BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G37900.1
Length=726
Score E
Sequences producing significant alignments: (Bits) Value
Ahg494184 jgi|Araly1|494184|fgenesh2_kg.7__3617__AT5G37910.1 521 2e-147
Ahg947469 jgi|Araly1|947469|scaffold_703698.1 348 4e-95
Ahg947470 jgi|Araly1|947470|scaffold_703699.1 311 5e-84
Ahg948102 jgi|Araly1|948102|scaffold_704331.1 281 4e-75
Ahg947471 jgi|Araly1|947471|scaffold_703700.1 272 2e-72
Ahg947466 jgi|Araly1|947466|scaffold_703695.1 259 2e-68
Ahg947468 jgi|Araly1|947468|scaffold_703697.1 180 1e-44
> Ahg494184 jgi|Araly1|494184|fgenesh2_kg.7__3617__AT5G37910.1
Length=813
Score = 521 bits (282), Expect = 2e-147
Identities = 493/591 (83%), Gaps = 29/591 (5%)
Strand=Plus/Plus
Query 146 CAATGGAGAATATTCTTGAATCGATATTGGTCACATGCCCAAACGACATGTTTGGTTGCA 205
||||||||| |||||||||||||| |||||| ||||||||||||| |||||||||||||
Sbjct 242 CAATGGAGAGTATTCTTGAATCGACCTTGGTCCCATGCCCAAACGAAATGTTTGGTTGCA 301
Query 206 CCGAGAGTTTCTTATATGGGAAAAAATCAACTCATGAAGAAGAATGCATTTTCTCTCTAT 265
|| ||| || ||| ||||| ||| ||||| |||||||| |||||||||| ||||||| ||
Sbjct 302 CCAAGACTTGCTTTTATGGTAAAGAATCAGCTCATGAAAAAGAATGCATCTTCTCTCAAT 361
Query 266 GCTCATGCCCTTCATTG-GACTGTGAGTACTCCGGC-CGATACGAGGATCTCTATGATCA 323
|||||||||||||| | || || || ||| | ||| | |||| |||||||||| | |||
Sbjct 362 GCTCATGCCCTTCA-CGAGAATGCGATTACACTGGCTC-ATACAAGGATCTCTACGCTCA 419
Query 324 CTATAAACTGACTCACATCTCGAACTCATACTGGACCACTAACTGCTTTAGATCTAGCAT 383
||||||||||||| || |||||| | | |||| | | | ||| || | ||||
Sbjct 420 CTATAAACTGACT--CA-CTCGAAATTTTCCTGG---AGT-A-----TTAAATGTGGCAT 467
Query 384 TCCATATAAGGCCCCGATGCTT-ATCAGCGATAAGATACAAATTACAAGGGTATATGAGA 442
||| |||| |||| |||| || |||||| ||||||||| ||||| ||||||| |||||
Sbjct 468 TCCTTATACGGCCGTGATG-TTCATCAGCAATAAGATACTAATTAAAAGGGTACATGAG- 525
Query 443 AG-AAAATATTGTTTGCAGTGCAGTGTTTTAGGGAGTCGTGTGGTGTGTATGTAACCGTA 501
|| ||| ||||||||||||| ||||||||||| || |||||||||||||||||||||||
Sbjct 526 AGTAAACTATTGTTTGCAGTACAGTGTTTTAGAGAACCGTGTGGTGTGTATGTAACCGTA 585
Query 502 AGCTGCATTGCACCATCTGCTCCAGAAGTTGGACAGTTCTCATATCAAATCTCCTACACT 561
||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||
Sbjct 586 AGCTGCATTGCACCATCTGCTCCTGAAGTAGGACAGTTCTCATATCGTCTCTCCTACACT 645
Query 562 GTGGATGAACACACTATGGTTTACAGA-TCACCACAAATGAAGAGGGTTCGTAAAGTGAG 620
||||| ||| ||| || |||| || ||||| | |||||| |||||||||||||||
