BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G38040.1
Length=1350
Score E
Sequences producing significant alignments: (Bits) Value
Ahg494174 jgi|Araly1|494174|fgenesh2_kg.7__3607__AT5G38040.1 1799 0.0
Ahg948088 jgi|Araly1|948088|scaffold_704317.1 1230 0.0
Ahg494179 jgi|Araly1|494179|fgenesh2_kg.7__3612__AT5G37950.2 915 0.0
Ahg485040 jgi|Araly1|485040|fgenesh2_kg.5__1032__AT3G46670.1 732 0.0
> Ahg494174 jgi|Araly1|494174|fgenesh2_kg.7__3607__AT5G38040.1
Length=1329
Score = 1799 bits (974), Expect = 0.0
Identities = 1230/1351 (91%), Gaps = 27/1351 (2%)
Strand=Plus/Plus
Query 1 ATGGAGGAGAAGCTCT-CGAGGAGAAGAAGAG-TAGTGTTGGTTCCAGTTCCAGCTCAAG 58
||||| ||||||| | ||||||||||||| | ||||||||||||||| |||||||||||
Sbjct 1 ATGGAAAAGAAGCT-TGCGAGGAGAAGAAG-GCTAGTGTTGGTTCCAGCTCCAGCTCAAG 58
Query 59 GACATATAACTCCAATGATACAACTTGCAAAAGCACTTCACTCAAAAGGCTTCTCTATTA 118
||||||||| ||||||||| ||||| |||||| | ||| ||| ||| || ||||||||||
Sbjct 59 GACATATAAATCCAATGATGCAACTCGCAAAAACCCTTTACTTAAAGGGTTTCTCTATTA 118
Query 119 CAGTTGTTCAAACCAAGTTCAACTACTTAAACCCTTCAAATGATTTGTCTGATTTTCAGT 178
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 119 CAGTTGCTCAAACCAAGTTCAACTACTTAAACCCTTCAAGTGATTTGTCTGATTTTCAGT 178
Query 179 TTGTAACCATCCCAGAGAACTTACCAGTGTCTGATCTTAAGAATCTAGGACCAGGACGGT 238
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 179 TTGTAACCATCCCAGAGAACTTACCAGTGTCTGATCTTAAGAATCTTGGACCAGGACGGT 238
Query 239 TTCTGATTAAGCTAGCTAATGAGTGTTATGTTAGCTTTAAGGATTTGTTAGGTCAGTTGT 298
|| |||||||||||||||| |||||||||||||||||||| || |||||||||||||| |
Sbjct 239 TTTTGATTAAGCTAGCTAAAGAGTGTTATGTTAGCTTTAAAGAGTTGTTAGGTCAGTTAT 298
Query 299 TGGTTAATGAAGAAGAAGAGATCGCTTGTGTTATCTACGACGAGTTCATGTACTTTGTTG 358
|||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 299 TGGTTAAT------GAAGAGATCGCTTGTGTTATCTACGATGAGTTCATGTACTTTGTTG 352
Query 359 AAGTAGCAGTTAAAGAGTTTAAGCTTCGTAATGTTATTTTAAGTACTACAAGTGCAACGG 418
||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 353 AAGCAGCAGTTGAAGAGTTTAAGCTTCGTAATGTTATTTTAAGTACTACAAGTGCAACAG 412
Query 419 CTTTTGTTTGTCGCTTTGTTATGTGTGAACTCTATGCTAAAGATGGTTTGGCTCAACTTA 478
||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct 413 CTTTTGTTTGTCGCTTTGTTATGTGCAAACTCTATGCAAAAGATGGTTTGGCTCAACTT- 471
Query 479 AAGAAGGCGGTGAGCGAGAAGTGGAGTTAGTACCGGAGTTGTATCCTATACGGTACAAAG 538
| || || || | |||||||||||||||||| |||||||||||||||||||
Sbjct 472 -A-AA------GA---AG-A--GGAGTTAGTACCGGAGTTATATCCTATACGGTACAAAG 517
