BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G38850.1
Length=3294
Score E
Sequences producing significant alignments: (Bits) Value
Ahg914883 jgi|Araly1|914883|Al_scaffold_0001_5137 1120 0.0
Ahg907024 jgi|Araly1|907024|Al_scaffold_0002_105 843 0.0
Ahg891858 jgi|Araly1|891858|Al_scaffold_0007_3844 647 0.0
Ahg907021 jgi|Araly1|907021|Al_scaffold_0002_102 579 6e-164
Ahg493465 jgi|Araly1|493465|fgenesh2_kg.7__2898__AT4G14370.1 518 1e-145
Ahg891298 jgi|Araly1|891298|Al_scaffold_0007_3284 104 4e-21
Ahg915422 jgi|Araly1|915422|Al_scaffold_0008_173 60.2 9e-08
> Ahg914883 jgi|Araly1|914883|Al_scaffold_0001_5137
Length=3195
Score = 1120 bits (606), Expect = 0.0
Identities = 1944/2566 (76%), Gaps = 187/2566 (7%)
Strand=Plus/Plus
Query 53 AGATACAACGTCTTCCCGAGCTTCCATGGAG-GAGATATTCGTAAGA-CTTTTCTCTCTC 110
|||| |||| ||||| |||||||||| || | || | ||||| | | |||||| ||
Sbjct 37 AGATTCAACATCTTCTCGAGCTTCCACGG-GCCCGACGTCCGTAA-ATCATTTCTCAGTC 94
Query 111 ATTTACGTAAGCAGTTCAACTCA-AATGGGATTACAATGTTTGATGATCAAGGAATCGAG 169
| || || || ||||| |||| | || ||||| |||||||||||||||||||| || ||
Sbjct 95 ACTTGCGCAAACAGTTTAACT-ACAACGGGATCACAATGTTTGATGATCAAGGGATTGAA 153
Query 170 AGGAGCCAAACCATAGCCCCTGCTCTCATACAAGCGATTAGAGAATCTAGGATATCGATT 229
|| || | || || || ||| | |||||||||||||| |||||||| ||||| | ||||
Sbjct 154 AGAAGTGAGACAATCGCGCCTTCACTCATACAAGCGATAAGAGAATCGAGGATCTTGATT 213
Query 230 GTGGTTCTTTCAAAGAACTATGCTTCTTCGAGTTGGTGCTTGAATGAATTGGTGGAGATT 289
||| |||| |||| |||||||||||||| |||||||| |||||||||||||||||||||
Sbjct 214 GTGATTCTCTCAACTAACTATGCTTCTTCAAGTTGGTGTTTGAATGAATTGGTGGAGATT 273
Query 290 TTGAAATGC----AA---A---GAC-G-TAGTGATG-CCGATCTTCTATGAAGTAGATCC 336
|| | ||| || | ||| | |||||||| || || || || | ||| |||||
Sbjct 274 ATGGAGTGCAAGAAAGTTATGGGACAGATAGTGATGACC-ATATTTTACGGAGTGGATCC 332
Query 337 ATCCGATGTACGGAAACAGACCGGAGATTTTGGGAAGGCCTTCA---AAA-ATAGTTGTA 392
| || ||||| ||||||| | ||| ||||||||||| || |||| ||| || ||| |
Sbjct 333 AACCCATGTAAGGAAACAAATCGGCGATTTTGGGAAAGCTTTCAGTGAAACAT-GTTCT- 390
Query 393 AAAGTAAAACTAAGGAGGAGAGGCAGAGATGGATCCAAGCTTTAATTTTTGTTG-GCAAC 451
|||| || | | ||||| || || ||||| | ||||||| | | || || | |||
Sbjct 391 --CGTAATACCGATGTGGAGATGCGGAAATGGAGCAAAGCTTTGACTGATG-TGAGTAAC 447
Query 452 ATAGCT-GGAGAACACTCGCTGAAA-TGGGAAAATGAAGCGGATATGATTGAAAAGATAG 509
||| || |||||||||| || ||| ||||| |||||||| | ||||| |||||| | |
Sbjct 448 ATA-CTCGGAGAACACTTACT-AAACTGGGACAATGAAGCAAACATGATCGAAAAGGTTG 505
Query 510 CCA-AAGATGTTTC-AGATAAACTGAATGCTACACCTTCTAAAGATTTTG-ATG-CATTT 565
|| ||||||||| | ||||| ||||||||||| |||| ||||||| | | || |
Sbjct 506 -CAGGAGATGTTTCTCG-CAAACTAAATGCTACACCGTCTAGGGATTTTGCA-GACA-TG 561
Query 566 GTGGGACTTG-AGTTTCACATT--AGGGAATTAAGTTCTCTGCTATACCTAGA-C-T-AT 619
|||||||||| || ||| || || |||| |||| | | || | || | | | ||
Sbjct 562 GTGGGACTTGAAG-AACAC-TTGAAGAAAATTGAGTT-TTTATTACATTTAAATCATGAT 618
Query 620 GA-GCAAG-TGAGGATAGTAGGAATCTGTGGCCCTGCAGGAATCGGTAAGACTACCATTG 677
