BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G38040.1 Length=1350 Score E Sequences producing significant alignments: (Bits) Value Ahg494174 jgi|Araly1|494174|fgenesh2_kg.7__3607__AT5G38040.1 1799 0.0 Ahg948088 jgi|Araly1|948088|scaffold_704317.1 1230 0.0 Ahg494179 jgi|Araly1|494179|fgenesh2_kg.7__3612__AT5G37950.2 915 0.0 Ahg485040 jgi|Araly1|485040|fgenesh2_kg.5__1032__AT3G46670.1 732 0.0 > Ahg494174 jgi|Araly1|494174|fgenesh2_kg.7__3607__AT5G38040.1 Length=1329 Score = 1799 bits (974), Expect = 0.0 Identities = 1230/1351 (91%), Gaps = 27/1351 (2%) Strand=Plus/Plus Query 1 ATGGAGGAGAAGCTCT-CGAGGAGAAGAAGAG-TAGTGTTGGTTCCAGTTCCAGCTCAAG 58 ||||| ||||||| | ||||||||||||| | ||||||||||||||| ||||||||||| Sbjct 1 ATGGAAAAGAAGCT-TGCGAGGAGAAGAAG-GCTAGTGTTGGTTCCAGCTCCAGCTCAAG 58 Query 59 GACATATAACTCCAATGATACAACTTGCAAAAGCACTTCACTCAAAAGGCTTCTCTATTA 118 ||||||||| ||||||||| ||||| |||||| | ||| ||| ||| || |||||||||| Sbjct 59 GACATATAAATCCAATGATGCAACTCGCAAAAACCCTTTACTTAAAGGGTTTCTCTATTA 118 Query 119 CAGTTGTTCAAACCAAGTTCAACTACTTAAACCCTTCAAATGATTTGTCTGATTTTCAGT 178 |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 119 CAGTTGCTCAAACCAAGTTCAACTACTTAAACCCTTCAAGTGATTTGTCTGATTTTCAGT 178 Query 179 TTGTAACCATCCCAGAGAACTTACCAGTGTCTGATCTTAAGAATCTAGGACCAGGACGGT 238 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 179 TTGTAACCATCCCAGAGAACTTACCAGTGTCTGATCTTAAGAATCTTGGACCAGGACGGT 238 Query 239 TTCTGATTAAGCTAGCTAATGAGTGTTATGTTAGCTTTAAGGATTTGTTAGGTCAGTTGT 298 || |||||||||||||||| |||||||||||||||||||| || |||||||||||||| | Sbjct 239 TTTTGATTAAGCTAGCTAAAGAGTGTTATGTTAGCTTTAAAGAGTTGTTAGGTCAGTTAT 298 Query 299 TGGTTAATGAAGAAGAAGAGATCGCTTGTGTTATCTACGACGAGTTCATGTACTTTGTTG 358 |||||||| |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 299 TGGTTAAT------GAAGAGATCGCTTGTGTTATCTACGATGAGTTCATGTACTTTGTTG 352 Query 359 AAGTAGCAGTTAAAGAGTTTAAGCTTCGTAATGTTATTTTAAGTACTACAAGTGCAACGG 418 ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 353 AAGCAGCAGTTGAAGAGTTTAAGCTTCGTAATGTTATTTTAAGTACTACAAGTGCAACAG 412 Query 419 CTTTTGTTTGTCGCTTTGTTATGTGTGAACTCTATGCTAAAGATGGTTTGGCTCAACTTA 478 ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct 413 CTTTTGTTTGTCGCTTTGTTATGTGCAAACTCTATGCAAAAGATGGTTTGGCTCAACTT- 471 Query 479 AAGAAGGCGGTGAGCGAGAAGTGGAGTTAGTACCGGAGTTGTATCCTATACGGTACAAAG 538 | || || || | |||||||||||||||||| ||||||||||||||||||| Sbjct 472 -A-AA------GA---AG-A--GGAGTTAGTACCGGAGTTATATCCTATACGGTACAAAG 