Query 539 ATTTACCAAGTTCGGTATTTGCATCTGTAGAATCTTCAGTGGAGTTGTTTAAGAATACAT 598
|| |||||||||| |||||||| ||||| |||| ||| ||||||||||||||||||||||
Sbjct 518 ATCTACCAAGTTCAGTATTTGCTTCTGTCGAATGTTCGGTGGAGTTGTTTAAGAATACAT 577
Query 599 GTTATAAAGGGACAGCTTCCTCTGTGATAATCAACACAGTGAGGTGTCTAGAGATGTCAT 658
|||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct 578 GTTATAAAGGGACAGCTTCCTCTGTGATAATCAACACAGTTCGGTGTCTAGAGATCTCAT 637
Query 659 CTTTGGAGTGGCTTCAACAAGAACTTGAAATCCCGGTGTATTCTATAGGCCCGCTTCATA 718
||||||| ||||||||||||||||| || || ||||||||| |||||||||| ||||| |
Sbjct 638 CTTTGGATTGGCTTCAACAAGAACTAGATATTCCGGTGTATCCTATAGGCCCTCTTCACA 697
Query 719 TGGTGGTGTCAGCTCCTCCTACGAGTCTTTTAGAAGAGAACGAGAGCTGTATAGAATGGT 778
||| ||| || ||||| | ||||||||||||||||||||| |||||||| |||||||||
Sbjct 698 TGGCGGTTTCTGCTCCGCGTACGAGTCTTTTAGAAGAGAATGAGAGCTGCATAGAATGGC 757
Query 779 TGAACAAACAAAAGCCGAGCTCGGTGATATACATAAGCTTGGGAAGTTTTACTTTGATGG 838
|||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct 758 TGAACAAACAAAAGCCGAGCTCGGTGATATACATAAGCTTGGGAAGCTTTACTATGATGG 817
Query 839 AAACTAAAGAAATGTTGGAGATGGCTTATGGGTTTGTTAGTAGTAACCAACACTTCTTGT 898
||||||||||| ||||||||||||||| ||||| | |||||||||||||||||||||||
Sbjct 818 AAACTAAAGAAGTGTTGGAGATGGCTTCGGGGTTGGATAGTAGTAACCAACACTTCTTGT 877
Query 899 GGGTGATTCGACCGGGATCTAT-ATGTGGTTCTGAAATCTCTGAGGAAGAGTTGTTGAAG 957
||||||||||||| ||||| | | |||||||||||||||||||||||||||||||||||
Sbjct 878 GGGTGATTCGACCAGGATCCGTTA-GTGGTTCTGAAATCTCTGAGGAAGAGTTGTTGAAG 936
Query 958 AAGATGGTAATTACGGATCGAGGTTACATTGTGAAATGGGCGCCGCAAAAACAAGTGCTT 1017
|||||||||| ||| |||||||||||||| ||||||||||||||||| || |||||||||
Sbjct 937 AAGATGGTAACTACAGATCGAGGTTACATAGTGAAATGGGCGCCGCAGAAGCAAGTGCTT 996
Query 1018 GCACATTCTGCGGTTGGAGCGTTCTGGAGTCATTGTGGATGGAACTCGACTTTAGAAAGT 1077
|||||||| |||||| ||||||| ||||||||||| |||||||| |||||| |||||||
Sbjct 997 GCACATTCCGCGGTTAGAGCGTTTTGGAGTCATTGCGGATGGAATTCGACTCTAGAAAGC 1056
Query 1078 CTTGGTGAAGGAGTTCCATTGATATGTAGGCCTTTTACTACTGATCAAAAGGGGAATGCA 1137
|| ||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||
Sbjct 1057 CTCGGTGAAGGAGTTCCAATGATATGTAGACCTTTTACAACTGATCAAAAGGGGAATGCA 1116
Query 1138 AGGTACTTGGAGTGTGTGTGGAAAGTAGGAATTCAAGTGGAGGGTGAGCTAGAGAGAGGC 1197
||||||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||
Sbjct 1117 AGGTACTTGGAATGTGTATGGAAAGTAGGGATTCAAGTAGAGGGTGAGCTAGAGAGAGGC 1176
Query 1198 GCAATCgagagagctgtgaagaggttaatggtggatgaagaaggagaagagatgaagaga 1257