|| | || | | ||| || |||||||||||||||||||| || ||||||||||| ||||
Sbjct 619 GATG-GAGCT-ATGATTGTTGGAATCTGTGGCCCTGCAGGCATTGGTAAGACTACTATTG 676
Query 678 CTCGTGCTTTACAAAGCCTACTCTCTAGCAATTTTCAGCGAAGTTGTTTTATGGAGAATG 737
|| | |||||||| |||||||||||||| | |||||||| ||||||||||||||||||
Sbjct 677 CTAGAGCTTTACATAGCCTACTCTCTAGTAGTTTTCAGCTTAGTTGTTTTATGGAGAATC 736
Query 738 TTAGGGGAAGTCT-TAATATTGGGCTTGACGAGTATGG-TCTGAAGTTAGAT-T-TACAA 793
|||||||||| || ||||| ||| |||||||||||||| | | ||||| | | | |||||
Sbjct 737 TTAGGGGAAG-CTATAATAGTGGTCTTGACGAGTATGGAT-TAAAGTT-G-TGTCTACAA 792
Query 794 GAACGACTTCTTTCAAAGATTATGAACCAAAAGGGTATGAGGATAGAGCATTTAGGCACA 853
||| |||||||||||||||| | |||||||| ||||||||| || | |||||||| |
Sbjct 793 CAACAACTTCTTTCAAAGATTTTAAACCAAAACGGTATGAGGGTATACCATTTAGGTGCG 852
Query 854 ATAAGA-GATAGGTTACATGACCAAAAAGTGCTTATCATTCTAGATGATGTTAATGATC- 911
|| | | || ||| || || | |||||||||||||||||| |||||||| |||||||
Sbjct 853 AT-ACATGAAAGGCTATGCGATCGAAAAGTGCTTATCATTCTTGATGATGTGAATGATCT 911
Query 912 T-CG-A-TTTGTATGCTTTGGCTGATCAGACAACGTGGTTTGGTCCTGGAAGTAGGATTA 968
| | | || | | |||||||||||| | || | |||||||||||||||||| |||||||
Sbjct 912 TAAGCAGTTAG-AGGCTTTGGCTGATGAAACTAGGTGGTTTGGTCCTGGAAGCAGGATTA 970
Query 969 TCGTGACAACAGAAGA-CAACGAGCTTTTGCAGAAACATGATATTAACAATGTC-TACCA 1026
|||| || |||||||| ||| |||||||||||| | |||| ||| || ||| | |||||
Sbjct 971 TCGTAACCACAGAAGATCAA-GAGCTTTTGCAGCAGCATGGTATCAATAAT-ACATACCA 1028
Query 1027 TGTGGATTTTCCATCTAGAA-AAGA-AGCTCTTGAGATCTTTTGCAGATGTGCTTTTAGA 1084
|||| ||| ||||||| || || | ||||| ||||||| || |||| ||||||| ||
Sbjct 1029 GGTGGGTTTCCCATCTA-AAGAA-ATTTCTCTTAAGATCTTATGTAGATATGCTTTTCGA 1086
Query 1085 CAAAGCTCTGCACCTGATACGATTCT-AA-AGCTTGCA-GAACGAGTAACAGAGCTTTGT 1141
||||||| | ||| | || |||| | || |||||||| || || ||||| ||||||||
Sbjct 1087 CAAAGCTTTCCACATCAT-GGATT-TAAAGAGCTTGCATTAA-GACTAACAAAGCTTTGT 1143
Query 1142 GGTAATCTTCCATTGGGTCT-CTGTGTCATAGGTTCATCTTTACACGGGAA-AACTGAGG 1199
|||||||||||||||||||| | |||| | ||||| ||||||| ||||| || || |
Sbjct 1144 GGTAATCTTCCATTGGGTCTAC-GTGTGGTGGGTTCTTCTTTACGTGGGAAGAAG-GAAG 1201
Query 1200 ATGAGTGGGAA-ATTTTAAT-TCGCAGACTAGAAATTAGTCTTGATC---GAGATAACGA 1254
| || |||||| | | ||| | |||| ||||||| || |||||||| |||||| ||
Sbjct 1202 AGGAATGGGAAGAAGT-AATGT-GCAGGCTAGAAACTATTCTTGATCATCGAGATATTGA 1259
Query 1255 GGCACAACTTAGAGTTGGGTATGATAGCTTACATGAGAACGAGCAAGCTTTATTTCT-CA 1313
| | ||| |||||||| ||||| || ||||||||||| ||| || || ||||||| ||
Sbjct 1260 AGAAGTACTAAGAGTTGGATATGAGAGTTTACATGAGAATGAGAAATCTCTATTTCTTCA 1319
Query 1314 GCATTGCAGTCTTCTTCAACTATAAAGACCGTCAGCTTGTGA-TGGCCATGCTC-CTTGA 1371
|||||| ||||| || ||| ||||||| || | |||| | || | |||||| || ||
Sbjct 1320 -CATTGCGGTCTTTTTTAACCATAAAGATGGTGATATTGTTAATG-CAATGCTCGCT-GA 1376
Query 1372 CAGTAACCTAGATGTCGAGTATGGGTTAAGAACCCTCGCCAATAAATCTCTAATACATAT 1431
| |||| | ||| || | ||||||| |||| ||| | ||||||||||| ||| ||||
