ahg330282 jgi|Araly1|330282|fgenesh1_pm.C_scaffold_7002509 Length=243 Score = 344 bits (186), Expect = 2e-94 Identities = 224/243 (92%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 1 ATGTCAGGACAAAAATACCAGCTTGTTTCTCTGCTATTAATAATCTGCCTTCTTTTCTCT 60 |||||||||||||| ||||| ||||||| |||||||||||| || || |||||||| ||| Sbjct 1 ATGTCAGGACAAAACTACCATCTTGTTTATCTGCTATTAATTATTTGTCTTCTTTTTTCT 60 Query 61 CAATCAACTGCAAGTGGCTGTAATTTCAAAGGCTCTTGTAGAACTGATGACCAGTGCAAA 120 |||||||| ||||| |||||| | |||||||||| ||||||||||||||||||||||||| Sbjct 61 CAATCAACAGCAAGCGGCTGTGAGTTCAAAGGCTTTTGTAGAACTGATGACCAGTGCAAA 120 Query 121 CGCATATGCAGAGGCCATGGGCTAGATCCAAGCTTTCAACTGTGTGTTCCTTATTCTTCA 180 ||||||||||||||||||||| ||||| |||| |||| | |||||||||||||||||||| Sbjct 121 CGCATATGCAGAGGCCATGGGATAGATACAAGGTTTCTATTGTGTGTTCCTTATTCTTCA 180 Query 181 AAGGGAGGCAAATGTTGTTGTTTACATTATGAAGGGGCTCCATTATCAAGCGAAGTAATA 240 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct 181 AAGGGAGGCAAATGTTGTTGTTTACATTATGAAGGGGCTCCATCATCAAGCGAAGAAATA 240 Query 241 TAG 243 ||| Sbjct 241 TAG 243 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 8401417420 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5