|| |||| | ||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1177 GCGGTCGAAAAAGCTGTGAAGAGGTTAATGGTCGATGAAGAAGGAGAAGAGATGAAGAGA 1236
Query 1258 agagCTCTAAGTTTAAAAGAGAAACTCAAAGCCTCTGTTTTAGCTCAAGGTTCTTCACAT 1317
|||||||||| ||| |||||||||||||||| |||||||||||||||||| |||||| ||
Sbjct 1237 AGAGCTCTAAATTTGAAAGAGAAACTCAAAGACTCTGTTTTAGCTCAAGGCTCTTCATAT 1296
Query 1318 AAATCACTAGATGACTTCATCAAGACTCTGT 1348
|| ||||| ||||||||||||||||||||||
Sbjct 1297 AACTCACTTGATGACTTCATCAAGACTCTGT 1327
> Ahg948088 jgi|Araly1|948088|scaffold_704317.1
Length=1393
Score = 1230 bits (666), Expect = 0.0
Identities = 1142/1370 (83%), Gaps = 40/1370 (3%)
Strand=Plus/Plus
Query 1 ATGGAGGAGAAGCTCTCGAGGAGAAGAA-GAGTAGTGTTGGTTCCAGTTCCAGCTCAAGG 59
|||||||| |||| |||||| |||| || | |||||| |||||| |||||| |||||
Sbjct 23 ATGGAGGAAAAGCAAGAGAGGAGGAGAAGGA-TCGTGTTGATTCCAGCTCCAGCACAAGG 81
Query 60 ACATATAACTCCAATGATACAACTTGCAAAAGCACTTCACTCAAAAGGCTTCTCTATTAC 119
||| ||| |||||||||| ||||| || | ||| ||||||| ||| || ||||| |||||
Sbjct 82 ACACATATCTCCAATGATGCAACTCGCGAGAGCCCTTCACTTAAAGGGTTTCTCCATTAC 141
Query 120 AGTTGTTCAAACCAAGTTCAACTACTTAAACCCTTCAAATGA-TTTGTCTGATTTTCAGT 178
|||| ||| ||||||||||| ||||| || |||||||| || || | ||||||||||||
Sbjct 142 GGTTGCTCAGACCAAGTTCAATTACTTGAAGCCTTCAAAAGACTTAG-CTGATTTTCAGT 200
Query 179 TTGTAACCATCCCAGAGAACTTACCAGTGTCTGATCTTAAGAATCTAGGACCAGGACGGT 238
| | ||||||||||||| |||||||| || ||||| ||| ||||||| |||| |||
Sbjct 201 TCATCACCATCCCAGAGAGCTTACCAGCCTCGGATCTGAAGGATCTAGGGCCAGTTTGGT 260
Query 239 TTCTGATTAAGCT-AGCTAATGAGTGTTATGTTAGCTTTAAGGATTTG-TTAGGTCAGTT 296
|||| ||||| | | | || |||||| | |||||||| || || || || ||||| ||
Sbjct 261 TTCTTATTAAAATCAAC-AAAGAGTGTGAGGTTAGCTTCAA-GAAGTGTTTGGGTCAATT 318
Query 297 GTTGG-TTAATGAAGAAGAAGAGATCGCTTGTGTTATCTACGACGAGTTCATGTACTTTG 355
|||| || || ||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct 319 TTTGGCGCAA-CAACAAGAAGAGATCGCATGTGTCATCTACGACGAGTTCATGTACTTTG 377
Query 356 TTGAAG-TAGCAGTTAAAGAGTTTAAGCTTCGTAATGTTATTTTAAGTA-CTACAAGTGC 413
||||| || ||| ||||||| ||| |||| || ||||||| |||| | | || |||
Sbjct 378 CTGAAGCTA-CAGCCAAAGAGTATAACCTTCCCAAAATTATTTTCAGTACCGA-AAATGC 435
Query 414 AACGGCTTTTGTTTGTCGCTTTGTTATGTGTGAACTCTATGCTAAAGATGGTTTGGCTCA 473
||||||||||| |||||||| || ||||| |||||||||| |||||||| |||||||
Sbjct 436 AACGGCTTTTGCTTGTCGCTATGCCATGTGCAAACTCTATGCAAAAGATGGCTTGGCTCC 495
Query 474 ACTTAAAGAAGGCGGTGAGCGAGAAGTGGAGTTAGTACCGGAGTTGTAT--CCTATACGG 531
|| |||||||| ||| |||||||| |||| |||| || |||||| || ||| || |