Sbjct 1377 AACTAACTTGGATATCAAACATGGGTTGAGAATCCTAGTAAATAAATCTCTCATATATAT 1436
Query 1432 ATCTAGGAAT-GAGAAAATAGTGATGCATAACTTACTACAACATGTGGGTAGACAAGCCA 1490
||||| || | |||| |||||||||| || ||||||||||| ||||||||||| | ||
Sbjct 1437 ATCTACTAAAAGGGAAA-TAGTGATGCACAAGTTACTACAACAAGTGGGTAGACAGGTCA 1495
Query 1491 TTCAAAGACAAGAACCTTGGAAACGCCACATCTTAATAGATGCTGACGAGATATGCAATG 1550
|||| |||||||| |||||||||||||| |||||||| ||||| | |||||||| |||
Sbjct 1496 TTCATAGACAAGAGCCTTGGAAACGCCAAATCTTAATTGATGCACATGAGATATGTGATG 1555
Query 1551 TCCTTGAAAATGATACAGATGCTAGAATTGTGTCAGGGATATCATTTGATATATCCAG-A 1609
|||||||||||||||||| | |||| |||||| || ||||||||||||| ||| || |
Sbjct 1556 TCCTTGAAAATGATACAGGTAATAGAGCTGTGTCCGGCATATCATTTGATACATC-AGGA 1614
Query 1610 ATCGGC-GAAGtttttttAAGCGAGAGAGCTTTTAAAAGATTGTGTAATCTCCAATTCCT 1668
|||| | |||||| | |||| || |||||| ||| |||| || ||||||| | ||| ||
Sbjct 1615 ATCG-CTGAAGTTATCATAAGTGATAGAGCTCTTAGAAGAATGAGTAATCTTCGATTTCT 1673
Query 1669 CAGGGTGTTTA-AGA-CTGGATATGATGaaaaaaaCAGAGTGCGCATACCGGAGAACATG 1726
|| |||||| | | | |||| ||| || | ||||||| |||||| ||| | ||
Sbjct 1674 TAG--TGTTTACAAAACAAGATACAATGGGAATGATAGAGTGCACATACCTGAGGAGATA 1731
Query 1727 GAGTTTCCACCTCGTCTAAGGTTACTACAGTGGGAAGCATATCCGAGGA-GAAGTCTTTC 1785
||||||||||||||| | |||||||| || |||| ||||| |||| | || ||||| |
Sbjct 1732 GAGTTTCCACCTCGTTTGAGGTTACTGCATTGGGTGGCATACCCGAAAAAGA-GTCTTCC 1790
Query 1786 TCTTAAACTTAACCT-GGAATATCTTGTCGAACTTGATATG-GAAGG-TAGCCTGCTCGA 1842
|||| | || || |||| ||||||| || ||| | ||| | || ||||| ||||||
Sbjct 1791 ACTTAGA-TTCTGCTTGGAAAATCTTGTTGAGCTTTACATGCG--GGATAGCCAGCTCGA 1847
Query 1843 GAAGCTATGGGATGGAACTCAGCCCCTTGCAAATCTCAAGAAGATGTCTTTGTCAA-GTT 1901
|||||| ||||| ||| ||||||| || ||||||||||||||||| ||| ||| ||
Sbjct 1848 GAAGCTTTGGGAAGGAGCTCAGCCGCTAACAAATCTCAAGAAGATGGATTTTTCATCGT- 1906
Query 1902 CATGGTAT-TTAAA-GAAACTTCCGGATCTGTCAAATGCTACAAATCTCGAAGA-ATTGG 1958
| | | | ||||| ||| || || ||||| ||||||||||||||| | ||||| ||||
Sbjct 1907 C-TCGAAAGTTAAAAGAA-CTCCCAGATCTTTCAAATGCTACAAATTT-GAAGAGATTGC 1963
Query 1959 ATCTGAGA-GCTTGCCAGAA-TTTAGTAGAGCTTCCTTCCTCCTTTT-CTTATCTGCATA 2015
| || | | | |||| | || ||| || || |||| || | | || | |||| ||||
Sbjct 1964 AACTAA-ATGGTTGC-ACAAGTTTGGTCGAAATTCCGTCAAC-TATTGCAAATCTTCATA 2020
Query 2016 AGCTA-AAGTATTTGAAT-ATGA-TGGGATGCAG-AAGGCTAAAAGAAGTTCCACCTCAT 2071
| ||| ||| | ||| | |||| | ||| | || ||| ||| |||||| ||||
Sbjct 2021 AACTAGAAG-ACTTGG-TGATGAATTCT-TGC-GTAAATCTAGAAGTTGTTCCAACTCAC 2076
Query 2072 ATCAACTT-GAAGTCTCTTGA-ATTGG-TCAACATGTAT-GGATGCTCAAGATTAAAAA- 2126
|||||||| | | |||||||| | || || ||||| || ||||||||| || ||| ||
Sbjct 2077 ATCAACTTAGCA-TCTCTTGAGA--GGATCTACATG-ATTGGATGCTCACGACTAAGAAC 2132
Query 2127 GCTTTCCAGATATTTCTACAAACATCAGTTCA-CT-CGACATATCATACACTGATGTGGA 2184
| ||||||||||| ||||||||||| || || || | || ||| | || | || ||
Sbjct 2133 G-TTTCCAGATATGTCTACAAACATTAGC-CAACTTCTT-ATGTCAGAAACAGCGGTAGA 2189
Query 2185 AGAACTACCTGAATCAATGACGATGTGGTCTCGCCTA-CGTACTCTCGAAATATACAAA- 2242