517 Query 539 ATTTACCAAGTTCGGTATTTGCATCTGTAGAATCTTCAGTGGAGTTGTTTAAGAATACAT 598 || |||||||||| |||||||| ||||| |||| ||| |||||||||||||||||||||| Sbjct 518 ATCTACCAAGTTCAGTATTTGCTTCTGTCGAATGTTCGGTGGAGTTGTTTAAGAATACAT 577 Query 599 GTTATAAAGGGACAGCTTCCTCTGTGATAATCAACACAGTGAGGTGTCTAGAGATGTCAT 658 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| Sbjct 578 GTTATAAAGGGACAGCTTCCTCTGTGATAATCAACACAGTTCGGTGTCTAGAGATCTCAT 637 Query 659 CTTTGGAGTGGCTTCAACAAGAACTTGAAATCCCGGTGTATTCTATAGGCCCGCTTCATA 718 ||||||| ||||||||||||||||| || || ||||||||| |||||||||| ||||| | Sbjct 638 CTTTGGATTGGCTTCAACAAGAACTAGATATTCCGGTGTATCCTATAGGCCCTCTTCACA 697 Query 719 TGGTGGTGTCAGCTCCTCCTACGAGTCTTTTAGAAGAGAACGAGAGCTGTATAGAATGGT 778 ||| ||| || ||||| | ||||||||||||||||||||| |||||||| ||||||||| Sbjct 698 TGGCGGTTTCTGCTCCGCGTACGAGTCTTTTAGAAGAGAATGAGAGCTGCATAGAATGGC 757 Query 779 TGAACAAACAAAAGCCGAGCTCGGTGATATACATAAGCTTGGGAAGTTTTACTTTGATGG 838 |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct 758 TGAACAAACAAAAGCCGAGCTCGGTGATATACATAAGCTTGGGAAGCTTTACTATGATGG 817 Query 839 AAACTAAAGAAATGTTGGAGATGGCTTATGGGTTTGTTAGTAGTAACCAACACTTCTTGT 898 ||||||||||| ||||||||||||||| ||||| | ||||||||||||||||||||||| Sbjct 818 AAACTAAAGAAGTGTTGGAGATGGCTTCGGGGTTGGATAGTAGTAACCAACACTTCTTGT 877 Query 899 GGGTGATTCGACCGGGATCTAT-ATGTGGTTCTGAAATCTCTGAGGAAGAGTTGTTGAAG 957 ||||||||||||| ||||| | | ||||||||||||||||||||||||||||||||||| Sbjct 878 GGGTGATTCGACCAGGATCCGTTA-GTGGTTCTGAAATCTCTGAGGAAGAGTTGTTGAAG 936 Query 958 AAGATGGTAATTACGGATCGAGGTTACATTGTGAAATGGGCGCCGCAAAAACAAGTGCTT 1017 |||||||||| ||| |||||||||||||| ||||||||||||||||| || ||||||||| Sbjct 937 AAGATGGTAACTACAGATCGAGGTTACATAGTGAAATGGGCGCCGCAGAAGCAAGTGCTT 996 Query 1018 GCACATTCTGCGGTTGGAGCGTTCTGGAGTCATTGTGGATGGAACTCGACTTTAGAAAGT 1077 |||||||| |||||| ||||||| ||||||||||| |||||||| |||||| ||||||| Sbjct 997 GCACATTCCGCGGTTAGAGCGTTTTGGAGTCATTGCGGATGGAATTCGACTCTAGAAAGC 1056 Query 1078 CTTGGTGAAGGAGTTCCATTGATATGTAGGCCTTTTACTACTGATCAAAAGGGGAATGCA 1137 || ||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||| Sbjct 1057 CTCGGTGAAGGAGTTCCAATGATATGTAGACCTTTTACAACTGATCAAAAGGGGAATGCA 1116 Query 1138 AGGTACTTGGAGTGTGTGTGGAAAGTAGGAATTCAAGTGGAGGGTGAGCTAGAGAGAGGC 1197 ||||||||||| ||||| ||||||||||| |||||||| ||||||||||||||||||||| Sbjct 1117 AGGTACTTGGAATGTGTATGGAAAGTAGGGATTCAAGTAGAGGGTGAGCTAGAGAGAGGC 1176 Query 1198 GCAATCgagagagctgtgaagaggttaatggtggatgaagaaggagaagagatgaagaga 1257 || |||| | ||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1177 GCGGTCGAAAAAGCTGTGAAGAGGTTAATGGTCGATGAAGAAGGAGAAGAGATGAAGAGA 1236 Query 1258 agagCTCTAAGTTTAAAAGAGAAACTCAAAGCCTCTGTTTTAGCTCAAGGTTCTTCACAT 1317 |||||||||| ||| |||||||||||||||| |||||||||||||||||| |||||| || Sbjct 1237 AGAGCTCTAAATTTGAAAGAGAAACTCAAAGACTCTGTTTTAGCTCAAGGCTCTTCATAT 1296 Query 1318 AAATCACTAGATGACTTCATCAAGACTCTGT 1348 || ||||| |||||||||||||||||||||| Sbjct 1297 AACTCACTTGATGACTTCATCAAGACTCTGT 1327 > Ahg948088 jgi|Araly1|948088|scaffold_704317.1 Length=1393 Score = 1230 bits (666), Expect = 0.0 Identities = 1142/1370 (83%), Gaps = 40/1370 (3%) Strand=Plus/Plus Query 1 ATGGAGGAGAAGCTCTCGAGGAGAAGAA-GAGTAGTGTTGGTTCCAGTTCCAGCTCAAGG 59 |||||||| |||| |||||| |||| || | |||||| |||||| |||||| ||||| Sbjct 23 ATGGAGGAAAAGCAAGAGAGGAGGAGAAGGA-TCGTGTTGATTCCAGCTCCAGCACAAGG 81 Query 60 ACATATAACTCCAATGATACAACTTGCAAAAGCACTTCACTCAAAAGGCTTCTCTATTAC 119 ||| ||| |||||||||| ||||| || | ||| ||||||| ||| || ||||| ||||| Sbjct 82 ACACATATCTCCAATGATGCAACTCGCGAGAGCCCTTCACTTAAAGGGTTTCTCCATTAC 141 Query 120 AGTTGTTCAAACCAAGTTCAACTACTTAAACCCTTCAAATGA-TTTGTCTGATTTTCAGT 178 |||| ||| ||||||||||| ||||| || |||||||| || || | |||||||||||| Sbjct 142 GGTTGCTCAGACCAAGTTCAATTACTTGAAGCCTTCAAAAGACTTAG-CTGATTTTCAGT 200 Query 179 TTGTAACCATCCCAGAGAACTTACCAGTGTCTGATCTTAAGAATCTAGGACCAGGACGGT 238 | | ||||||||||||| |||||||| || ||||| ||| ||||||| |||| ||| Sbjct 201 TCATCACCATCCCAGAGAGCTTACCAGCCTCGGATCTGAAGGATCTAGGGCCAGTTTGGT 260 Query 239 TTCTGATTAAGCT-AGCTAATGAGTGTTATGTTAGCTTTAAGGATTTG-TTAGGTCAGTT 296 |||| ||||| | | | || |||||| | |||||||| || || || || ||||| || Sbjct 261 TTCTTATTAAAATCAAC-AAAGAGTGTGAGGTTAGCTTCAA-GAAGTGTTTGGGTCAATT 318 Query 297 GTTGG-TTAATGAAGAAGAAGAGATCGCTTGTGTTATCTACGACGAGTTCATGTACTTTG 355 |||| || || ||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct 319 TTTGGCGCAA-CAACAAGAAGAGATCGCATGTGTCATCTACGACGAGTTCATGTACTTTG 377 Query 356 TTGAAG-TAGCAGTTAAAGAGTTTAAGCTTCGTAATGTTATTTTAAGTA-CTACAAGTGC 413 ||||| || ||| ||||||| ||| |||| || ||||||| |||| | | || ||| Sbjct 378 CTGAAGCTA-CAGCCAAAGAGTATAACCTTCCCAAAATTATTTTCAGTACCGA-AAATGC 435 Query 414 AACGGCTTTTGTTTGTCGCTTTGTTATGTGTGAACTCTATGCTAAAGATGGTTTGGCTCA 473 ||||||||||| |||||||| || ||||| |||||||||| |||||||| ||||||| Sbjct 436 AACGGCTTTTGCTTGTCGCTATGCCATGTGCAAACTCTATGCAAAAGATGGCTTGGCTCC 495 Query 474 ACTTAAAGAAGGCGGTGAGCGAGAAGTGGAGTTAGTACCGGAGTTGTAT--CCTATACGG 531 || |||||||| ||| |||||||| |||| |||| || |||||| || ||| || | Sbjct 