Sbjct 496 CCTCAAAGAAGGATGTGGGCGAGAAGAGGAGCTAGTGCCAGAGTTGCATCCCCT-TA-GA 553
Query 532 TACAAAGATTTACCAAGTTCGGTATTTGCATCTGTAGAATCTTCAGTGG-AGTTGTTTAA 590
|||||||| |||||| ||| | ||||||| | |||||| | ||||||| || |||||||
Sbjct 554 TACAAAGACCTACCAACTTCAGCATTTGCACCAGTAGAAGCCTCAGTGGAAG-TGTTTAA 612
Query 591 GAA-TACATGTTATAAAGGGACAGCTTCCTCTGTGATAATCAACACAGTGAGGTGTCTAG 649
|| | ||||| ||| ||| |||||||||||| ||||||||||||||||||| |||||||
Sbjct 613 -AAGTTCATGTGATATAGGCACAGCTTCCTCTATGATAATCAACACAGTGAGTTGTCTAG 671
Query 650 AGATGTCATCTTTGGAGTGGCTTCAACAAGAACTTGAAATCCCGGTGTATTCTATAGGCC 709
|||| ||||| ||||| |||||||||||||||||| |||| || | ||| |||||||||
Sbjct 672 AGATTTCATCCTTGGACTGGCTTCAACAAGAACTTAAAATTCCAATATATCCTATAGGCC 731
Query 710 CGCTTCATATGGTGG-TGTCAGCTCCTCCTACGAGTCTTTTAGAAGAGAACGAGAGCTGT 768
| ||||| ||| ||| | |||||||||||||| ||||| |||||||| | ||||||||
Sbjct 732 CTCTTCACATGATGGCT-TCAGCTCCTCCTACAAGTCTAATAGAAGAGGATGAGAGCTGC 790
Query 769 ATAGAATGGTTGAACAAACAAAAGCCGAGCTCGGTGATATACATAAGCTTGGGAAGTTTT 828
||||| ||| |||||||||||||||||||||||||||| |||||||| |||||||| |||
Sbjct 791 ATAGATTGGCTGAACAAACAAAAGCCGAGCTCGGTGATTTACATAAGTTTGGGAAGCTTT 850
Query 829 ACTTTGATGGAAACTAAAGAAATGTTGGAGATGGCTTATGGGTTTGTTAGTAGTAACCAA 888
||||||||||||||||||||| ||||||| ||||||| ||||| |||||||||||||||
Sbjct 851 ACTTTGATGGAAACTAAAGAAGTGTTGGAAATGGCTTCGGGGTTGGTTAGTAGTAACCAA 910
Query 889 CACTTCTTGTGGGTGATTCGACC-GGGATCTATA-TGTGGTTCTGAAATCTCTGAGGAAG 946
|||||||||||||||||| |||| ||| || || | |||||||||| | ||| | || |
Sbjct 911 CACTTCTTGTGGGTGATTAGACCCGGG-TCCATCCT-TGGTTCTGAATTGTCTAATGAGG 968
Query 947 AGTTGTTGAAG-AAGATGGTAAT-TACGGATCGAGGTTACATTGTGAAATGGGCGCCGCA 1004
|||| || | | ||||||| ||| | | |||||||| ||||||||||||||||| || ||
Sbjct 969 AGTTATTTA-GTAAGATGGAAATAT-CTGATCGAGGCTACATTGTGAAATGGGCTCCACA 1026
Query 1005 AAAACAAGTGCTTGCACATTCTGCGGTTGGAGCGTTCTGGAGTCATTGTGGATGGAACTC 1064
||| ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct 1027 AAAGCAAGTTCTTGCACATTCTGCGGTTGGAGCATTTTGGAGTCATTGTGGATGGAACTC 1086
Query 1065 GACTTTAGAAAGTCTTGG-TGAAGGAGTTCC-ATTGATATGTAGGCCTTTTACTACTGAT 1122
|||| |||| || | ||| |||||||||||| || ||| |||||||||||||||||||||
Sbjct 1087 GACTCTAGAGAG-CATGGGTGAAGGAGTTCCGAT-GATTTGTAGGCCTTTTACTACTGAT 1144
Query 1123 CAAAAGGGGAATGCAAGGTACTTGGAGTGTGTGTGGAAAGTAGGAATTCAAGTGGAGGGT 1182
||||||| ||||| ||||| |||||||||| |||| ||| || |||| |||||||||
Sbjct 1145 CAAAAGGTAAATGCGCGGTACGTGGAGTGTGTCTGGAGAGTTGGGGTTCACGTGGAGGGT 1204
