BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G37650.1
Length=1824
Score E
Sequences producing significant alignments: (Bits) Value
Ahg891369 jgi|Araly1|891369|Al_scaffold_0007_3355 2617 0.0
Ahg946600 jgi|Araly1|946600|scaffold_702829.1 416 3e-115
Ahg946597 jgi|Araly1|946597|scaffold_702826.1 416 3e-115
Ahg947389 jgi|Araly1|947389|scaffold_703618.1 396 3e-109
> Ahg891369 jgi|Araly1|891369|Al_scaffold_0007_3355
Length=1845
Score = 2617 bits (1417), Expect = 0.0
Identities = 1705/1842 (93%), Gaps = 28/1842 (2%)
Strand=Plus/Plus
Query 1 ATGAAAGCCAGAGAGATTCTTAC-ATCACCAAACCTCGACGGATTAACAATGATCGTCGA 59
||||||||||||||||||||| | | | |||| || ||| || |||||||||||| ||||
Sbjct 1 ATGAAAGCCAGAGAGATTCTTGCGA-CTCCAAGCCACGAAGGTTTAACAATGATCATCGA 59
Query 60 T-AATCTCTACACACGTAAACAATCCGAAGATTACAAAACAGCTCGTACTCTCTACGACT 118
| || |||| ||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 60 TCAA-CTCTTCACACGTAAACAATCCGAAGAATACAAAACAGCTCGTACTCTCTACGATT 118
Query 119 TATTCGTCTCTAACTTCCCAAATTGCTTAACCCTAAAGCTTCTCAAGATCTATCTTTC-T 177
| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct 119 TCTTCGTCTCTAACTTCCCAAATTGCTTAACCCTAAAGCTTCTCAAGATCTATC-TTCAT 177
Query 178 TCTTCCGATCAAGTCCTCAGACTCCGATCAATCGGTCACCTCTCTGAAACTCTCCCCGGT 237
||||||||| ||||||| ||||||||||||||| || |||||||||||||||||||||||
Sbjct 178 TCTTCCGATGAAGTCCTTAGACTCCGATCAATCTGTTACCTCTCTGAAACTCTCCCCGGT 237
Query 238 TTAAGAAACCGCAACTTCAAACTCTCTCTTGTCGCTCTCCATGAAATCAAACCTCTTTTG 297
|||| ||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct 238 TTAACAAATCGCAACTTCAAACTCTCTCTTATCGCTCTCCATGAAATCAAACCGCTTTTG 297
Query 298 ATTTCTTGCTTGACACGGCAGAATCCAAGAAAGTGTGATACTAATTGCTTAAGAGTCATC 357
|||||||||||||||||||| ||||||||||| |||||||| |||| ||||||||||||
Sbjct 298 ATTTCTTGCTTGACACGGCAAAATCCAAGAAAATGTGATACCAATTTCTTAAGAGTCATT 357
Query 358 GTTTCGTTCGTAGCTGAGAATGTTATGAGTTTTTATAATGGAAGATGGGAAGAGCTTAGT 417
||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 358 GTTTCTTTCGTAGCTGAGAATGTTATGAGTTCTTATAATGGAAGATGGGAAGAGCTTAGT 417
Query 418 GAGTATATACTGTTGCTTGTGAATCAAGATCCGATTAGGGCGTTTAGTTACTTCATCGAA 477
||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct 418 GAGTATATACTGTTGCTTGTGAATCAAGATCCGGTTAGGGCGTTTAATTACTTCATCGAA 477
Query 478 TTGCCATTGCTTTACGAGGG-TTTTATTAACCGGTTCTTGGAGAAGTTACGTGAGGAAGT 536
|||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||