496 CCTCAAAGAAGGATGTGGGCGAGAAGAGGAGCTAGTGCCAGAGTTGCATCCCCT-TA-GA 553 Query 532 TACAAAGATTTACCAAGTTCGGTATTTGCATCTGTAGAATCTTCAGTGG-AGTTGTTTAA 590 |||||||| |||||| ||| | ||||||| | |||||| | ||||||| || ||||||| Sbjct 554 TACAAAGACCTACCAACTTCAGCATTTGCACCAGTAGAAGCCTCAGTGGAAG-TGTTTAA 612 Query 591 GAA-TACATGTTATAAAGGGACAGCTTCCTCTGTGATAATCAACACAGTGAGGTGTCTAG 649 || | ||||| ||| ||| |||||||||||| ||||||||||||||||||| ||||||| Sbjct 613 -AAGTTCATGTGATATAGGCACAGCTTCCTCTATGATAATCAACACAGTGAGTTGTCTAG 671 Query 650 AGATGTCATCTTTGGAGTGGCTTCAACAAGAACTTGAAATCCCGGTGTATTCTATAGGCC 709 |||| ||||| ||||| |||||||||||||||||| |||| || | ||| ||||||||| Sbjct 672 AGATTTCATCCTTGGACTGGCTTCAACAAGAACTTAAAATTCCAATATATCCTATAGGCC 731 Query 710 CGCTTCATATGGTGG-TGTCAGCTCCTCCTACGAGTCTTTTAGAAGAGAACGAGAGCTGT 768 | ||||| ||| ||| | |||||||||||||| ||||| |||||||| | |||||||| Sbjct 732 CTCTTCACATGATGGCT-TCAGCTCCTCCTACAAGTCTAATAGAAGAGGATGAGAGCTGC 790 Query 769 ATAGAATGGTTGAACAAACAAAAGCCGAGCTCGGTGATATACATAAGCTTGGGAAGTTTT 828 ||||| ||| |||||||||||||||||||||||||||| |||||||| |||||||| ||| Sbjct 791 ATAGATTGGCTGAACAAACAAAAGCCGAGCTCGGTGATTTACATAAGTTTGGGAAGCTTT 850 Query 829 ACTTTGATGGAAACTAAAGAAATGTTGGAGATGGCTTATGGGTTTGTTAGTAGTAACCAA 888 ||||||||||||||||||||| ||||||| ||||||| ||||| ||||||||||||||| Sbjct 851 ACTTTGATGGAAACTAAAGAAGTGTTGGAAATGGCTTCGGGGTTGGTTAGTAGTAACCAA 910 Query 889 CACTTCTTGTGGGTGATTCGACC-GGGATCTATA-TGTGGTTCTGAAATCTCTGAGGAAG 946 |||||||||||||||||| |||| ||| || || | |||||||||| | ||| | || | Sbjct 911 CACTTCTTGTGGGTGATTAGACCCGGG-TCCATCCT-TGGTTCTGAATTGTCTAATGAGG 968 Query 947 AGTTGTTGAAG-AAGATGGTAAT-TACGGATCGAGGTTACATTGTGAAATGGGCGCCGCA 1004 |||| || | | ||||||| ||| | | |||||||| ||||||||||||||||| || || Sbjct 969 AGTTATTTA-GTAAGATGGAAATAT-CTGATCGAGGCTACATTGTGAAATGGGCTCCACA 1026 Query 1005 AAAACAAGTGCTTGCACATTCTGCGGTTGGAGCGTTCTGGAGTCATTGTGGATGGAACTC 1064 ||| ||||| ||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct 1027 AAAGCAAGTTCTTGCACATTCTGCGGTTGGAGCATTTTGGAGTCATTGTGGATGGAACTC 1086 Query 1065 GACTTTAGAAAGTCTTGG-TGAAGGAGTTCC-ATTGATATGTAGGCCTTTTACTACTGAT 1122 |||| |||| || | ||| |||||||||||| || ||| ||||||||||||||||||||| Sbjct 1087 GACTCTAGAGAG-CATGGGTGAAGGAGTTCCGAT-GATTTGTAGGCCTTTTACTACTGAT 1144 Query 1123 CAAAAGGGGAATGCAAGGTACTTGGAGTGTGTGTGGAAAGTAGGAATTCAAGTGGAGGGT 1182 ||||||| ||||| ||||| |||||||||| |||| ||| || |||| ||||||||| Sbjct 1145 CAAAAGGTAAATGCGCGGTACGTGGAGTGTGTCTGGAGAGTTGGGGTTCACGTGGAGGGT 