Query 1183 GAGCTAGAGAGAGGCGCAATCgagagagctgtgaagaggttaatggtggatgaagaagga 1242
|||||||||| ||| | | |||||||||||||||| ||||||||||||||||||||||||
Sbjct 1205 GAGCTAGAGAAAGGAGTAGTCGAGAGAGCTGTGAAAAGGTTAATGGTGGATGAAGAAGGA 1264
Query 1243 gaagagatgaaga-gaagagCTCTAAGTTTAAAAGAGAAACTCAAA-GCCTCTGTTTTAG 1300
|| |||||||||| || ||||||| ||||| ||||||||||||||| || ||||| ||
Sbjct 1265 GAGGAGATGAAGATGA-GAGCTCTCAGTTTGAAAGAGAAACTCAAATGC-TCTGTACTAC 1322
Query 1301 CTCAAGGTTCTTCACATAAATCACTAGATGACTTCATCAAGACTCTGTGA 1350
|| ||||||||||||| | ||||| |||||||| ||||||||||| |||
Sbjct 1323 CTGAAGGTTCTTCACACGATTCACTGGATGACTTAATCAAGACTCTATGA 1372
> Ahg494179 jgi|Araly1|494179|fgenesh2_kg.7__3612__AT5G37950.2
Length=1053
Score = 915 bits (495), Expect = 0.0
Identities = 884/1069 (83%), Gaps = 38/1069 (4%)
Strand=Plus/Plus
Query 79 CAACTTGCAAAAGCACT-TCACTCAAAAGGCTTCTCTATTACAGTTGTTCAAACCAAGTT 137
|||||||| | ||| || | | | ||| || ||||| |||||||||| ||| || |||||
Sbjct 4 CAACTTGCGAGAGCCCTAT-ATTTAAAGGGTTTCTCCATTACAGTTGCTCAGACAAAGTT 62
Query 138 CAACTACTTAAACCCTTCAAATGATTTGTCTGATTTTCAGTTTGTAACCATCCCAGAGAA 197
||| ||||||||||||||||| || ||| |||||||||||||| | |||||||||||||
Sbjct 63 CAATTACTTAAACCCTTCAAAAGACTTGGCTGATTTTCAGTTTATCACCATCCCAGAGAG 122
Query 198 CTTACCAGTGTCTGATCTT-AAGAATCTAGGACCAGGACGGTTTCTGATTAAGCT-AGCT 255
|||||||| || ||| || ||||||||||| |||| ||||||| ||||| | | |
Sbjct 123 CTTACCAGCCTCGGAT-TTGAAGAATCTAGGGCCAGTTTGGTTTCTTATTAAAATCAAC- 180
Query 256 AATGAGTGTTATG-TTAGCTTTAAGGATTTG-TTAGGTCAGTTGTTGGTT--AATGAAGA 311
|| |||||| | | ||||||| || || || || ||||||||||| ||| || || |
Sbjct 181 AAAGAGTGTGA-GATTAGCTTCAA-GAAGTGTTTGGGTCAGTTGTT-GTTGCAA-CAACA 236
Query 312 AGAAGAGATCGCTTGTGTTATCTACGACGAGTTCATGTACTTTGTTGAAG-TAGCAGTTA 370
|||||||||||| ||||| ||||||||||||||||||||||||| ||||| | |||| |
Sbjct 237 AGAAGAGATCGCATGTGTCATCTACGACGAGTTCATGTACTTTGCTGAAGCT-GCAGCCA 295
Query 371 AAGAGTTTAAGCTTCGTAATGTTATTTTAAGTA-CTACAAGTGCAACGGCTTTTGTTTGT 429
|||||||| | |||| || |||||||| |||| | | || |||||||||||||| || |
Sbjct 296 AAGAGTTTGACCTTCCCAAAGTTATTTTCAGTACCGA-AAATGCAACGGCTTTTGCTTCT 354
Query 430 CGCTTTGTTATGTGTGAACTCTATGCTAAAGATGGTTTGGCTCAACTTAAAGAAGGCGGT 489
|||| || ||||| |||||||||| |||||||| ||||||| || |||||||| ||
Sbjct 355 CGCTCTGCCATGTGCAAACTCTATGCAAAAGATGGCTTGGCTCCTCTCAAAGAAGGATGT 414
Query 490 -G-AGCGAGAAGTGGAGTTAGTACCGGAGTTGTAT-CCTATACGGTACAAAGATTTACCA 546
| || ||| | |||| |||| || |||||| || ||| || |||||||||| |||||