Sbjct 478 TTGCCATTGCTTTACG-GGGATTTCATTAACCGGTTCTTGGAGAAGTTACGTGAGGAAGT 536
Query 537 GTATAAGGTTTTGCTTCATCCTGAGAAAAATAAAGAAGAAGCTTGGGTTTTGGCTTTGAC 596
|||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct 537 GTATAAGGTTTTGCTTCATCCTGAGAAAGATAAAGAAGAAGAATGGGTTTTGGCTTTGAC 596
Query 597 ATCTGCTGTTAAAATGGGGATTGAGGTTTCAGATTC-----C--G--T--A-ATGAGAAG 644
||||||||||||||||||||||||| |||| ||||| | | | | |||| ||
Sbjct 597 ATCTGCTGTTAAAATGGGGATTGAGATTTCGGATTCGGAAACGAGATTCGATTTGAGGAG 656
Query 645 AGAGATTCTTCATAATGTTATGAAATCTGCTTTTGAGGTTATGTGGTTAGGGATGGAAAG 704
|||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct 657 AGAGATTCTTCACAATGTTATGAAATCTGCTTTTGAGGTTATGTGGATGGGGATGGAAAG 716
Query 705 AGAGTTTGC-GATAAGAGGGCTTCAATATCTCGATAAGTACCTTGCGAAAGAAGCGAAGT 763
||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||| |
Sbjct 717 AGAGTTT-CTGATAAGAGGGCTTCAATATATCGATAAGTACCTTGCGAAAGAAGCGAAAT 775
Query 764 TGTGTAAATGGAGTAGCAAACAATGCGGTTTTGTTGCAGCGTTTGCATATGCGATCGCAG 823
|||||||||||||||||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct 776 CGTGTAAATGGAGTAGCAAACAATGCGGTTTCGTGGCAGCGTTTGCGTATGGGATCGCAG 835
Query 824 GAGTTGGAACAAGTACTAAGGAAGAAGCCAAGAAGATCTTTGTAATGGTTACAAACATGG 883
|||||||||||| ||| |||||||| || ||||||||||||||||||||||| || ||||
Sbjct 836 GAGTTGGAACAAATACAAAGGAAGATGCTAAGAAGATCTTTGTAATGGTTACGAATATGG 895
Query 884 ATAAGTATGTTCTGAATCCGGCTTTTAAACTCGAACA-TTTTCGTGTTGATAATCAAGAT 942
| |||||||||| ||||||||| || ||||||||||| |||||| |||||||||||||||
Sbjct 896 ACAAGTATGTTCCGAATCCGGCCTTGAAACTCGAACATTTTTCG-GTTGATAATCAAGAT 954
Query 943 CTTGGAGTAGACTCTGACCGTGAATTGTACTACAT-GTTTAGGCAATGTACTCCAATGGA 1001
|||||||| || ||||||||||||||||||||| | ||| ||||| |||||||||||||
Sbjct 955 CTTGGAGTGGAATCTGACCGTGAATTGTACTAC-TACTTTTGGCAACGTACTCCAATGGA 1013
Query 1002 AGTCTTGAGTTTCTTTGCAATACCTGGTTCTGATTATAGGTCTAGAGAGATAGCAATCAA 1061
|||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct 1014 AGTCTTGAGTTTCTTTGCAACATCTGGTTCTGATTATAGGTCTAGAGAGATAGCAATCAA 1073
Query 1062 AAGACTCTATGATTCACTTTGTGATCATACTTCAAGCCAGTGGGAAATAGATGTTTCAGA 1121
|||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||
Sbjct 1074 AAGACTCTATGATTCACTTTGTGATCATACTTCAAGCCTGTTTGAAATAGATGTTGCAGA 1133
Query 1122 GATTAGAGGTCTTCAGCCATTGCTCATTACTTGCCTTAAGGAAGAAGGATTGCCTGAGAA 1181
|||||||| ||||||||||||||| || ||||||||||||||||||||| ||||||||||