1204 Query 1183 GAGCTAGAGAGAGGCGCAATCgagagagctgtgaagaggttaatggtggatgaagaagga 1242 |||||||||| ||| | | |||||||||||||||| |||||||||||||||||||||||| Sbjct 1205 GAGCTAGAGAAAGGAGTAGTCGAGAGAGCTGTGAAAAGGTTAATGGTGGATGAAGAAGGA 1264 Query 1243 gaagagatgaaga-gaagagCTCTAAGTTTAAAAGAGAAACTCAAA-GCCTCTGTTTTAG 1300 || |||||||||| || ||||||| ||||| ||||||||||||||| || ||||| || Sbjct 1265 GAGGAGATGAAGATGA-GAGCTCTCAGTTTGAAAGAGAAACTCAAATGC-TCTGTACTAC 1322 Query 1301 CTCAAGGTTCTTCACATAAATCACTAGATGACTTCATCAAGACTCTGTGA 1350 || ||||||||||||| | ||||| |||||||| ||||||||||| ||| Sbjct 1323 CTGAAGGTTCTTCACACGATTCACTGGATGACTTAATCAAGACTCTATGA 1372 > Ahg494179 jgi|Araly1|494179|fgenesh2_kg.7__3612__AT5G37950.2 Length=1053 Score = 915 bits (495), Expect = 0.0 Identities = 884/1069 (83%), Gaps = 38/1069 (4%) Strand=Plus/Plus Query 79 CAACTTGCAAAAGCACT-TCACTCAAAAGGCTTCTCTATTACAGTTGTTCAAACCAAGTT 137 |||||||| | ||| || | | | ||| || ||||| |||||||||| ||| || ||||| Sbjct 4 CAACTTGCGAGAGCCCTAT-ATTTAAAGGGTTTCTCCATTACAGTTGCTCAGACAAAGTT 62 Query 138 CAACTACTTAAACCCTTCAAATGATTTGTCTGATTTTCAGTTTGTAACCATCCCAGAGAA 197 ||| ||||||||||||||||| || ||| |||||||||||||| | ||||||||||||| Sbjct 63 CAATTACTTAAACCCTTCAAAAGACTTGGCTGATTTTCAGTTTATCACCATCCCAGAGAG 122 Query 198 CTTACCAGTGTCTGATCTT-AAGAATCTAGGACCAGGACGGTTTCTGATTAAGCT-AGCT 255 |||||||| || ||| || ||||||||||| |||| ||||||| ||||| | | | Sbjct 123 CTTACCAGCCTCGGAT-TTGAAGAATCTAGGGCCAGTTTGGTTTCTTATTAAAATCAAC- 180 Query 256 AATGAGTGTTATG-TTAGCTTTAAGGATTTG-TTAGGTCAGTTGTTGGTT--AATGAAGA 311 || |||||| | | ||||||| || || || || ||||||||||| ||| || || | Sbjct 181 AAAGAGTGTGA-GATTAGCTTCAA-GAAGTGTTTGGGTCAGTTGTT-GTTGCAA-CAACA 236 Query 312 AGAAGAGATCGCTTGTGTTATCTACGACGAGTTCATGTACTTTGTTGAAG-TAGCAGTTA 370 |||||||||||| ||||| ||||||||||||||||||||||||| ||||| | |||| | Sbjct 237 AGAAGAGATCGCATGTGTCATCTACGACGAGTTCATGTACTTTGCTGAAGCT-GCAGCCA 295 Query 371 AAGAGTTTAAGCTTCGTAATGTTATTTTAAGTA-CTACAAGTGCAACGGCTTTTGTTTGT 429 |||||||| | |||| || |||||||| |||| | | || |||||||||||||| || | Sbjct 296 AAGAGTTTGACCTTCCCAAAGTTATTTTCAGTACCGA-AAATGCAACGGCTTTTGCTTCT 354 Query 430 CGCTTTGTTATGTGTGAACTCTATGCTAAAGATGGTTTGGCTCAACTTAAAGAAGGCGGT 489 |||| || ||||| |||||||||| |||||||| ||||||| || |||||||| || Sbjct 355 CGCTCTGCCATGTGCAAACTCTATGCAAAAGATGGCTTGGCTCCTCTCAAAGAAGGATGT 414 Query 490 -G-AGCGAGAAGTGGAGTTAGTACCGGAGTTGTAT-CCTATACGGTACAAAGATTTACCA 546 | || ||| | |||| |||| || |||||| || ||| || |||||||||| ||||| Sbjct 415 