Sbjct 646 AAGGATGGACAAACTGTGATTTAT-GAATCACCGGAGGTGAAGAAGGTTCGTAAAGTGAG 704
Query 621 TTTTGAAACACCTCAAGAGAATTTCATGTTGATACCTCACAA-TT-T-ATTGCGTAGTGA 677
||||||||| ||||||||||||||||||||||| |||||||| || | |||||||||||
Sbjct 705 TTTTGAAACCCCTCAAGAGAATTTCATGTTGATCCCTCACAACTTATTATTGCGTAGTGG 764
Query 678 ATTGTTGGAT-ATTAAGCTTTCTATCGTCGA-AACGTCGAACCAAGAGTAA 726
|||||| || ||| |||||| ||||||||| || || |||||||||||||
Sbjct 765 CTTGTTG-ATGATTGAGCTTTGTATCGTCGACAA-GTTGAACCAAGAGTAA 813
Score = 183 bits (99), Expect = 1e-45
Identities = 129/144 (90%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 1 ATGGTGGGAGCCTTAGAAGCTTTGATATCTCAAGGTCATGGAGGGGAGAGAGTGGCTAAG 60
||||||||||||| ||||||||| ||| ||| ||| || |||||||||||||||||||
Sbjct 1 ATGGTGGGAGCCTCGGAAGCTTTGTTATTTCACGGTGGTGAAGGGGAGAGAGTGGCTAAG 60
Query 61 AGACAACGCTCGGCGACATTGCTAGATCTTGATATCCTCGATTGTCCTATTTGCTGTGAA 120
||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct 61 AGACACCGCTCGGCGACACTGCTAGATCTTGATATCCTCGATTGTCCTGTTTGCTGTGAA 120
Query 121 GGATTGACGTGTCCTATCTTCCAG 144
| |||| || |||||||||||||
Sbjct 121 GCATTGGCGACTCCTATCTTCCAG 144
> Ahg947469 jgi|Araly1|947469|scaffold_703698.1
Length=781
Score = 348 bits (188), Expect = 4e-95
Identities = 439/556 (79%), Gaps = 34/556 (6%)
Strand=Plus/Plus
Query 146 CAATGGAGAATATTCTTGAATCGATATTGGTCACATGCCCAAACGACATGTTTGGTTGCA 205
||||||||| | ||||||||||||| ||| || |||| || |||| || |||||| ||||
Sbjct 187 CAATGGAGAGTGTTCTTGAATCGATCTTGATCCCATGTCCGAACGCCAAGTTTGGATGCA 246
Query 206 CCGAG-A-GTTTCTTATATGGGAAAAAATCAACTCATGAAGAAGAATGCATTTTCTCTCT 263
| || | || || | ||||||||| |||||||||||||| |||||||||| |||||||
Sbjct 247 CAAAGAAGGTATC-T-TATGGGAAAGAATCAACTCATGAAAAAGAATGCATCTTCTCTCA 304
Query 264 ATGCTCATGCCCT-TCATTGGACTGTGAGTACTCCGGC-CGATACGAGGATCTCTATGA- 320
||||||||||||| | | |||||| | ||| | || | |||| |||||||||| |
Sbjct 305 ATGCTCATGCCCTGT-AGAGGACTGCAATTACACTAGCTC-ATACAAGGATCTCTA-CAC 361
Query 321 TCACTAT-AAACTGACTCACATCTCG-AACTCATA-CTGGACCACTAACTGC-TTTAGAT 376
||||||| | | || | ||| | | || | ||| | | || ||| | | ||| | |
Sbjct 362 TCACTATCGTA-TTAC-C-CATAT-GAAAGT-ATACCAGCTTCA-TAAGTTCATTT-G-T 413
Query 377 CTAGCATTCCATATAAGGCCCCGATG--C-TTATCAGCGAT---AAGATACAAATTACAA 430
| |||||| | || | | |||| | | | ||||||| |||||| ||||| ||
Sbjct 414 -GA-CATTCCCTCTATTGTCAAGATGAACATCAGCAGCGATAAGAAGATATTAATTAGAA 471