| || | |||| ||| || | | | |||||||| || | || | | || ||| | |
Sbjct 2190 AAAAGTGCCTGCATCGATTAGGCTATGGTCTCGTCTTTCCTA-TGTTGATATA-AGAGGC 2247
Query 2243 AGTAGAAACCTCAAGATAGTAACACATGTGCCCCT-AAA-CCTAACATATCTAGACCTCA 2300
||| |||| || |||| |||||||| | ||| | ||| |||| | ||| ||||| |
Sbjct 2248 AGTGGAAATCTGAAGACCTTAACACATTT-CCC-TGAAAGCCTATGGTCTCTGGACCTAA 2305
Query 2301 GCGAGACTAGA-ATTGAGAAGATTCCAGAT-GACATCAAAAATGTTCATGGGCTGCAAAT 2358
|| | ||| || ||||||||||||||| || | ||||||| | | ||| || ||||
Sbjct 2306 GCTATACT-GATATTGAGAAGATTCCATATTG-CATCAAACGTATCCATCACCTACAAAG 2363
Query 2359 T-TT-ATTTCTA-GGTGGCTGCAGAAAACTCGCATCATTGCCAGAGCTTCCTGGTTCGCT 2415
|| | | | || || ||||||||||||||||| ||||| ||||||||| ||||||
Sbjct 2364 CCTTGAAGTA-ACGG-GG-TGCAGAAAACTCGCATCTTTGCCTGAGCTTCCTTCTTCGCT 2420
Query 2416 CTTGTACTTATCA-G-CA-AACGAGTGTGAATCACTTG-AGAGCGTATCTTGCCCTTTTA 2471
| | |||| | | | || || || ||| ||||| ||| ||| |||| ||| |||| | |
Sbjct 2421 CA-G-ACTTTTAATGGCAGAA-GATTGTAAATCA-TTGGAGAACGTAACTTCCCCTCT-A 2475
Query 2472 ATA-CTTCATACATG-GAA-CTCAGCTTCACCAACTGCTTCAAACT 2514
| | || || | ||| ||| |||| ||||||||||| || |||||
Sbjct 2476 AGAACTCCA-A-ATGCGAAACTCAATTTCACCAACTGTTTTAAACT 2519
> Ahg907024 jgi|Araly1|907024|Al_scaffold_0002_105
Length=3279
Score = 843 bits (456), Expect = 0.0
Identities = 1940/2632 (74%), Gaps = 200/2632 (8%)
Strand=Plus/Plus
Query 58 CAACGTCTTCCCGAGCTTCCATGGAG-GAGATATTCGTAAGACTTTTCTCTCTCATTTAC 116
||| |||||| |||||||||| || | || | ||||| || ||||| ||| | |
Sbjct 51 CAATGTCTTCGCGAGCTTCCACGG-GCCTGACGTCCGTAAAACACTTCTCAGTCACATGC 109
Query 117 GTAAGCAGTTCAA-CTCAAATGGGATTACAATGTTTGATGAT-CAAGGAATCGAGAGGAG 174
|||| ||||| || | | || ||||| || ||||| |||||| || | || ||||| ||
Sbjct 110 GTAAACAGTTTAACCGC-AACGGGATCACTATGTTCGATGATGAAAAG-ATTGAGAGAAG 167
Query 175 -CCAAACCATAGCCCCTGCTCTCATAC-AAGCG-ATTAGAGAATCTAGGATATCGATTGT 231
| ||| || |||||| ||||||| | || | || || || || ||||| ||||| ||
Sbjct 168 TGC-AACGATCGCCCCTTCTCTCAT-CGGAG-GTATAAGGGATTCAAGGATCTCGATCGT 224
Query 232 GGTTCTTTCAAAGAACTATGCTTCTTCGAGTTGGTGCTTGAATGAATTGGTGGAGATTTT 291
| |||| || ||||| ||||||||||| || ||||| ||| |||||||||||||||| ||
Sbjct 225 GATTCTCTCTAAGAAATATGCTTCTTCAAGCTGGTGTTTGGATGAATTGGTGGAGATATT 284
Query 292 GAAATGC----AA---A---GAC--GTAGTGATG-CCGATCTTCTATGAAGTAGATCCAT 338
| | ||| || | ||| |||||||| || |||||||| | || ||||| |
Sbjct 285 GGAGTGCAAAAAAGTTATGGGACAAATAGTGATGACC-ATCTTCTACGGAGCGGATCCTT 343
Query 339 CCGATGTACGGAAACAGACCGGAGATTTTGGGAAGGCCTTC-AAAAATAGTTGTAAAAGT 397
| ||||| |||||||||| |||||| || |||| || ||| | || | |||| | ||
Sbjct 344 CTGATGTGCGGAAACAGATCGGAGAATTCGGGATCGCTTTCGATGAA-ACTTGTGCACGT 402
Query 398 AAAACTAAGGAGGAGAGGCAGAGATGGA-TCCAAGCTTT-AATTTTTGTTGGCAACATAG 455
|| || | ||||| ||| | | ||||| | ||||||| || | || ||||| || |
Sbjct 403 AAGACGGACGAGGAAAGGAAAAAATGGAGT-GAAGCTTTGAA-TGAAGTGGGCAATATTG 460
Query 456 CTGGAGAACAC-TC-GCTGAAATGGGAAAATGAAGCGGATATGATTGAA-AAGATAGCCA 512