Sbjct 1134 GATTAGAGATCTTCAGCCATTGCTTATCACTTGCCTTAAGGAAGAAGGAATGCCTGAGAA 1193
Query 1182 CATATACAAGATTCTTGGTCAGGTGGTGTTCCACGTTGCGCAGGAGACATTCAACTACGA 1241
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1194 CATATACAAGATTCTTGGTCAGGTGGTGTTCCACGTTGCGCAGGAGACATTCACCTACGA 1253
Query 1242 GAAAGACCCGTGGTTCGATCTATGGGACTATATTGGTTCAGAAAGCAAAGTGGAGTTCGA 1301
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct 1254 AAAAGACCCGTGGTTCGATCTATGGGACTATATTGGTTCAGAAAGCAAAGCGGAGTTCAA 1313
Query 1302 GAAAGCGGTTTATATCTTCCAGCGTTTAACAATGTGGCTTGAGTTTAAAGATATTGTTGT 1361
|||||||||||||||||||||| ||||||||||| ||||||| | |||||||||||| ||
Sbjct 1314 GAAAGCGGTTTATATCTTCCAGTGTTTAACAATGCGGCTTGAATATAAAGATATTGTGGT 1373
Query 1362 TCCTGCGATAACTAATCTTCTTCCGGAGATTAACAGAAACCTAACCCCACCAAGAG-AGT 1420
|||||||||||||||||||||||| |||||| ||||||||||||||||||||| || |||
Sbjct 1374 TCCTGCGATAACTAATCTTCTTCCAGAGATTCACAGAAACCTAACCCCACCAA-AGGAGT 1432
Query 1421 TGTTGGTAGATAACAGTAGATGGGTCTTGGCGTTTACGGGTGCGTACTGTTCAGCTATTC 1480
||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||| ||||
Sbjct 1433 TGTTGGTTGATAACAGTAGCTGGGTCTTGGCGTTTACGGGTGCTTACTGTTCAGCAATTC 1492
Query 1481 ACTTGCTAGAGGTCAAAAGTCACGCGGGATACGTAAAGGAGATTGCATATAAGATGATTG 1540
||||||||||||||| |||||||||||||| ||| |||||||||||| |||||||||| |
Sbjct 1493 ACTTGCTAGAGGTCACAAGTCACGCGGGATTCGTTAAGGAGATTGCACATAAGATGATAG 1552
Query 1541 ATTCAGTGAGAGAGCTTGTGGAAAGAGGAATGGAAGTTGGACTTGTGACGAGAGCTTTCA 1600
|||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1553 ATTCTGTGAAAGAGCTTGTGGAAAGAGGAATGGAAGTTGGACTTGTGAGGAGAGCTTTCA 1612
Query 1601 GAGATCTTGAAAGTATTGTCAAAAAACAATGGGTCTGGTACATGACTTGTGAATACAGAT 1660
||||||||||||||||||| | |||||||||| ||||||||||||| | |||||| |||
Sbjct 1613 GAGATCTTGAAAGTATTGTGGAGAAACAATGGGACTGGTACATGACTCGCGAATACCGAT 1672
Query 1661 TCCTTAAGGGTTTGCTTTGGAGGCTCTACGCGATCAATGGCATGAAAAGGGAAAGTAAGT 1720
||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct 1673 TCCTTAAGGGTTTGCTTTGGAGGCTCTACGCGATCAAAGGCATGAAAATGGAAAGTAAGT 1732
Query 1721 ATGTGTTGTGGAGAATCAATGTTGATATTGAGAGGTCAGTGGATGAAAATCTTAAAGTGC 1780
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct 1733 ATGTGTTGTGGAGAATCAATGTTAATATTGAGAGGTCAGTGGATAAAAATCTTAAAGTGC 1792
Query 1781 TCCCAAAGAGTGAATTTGATTGGCTTAACCAACCTAAGCCTT 1822
||||||||||||| ||||||||||| |||| |||| ||||||