Query 431 GGGTATATGA-GAAGAAAATATTGTTTGCAGTGCAGTGTTTTAGGGAGTCGTGTGGTGTG 489
|| ||| | ||||| ||| |||||||||||||||||||||||||| | |||||||||
Sbjct 472 TGGAATA-CATGAAGAGAATCTTGTTTGCAGTGCAGTGTTTTAGGGACCCATGTGGTGTG 530
Query 490 TATGTAACCGTAAGCTGCATTGCACCATCTGCTCCAGAAGTTGGACAGTTCTCATATCAA 549
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 531 TATGTAACCGTAAGCTGCATTGCACCATCTGCTCCAGAAGTAGGACAGTTCTCATATCGT 590
Query 550 ATCTCCTACACTGTGGATGAACACACTATGGTTTACAGATCACCACAAATGAAGAGGGTT 609
||||||| || ||||||| ||||||||| |||||| |||||| | ||||||| |||
Sbjct 591 CTCTCCTATACCGTGGATGGGCACACTATGATTTACAAATCACCGGATGTGAAGAGAGTT 650
Query 610 C-GTAAAGTGAGTTTTGAAACACCTCAAGAGAATTTCATGTTGATACCTCACAATTTATT 668
| | ||| ||| |||| |||| ||||||||||||||||||||||| ||| ||| ||||||
Sbjct 651 CTG-AAATTGAATTTTCAAACCCCTCAAGAGAATTTCATGTTGATCCCTAACAGTTTATT 709
Query 669 GCGTAGTGAATTGTTG 684
|||| ||||| |||||
Sbjct 710 GCGTGGTGAAATGTTG 725
> Ahg947470 jgi|Araly1|947470|scaffold_703699.1
Length=907
Score = 311 bits (168), Expect = 5e-84
Identities = 443/570 (78%), Gaps = 42/570 (7%)
Strand=Plus/Plus
Query 146 CAATGGAGAATATTCTTGAATCGATATTGGTCACATGCCCAAACGAC-ATGTTTGGTTGC 204
||||||||| | ||||||||||||| |||||| |||| ||||||| | | ||| ||||||
Sbjct 314 CAATGGAGAGTGTTCTTGAATCGATCTTGGTCCCATGTCCAAACG-CTAAGTTAGGTTGC 372
Query 205 ACCGAG-AGTTTCT-TATATGGGAAAAAATCAACTCATGAAGAA-GAATGCATTTTCTCT 261
|| || || |||| | ||||||||| |||||||||||||| || |||||||| ||||||
Sbjct 373 ACAAAGAAG-TTCTCT-TATGGGAAAGAATCAACTCATGAA-AAGGAATGCATGTTCTCT 429
Query 262 CTATGCTCATGCCCTTCATTGGACTGTGAGTACT-CCGGC-CGATACGAGGATCTCTA-T 318
| |||||| |||||| ||||||| || | || | | || | |||| ||||||||||
Sbjct 430 CAATGCTCCTGCCCTGCATTGGATTGCAATTA-TACTTGCTC-ATACAAGGATCTCTACC 487
Query 319 GATCACTAT-AAACTGACTCACATCTCGAACTCATACTGGA-C-CACTAACTGCTT-TAG 374
| ||||||| | ||| || ||| | | || | ||| | | | | ||| | || | |
Sbjct 488 G-TCACTATCATACT-ACCCAC-T-TGGAGGT-ATA-T-CATCTTAATAA--G-TTCT-G 536
Query 375 ATCTAGCA-TTCCATATAAG-GCCCCGATGCTTATCAGCGATAAGATACAAATTACA-AG 431
| | ||| || | | | || || ||| |||||||| ||||| ||||| | |
Sbjct 537 TTGTGGCAGTTTC-T-TTAGTATCCGGATAAACATCAGCGAGAAGATGTTAATTAGACTG 594
Query 432 G-GTATATGAGAAGAAAATATTGTTTGCAGTGCAGTGTTT-TAGGGAGTCGTGTGGTGTG 489
| ||| | | ||| | |||||||| ||||||||||| | ||| ||| ||||||
Sbjct 595 GAGTACA-CA-AAGGCTCTTTTGTTTGCGGTGCAGTGTTTCCA-GGAACCGTACGGTGTG 651
Query 490 TATGTAACCGTAAGCTGCATTGCACCATCTGCTCCAGAAGTTGGACAGTTCTCATATCAA 549