|||||||| || || | | |||||| |||||||| |||||| | || ||||| |||
Sbjct 461 CTGGAGAAGACTTCAACCG--ATGGGACAATGAAGCAAATATGA-TCAAGAAGATTGCCG 517
Query 513 AAGATGTTTCAGATAAACTGAATGCTACACCTTCTAAAGATTTT-GATGCATTTG-TGGG 570
||||||||||||||||||||||||||||||| || || | |||| |||| | || ||||
Sbjct 518 AAGATGTTTCAGATAAACTGAATGCTACACCGTC-AAGGGTTTTTGATGG-TATGGTGGG 575
Query 571 ACTTGA-GTTTCACATT-AGGGAATTA-AGTTCTCTGCTATACCTAGACTA-TGA-GCAA 625
|||| | | ||| || ||| || | ||| || ||||| | |||| || ||| | ||
Sbjct 576 ACTT-ACGGCTCAT-TTGAGGAAAATGGAGT-CTTTGCTAGATTTAGA-TAATGATG-AA 630
Query 626 GTGAGGATAGTAGGAATCTGTGGCCCTGCAGGAATCGGTAAGACTACCATTGCTCGTGCT 685
|| | ||| || | |||| ||| |||||||| || ||||||||||| ||||| | |||
Sbjct 631 GTTAAGATGGTTGCAATCACTGGTCCTGCAGGGATTGGTAAGACTACAATTGCGAGAGCT 690
Query 686 TTACAAAGC-CTACTCTCTAGCAATTTTCAGCGAAGTTGTTTTATGGAGAATGTTAGGGG 744
||||||| | |||||||||| || ||||||| | ||||||| |||| || |||||||
Sbjct 691 TTACAAA-CTCTACTCTCTAATAAGTTTCAGCTTACTTGTTTTGTGGACAACCTTAGGGG 749
Query 745 AAG-TCTTAATATTGGGCTTGACGAGTATGGTCTGAAGTTAGATTTACAAGAACGACTTC 803
||| | ||| || ||| ||||| | | ||| | ||| | |||||||| | |||
Sbjct 750 AAGCTATTA-TAATGGTCTTGATG--T--GGT--GC-GTT---T--ACAAGAACAATTTC 796
Query 804 TTTCAAAGATTATGAACCAAAAGGGTATGAGGATAGAGC-ATTTAGGCACAATAAGA-GA 861
| ||||| || |||||||| | ||| | |||||| || ||| ||| ||| || ||
Sbjct 797 TCTCAAATCTTTTGAACCAAGATGGTCTTAGGATAC-GCCATTCCGGCGTGATA-GAAGA 854
Query 862 TAGGTTA--CATGACCAAAAAGTGCTTATCATTCTAGATGATGTTAATGATCTC--G-AT 916
||| || || | | | | ||| || |||||||| |||||||| || || | | |
Sbjct 855 AAGGCTATGCAAG-C-AGAGAGTCCTCATCATTCTCGATGATGTGAACAATATAAAGCAA 912
Query 917 TTGTATG-CTTTGGCTGATCAGACAACGTGGTTTGGTCCTGGAAGTAGGATTATCGTGAC 975
|| ||| | ||||| || | || || |||||||||||||||||||||||| | || ||
Sbjct 913 TTA-ATGGCGTTGGCAAATGAAACTACATGGTTTGGTCCTGGAAGTAGGATTGTAGTTAC 971
Query 976 AACAGAAGACAACGAGCTTTTGCAGAAACATGATATTAACAATGTCTACCATGTGGATTT 1035
|||||| |||| |||||||||||| |||||| ||| | ||| | ||| |||||| ||
Sbjct 972 CACAGAAAACAAAGAGCTTTTGCAGCAACATGGTATCGATAATATATACTATGTGGGGTT 1031
Query 1036 TCCATCTAGAA-AAGAAGCTCTTGAGATCTTTTGCAGATGTGCTTTTAGACAAAGCTCTG 1094
||||||| || |||||||| | ||||||| || | || |||||||||| ||| ||||
Sbjct 1032 TCCATCT-GATGAAGAAGCTGTCAAGATCTTATGTAAATATGCTTTTAGAAAAAACTCT- 1089
Query 1095 CACCTGAT-ACGATTCTAAA--GCTTGC-AGAACGAGTAACAGAGCTTTGTGGTAATCTT 1150
| | || | | || |||| |||||| | || |||||| |||||||||| ||||||||
Sbjct 1090 CTT-T-ATCATGGTTTTAAAAAGCTTGCTAAAA-GAGTAATAGAGCTTTGTTGTAATCTT 1146
Query 1151 CCATTGGGTCTCTGTGTCATAGGTTCATCTTTACACGGGAA-AACTGAGGATGAGTGGGA 1209
||||||||||||||||| | ||||||||||||| || || || |||||| ||||||||
Sbjct 1147 CCATTGGGTCTCTGTGTGGTGGGTTCATCTTTACGTGGTAAGAA-TGAGGAGGAGTGGGA 1205
Query 1210 A-ATTTTAATTCGCA-GACTAGAAATTAGTCTTGATCGAGATAACGAGGCACAACTTAGA 1267
| | | ||| | || | ||||||| || |||| ||| ||||| ||||| | ||| |||
Sbjct 1206 ACAAGT-AATACACAAG-CTAGAAACTAATCTTAATCAAGATATCGAGGAAGTACTAAGA 1263