Sbjct 1793 TCCCAAAGAGTGAGTTTGATTGGCTGAACCTACCTGAGCCTT 1834
> Ahg946600 jgi|Araly1|946600|scaffold_702829.1
Length=1219
Score = 416 bits (225), Expect = 3e-115
Identities = 623/806 (77%), Gaps = 64/806 (8%)
Strand=Plus/Plus
Query 1037 ATAGGTCTAGAGAGATAGCAATCAAAAGACTCTATGAT-TCACTTTGTGATCATACTTC- 1094
||||||| |||||||||||||||| | ||||| ||| | | ||| ||||| || |||||
Sbjct 412 ATAGGTCCAGAGAGATAGCAATCAGACGACTCAATG-TCTTACTCTGTGACCACACTTCA 470
Query 1095 AAGCCA-GTGGGAAATAGATGTTTCAGAGATTAGAGGTCTTCAGCCATTGCTCAT-TACT 1152
||| | || | ||||||| |||||||||| ||| || || ||||||||||| | ||
Sbjct 471 AAG-AAGGT-GCAAATAGACATTTCAGAGATGAGACAACTCCAACCATTGCTCATCT-CT 527
Query 1153 TGCCTT-AAGGAAGAAGGA-TTGCCTGAGAACA-TATA--CAAGATTCTT-GGTCAGGTG 1206
|| ||| |||||||||||| || ||| |||| |||| ||| | |||| ||| |||||
Sbjct 528 TG-CTTAAAGGAAGAAGGAGTTTCCT-TTAACAGTATATTCAA-AGTCTTAGGTGAGGTG 584
Query 1207 GTGTTCCACGTTGCGCAGGAGACATTCAACT-ACGAGAAAGACCCGTGGTTC-GATCTAT 1264
||| ||| |||||| | |||| || | || | || | || | ||| || || |||
Sbjct 585 GTGAACCATGTTGCGTATGAGATGTTGATCTGCCAAG-AGGAGACATGG-TCTGAGCTAC 642
Query 1265 GGGACTATATTGGTTCAGAAAGCAAAGTGGAG-TTCGAGAA-AGCGGTTTATATCTTCCA 1322
| | ||||| | || | || ||| ||| ||| | || ||||||||||||||||||
Sbjct 643 GCAATTATATAGCATC-G--AGTAAAACAGAGTTTC-A-AAGAGCGGTTTATATCTTCCA 697
Query 1323 GCGTTTAACAATGTG-GCTTGAGTT--TAAAGATATTGTTG-TTCCTGCGAT-AACTAAT 1377
| | ||||||||| | |||| | || | | ||| ||| || |||||| ||| | |||
Sbjct 698 GTGCTTAACAATG-GCGCTT-A-TTGATGACGATTTTG-TGATTCCTGTGATGGA-GAAT 752
Query 1378 CTTCTTCC-GGAGATTAA-CAGAAACCTA-ACCCCACCAAGAGAGTTGTTGGTAGATAAC 1434
||| |||| ||| ||| || || ||| | ||||||||||||||||||||||||||||
Sbjct 753 CTT-TTCCTAAAGA-TAATCACAAGGCTAGA-CCCACCAAGAGAGTTGTTGGTAGATAAC 809
Query 1435 AGTAGATGGGTCTTGGCGTTTACGGGTG-CGTACTGTTCAGCTATTCACTTGCTAGAG-- 1491
||||| |||||||||||||||| ||||| | | |||| ||| ||||||||| |||||
Sbjct 810 AGTAGCTGGGTCTTGGCGTTTATGGGTGGCTTT-TGTTTAGCAATTCACTTGATAGAGAT 868
Query 1492 GTCAAAAGTCACGCGGGATACGTAAAGGAGATTGCATATAAGATGATTGATTC-AGTGAG 1550
||||| || | || | || ||| ||||| |||||| |||||||||| ||||| | | ||
Sbjct 869 GTCAA--GTAAAGCTGAATCCGTTAAGGAAATTGCACATAAGATGATAGATTCTA-TAAG 925
Query 1551 AGAGCTTGTGGAAAGAGGAATGGAAGTTGGACTTGTGACGAGAGCTTTCAGAGATCTTGA 1610
||||||||||| ||||| |||||||||||| |||||| ||||||||| |||||| | ||
Sbjct 926 AGAGCTTGTGGGAAGAGAAATGGAAGTTGGGGTTGTGAGGAGAGCTTTTAGAGATGTGGA 985
