BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G37910.1
Length=831
Score E
Sequences producing significant alignments: (Bits) Value
Ahg494184 jgi|Araly1|494184|fgenesh2_kg.7__3617__AT5G37910.1 893 0.0
Ahg947470 jgi|Araly1|947470|scaffold_703699.1 568 3e-161
Ahg947469 jgi|Araly1|947469|scaffold_703698.1 545 1e-154
Ahg947471 jgi|Araly1|947471|scaffold_703700.1 508 2e-143
Ahg948107 jgi|Araly1|948107|scaffold_704336.1 448 4e-125
Ahg947533 jgi|Araly1|947533|scaffold_703762.1 169 4e-41
Ahg947468 jgi|Araly1|947468|scaffold_703697.1 165 5e-40
> Ahg494184 jgi|Araly1|494184|fgenesh2_kg.7__3617__AT5G37910.1
Length=813
Score = 893 bits (483), Expect = 0.0
Identities = 717/825 (87%), Gaps = 36/825 (4%)
Strand=Plus/Plus
Query 19 TCGGAAGCTTTGATATCTCAAGGTGATGGAGGGGAGAGAGTGGCTAAGAGACAACGCTCG 78
|||||||||||| ||| ||| |||| || |||||||||||||||||||||||| ||||||
Sbjct 13 TCGGAAGCTTTGTTATTTCACGGTGGTGAAGGGGAGAGAGTGGCTAAGAGACACCGCTCG 72
Query 79 GCGATAGTACTGCTAGATCTTGATATCCTCGATTGTCCTATTTGCTGTGAAGCATTGACG 138
||| | ||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct 73 GCG--A-CACTGCTAGATCTTGATATCCTCGATTGTCCTGTTTGCTGTGAAGCATTGGCG 129
Query 139 AGTCCTATCTTCCAGTGTGATAATGGGCATTTGGCTTGCGGTTCTTGCTGTCCCAAACTG 198
| |||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||
Sbjct 130 ACTCCTATCTTCCAGTGTGATAATGGACATTTAGCTTGCTCTTCTTGCTGTCCCAAACTG 189
Query 199 AGTAATAAGTGCCCTGCATGTACTTTGCCTGTTGGTCACAGTCGCA-GCAGAGCAATGGA 257
|| || ||||||||| ||||| |||| |||||||| |||| ||| | | |||||||||||
Sbjct 190 AGGAACAAGTGCCCTTCATGTGCTTTCCCTGTTGGCCACAATCG-ATGTAGAGCAATGGA 248
Query 258 GAGTGTTCTTGAATCTATTTTGATCCCATGCCCAAACGTCAGGTTTGGTTGTACCAAGAG 317
|||| |||||||||| | ||| ||||||||||||||| | ||||||||| |||||||
Sbjct 249 GAGTATTCTTGAATCGACCTTGGTCCCATGCCCAAACGAAATGTTTGGTTGCACCAAGAC 308
Query 318 TTTCTTTTATGGGAAAGAGTCAGCTCATGAAAAAGAATGCATCTTCTCTCAATGCTCATG 377
|| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 309 TTGCTTTTATGGTAAAGAATCAGCTCATGAAAAAGAATGCATCTTCTCTCAATGCTCATG 368
Query 378 CCCTTCATCG-GTCTGCGATTACACTGGCTCATACAAGGATCTCTACGCTCACTATAAAC 436
||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 369 CCCTTCA-CGAGAATGCGATTACACTGGCTCATACAAGGATCTCTACGCTCACTATAAAC 427
Query 437 TGACTCACTCCACGAATATTTTC-TGGAATATTAAGCGCTTTAGATGTGCCAATTTCTT- 494
|||||||||| ||| |||||| |||| |||||| | | || || | || |||