Sbjct 415 GGAAGTGAG--GAGGAGCTAGTGCCAGAGTTGCATCCCT-TAAGGTACAAAGACCTACCA 471
Query 547 AGTTCGGTATTTGCATCTGTAGAATCTTCAGTGG-AGTTGTTTAAGAATACATGTTATAA 605
| ||| | ||||||| | |||||| | ||||||| || ||||||| ||| ||||| | ||
Sbjct 472 ACTTCAGCATTTGCACCAGTAGAAGCCTCAGTGGAAG-TGTTTAAAAATTCATGTGAGAA 530
Query 606 AGGGACAGCTTCCTCTGTGATAATCAACACAGTGAGGTGTCTAGAGATGTCATCTTTGGA 665
|||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||
Sbjct 531 AGGGACAGCTTCCTCTATGATAATCAACACAGTTCGGTGTCTAGAGATTTCATCTTTGGA 590
Query 666 GTGGCTTCAACAAGAACTTGAAATCCCGGTGTATTCTATAGGCCCGCTTCATATGGTGGT 725
|||||||||||||||||| |||| || | ||| || |||| || ||||| ||||| |
Sbjct 591 GTGGCTTCAACAAGAACTCAAAATTCCAATATATCCTGTAGGACCTCTTCACATGGTT-T 649
Query 726 GT-CAGCTCCTCCTACGAGTCTTTTAGAAGAGAACGAGAGCTGTATAGAATGGTTGAACA 784
| ||||||||||||||||||| |||||||||| ||||| || ||||| ||| ||||||
Sbjct 650 CTTCAGCTCCTCCTACGAGTCTACTAGAAGAGAATGAGAGTTGCATAGATTGGCTGAACA 709
Query 785 AACAAAAGCCGAGCTCGGTGATATACATAAGCTTGGGAAGTTTTACTTTGATGGAAACTA 844
|||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct 710 AACAAAAGCCAAGCTCAGTGATATACATAAGCTTGGGAAGCTTTACTTTGATGGAAACTA 769
Query 845 AAGAAATGTTGGAGATGGCTTATGGGTTTGTTAGTAGTAACCAACACTTCTTGTGGGTGA 904
||||| ||||||| ||||||| |||||| ||||||||||||||| |||||||||||| ||
Sbjct 770 AAGAAGTGTTGGAAATGGCTTTTGGGTTGGTTAGTAGTAACCAATACTTCTTGTGGGCGA 829
Query 905 TTCGACCGGGATCTATATGT-GGTTCTGAAATCTCTGAGGAAGAGTTGTTGAAGAAG-AT 962
| ||||| || || ||| || ||||||||| | ||| | || || || || | | | ||
Sbjct 830 TCCGACCTGGCTCCATA-GTTGGTTCTGAATTATCTAATGAGGAATTATTTA-GTACTAT 887
Query 963 GGTAATTAC-GGATCGAGGTTACATTGTGAAATGGGCGCCGCAAAAACAAGTGCTTGCAC 1021
| ||| || ||||||||| ||||||||||||||||| ||||| ||||||||||||||||
Sbjct 888 TGAAAT-ACCGGATCGAGGCTACATTGTGAAATGGGCTCCGCAGAAACAAGTGCTTGCAC 946
Query 1022 ATTCTGCGGTTGGAGCGTTCTGGAGTCATTGTGGATGGAACTCGACTTTAGAAAGTCTTG 1081
|| ||||| || ||||||| |||||||||||||||||||||||||| |||| ||| | |
Sbjct 947 ATCCTGCGATTCGAGCGTTTTGGAGTCATTGTGGATGGAACTCGACCCTAGAGAGTATGG 1006
Query 1082 GTGAAGG-AGTTCC-ATTGATATGTAGGCCTTTTACTACTGATCAAAAG 1128
| ||||| | |||| || ||| |||||||||||||||||||||||||||
Sbjct 1007 GGGAAGGGA-TTCCGAT-GATTTGTAGGCCTTTTACTACTGATCAAAAG 1053
> Ahg485040 jgi|Araly1|485040|fgenesh2_kg.5__1032__AT3G46670.1
Length=1588
Score = 732 bits (396), Expect = 0.0
Identities = 1066/1376 (77%), Gaps = 99/1376 (7%)
Strand=Plus/Plus
Query 1 ATGGAGGAGAAGCTC-TCGAGGAGAAGAAGAGTAGTGTTGGTTCCAGTTCCAGCTCAAGG 59
|||||||| |||| | |||||||||| | ||| |||| |||||||||||||||||||