Query 1611 AAGTATTGTCAAAAAACAATGGGTCTGGTACA-TGACTTGTGAATACA-GATTCCTTAAG 1668
||| ||||| || ||||||| || ||||||| | || | |||||| | |||||||||
Sbjct 986 AAGCATTGTGAAGAAACAATTGGAATGGTACAGT-ACGAGCCAATACAAG-TTCCTTAAG 1043
Query 1669 GGTTTGCTTTGGAGGCTCTACGCGATCAATGGCATGAAAAGGGAAAGTAAGTAT-GTGTT 1727
||| |||||||||| ||||| || ||||| ||||||||| ||||||||||| || |||||
Sbjct 1044 GGTCTGCTTTGGAGACTCTATGCAATCAAAGGCATGAAATGGGAAAGTAAG-ATTGTGTT 1102
Query 1728 GTGGAGAATCAATGTTGATA-TTG--AGAGGTCAGTGGATGAAAATCTTAAAGTGCTCCC 1784
||||||||||||||| ||| ||| ||||| ||| | ||| | |||| ||| ||
Sbjct 1103 GTGGAGAATCAATGT-GATTGTTGGGAGAGG--AGTTAAAGAAGAGGAAAAAGAGCTACC 1159
Query 1785 AAAGAGTGAATTTGATTGGCTTAACC 1810
| ||| ||| ||||||||||| ||||
Sbjct 1160 AGAGAATGAGTTTGATTGGCTCAACC 1185
> Ahg946597 jgi|Araly1|946597|scaffold_702826.1
Length=1219
Score = 416 bits (225), Expect = 3e-115
Identities = 623/806 (77%), Gaps = 64/806 (8%)
Strand=Plus/Plus
Query 1037 ATAGGTCTAGAGAGATAGCAATCAAAAGACTCTATGAT-TCACTTTGTGATCATACTTC- 1094
||||||| |||||||||||||||| | ||||| ||| | | ||| ||||| || |||||
Sbjct 412 ATAGGTCCAGAGAGATAGCAATCAGACGACTCAATG-TCTTACTCTGTGACCACACTTCA 470
Query 1095 AAGCCA-GTGGGAAATAGATGTTTCAGAGATTAGAGGTCTTCAGCCATTGCTCAT-TACT 1152
||| | || | ||||||| |||||||||| ||| || || ||||||||||| | ||
Sbjct 471 AAG-AAGGT-GCAAATAGACATTTCAGAGATGAGACAACTCCAACCATTGCTCATCT-CT 527
Query 1153 TGCCTT-AAGGAAGAAGGA-TTGCCTGAGAACA-TATA--CAAGATTCTT-GGTCAGGTG 1206
|| ||| |||||||||||| || ||| |||| |||| ||| | |||| ||| |||||
Sbjct 528 TG-CTTAAAGGAAGAAGGAGTTTCCT-TTAACAGTATATTCAA-AGTCTTAGGTGAGGTG 584
Query 1207 GTGTTCCACGTTGCGCAGGAGACATTCAACT-ACGAGAAAGACCCGTGGTTC-GATCTAT 1264
||| ||| |||||| | |||| || | || | || | || | ||| || || |||
Sbjct 585 GTGAACCATGTTGCGTATGAGATGTTGATCTGCCAAG-AGGAGACATGG-TCTGAGCTAC 642
Query 1265 GGGACTATATTGGTTCAGAAAGCAAAGTGGAG-TTCGAGAA-AGCGGTTTATATCTTCCA 1322
| | ||||| | || | || ||| ||| ||| | || ||||||||||||||||||
Sbjct 643 GCAATTATATAGCATC-G--AGTAAAACAGAGTTTC-A-AAGAGCGGTTTATATCTTCCA 697
Query 1323 GCGTTTAACAATGTG-GCTTGAGTT--TAAAGATATTGTTG-TTCCTGCGAT-AACTAAT 1377
| | ||||||||| | |||| | || | | ||| ||| || |||||| ||| | |||
Sbjct 698 GTGCTTAACAATG-GCGCTT-A-TTGATGACGATTTTG-TGATTCCTGTGATGGA-GAAT 752
Query 1378 CTTCTTCC-GGAGATTAA-CAGAAACCTA-ACCCCACCAAGAGAGTTGTTGGTAGATAAC 1434
||| |||| ||| ||| || || ||| | ||||||||||||||||||||||||||||