Sbjct 428 TGACTCACTC---GAA-ATTTTCCTGGAGTATTAAA---T---G-TG-GC-A-TTCCTTA 473
Query 495 TACGACC-TCCATGCTCATCAGCGATAAGATACTAATTAAAAGGGTACATGAGAAG-AAA 552
|||| || | ||| |||||||| |||||||||||||||||||||||||||||| | |||
Sbjct 474 TACGGCCGTG-ATGTTCATCAGCAATAAGATACTAATTAAAAGGGTACATGAGA-GTAAA 531
Query 553 CTATTGCTTGCAGTGCAGTGTTTTAGGGAACCGTGTGGTGTGTATGTGACTGTAAGCTTC 612
|||||| ||||||| ||||||||||| |||||||||||||||||||| || ||||||| |
Sbjct 532 CTATTGTTTGCAGTACAGTGTTTTAGAGAACCGTGTGGTGTGTATGTAACCGTAAGCTGC 591
Query 613 ATTGCACCATCTGCTCCAGAAGTAGGAGAGTTCTCATATCAACTCTCCTACAATGTGGAT 672
||||||||||||||||| ||||||||| |||||||||||| |||||||||| | ||||
Sbjct 592 ATTGCACCATCTGCTCCTGAAGTAGGACAGTTCTCATATCGTCTCTCCTACACTAAGGAT 651
Query 673 GGACACACTGTGACTTATGAATCTCCGGAGGTGAAGAGGGTTTGTAAAGTGAGTATTGAA 732
||||| ||||||| ||||||||| ||||||||||||| |||| ||||||||||| |||||
Sbjct 652 GGACAAACTGTGATTTATGAATCACCGGAGGTGAAGAAGGTTCGTAAAGTGAGTTTTGAA 711
Query 733 ACCCCTCAAGAGAATTTCATGTTGATACCTCACAG-TT-T-ATTGCGTGGTGACTTGTTG 789
|||||||||||||||||||||||||| ||||||| || | ||||||| ||| |||||||
Sbjct 712 ACCCCTCAAGAGAATTTCATGTTGATCCCTCACAACTTATTATTGCGTAGTGGCTTGTTG 771
Query 790 GA-GAT-GCAGGTTTTTATCATCGAAAATGTGGA-CCAAGAGTAA 831
| ||| | || ||| |||| |||| || || || ||||||||||
Sbjct 772 -ATGATTG-AGCTTTGTATCGTCGACAA-GTTGAACCAAGAGTAA 813
> Ahg947470 jgi|Araly1|947470|scaffold_703699.1
Length=907
Score = 568 bits (307), Expect = 3e-161
Identities = 585/716 (82%), Gaps = 32/716 (4%)
Strand=Plus/Plus
Query 106 CTCGATTGTCCTATTTGCTGTGAAGCATTGACGAGTCCTATCTTCCAGTGTGATAATGGG 165
||||||||||||||||||| ||||| || || | ||||||||||||||||||||||||
Sbjct 169 CTCGATTGTCCTATTTGCTACGAAGCTTTCACAATTCCTATCTTCCAGTGTGATAATGGA 228
Query 166 CATTTGGCTTGCGGTTCTTGCTGTCCCAAACTGAGTAATAAGTGCCCTGCATGTACTTTG 225
||| ||||||| |||||||||||||||||||| |||||| |||||||| ||| ||| |
Sbjct 229 CATCTGGCTTGTTCTTCTTGCTGTCCCAAACTGAATAATAAATGCCCTGCTTGTGCTTCG 288
Query 226 CCTGTTGGTCACAGTCGCAGCAGAGCAATGGAGAGTGTTCTTGAATCTATTTTGATCCCA 285
|||||||| |||| |||| |||||||||||||||||||||||||||| || ||| |||||
Sbjct 289 CCTGTTGGCCACAATCGCTGCAGAGCAATGGAGAGTGTTCTTGAATCGATCTTGGTCCCA 348
Query 286 TGCCCAAACG-TCAGGTTTGGTTGTACCAAGA-GTTTCTTTTATGGGAAAGAGTCAGCTC 343
|| ||||||| | || || ||||| || |||| ||| || |||||||||||| ||| |||
Sbjct 349 TGTCCAAACGCTAAG-TTAGGTTGCACAAAGAAGTT-CTCTTATGGGAAAGAATCAACTC 406