GGAAGTGAG--GAGGAGCTAGTGCCAGAGTTGCATCCCT-TAAGGTACAAAGACCTACCA 471 Query 547 AGTTCGGTATTTGCATCTGTAGAATCTTCAGTGG-AGTTGTTTAAGAATACATGTTATAA 605 | ||| | ||||||| | |||||| | ||||||| || ||||||| ||| ||||| | || Sbjct 472 ACTTCAGCATTTGCACCAGTAGAAGCCTCAGTGGAAG-TGTTTAAAAATTCATGTGAGAA 530 Query 606 AGGGACAGCTTCCTCTGTGATAATCAACACAGTGAGGTGTCTAGAGATGTCATCTTTGGA 665 |||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||| Sbjct 531 AGGGACAGCTTCCTCTATGATAATCAACACAGTTCGGTGTCTAGAGATTTCATCTTTGGA 590 Query 666 GTGGCTTCAACAAGAACTTGAAATCCCGGTGTATTCTATAGGCCCGCTTCATATGGTGGT 725 |||||||||||||||||| |||| || | ||| || |||| || ||||| ||||| | Sbjct 591 GTGGCTTCAACAAGAACTCAAAATTCCAATATATCCTGTAGGACCTCTTCACATGGTT-T 649 Query 726 GT-CAGCTCCTCCTACGAGTCTTTTAGAAGAGAACGAGAGCTGTATAGAATGGTTGAACA 784 | ||||||||||||||||||| |||||||||| ||||| || ||||| ||| |||||| Sbjct 650 CTTCAGCTCCTCCTACGAGTCTACTAGAAGAGAATGAGAGTTGCATAGATTGGCTGAACA 709 Query 785 AACAAAAGCCGAGCTCGGTGATATACATAAGCTTGGGAAGTTTTACTTTGATGGAAACTA 844 |||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct 710 AACAAAAGCCAAGCTCAGTGATATACATAAGCTTGGGAAGCTTTACTTTGATGGAAACTA 769 Query 845 AAGAAATGTTGGAGATGGCTTATGGGTTTGTTAGTAGTAACCAACACTTCTTGTGGGTGA 904 ||||| ||||||| ||||||| |||||| ||||||||||||||| |||||||||||| || Sbjct 770 AAGAAGTGTTGGAAATGGCTTTTGGGTTGGTTAGTAGTAACCAATACTTCTTGTGGGCGA 829 Query 905 TTCGACCGGGATCTATATGT-GGTTCTGAAATCTCTGAGGAAGAGTTGTTGAAGAAG-AT 962 | ||||| || || ||| || ||||||||| | ||| | || || || || | | | || Sbjct 830 TCCGACCTGGCTCCATA-GTTGGTTCTGAATTATCTAATGAGGAATTATTTA-GTACTAT 887 Query 963 GGTAATTAC-GGATCGAGGTTACATTGTGAAATGGGCGCCGCAAAAACAAGTGCTTGCAC 1021 | ||| || ||||||||| ||||||||||||||||| ||||| |||||||||||||||| Sbjct 888 TGAAAT-ACCGGATCGAGGCTACATTGTGAAATGGGCTCCGCAGAAACAAGTGCTTGCAC 946 Query 1022 ATTCTGCGGTTGGAGCGTTCTGGAGTCATTGTGGATGGAACTCGACTTTAGAAAGTCTTG 1081 || ||||| || ||||||| |||||||||||||||||||||||||| |||| ||| | | Sbjct 947 ATCCTGCGATTCGAGCGTTTTGGAGTCATTGTGGATGGAACTCGACCCTAGAGAGTATGG 1006 Query 1082 GTGAAGG-AGTTCC-ATTGATATGTAGGCCTTTTACTACTGATCAAAAG 1128 | ||||| | |||| || ||| ||||||||||||||||||||||||||| Sbjct 1007 GGGAAGGGA-TTCCGAT-GATTTGTAGGCCTTTTACTACTGATCAAAAG 1053 > Ahg485040 jgi|Araly1|485040|fgenesh2_kg.5__1032__AT3G46670.1 Length=1588 Score = 732 bits (396), Expect = 0.0 Identities = 1066/1376 (77%), Gaps = 99/1376 (7%) Strand=Plus/Plus Query 1 ATGGAGGAGAAGCTC-TCGAGGAGAAGAAGAGTAGTGTTGGTTCCAGTTCCAGCTCAAGG 59 |||||||| |||| | |||||||||| | ||| |||| ||||||||||||||||||| Sbjct 