|||||||| |||||||||||||||||||||||||||||||| ||| | ||||||||| |
Sbjct 652 TATGTAACTGTAAGCTGCATTGCACCATCTGCTCCAGAAGTAGGAAATTTCTCATATGAT 711
Query 550 ATCTCCTACACTGTGGATGAACACACTATGGTTTACAGATCACCACAA-ATGAAGAGGGT 608
|||||||||||||||||| ||| |||||| ||||| ||| ||| || ||||||| | |
Sbjct 712 CTCTCCTACACTGTGGATGGACAAACTATGACTTACAAATCGCCA-AAGATGAAGATGAT 770
Query 609 TCGTAAAGTGAGTTTTGAAACACCTCAAGAGAATTTCATGTTGATACCTCACAATTTATT 668
|| | ||||||||||| |||| ||||||||||||||||||||||| ||| ||||||||||
Sbjct 771 TCTTGAAGTGAGTTTTCAAACTCCTCAAGAGAATTTCATGTTGATCCCTAACAATTTATT 830
Query 669 GCGTAGTGA-ATTGTTGGATATTAAGCTTT 697
|||| |||| || |||||| || |||||||
Sbjct 831 GCGTGGTGACAT-GTTGGACATGAAGCTTT 859
> Ahg948102 jgi|Araly1|948102|scaffold_704331.1
Length=631
Score = 281 bits (152), Expect = 4e-75
Identities = 421/545 (77%), Gaps = 41/545 (8%)
Strand=Plus/Plus
Query 146 CAATGGAGAATATTCTTGAATCGATATTGGTCACATGCCCAAACGACATGTTTGGTTGCA 205
||||| ||| | ||||||||||||| |||||| |||||||||||| || |||||||||||
Sbjct 22 CAATGCAGAGTGTTCTTGAATCGATCTTGGTCCCATGCCCAAACGTCACGTTTGGTTGCA 81
Query 206 CCGAGAGTTTCT-TATATGGGAAAAAATCAACTCATGAAG-AAGAATGCATTTTCTCTCT 263
| ||| || || | ||||||||| | | |||||||| || ||||||||| || |||
Sbjct 82 CAAAGAATTCCTCT-TATGGGAAAGAGTTAACTCATG-AGAAAGAATGCAACGTCGCTCC 139
Query 264 ATGCTCATGCCCTTCATTG--GACTGTGAGTACT-CCGGC-CGATACGAGGATCTCTATG 319
||| || ||||| | | | ||||| || || | ||| | |||| |||||||||| |
Sbjct 140 ATGTTCCTGCCC-T-GTGGAAGACTGCGATTA-TATTGGCTC-ATACAAGGATCTCTACG 195
Query 320 ATCACTATAAACTGACTCACATCTCGAACTCATACTGGACCAC-TAACTGCTTTAGATCT 378
|||||||| | || ||||| || | ||| | | | | ||| | | | ||| || | |
Sbjct 196 ATCACTATGATCTAACTCA-AT-T-GAA--AAGA-TTCA-CACTTGATTACTTCAGTTGT 248
Query 379 AGC-ATTCCATATAAGGC-CCCGATGCTTATCAGCGAT---AAGATACAAATTACAAGGG 433
|| ||||| | ||| | ||||||| ||||||||| |||||| ||||| || ||
Sbjct 249 GGCAATTCC-TTTAA-TCTCCCGATGAAAATCAGCGATAAGAAGATAGTAATTAGAATGG 306
Query 434 TATATGA-GAAGAAAATATTGTTTGCAGTGCAGTGTTTTAGGGAGTCGTGTGGTGTGTAT 492
| | | ||||| | | |||||||||||||||||||||| |||| | ||||||||||||
Sbjct 307 AAGA-CACGAAGAGACTCTTGTTTGCAGTGCAGTGTTTTAAGGAGCCTTGTGGTGTGTAT 365
Query 493 GTAACCGTAAGCTGCATTGCACCATCTGCTCCAGAAGTTGGA-CAGTTCTCATATCAAAT 551
||||||||||||||||||||||||| | ||| |||||| ||| | |||||||||| | |
Sbjct 366 GTAACCGTAAGCTGCATTGCACCATTTACTCGAGAAGTAGGAGC-GTTCTCATATTATTT 424