Query 344 ATGAAAAAGAATGCATCTTCTCTCAATGCTCATGCCCTTCATCGG-TCTGCGATTACACT 402
||||||| |||||||| |||||||||||||| |||||| ||| || | ||| |||| |||
Sbjct 407 ATGAAAAGGAATGCATGTTCTCTCAATGCTCCTGCCCTGCATTGGAT-TGCAATTATACT 465
Query 403 GGCTCATACAAGGATCTCTAC-GCTCACTATAA-ACTGACTCACTCC-ACGAATATTTTC 459
|||||||||||||||||||| | ||||||| | ||| || |||| | | |||| ||
Sbjct 466 TGCTCATACAAGGATCTCTACCG-TCACTATCATACT-ACCCACTTGGAGGTATATCATC 523
Query 460 TGGAATATTAAGCGCT-TTAGATGTGCCAATTTCTTTACG-A-CCTCCATGCTCATCAGC 516
| |||| | | || || | || || | |||||||| | | || || |||||||
Sbjct 524 TT-AATA--A-GTTCTGTT-G-TG-GC-AGTTTCTTTA-GTATCCGG-ATAAACATCAGC 573
Query 517 GATAAGATACTAATTAAAA-GG-GTACATGAGAAGAAACTATTGCTTGCAGTGCAGTGTT 574
|| ||||| |||||| | || ||||| | ||| || ||| |||| ||||||||||
Sbjct 574 GAGAAGATGTTAATTAGACTGGAGTACAC-A-AAGGCTCTTTTGTTTGCGGTGCAGTGTT 631
Query 575 TT-AGGGAACCGTGTGGTGTGTATGTGACTGTAAGCTTCATTGCACCATCTGCTCCAGAA 633
| ||| |||||| ||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct 632 TCCAGG-AACCGTACGGTGTGTATGTAACTGTAAGCTGCATTGCACCATCTGCTCCAGAA 690
Query 634 GTAGGAGAGTTCTCATATCAACTCTCCTACAATGTGGATGGACACACTGTGACTTATGAA 693
|||||| | ||||||||| | |||||||||| |||||||||||| ||| ||||||| ||
Sbjct 691 GTAGGAAATTTCTCATATGATCTCTCCTACACTGTGGATGGACAAACTATGACTTACAAA 750
Query 694 TCTCCGGAGGTGAAGAGGGTT-TGTAAAGTGAGTATTGAAACCCCTCAAGAGAATTTCAT 752
|| || || |||||| | || | | |||||||| || |||| |||||||||||||||||
Sbjct 751 TCGCCAAAGATGAAGATGATTCT-TGAAGTGAGTTTTCAAACTCCTCAAGAGAATTTCAT 809
Query 753 GTTGATACCTCACAGTTTATTGCGTGGTGACTTGTTGGAGATGCAGGTTTTTATCA 808
|||||| ||| ||| |||||||||||||||| ||||||| ||| || |||| ||||
Sbjct 810 GTTGATCCCTAACAATTTATTGCGTGGTGACATGTTGGACATGAAGCTTTTAATCA 865
> Ahg947469 jgi|Araly1|947469|scaffold_703698.1
Length=781
Score = 545 bits (295), Expect = 1e-154
Identities = 603/747 (81%), Gaps = 40/747 (5%)
Strand=Plus/Plus
Query 67 AGACAACGCTCGGCGATAGTACTGCTAGATCTTGATATCCTCGATTGTCCTATTTGCTGT 126
||| |||||||| |||| | || | ||||| || || ||||||||||| |||||||
Sbjct 7 AGA-AACGCTCGACGAT-G--CTAATGGATCTGGAGATTCTCGATTGTCCCATTTGCTAC 62
Query 127 GAAGCATTGACGAGTCCTATCTTCCAGTGTGATAATGGGCATTTGGCTTGCGGTTCTTGC 186
||||| || || | |||||||||||||||||||||||| ||||||||||| |||||||
Sbjct 63 GAAGCTTTCACAATTCCTATCTTCCAGTGTGATAATGGACATTTGGCTTGTTCTTCTTGC 122
Query 187 TGTCCCAAACTGAGTAATAAGTGCCCTGCATGTACTTTGCCTGTTGGTCACAGTCGCAGC 246