Query 1268 GTTGGGTATGATAGCTTACATGAGAACGAGCAAGCTTTATTTCTC-AGCATTGCAGTCTT 1326
||||| ||||| || ||| ||||||| |||||| || | |||||| | |||||||||||
Sbjct 1264 GTTGGTTATGAGAGTTTAGATGAGAATGAGCAATCTCTGTTTCTCCAT-ATTGCAGTCTT 1322
Query 1327 CTTCAACTATAAAGACCGTCAGCTTGTGATGGCCATGCTC-CTTGACAGTAACCTAGATG 1385
||||||| ||||||| || | ||||||| ||||| || || || ||| || | ||||
Sbjct 1323 CTTCAACCATAAAGATGGTGATCTTGTGAAAACCATGTTCGCT-GAGAGTGACTTGGATG 1381
Query 1386 TCGAGTATGGGTT-AAGAACCCTCGCCAATAAATCTCTAATACATATATCTAGGAATGA- 1443
|| | || || || || || ||| | || | |||||| || | ||||||| | | ||
Sbjct 1382 TCAAATACGGATTGAA-AATCCTTGTAAACAGATCTCTCGTAGAGATATCTACGTACGAT 1440
Query 1444 G-AA-AATAGTGATGCATA-ACTTACTACAACATGTGGGTAGACAAGCCATTCA-AAGAC 1499
| || |||||||||||| | | ||||||||||| ||||||| | |||| ||||| || ||
Sbjct 1441 GGAAGAATAGTGATGCACAGA-TTACTACAACAAGTGGGTAAAAAAGCTATTCATAA-AC 1498
Query 1500 AAGAACCTTGGAAACGCCACATCTTAATAGATGCTG-ACGAGATATGCAATGTCCTTGAA 1558
|||| |||||||||||| | |||||| |||||||| | || || || |||| ||||||
Sbjct 1499 AAGAGCCTTGGAAACGCAAGATCTTATTAGATGCTCCA-GACATTTGTGATGTTCTTGAA 1557
Query 1559 AATGATACAGATGCTAGAATTGTGTCAGGGATATCATTTGATATATCCAGAATCGGCGAA 1618
|| |||| | ||||| | |||| || ||||||||||||||||| | ||| |||
Sbjct 1558 CGTGCCACAGGTACTAGAGCTATGTCCGGCATATCATTTGATATATCTGGTATCAATGAA 1617
Query 1619 GtttttttAAGCGAGAGAG-CTTTTAAAAGATTGTGTAATCTCCAATTCCTCAGGGTGTT 1677
|| | | ||||| ||| || ||||| ||||| || |||||| | ||||||||| || |
Sbjct 1618 GTATCTATAAGCAAGA-AGGCTTTTCAAAGAATGCCTAATCTTCGATTCCTCAGAGTCTA 1676
Query 1678 TAAGACTGGA-TATGATGaaaaaaaCAGAGTGCGCATACCGGAGAACATGGAGTTTCCAC 1736
||| | | || | ||||| || | ||||||| ||||| ||| ||||||||||| |
Sbjct 1677 TAAAAGTAGAGT-TGATGGCAATGATAGAGTGCATATACCTGAGGGGATGGAGTTTCC-C 1734
Query 1737 CTC-GTCTAAGGTTACTACAGTGGGAAGCA-TATCCGAGGA-GAAGTCTTTC-TCTTAAA 1792
| | |||||||||||||| | ||||| | | || || || | || ||||| | || | |
Sbjct 1735 CACCGTCTAAGGTTACTAGATTGGGAGG-AGTACCCAAGAAAGA-GTCTT-CATCCCACA 1791
Query 1793 CTTAA-CCTGGAATATCTTGTCGAACTTGATAT-G-GAAGGTAGCCTGCTCGAGAAGCTA 1849
|| | |||| |||||||||||||||| || | | ||| |||| ||||||||||||
Sbjct 1792 TTTCATCCTG-AATATCTTGTCGAACTCAATTTTGAGAA--TAGCAAGCTCGAGAAGCTT 1848
Query 1850 TGGGATGGAACTCAGCCCCTTGCAAATCTCAAGAAGATGTCTTTGTCAA-GTTCATGGTA 1908
||||| |||| || |||| ||||||||||||||||| |||| || || | || |
Sbjct 1849 TGGGAAGGAAGAGAGGTCCTTACAAATCTCAAGAAGATGAATTTGGCATTGTCCC-GGAA 1907
Query 1909 TTTAAAGAAACTTCCGGATCTGT-CAAATGCTACAAATCTCGAAGAATTG-GATCTGAGA 1966
||| |||||||| || ||||| | | ||||||||||||| || |||||| | ||| |
Sbjct 1908 TTTGAAGAAACTCCCAGATCT-TACGTATGCTACAAATCTGGAGGAATTGAG-TCTTTTA 1965
Query 1967 -GCTTGCCAGAATTTAGTAGAGCTTCCTTCCTCCTTTTCTTATCTGCATAAGCTAAAGTA 2025
||| || ||| ||| | || | |||| ||||| ||||| |||| ||||| || | ||
Sbjct 1966 CGCT-GCGAGAGTTTGGAAGCGATTCCATCCTCTTTTTCGCATCTTCATAAACTGCA-TA 2023
Query 2026 T-TTGAAT-ATGA-TGGGATGCAGAAGGCTAAAAGA-AGTTCCACCTCATATCAACTTGA 2081