Query 552 CTCCTACACTGTGGATG-AACACACTATG-GTTTACAG-ATCACCACAAATGAAGAGGGT 608
|||||| ||||||||| || || |||| ||| || | |||| || | |||||||||||
Sbjct 425 CTCCTATGCTGTGGATGGAA-ACGTTATGAGTT-AC-GTATCAACAGAGATGAAGAGGGT 481
Query 609 TCGTAAAGTGAGTTTTGAAA-CACCTCAAGA-GAATTTCATGTTGATACCTCACAATTTA 666
|| | ||||||||| | || | ||| |||| ||||||||||| |||||||||| ||||
Sbjct 482 TCTTGAAGTGAGTTCTCAAGTC-CCT-AAGAAGAATTTCATGTGGATACCTCACTGTTTA 539
Query 667 TTGCG 671
|||||
Sbjct 540 TTGCG 544
> Ahg947471 jgi|Araly1|947471|scaffold_703700.1
Length=851
Score = 272 bits (147), Expect = 2e-72
Identities = 398/514 (77%), Gaps = 38/514 (7%)
Strand=Plus/Plus
Query 146 CAATGGAGAATATTCTTGAATCGATATTGGTCACATGCCCAAACGACATGTTTGGTTGCA 205
||||||||| | |||||||||| || || || |||||||||||| || ||||| ||||
Sbjct 271 CAATGGAGAGTGTTCTTGAATCAATCTTTATCCCATGCCCAAACGCCAACTTTGGATGCA 330
Query 206 CCGAGAGT-T-TCTTATATGGGAAAAAATCAACTCATGAAGAA-GAATGCATTTTCTCTC 262
|| | ||| | || | ||||||||| |||||||||||||| || |||||||| |||||||
Sbjct 331 CCAAAAGTATATC-T-TATGGGAAAGAATCAACTCATGAA-AAGGAATGCATCTTCTCTC 387
Query 263 TATGCTCA-TGCCCTTCATTGGACTGTGAGTACTCCGGC-CGATACGAGGATCTCTATGA 320
||||| | |||||| ||||| | || | ||| | || | |||| |||||||||| |
Sbjct 388 AATGCT-ATTGCCCTGCATTGAATTGCAATTACACTAGCTC-ATACAAGGATCTCTA-CA 444
Query 321 -TCACTAT-AAACTGACTCACATCTCGAACTCATACTGGAC-CACTAACTGC-TTTAGAT 376
||||||| || || |||| | ||| | | || | | | ||| | | ||| | |
Sbjct 445 CTCACTATCGTAC-AACCCACA--TGGAAGT-AGACCAG-CTTAATAAGTACATTT-G-T 497
Query 377 CTAGCATTCCATATAAG-GCCCCGATG--C-TTATCAGCGATAAG-ATA-CA-AATTACA 429
| |||||| | | || | || |||| | | |||||||||| ||| | ||||| |
Sbjct 498 -GA-CATTCCCT-TTAGTGTCCGGATGAACATCGGCAGCGATAAGAATATAATAATTAGA 554
Query 430 AGGGTATATGA-GAAGAAAATATTGTTTGCAGTGCAGTGTTTTAGGGAGTCGTGTGGTGT 488
| || ||| | |||| | | |||||||||||||| |||||||||||| ||||||||||
Sbjct 555 AAGGAATA-CACAAAGAGACTCTTGTTTGCAGTGCAATGTTTTAGGGAGCCGTGTGGTGT 613
Query 489 GTATGTAACCGTAAGCTGCATTGCACCATCTGCTCCAGAAGTTGGACAGTTCTCATATCA 548
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 614 GTATGTAACCGTAAGCTGCATTGCACCATCTGCTCCTGAAGTAGGACAGTTCTCATATCA 673
Query 549 AATCTCCTACACTGTGGATGAACACACTATGGTTTACAGA-TCACCACAAA-TGAAGAGG 606
|||||||||||||||||| ||||||||| ||| || ||||| | | |||||||
Sbjct 674 TCTCTCCTACACTGTGGATGGACACACTATAACTTAT-GAATCACC-CGAGGTGAAGAGA 731
Query 607 GTTCGTAAAGTGAGTTTTGAAACACCTCAAGAGA 640