||||||| ||||||||||| |||||| ||||| || ||||| |||| || | ||| ||
Sbjct 123 TGTCCCACCCTGAGTAATAAATGCCCTACATGTGCTCTGCCTATTGGCCATAATCGTTGC 182
Query 247 AGAGCAATGGAGAGTGTTCTTGAATCTATTTTGATCCCATGCCCAAACGTCAGGTTTGGT 306
|||||||||||||||||||||||||| || ||||||||||| || |||| || ||||||
Sbjct 183 AGAGCAATGGAGAGTGTTCTTGAATCGATCTTGATCCCATGTCCGAACGCCAAGTTTGGA 242
Query 307 TGTACCAAG-A-GTTTCTTTTATGGGAAAGAGTCAGCTCATGAAAAAGAATGCATCTTCT 364
|| || ||| | || || |||||||||||| ||| ||||||||||||||||||||||||
Sbjct 243 TGCACAAAGAAGGTATC--TTATGGGAAAGAATCAACTCATGAAAAAGAATGCATCTTCT 300
Query 365 CTCAATGCTCATGCCCT-TCATCGGTCTGCGATTACACTGGCTCATACAAGGATCTCTAC 423
||||||||||||||||| | | || |||| |||||||| ||||||||||||||||||||
Sbjct 301 CTCAATGCTCATGCCCTGT-AGAGGACTGCAATTACACTAGCTCATACAAGGATCTCTAC 359
Query 424 GCTCACTATAA-ACTGACTCACTCCACGAATATTTT-CTGGAAT-ATTAAGCGCTTTAGA 480
|||||||| | | || || | | ||| | | | | | | || ||| | ||
Sbjct 360 ACTCACTATCGTATT-ACCCA-T--ATGAA-AGTATACCAGCTTCAT-AAGTTCATT--- 410
Query 481 TGTGCCAATTTCTT-TAC-GACCTCCATG--C-TCATCAGCGATAAGA---TACTAATTA 532
|||| || || | | || | | ||| | ||| ||||||||||| || ||||||
Sbjct 411 TGTGACA-TTCCCTCTATTGTCAAG-ATGAACATCAGCAGCGATAAGAAGATATTAATTA 468
Query 533 AAAGGG--TACATGA-GAAGAAACTATTGCTTGCAGTGCAGTGTTTTAGGGAACCGTGTG 589
|| || ||||||| || ||| || | | |||||||||||||||||||||| || ||||
Sbjct 469 GAATGGAATACATGAAGA-GAATCT-T-GTTTGCAGTGCAGTGTTTTAGGGACCCATGTG 525
Query 590 GTGTGTATGTGACTGTAAGCTTCATTGCACCATCTGCTCCAGAAGTAGGAGAGTTCTCAT 649
|||||||||| || ||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct 526 GTGTGTATGTAACCGTAAGCTGCATTGCACCATCTGCTCCAGAAGTAGGACAGTTCTCAT 585
Query 650 ATCAACTCTCCTACAATGTGGATGGACACACTGTGACTTATGAATCTCCGGAGGTGAAGA 709
||| |||||||| | |||||||| |||||| ||| ||| |||| ||||| |||||||
Sbjct 586 ATCGTCTCTCCTATACCGTGGATGGGCACACTATGATTTACAAATCACCGGATGTGAAGA 645
Query 710 GGGTT-TGTAAAGTGAGTATTGAAACCCCTCAAGAGAATTTCATGTTGATACCTCACAGT 768
| ||| || ||| ||| | || |||||||||||||||||||||||||||| ||| |||||
Sbjct 646 GAGTTCTG-AAATTGAATTTTCAAACCCCTCAAGAGAATTTCATGTTGATCCCTAACAGT 704
Query 769 TTATTGCGTGGTGACTTGTTGGAGATG 795
|||||||||||||| ||||| |||||
Sbjct 705 TTATTGCGTGGTGAAATGTTGAAGATG 731
> Ahg947471 jgi|Araly1|947471|scaffold_703700.1
Length=851
Score = 508 bits (275), Expect = 2e-143
Identities = 532/651 (82%), Gaps = 38/651 (6%)
Strand=Plus/Plus