Sbjct 753 CTT-TTCCTAAAGA-TAATCACAAGGCTAGA-CCCACCAAGAGAGTTGTTGGTAGATAAC 809
Query 1435 AGTAGATGGGTCTTGGCGTTTACGGGTG-CGTACTGTTCAGCTATTCACTTGCTAGAG-- 1491
||||| |||||||||||||||| ||||| | | |||| ||| ||||||||| |||||
Sbjct 810 AGTAGCTGGGTCTTGGCGTTTATGGGTGGCTTT-TGTTTAGCAATTCACTTGATAGAGAT 868
Query 1492 GTCAAAAGTCACGCGGGATACGTAAAGGAGATTGCATATAAGATGATTGATTC-AGTGAG 1550
||||| || | || | || ||| ||||| |||||| |||||||||| ||||| | | ||
Sbjct 869 GTCAA--GTAAAGCTGAATCCGTTAAGGAAATTGCACATAAGATGATAGATTCTA-TAAG 925
Query 1551 AGAGCTTGTGGAAAGAGGAATGGAAGTTGGACTTGTGACGAGAGCTTTCAGAGATCTTGA 1610
||||||||||| ||||| |||||||||||| |||||| ||||||||| |||||| | ||
Sbjct 926 AGAGCTTGTGGGAAGAGAAATGGAAGTTGGGGTTGTGAGGAGAGCTTTTAGAGATGTGGA 985
Query 1611 AAGTATTGTCAAAAAACAATGGGTCTGGTACA-TGACTTGTGAATACA-GATTCCTTAAG 1668
||| ||||| || ||||||| || ||||||| | || | |||||| | |||||||||
Sbjct 986 AAGCATTGTGAAGAAACAATTGGAATGGTACAGT-ACGAGCCAATACAAG-TTCCTTAAG 1043
Query 1669 GGTTTGCTTTGGAGGCTCTACGCGATCAATGGCATGAAAAGGGAAAGTAAGTAT-GTGTT 1727
||| |||||||||| ||||| || ||||| ||||||||| ||||||||||| || |||||
Sbjct 1044 GGTCTGCTTTGGAGACTCTATGCAATCAAAGGCATGAAATGGGAAAGTAAG-ATTGTGTT 1102
Query 1728 GTGGAGAATCAATGTTGATA-TTG--AGAGGTCAGTGGATGAAAATCTTAAAGTGCTCCC 1784
||||||||||||||| ||| ||| ||||| ||| | ||| | |||| ||| ||
Sbjct 1103 GTGGAGAATCAATGT-GATTGTTGGGAGAGG--AGTTAAAGAAGAGGAAAAAGAGCTACC 1159
Query 1785 AAAGAGTGAATTTGATTGGCTTAACC 1810
| ||| ||| ||||||||||| ||||
Sbjct 1160 AGAGAATGAGTTTGATTGGCTCAACC 1185
> Ahg947389 jgi|Araly1|947389|scaffold_703618.1
Length=1939
Score = 396 bits (214), Expect = 3e-109
Identities = 619/809 (77%), Gaps = 50/809 (6%)
Strand=Plus/Plus
Query 1032 TGATTATAGGTCTAGAGAGATAGCAATCAAAAGACTCT-ATGATT-CACTTTGTGATCAT 1089
|||| ||||||| |||||||| ||||||| | |||| | | | || ||| | ||||||
Sbjct 1082 TGATGATAGGTCCAGAGAGATTGCAATCAGACGACT-TGAAG-TTGTACTCTCTGATCAC 1139
Query 1090 ACTTC-AAGCCA-GTGGGAAATAGATGTTTCAGAGATTAGAGGTCTTCAGCCATTGCTCA 1147
| ||| ||| | || ||| ||||| || ||||||| ||| || ||||||||| |||
Sbjct 1140 ATTTCGAAG-AAGGT-GGATATAGACATTGCAGAGATGAGACAACTCCAGCCATTGGTCA 1197
Query 1148 T-TACTTGCCTTAAGGAAGAAGGATTGC-CTGAGAACATATAC-AAGATTCTTGGTCAGG 1204
| | ||||||||||| ||||| || | | |||| | ||| | | ||| | || |||||||
Sbjct 1198 TCT-CTTGCCTTAAGCAAGAAAGAAT-CTCTGACAGCATGTTCAAAG-TACTAGGTCAGG 1254
Query 1205 TGGTGTTCCACGTTGCGCAGGAGACATTC-AACTA-CGAGAAAGACCCGT-GGTTCGATC 1261