|| | | |||| | | |||| || ||| ||| | ||||| |||| || ||||||
Sbjct 2024 GGTT-ATTGATGAATAGC-TGCATAAACCTACAAGTCA-TTCCAGCTCACATGAACTTGG 2080
Query 2082 -AGTCTCTTGAATTGGTCAACATGT-ATGGATGCTCAAGATTAA-AAAGCTTTCCAGATA 2138
| || |||||| ||| |||| | ||||||||||| || | ||| || ||| ||
Sbjct 2081 CA-TCCCTTGAACAAGTCTCCATGGCA-GGATGCTCAAGTTTGAGAAATATT-CCACTTA 2137
Query 2139 TTTCTACAAACATCAGTTCA-C-TCGACATATCATACACTGATGTGGAAGAACTA-CCTG 2195
| || || ||||| | || | || | || ||| |||| || |||||| | || || |
Sbjct 2138 TGTCAACGAACATTAC--CAACCTCTATATCTCAGACACAGAGGTGGAATA-CTTGCCCG 2194
Query 2196 AATCAAT-GACGATGTGGTCTCGCCT--ACGTACTCTCGAAATATACAA-AAGTAGAAAC 2251
|||||| | | | || ||||| || | || |||| | ||| |||| || |||||||
Sbjct 2195 CATCAATTGG-GCTTTGCTCTCGTCTTGA-GTT-TCTCCATATA-ACAAGAAATAGAAAC 2250
Query 2252 CTCAAGATAGTAACACATGTGCCCCTAA-ACCT-AACAT-ATCTAGACCTCAGCGAG-AC 2307
||||| | || ||||| | |||| | | | || | | ||| |||| || | | ||
Sbjct 2251 TTCAAGGGATTATCACATCT-CCCC-ACGAGTTTAAGAACA-CTAAACCTAAGGG-GTAC 2306
Query 2308 TAGA-ATTGAGAAG-ATTCCAGAT-GACATCAAAAATGTTCATGGGCT-GCAAATT-TT- 2361
| || ||||| ||| ||||||||| | ||||||| || ||||| |||| | ||| ||
Sbjct 2307 T-GATATTGA-AAGGATTCCAGATTG-CATCAAAGATCTTCATCGGCTAG-AAACCCTTG 2362
Query 2362 ATTTCTAGGTGGCTGCAGAAAACTCGCATCATTGCCAGAGCTTCCTGGTTCGCTCTTGTA 2421
|| ||| || |||||||||||||||||||| |||||||| |||||||||||| ||
Sbjct 2363 AT--CTATCTGAATGCAGAAAACTCGCATCATTACCAGAGCTCCCTGGTTCGCTCA-GTT 2419
Query 2422 CT-TA-TCAGCAA-ACGAGTGTGAATCACTTGAGAGCGTATCTTGCCCTTTTAATACTTC 2478
| || | |||| | || ||||||||||| |||| ||||| ||||||| | || ||| |
Sbjct 2420 CCCTAATG-GCAAGA-GACTGTGAATCACTAGAGACCGTATTTTGCCCTATGAACACTCC 2477
Query 2479 ATACATG-GAACTCAGCTT-CACCAACTGCTTCAAACTAAACCAAGAAGCACGCAGAGGA 2536
| | | | | | || | || |||||||||||||||| | |||| |||||| |||| |
Sbjct 2478 AAATACGCGCA-TC-GATTTCACCAACTGCTTCAAATTGTGCCAACAAGCACAAAGAGCA 2535
Query 2537 ATTATTCAACAATCATTTT--CTCATGGGTGGGCATCCTTACCTGGAAGAGA 2586
| ||| |||||||| |||| ||| | | | || || ||||| ||||||||
Sbjct 2536 AGTATCCAACAATCGTTTTTTCTCGTAGACGCGC-TC-TTACCAGGAAGAGA 2585
> Ahg891858 jgi|Araly1|891858|Al_scaffold_0007_3844
Length=1020
Score = 647 bits (350), Expect = 0.0
Identities = 430/468 (92%), Gaps = 7/468 (1%)
Strand=Plus/Plus
Query 741 GGGGAAGTCTTAAT-ATTGGGCTTGACGAGTATGGTCTGAAGTTAGATTTACAAGAACGA 799
|||||||||||||| | |||||||||||||||||||||||| || |||||||||||||||
Sbjct 392 GGGGAAGTCTTAATCA-TGGGCTTGACGAGTATGGTCTGAAATTGGATTTACAAGAACGA 450
Query 800 CTTCTTTCAAAGATTATGAACCAAAAGGGTATGAGGATAGAGCATTTAGGCACAATAAGA 859
||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 451 CTTCTTTCAAAGATTCTGAACCAAAAGGGTATGAGGATAAAGCATTTAGGCGCAATAAGA 510
Query 860 GATAGGTTACATGACCAAAAAGTGCTTATCATTCTAGATGATGTTAATGATCTC---GAT 916
||||||||||||||||||||||||||||||||||| |||| ||| ||||||||| ||
Sbjct 511 GATAGGTTACATGACCAAAAAGTGCTTATCATTCTCGATGGTGTGAATGATCTCGAAGAA 570
Query 917 TTGTATGCTTTGGCTGATCAGACAACGTGGTTTGGTCCTGGAAGTAGGATTATCGTGACA 976