173 ATGGAGGAAAAGC-CGGCGAGGAGAAG--G-GTATTGTTAATTCCAGTTCCAGCTCAAGG 228 Query 60 ACATATAACTCCAATGATACAACTTGCAAAAGCACTTCACTCAAAAGGCTTCTCTATTAC 119 ||||||| |||||||||| ||||| |||||| | ||| ||| ||| || ||||| || || Sbjct 229 ACATATATCTCCAATGATGCAACTCGCAAAAACCCTTTACTTAAAGGGTTTCTCAATCAC 288 Query 120 AGTTGTTCAAACCAAGTTCAACTACTTAAACCCTTCAAATGATTTGTCTGATTTTCAGTT 179 | ||| ||| |||||||| || || || | ||||||| |||| || ||||||||||||| Sbjct 289 AATTGCTCAGACCAAGTTTAATTATTTTAGCCCTTCAGATGACTTCACTGATTTTCAGTT 348 Query 180 TGTAACCATCCCAGAGAA-CTTACCAGTGTCTGATCTTAAGAATCTAGGACCAGGACG-G 237 ||| || || || || || |||||| | ||||||| |||||||||| || |||| | | | Sbjct 349 TGTCACTATTCCGGA-AAGCTTACCGGAGTCTGATTTTAAGAATCTCGGGCCAGTA-GAG 406 Query 238 TTTCTG-ATTAAGCT-AGCTAATGAGTGTTATGTTAGCTTTAAGGATTTG-TTAGGTCAG 294 ||| || | |||||| | | || |||||| | || |||||||| || || || |||||| Sbjct 407 TTTATGCA-TAAGCTCAAC-AAAGAGTGTCAGGTGAGCTTTAAAGA-CTGTTTGGGTCAG 463 Query 295 TTGTTGGTTAATG-AAGAA-G-AA-GAGATCGCTTGTGTTATCTACGACGAGTTCATGTA 350 ||||| | | | || || | || |||||||| ||||| |||| ||||||||| |||| Sbjct 464 TTGTT-G--CA-GCAACAAGGTAATGAGATCGCATGTGTCGTCTATGACGAGTTCGTGTA 519 Query 351 CTTTGTTGAAG-TAGCAGTTAAAGAGTTTAAGCTTCGTAATGTTATTTTAAGTACTACAA 409 ||||| ||||| || ||| ||||||| |||||||| || |||||||| || || |||| Sbjct 520 CTTTGCTGAAGCTA-CAGCCAAAGAGTATAAGCTTCCAAACGTTATTTTCAGCACAACAA 578 Query 410 GTGCAACGGCTTTTGTTTGTCGCTTTGTTATGT-G-TGAACTCTATGCTAAA-GATGGT- 465 |||| ||||||||||||||||||| || ||| | | |||||||||| ||| || || Sbjct 579 GTGCCACGGCTTTTGTTTGTCGCTCTG-TAT-TCGACAAACTCTATGC-AAACAAT-GTC 634 Query 466 TTGGCTCAACTT-AAAGAAGGC--GGTGAGCGAGAAGTGGAGTTAGTACCGGAGTTGT-A 521 ||| ||| ||| |||||| | | || | | || ||| |||| || ||||| | | Sbjct 635 TTGTCTC-CCTTGAAAGAACCCAAAG-GA-CAACAAAACGAGCTAGTGCCAGAGTT-TCA 690 Query 522 TCCTAT-ACGGTACAAAGA-TTTACCAAG-TTCGGTATT-TGCATC-TGTAGAATCT-TC 575 ||| | | | | |||||| ||| || | ||| ||| ||||| | ||||| | | Sbjct 691 TCCCCTGA-GATGCAAAGACTTT-CC-GGTTTC-ACATTGGGCATCAT-TAGAAAGTAT- 744 Query 576 AGTGGAGTTGTTTAAGAATACATGTT-ATAAAGGGACAGCTTCCTCTGTGATAATCAACA 634 | |||| ||| || ||||||| ||| | | | ||||||||||||||||||||||||||| Sbjct 745 AATGGAACTGTATAGGAATACA-GTTGACACACGGACAGCTTCCTCTGTGATAATCAACA 803 Query 635 CAGTGAGGTGTCTAGAGATG-TCATCTTTGGAGTGGCTT-CAACAAGAACTTGAAATCCC 692 | | ||| |||||||||| | |||||| || | || | |||||| | || |||| || Sbjct 804 CTGCGAGCTGTCTAGAGA-GCTCATCTCTGTC-TCGCCTGCAACAACAGCTAAAAATTCC 861 Query 693 