Query 94 GATCTTGATATCCTCGATTGTCCTATTTGCTGT-GAAG-CATTGACGAGTCCTATCTTCC 151
||| ||||| | |||||||||||| |||||| | | || || | || | |||||||||||
Sbjct 114 GATTTTGATGTTCTCGATTGTCCTGTTTGCT-TCG-AGCCACTCACTATTCCTATCTTCC 171
Query 152 AGTGTGATAATGGGCATTTGGCTTGCGGTTCTTGCTGTCCCAAACTGAGTAATAAGTGCC 211
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 172 AGTGTGATAATGGGCATTTGGCTTGCTCTTCTTGCTGTCCCAAACTGAGTAATAAGTGCC 231
Query 212 CTGCATGTACTTTGCCTGTTGGTCA-CAGTCGCAGCAGAGCAATGGAGAGTGTTCTTGAA 270
|| |||||||||||| |||||| || || || ||||||||||||||||||||||||||
Sbjct 232 CTACATGTACTTTGCATGTTGG-CAACAAACGTTGCAGAGCAATGGAGAGTGTTCTTGAA 290
Query 271 TCTAT-TTTGATCCCATGCCCAAACGTCAGGTTTGGTTGTACCAAGAGTTTCTTTTATGG 329
|| || ||| |||||||||||||||| || ||||| || ||||| ||| | | ||||||
Sbjct 291 TCAATCTTT-ATCCCATGCCCAAACGCCAACTTTGGATGCACCAAAAGTATATCTTATGG 349
Query 330 GAAAGAGTCAGCTCATGAAAAAGAATGCATCTTCTCTCAATGCTCAT-GCCCTTCATCGG 388
|||||| ||| |||||||||| |||||||||||||||||||||| || ||||| ||| |
Sbjct 350 GAAAGAATCAACTCATGAAAAGGAATGCATCTTCTCTCAATGCT-ATTGCCCTGCATTGA 408
Query 389 -TCTGCGATTACACTGGCTCATACAAGGATCTCTACGCTCACTATAA-ACTGACTCAC-T 445
| ||| |||||||| |||||||||||||||||||| |||||||| || || ||| |
Sbjct 409 AT-TGCAATTACACTAGCTCATACAAGGATCTCTACACTCACTATCGTACA-ACCCACAT 466
Query 446 CCACGAATATTTTCTGGAATATTAAGCGCTTTAGATGTGCCAATTTC-TTTAC-GACCTC 503
| | | | || |||| | | | || |||| || || | |||| | ||
Sbjct 467 GGAAGTAGACCAGCTT-AATA--A-GTACATT---TGTGACA-TTCCCTTTAGTGTCCGG 518
Query 504 CATGCTCATC---AGCGATAAGA-TAC--TAATTA-AAAGGG-TACATGAGAAGAAACTA 555
||| |||| |||||||||| || |||||| ||||| |||| | |||| |||
Sbjct 519 -ATGAACATCGGCAGCGATAAGAATATAATAATTAGAAAGGAATACAC-A-AAGAGACTC 575
Query 556 TTGCTTGCAGTGCAGTGTTTTAGGGAACCGTGTGGTGTGTATGTGACTGTAAGCTTCATT 615
||| |||||||||| ||||||||||| ||||||||||||||||| || ||||||| ||||
Sbjct 576 TTGTTTGCAGTGCAATGTTTTAGGGAGCCGTGTGGTGTGTATGTAACCGTAAGCTGCATT 635
Query 616 GCACCATCTGCTCCAGAAGTAGGAGAGTTCTCATATCAACTCTCCTACAATGTGGATGGA 675
|||||||||||||| ||||||||| ||||||||||||| |||||||||| ||||||||||
Sbjct 636 GCACCATCTGCTCCTGAAGTAGGACAGTTCTCATATCATCTCTCCTACACTGTGGATGGA 695
Query 676 CACACTGTGACTTATGAATCTCCGGAGGTGAAGAGGGTT-TGTAAAGTGAG 725
|||||| | ||||||||||| || ||||||||||| || | |||||||||
Sbjct 696 CACACTATAACTTATGAATCACCCGAGGTGAAGAGAATTCT-TAAAGTGAG 745
> Ahg948107 jgi|Araly1|948107|scaffold_704336.1
Length=862