Sbjct 173 ATGGAGGAAAAGC-CGGCGAGGAGAAG--G-GTATTGTTAATTCCAGTTCCAGCTCAAGG 228
Query 60 ACATATAACTCCAATGATACAACTTGCAAAAGCACTTCACTCAAAAGGCTTCTCTATTAC 119
||||||| |||||||||| ||||| |||||| | ||| ||| ||| || ||||| || ||
Sbjct 229 ACATATATCTCCAATGATGCAACTCGCAAAAACCCTTTACTTAAAGGGTTTCTCAATCAC 288
Query 120 AGTTGTTCAAACCAAGTTCAACTACTTAAACCCTTCAAATGATTTGTCTGATTTTCAGTT 179
| ||| ||| |||||||| || || || | ||||||| |||| || |||||||||||||
Sbjct 289 AATTGCTCAGACCAAGTTTAATTATTTTAGCCCTTCAGATGACTTCACTGATTTTCAGTT 348
Query 180 TGTAACCATCCCAGAGAA-CTTACCAGTGTCTGATCTTAAGAATCTAGGACCAGGACG-G 237
||| || || || || || |||||| | ||||||| |||||||||| || |||| | | |
Sbjct 349 TGTCACTATTCCGGA-AAGCTTACCGGAGTCTGATTTTAAGAATCTCGGGCCAGTA-GAG 406
Query 238 TTTCTG-ATTAAGCT-AGCTAATGAGTGTTATGTTAGCTTTAAGGATTTG-TTAGGTCAG 294
||| || | |||||| | | || |||||| | || |||||||| || || || ||||||
Sbjct 407 TTTATGCA-TAAGCTCAAC-AAAGAGTGTCAGGTGAGCTTTAAAGA-CTGTTTGGGTCAG 463
Query 295 TTGTTGGTTAATG-AAGAA-G-AA-GAGATCGCTTGTGTTATCTACGACGAGTTCATGTA 350
||||| | | | || || | || |||||||| ||||| |||| ||||||||| ||||
Sbjct 464 TTGTT-G--CA-GCAACAAGGTAATGAGATCGCATGTGTCGTCTATGACGAGTTCGTGTA 519
Query 351 CTTTGTTGAAG-TAGCAGTTAAAGAGTTTAAGCTTCGTAATGTTATTTTAAGTACTACAA 409
||||| ||||| || ||| ||||||| |||||||| || |||||||| || || ||||
Sbjct 520 CTTTGCTGAAGCTA-CAGCCAAAGAGTATAAGCTTCCAAACGTTATTTTCAGCACAACAA 578
Query 410 GTGCAACGGCTTTTGTTTGTCGCTTTGTTATGT-G-TGAACTCTATGCTAAA-GATGGT- 465
|||| ||||||||||||||||||| || ||| | | |||||||||| ||| || ||
Sbjct 579 GTGCCACGGCTTTTGTTTGTCGCTCTG-TAT-TCGACAAACTCTATGC-AAACAAT-GTC 634
Query 466 TTGGCTCAACTT-AAAGAAGGC--GGTGAGCGAGAAGTGGAGTTAGTACCGGAGTTGT-A 521
||| ||| ||| |||||| | | || | | || ||| |||| || ||||| | |
Sbjct 635 TTGTCTC-CCTTGAAAGAACCCAAAG-GA-CAACAAAACGAGCTAGTGCCAGAGTT-TCA 690
Query 522 TCCTAT-ACGGTACAAAGA-TTTACCAAG-TTCGGTATT-TGCATC-TGTAGAATCT-TC 575
||| | | | | |||||| ||| || | ||| ||| ||||| | ||||| | |
Sbjct 691 TCCCCTGA-GATGCAAAGACTTT-CC-GGTTTC-ACATTGGGCATCAT-TAGAAAGTAT- 744
Query 576 AGTGGAGTTGTTTAAGAATACATGTT-ATAAAGGGACAGCTTCCTCTGTGATAATCAACA 634
| |||| ||| || ||||||| ||| | | | |||||||||||||||||||||||||||
Sbjct 745 AATGGAACTGTATAGGAATACA-GTTGACACACGGACAGCTTCCTCTGTGATAATCAACA 803
Query 635 CAGTGAGGTGTCTAGAGATG-TCATCTTTGGAGTGGCTT-CAACAAGAACTTGAAATCCC 692
| | ||| |||||||||| | |||||| || | || | |||||| | || |||| ||
Sbjct 804 CTGCGAGCTGTCTAGAGA-GCTCATCTCTGTC-TCGCCTGCAACAACAGCTAAAAATTCC 861