||||| |||||||| | | |||| ||| ||| | | || | | | | | || | | ||
Sbjct 1255 TGGTGAACCACGTTGTGTATGAGATGTTCAAAC-ACCAAG-ATGTCGCATGGGAT-GGTC 1311
Query 1262 TATGGGACTATATTGGTTCAG-AAAGCAAAGTGGAG-TTCGAGAAAGCGGTTTATATCTT 1319
|| | || ||||||| || | | |||||| || ||| ||| |||||||||||||||
Sbjct 1312 TACGCGATTATATTGCATC-GCATAGCAAAACAAAGTTTC-AGAGAGCGGTTTATATCTT 1369
Query 1320 CCAGCGTTTAACAATGTGGCTTG-AGTTTAAAGATATTGTTG-TTCCTGCGAT-AACTAA 1376
|||| | || |||| | ||||| || | | ||| ||| || ||| || ||| | ||
Sbjct 1370 CCAGTGCTTGACAACGCCGCTTGAAG-ATGACGATTTTG-TGATTCATGTGATGGA-GAA 1426
Query 1377 TCTTCTTCCGGAGATTAA-CAGAAACCTAACCCCACCAAGAGAGTTGTTGGTAGATAACA 1435
||| || || |||| ||| | || |||| ||||||||||| ||||||||||||||||
Sbjct 1427 TCTCCTCCCAGAGA-TAAGAATAAGGCTAAATCCACCAAGAGACTTGTTGGTAGATAACA 1485
Query 1436 GTAGATGGG-TCTTGGCGTTTACGGGTGCGTACTGTTCAG-CTATTCACTTGCTAGAGGT 1493
|| | |||| | ||||||||||| ||||| | |||| | | | ||||||||| ||||| |
Sbjct 1486 GTTGCTGGGAT-TTGGCGTTTACTGGTGCATTCTGTGC-GACCATTCACTTGATAGAGAT 1543
Query 1494 CAAAAGTCACGCGGGATACGTAAAGGAGATTGCATATAAGATGATTGATTCAGTGAGAGA 1553
| |||||| || | || ||| |||||||||||| |||||||||| ||||| || |||||
Sbjct 1544 CCCAAGTCAAGCTGAATCCGTTAAGGAGATTGCAAATAAGATGATAGATTCTGTTAGAGA 1603
Query 1554 GCTTGTGGAAAGAGGAATGGAAGTTGGACTTGTGACGAGAGCTTTCAGAGATCTTGAAAG 1613
||||||||||||||||||||||||||| ||||| | ||||||||| ||||||||||||||
Sbjct 1604 GCTTGTGGAAAGAGGAATGGAAGTTGGGCTTGTTAGGAGAGCTTTTAGAGATCTTGAAAG 1663
Query 1614 TATTGTCAAAAAACAA-TGGGTCTGGTACATG-A-CTTGTGAATACAGATTCCTTAAGGG 1670
|| ||||| |||||| ||| ||||| || | | ||||||| |||| |||||||
Sbjct 1664 CATAGTCAAGAAACAAATGGAA-TGGTA--TGGAACGAACGAATACAAATTCGTTAAGGG 1720
Query 1671 TTTGCTTTGGAGGCTCTACGCGATCAATGGCATGAAAAGGGAAAGTAAGTAT-GTGTTGT 1729
| ||||||||| ||||| || ||||| ||||||||| ||||||||||| || |||||||
Sbjct 1721 TCTGCTTTGGAAACTCTATGCAATCAAAGGCATGAAATGGGAAAGTAAG-ATCGTGTTGT 1779
Query 1730 GGAGAATCAATGTTGATAT-TG-AGAGGTCAGTGGATGAAAATCTTAAAGTGCTCCCAAA 1787
|||||||||| || ||| | || | || ||| ||| | ||||| ||| |||||
Sbjct 1780 GGAGAATCAACGT-GAT-TGTGGATAGAAGAGTTAATGTGGAGGTTAAAAAGCTTCCAAA 1837
Query 1788 GAGTGAA-TTTGATTGGCTTAACCAACCT 1815
| || || ||||||||||| |||| ||||
Sbjct 1838 GGGT-AAGTTTGATTGGCTGAACCTACCT 1865
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 68486260510
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5