Score = 448 bits (242), Expect = 4e-125
Identities = 599/764 (78%), Gaps = 54/764 (7%)
Strand=Plus/Plus
Query 89 TGCTAGATCTTGATATCCTCGATTGTCCTATTTGCTGT-GAAG-CATTGACGAG-TCCTA 145
|||| ||||||||| | || ||||| ||||||||| | | || | || || | |||||
Sbjct 110 TGCTGGATCTTGATTTTCTTGATTGCCCTATTTGC-ATCG-AGCCGTTCAC-TGTTCCTA 166
Query 146 TCTTCCAGTGTGATAATGGGCATTTGGCTTGCGGTTCTTGCTGTCCCAAACTGAGTAATA 205
||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||
Sbjct 167 TCTTCCAGTGTGATAATGGACATTTAGCTTGCGCTTCTTGCTGTCCCAAACTGAGTAATA 226
Query 206 AGTGCCCTGCATGTACTTTGCCTGTTGGTCACAGTCGCAGCAGAGCAATGGAGAGTGTTC 265
|||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 227 AGTGCCCTACATGTACTTTGCCTGTTGGTCACATTCGCAGCAGAGCAATGGAGAGTGTTC 286
Query 266 TTGAATCTAT-TTTGATCCCATGCCCAAACGTCAGGTTTGGTTGTACCAAGAGTTTCTTT 324
|||||||||| ||| ||||||||||| |||| || ||| ||||| |||| || | ||| |
Sbjct 287 TTGAATCTATCTTT-ATCCCATGCCCGAACGCCAAGTTAGGTTGCACCACGAATGTCTCT 345
Query 325 TATGGGAAAGAGTCAGCT-CATGAAAAAGAATGCATCTTCTCTCAA-T--GCTCATGCCC 380
||||||||| ||||| | ||||| || ||||| | |||||||| | ||||||||||
Sbjct 346 TATGGGAAACAGTCAA-TACATGAGAAGGAATGTAGCTTCTCTCTCCTCTGCTCATGCCC 404
Query 381 T-T-CATCGGTCTGCGATTACACTGGCTCATACAAGGATC-TCTAC-GCTCACTATAA-A 435
| | || | |||| |||||||| |||||||| | | | ||| | ||||| || |
Sbjct 405 TCTACAA-GA-CTGCAATTACACTAGCTCATACTCTAA-CATGTACCG-TCACTTTATTA 460
Query 436 CTGACTCACTCCACGAATATTTTCTGGAATATTAAGCGCTTTAGATGTGCCAATTTCTTT 495
|||| ||| | | ||| | | | | | || | || | |||| || |||| |
Sbjct 461 GTGAC-CAC-C-A-GAACAAATA-T--A-TGTT--GTTCTGT---TGTGACACTTTCGCT 507
Query 496 AC-GACCTCCATGC-TCATCAGCGATAAGATACTAATTAAAAGG-GTACATGAGAAGAAA 552
| | | ||| | || |||||||||||| | |||| | | | | ||||| | ||
Sbjct 508 AATGTTCGG-ATGAAT-ATAAGCGATAAGATATTGATTAGA-GTTGAATATGAG--GTAA 562
Query 553 -C-TATTGCTTGCAGTGCAGTGTTTTAGGGAACCGTGTGGTGTGTATGTGACTGTAAGCT 610
| || || |||||||||| ||||||| ||| ||||||||||| ||||| ||||||||||
Sbjct 563 GCCTAGTGTTTGCAGTGCAATGTTTTAAGGAGCCGTGTGGTGTCTATGTAACTGTAAGCT 622
Query 611 TCATTGCACCATCTGCTCCAGAAGTAGGAGAGTTCTCATATCAACTCTCCTACAATGTGG 670
||||||||| ||| || |||||||||| | |||||||| || |||||||||| |||||
Sbjct 623 GCATTGCACCGTCTTTTCAAGAAGTAGGAAAATTCTCATACCATCTCTCCTACACTGTGG 682
Query 671 ATGGACACACTGTGACTTATGAATCTCCGGAGGTGAAGAGGGTT-TGTAAAGTGAG-TAT 728
|||| |||||| ||||||| ||||| ||| | ||||||| ||| | ||||||||| ||