Query 693 GGTGTATTCTATAGGCCC-GCTTCATATGGTGGTGTCAGCTCCTCCTACGAGTCTT-TTA 750
||||| |||||||||| | |||| |||||| || | | |||||| ||||| ||
Sbjct 862 AATGTATCCTATAGGCCCTG-TTCACCTGGTGGCCTC-GA-C-TCCTACAAGTCTGCTT- 916
Query 751 GAAGAGAACGAGAGCTGTATAGAATGGTTGAACAAACAAAAGCCGAGCTCGGTGATATAC 810
||||||||| |||||||||| ||||||||||||||||||||| | || || |||| |
Sbjct 917 GAAGAGAACAAGAGCTGTATCGAATGGTTGAACAAACAAAAGAAAAATTCTGTAATATTC 976
Query 811 ATAAGCTTGGGAAGTTTTA-CTTTGATGGAAACTAAA-GAAATGTTGGAGA-TGGCTTAT 867
||||||||||||| || | |||||||||||| | || || || |||||| || ||| |
Sbjct 977 GTAAGCTTGGGAAGCTT-AGCTTTGATGGAAA-TCAATGAGGTGATGGAGACTG-CTT-T 1032
Query 868 GGGTTTGT-TAGTAGTAACCAACACTTCTTGTGGGTGATTCGACCGGGATCTA-TATGTG 925
||| ||| |||||| |||||||| ||||||||||||||||| || ||||| | || |||
Sbjct 1033 GGGATTGGATAGTAGCAACCAACAGTTCTTGTGGGTGATTCGGCCAGGATC-AGTACGTG 1091
Query 926 GTTCTGAAATCTCT-GAGGAAGAGTTGT-TGAAGAAGAT--G---G-TAATTACGGATCG 977
||||| | || | ||| || ||| | ||| || | | | ||||| ||| |||
Sbjct 1092 GTTCT-ACATGGATAGAG-AAC--TTGCCT-AAGGAGTTTAGTAAGATAATTTCGGGTCG 1146
Query 978 AGGTTACATTGTGAAATGGGCGCCGCAAAAACAAGTGCTTGCACATTCTGCGGTTGGAGC 1037
|||||||||||||||||||| || || || |||| ||| | || |||| || ||||
Sbjct 1147 GGGTTACATTGTGAAATGGGCTCCACAGAAGGAAGTACTTTCTCACCCTGCAGTAGGAGG 1206
Query 1038 GTTCTGGAGTCATTGTGGATGGAACTCGACTTTAGAAAGTCTT-GGTGAAGGAGTTCCAT 1096
||| ||||| || ||||||||||||||||| |||| || | | || ||||||||||||
Sbjct 1207 GTTTTGGAGCCACTGTGGATGGAACTCGACACTAGAGAG-CATCGGGGAAGGAGTTCCAA 1265
Query 1097 TGATATGTAGGCC-TTTTACTACTGATCAAAAGGGGAATGCAAGGTACTTGGAGTGTGTG 1155
|||| || | ||| |||| | | ||||||||||| |||||| |||||||||||||||||
Sbjct 1266 TGATTTGCAAGCCGTTTTCC-AGTGATCAAAAGGTGAATGCGAGGTACTTGGAGTGTGTT 1324
Query 1156 TGGAAAGTAGGAATTCAAGTGGAGGGTGAGCTAGAGAGAGGCGCAATCgagagagctgtg 1215
|||||| | || ||||||||||||||||| ||||| ||||| ||| |||||| |||||||
Sbjct 1325 TGGAAAATTGGGATTCAAGTGGAGGGTGATCTAGACAGAGGAGCAGTCGAGAAAGCTGTG 1384
Query 1216 aagaggttaatggtggatgaagaaggagaag-agatgaaga-gaagagCTCTAAGTTTAA 1273
|||||||||||||||| ||||||||| ||| |||||| || || ||| | | ||||| |
Sbjct 1385 CAGAGGTTAATGGTGGAGGAAGAAGGA-AAGGAGATGAGGAAGA-GAGTTGTCAGTTTGA 1442
Query 1274 AAGAGAAACTCAAAGCCTCTGTTTTA-GCTCAAGGTTCTTCACATAAATCACTAGA 1328
||||| |||| | |||||||||| || | | |||||||||||| || || |||||
Sbjct 1443 AAGAGCAACTTAGAGCCTCTGTTATAAG-TGGAGGTTCTTCACACAACTCGCTAGA 1497
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 50512865025
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5