GGTGTATTCTATAGGCCC-GCTTCATATGGTGGTGTCAGCTCCTCCTACGAGTCTT-TTA 750 ||||| |||||||||| | |||| |||||| || | | |||||| ||||| || Sbjct 862 AATGTATCCTATAGGCCCTG-TTCACCTGGTGGCCTC-GA-C-TCCTACAAGTCTGCTT- 916 Query 751 GAAGAGAACGAGAGCTGTATAGAATGGTTGAACAAACAAAAGCCGAGCTCGGTGATATAC 810 ||||||||| |||||||||| ||||||||||||||||||||| | || || |||| | Sbjct 917 GAAGAGAACAAGAGCTGTATCGAATGGTTGAACAAACAAAAGAAAAATTCTGTAATATTC 976 Query 811 ATAAGCTTGGGAAGTTTTA-CTTTGATGGAAACTAAA-GAAATGTTGGAGA-TGGCTTAT 867 ||||||||||||| || | |||||||||||| | || || || |||||| || ||| | Sbjct 977 GTAAGCTTGGGAAGCTT-AGCTTTGATGGAAA-TCAATGAGGTGATGGAGACTG-CTT-T 1032 Query 868 GGGTTTGT-TAGTAGTAACCAACACTTCTTGTGGGTGATTCGACCGGGATCTA-TATGTG 925 ||| ||| |||||| |||||||| ||||||||||||||||| || ||||| | || ||| Sbjct 1033 GGGATTGGATAGTAGCAACCAACAGTTCTTGTGGGTGATTCGGCCAGGATC-AGTACGTG 1091 Query 926 GTTCTGAAATCTCT-GAGGAAGAGTTGT-TGAAGAAGAT--G---G-TAATTACGGATCG 977 ||||| | || | ||| || ||| | ||| || | | | ||||| ||| ||| Sbjct 1092 GTTCT-ACATGGATAGAG-AAC--TTGCCT-AAGGAGTTTAGTAAGATAATTTCGGGTCG 1146 Query 978 AGGTTACATTGTGAAATGGGCGCCGCAAAAACAAGTGCTTGCACATTCTGCGGTTGGAGC 1037 |||||||||||||||||||| || || || |||| ||| | || |||| || |||| Sbjct 1147 GGGTTACATTGTGAAATGGGCTCCACAGAAGGAAGTACTTTCTCACCCTGCAGTAGGAGG 1206 Query 1038 GTTCTGGAGTCATTGTGGATGGAACTCGACTTTAGAAAGTCTT-GGTGAAGGAGTTCCAT 1096 ||| ||||| || ||||||||||||||||| |||| || | | || |||||||||||| Sbjct 1207 GTTTTGGAGCCACTGTGGATGGAACTCGACACTAGAGAG-CATCGGGGAAGGAGTTCCAA 1265 Query 1097 TGATATGTAGGCC-TTTTACTACTGATCAAAAGGGGAATGCAAGGTACTTGGAGTGTGTG 1155 |||| || | ||| |||| | | ||||||||||| |||||| ||||||||||||||||| Sbjct 1266 TGATTTGCAAGCCGTTTTCC-AGTGATCAAAAGGTGAATGCGAGGTACTTGGAGTGTGTT 1324 Query 1156 TGGAAAGTAGGAATTCAAGTGGAGGGTGAGCTAGAGAGAGGCGCAATCgagagagctgtg 1215 |||||| | || ||||||||||||||||| ||||| ||||| ||| |||||| ||||||| Sbjct 1325 TGGAAAATTGGGATTCAAGTGGAGGGTGATCTAGACAGAGGAGCAGTCGAGAAAGCTGTG 1384 Query 1216 aagaggttaatggtggatgaagaaggagaag-agatgaaga-gaagagCTCTAAGTTTAA 1273 |||||||||||||||| ||||||||| ||| |||||| || || ||| | | ||||| | Sbjct 1385 CAGAGGTTAATGGTGGAGGAAGAAGGA-AAGGAGATGAGGAAGA-GAGTTGTCAGTTTGA 1442 Query 1274 AAGAGAAACTCAAAGCCTCTGTTTTA-GCTCAAGGTTCTTCACATAAATCACTAGA 1328 ||||| |||| | |||||||||| || | | |||||||||||| || || ||||| Sbjct 1443 AAGAGCAACTTAGAGCCTCTGTTATAAG-TGGAGGTTCTTCACACAACTCGCTAGA 1497 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 50512865025 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5