||| ||||||||| | ||| |||||||||||
Sbjct 732 ATTCTTAAAGTGAGCTCCCAAAGACCTCAAGAGA 765
> Ahg947466 jgi|Araly1|947466|scaffold_703695.1
Length=430
Score = 259 bits (140), Expect = 2e-68
Identities = 215/252 (85%), Gaps = 2/252 (1%)
Strand=Plus/Plus
Query 452 TGTTTGCAGTGCAGTGTTTTAGGGAGTCGTGTGGTGTGTATGTAACCGTAAGCTGCATTG 511
|||||||||||||||||||||||||| | |||||||||||| | ||||||||||||||||
Sbjct 139 TGTTTGCAGTGCAGTGTTTTAGGGAGCCATGTGGTGTGTATTTTACCGTAAGCTGCATTG 198
Query 512 CACCATCTGCTCCAGAAGTTG-GACAGTTCTCATATCAAATCTCCTACACTGTGGATGAA 570
||||||||||||||| | || ||||||||||||| || ||||||||||||||||||
Sbjct 199 CACCATCTGCTCCAGGA-TTAAGACAGTTCTCATACCATCTCTCCTACACTGTGGATGGG 257
Query 571 CACACTATGGTTTACAGATCACCACAAATGAAGAGGGTTCGTAAAGTGAGTTTTGAAACA 630
||||||||| |||||| ||||||| | | ||||| |||| ||||||||| | ||| |
Sbjct 258 CACACTATGATTTACAAATCACCAGAGGTTAAGAGAGTTCTTAAAGTGAGCTCCCAAAGA 317
Query 631 CCTCAAGAGAATTTCATGTTGATACCTCACAATTTATTGCGTAGTGAATTGTTGGATATT 690
||| |||||| |||||||||||| ||| ||| |||||||| | ||||| ||||||| ||
Sbjct 318 CCTGAAGAGAGTTTCATGTTGATCCCTAACAGTTTATTGCATGGTGAAATGTTGGAGATC 377
Query 691 AAGCTTTCTATC 702
||||||| ||||
Sbjct 378 AAGCTTTTTATC 389
> Ahg947468 jgi|Araly1|947468|scaffold_703697.1
Length=727
Score = 180 bits (97), Expect = 1e-44
Identities = 199/246 (81%), Gaps = 15/246 (6%)
Strand=Plus/Plus
Query 461 TGCAGTGTTTTAG-GGAGTCGTGTGGTGTGTATGTAACCGTAAGCTGCATTGCACCATCT 519
|||| || ||| | |||| | | |||||| |||||||| |||||||||||||||||||||
Sbjct 442 TGCAATG-TTTCGAGGAGCCATTTGGTGTTTATGTAACTGTAAGCTGCATTGCACCATCT 500
Query 520 GCTCCAGAAGTTGGACAGTTCTCATATCAAATCTCCTACACTG-TG-G-ATGAACACACT 576
||||||||||| ||| ||||||||||||| ||||||||||| || | |||||||||||
Sbjct 501 GCTCCAGAAGTAGGAGAGTTCTCATATCATCTCTCCTACACTACTGAGGATGAACACACT 560
Query 577 ATGGTTTAC-AGATCACCACAAA-TGAAGAGGGTTCGTAAAGTGAGTTTTGAAACACCTC 634
||| |||| | ||||||| || |||| | ||||| ||||||||| | ||| ||||
Sbjct 561 ATGACTTACCA-ATCACCA-AAGGTGAAAAAGGTTCTTAAAGTGAGCTCCCAAAGACCTA 618
Query 635 AAGAGAATTTCATGTTGATACCTCACAATTT-ATTGCGT-AGTGAATTGTTGGAT-ATTA 691
|||||| || ||| ||||| ||||||||||| || ||| | | ||||||| || || |
Sbjct 619 AAGAGAGTTCCATATTGATCCCTCACAATTTGATA-CGTTA-TCAATTGTTA-ATTATGA 675
Query 692 AGCTTT 697
||||||
Sbjct 676 AGCTTT 681
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 26724164817
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5