Sbjct 683 ATGGGCACACTATGACTTACGAATCACCGAAAGTGAAGAAAGTTCT-TAAAGTGAGCTAC 741
Query 729 TGAAACCCCTCAAGAGAATTTCATGTTGATACCTCACAGTTTATTGCGTGGTGAC-TTGT 787
||| ||| |||||| |||||||||||| ||||||||||||||||||||||| || |
Sbjct 742 C-AAATACCTGAAGAGAGTTTCATGTTGATCCCTCACAGTTTATTGCGTGGTGAAATT-T 799
Query 788 TGGAGATGCAGGTTTTTATCATCGAAAATGTGGACCAAGAGTAA 831
|||| ||| || ||| |||| ||| || || | ||||||||
Sbjct 800 TGGATATGAAGCTTTGCATCAA-GAAGTTGAGG-C-AAGAGTAA 840
> Ahg947533 jgi|Araly1|947533|scaffold_703762.1
Length=484
Score = 169 bits (91), Expect = 4e-41
Identities = 155/185 (84%), Gaps = 8/185 (4%)
Strand=Plus/Plus
Query 90 GCTAGATCTTG-ATATCCTCGATTGTCCTATTTGCTGTGAAG-CATTGACGAGTCCTATC 147
||| ||| ||| || | |||||||||||| ||||||| | || || | || | || || |
Sbjct 105 GCTGGAT-TTGTATGTACTCGATTGTCCTGTTTGCTGCG-AGCCACTCACTATTCATACC 162
Query 148 TTCCAGTGTGATAATGGGCATTTGGCTTGCGGTTCTTGCTGTCCCAAACTGAGTAATAAG 207
|||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct 163 TTCCAGTGTGATAATGGGCACTTGGCTTGCTCTTCTTGCTGTCCCAAACTGAGTAATAAG 222
Query 208 TGCCCTGCATGTACTTTGCCTGTTGGTCACAGTCGCA-GCAG-AGCAATGGAGAGTGTTC 265
|||||||||||| |||||||| |||| ||| ||| | | | |||||||||||| ||||
Sbjct 223 TGCCCTGCATGTTCTTTGCCTATTGGAAACAATCG-ATGT-GTAGCAATGGAGAGGGTTC 280
Query 266 TTGAA 270
||||
Sbjct 281 ATGAA 285
> Ahg947468 jgi|Araly1|947468|scaffold_703697.1
Length=727
Score = 165 bits (89), Expect = 5e-40
Identities = 172/211 (82%), Gaps = 9/211 (4%)
Strand=Plus/Plus
Query 566 TGCAGTGTTTTAG-GGAACCGTGTGGTGTGTATGTGACTGTAAGCTTCATTGCACCATCT 624
|||| || ||| | ||| || | |||||| ||||| |||||||||| |||||||||||||
Sbjct 442 TGCAATG-TTTCGAGGAGCCATTTGGTGTTTATGTAACTGTAAGCTGCATTGCACCATCT 500
Query 625 GCTCCAGAAGTAGGAGAGTTCTCATATCAACTCTCCTACA--A-TGTGGATGGACACACT 681
||||||||||||||||||||||||||||| |||||||||| | || ||||| |||||||
Sbjct 501 GCTCCAGAAGTAGGAGAGTTCTCATATCATCTCTCCTACACTACTGAGGATGAACACACT 560
Query 682 GTGACTTATGAATCTCCGGAGGTGAAGAGGGTT-TGTAAAGTGAG-TATTGAAACCCCTC 739
||||||| |||| || ||||||| | |||| | ||||||||| | ||| |||
Sbjct 561 ATGACTTACCAATCACCAAAGGTGAAAAAGGTTCT-TAAAGTGAGCTCCC-AAAGACCTA 618
Query 740 AAGAGAATTTCATGTTGATACCTCACAGTTT 770
|||||| || ||| ||||| ||||||| |||
Sbjct 619 AAGAGAGTTCCATATTGATCCCTCACAATTT 649
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 30727071102
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5