||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |
Sbjct 571 TTGTATGCTTTGGCTAATCAGACAATATGGTTTGGTCCTGGAAGTAGGATTATCGTGGTA 630
Query 977 ACAGAAGACAACGAGCTTTTGCAGAAACATGATATTAACAATGTCTACCATGTGGATTTT 1036
| |||||| || ||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 631 ATAGAAGATAAAGAGATTTTGCAGAAACATGGTATTAACAATGTCTACCATGTGGATTTT 690
Query 1037 CCATCTAGAAAAGAAGCTCTTGAGATCTTTTGCAGATGTGCTTTTAGACAAAGCTCTGCA 1096
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 691 CCATCTAGAGAAGAAGCTCTTGAGATCTTTTGCAGATGTGCTTTTAGACAAAGCTCTCCA 750
Query 1097 CCTGATACGATTCTAAAGCTTGCAGAACGAGTAACAGAGCTTTGTGGTAATCTTCCATTG 1156
||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 751 CCTTATGGGCTTCTAAAGCTTGCAGAACGAGTAACAGAGCTTTGTGGTAATCTTCCATTG 810
Query 1157 GGTCT-CTGTGTCATAGGTTCATCTTTACACGGGAAAACTGAGGATGA 1203
||||| | ||||||||||||||| ||| | ||||| ||| |||||||
Sbjct 811 GGTCTTC-GTGTCATAGGTTCATATTTGCGTGGGAAGACTAAGGATGA 857
Score = 379 bits (205), Expect = 6e-104
Identities = 294/336 (88%), Gaps = 10/336 (3%)
Strand=Plus/Plus
Query 333 ATCCATCCGATGTACGGAAACAGACCGGAGATTTTGGGAAGGCCTTCAAAAA-TAGTTGT 391
||||||| ||||||||||||||||||||||||||||||| ||||| |||||| | |||||
Sbjct 62 ATCCATCTGATGTACGGAAACAGACCGGAGATTTTGGGAGGGCCTACAAAAAAT-GTTGT 120
Query 392 AAAAGTAAAACTAAGGAGGAGAGGCAGAGATGGATCCAAGCTTTAATTTTTGTTGGCAAC 451
|||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||
Sbjct 121 GCAAGTAAAACTAAGGAGGAGAGGCAGAGATGAATCCAAGCTTTAATTGTTGTGGGCAAC 180
Query 452 ATAGCTGGAGAACACTCGCTGAAA-TGGGAAAATGAAGCGGATATGATTGAAAAGATAGC 510
|||||||||||| ||| ||| ||| |||||||||||||||||||||||||||||||||||
Sbjct 181 ATAGCTGGAGAAAACTTGCT-AAACTGGGAAAATGAAGCGGATATGATTGAAAAGATAGC 239
Query 511 CAAAGATGTTTCAG-ATAAACTGAATGCTACACCTTCTAAAGATTTTGATGC-ATTTGTG 568
||||||| || || | ||||| ||| ||||||| |||| |||||||||| || |||
Sbjct 240 CAAAGATACTT-AGGAGAAACTAAATACTACACCCTCTAGGGATTTTGATGGGATA-GTG 297
Query 569 GGACTTGA-GTTTCACATTAGGGAATTAAGTTCTCTGCTATACCTAGACTATGAGCAAGT 627
|||||| | ||| ||||| | ||||||||||||||||| ||||||||||| ||| |||||
Sbjct 298 GGACTTAAAGTT-CACATAAAGGAATTAAGTTCTCTGCGATACCTAGACTGTGATCAAGT 356
Query 628 GAGGATAGTAGGAATCTGTGGCCCTGCAGGAATCGG 663
|||||| |||||| | ||| ||||| |||||||||
Sbjct 357 GAGGATGGTAGGATTATGTAGCCCTATAGGAATCGG 392
> Ahg907021 jgi|Araly1|907021|Al_scaffold_0002_102
Length=2829
Score = 579 bits (313), Expect = 6e-164
Identities = 1071/1424 (75%), Gaps = 104/1424 (7%)
Strand=Plus/Plus
Query 36 CTTCTGC-TCG-AACTTGGAGATACAACGTCTTCCCGAGCTTCCATGGAGGAGATATTCG 93
|||| || ||| ||| |||| |||| |||||||| ||||||| ||||||| ||| | ||
Sbjct 23 CTTC-GCTTCGCAAC-TGGACATACCACGTCTTCGCGAGCTTTCATGGAGAAGACGTCCG 80
Query 94 TAAGACTTTTCTCTCTCATTTACGTAAGCAGTTCAACT-CAAATGGGATTACAATGTTTG 152
||| || ||||| |||| |||| || ||||| | || | |||||||| || ||||| |
Sbjct 81 TAAAACATTTCTGAGTCATATACGCAAACAGTTTATCTGC-AATGGGATCACGATGTTCG 139
Query 153 ATGATCAAGGAATCGAGAGGA-GCCAAACCA-TAGCCCCTGCTCTCATACAAGCGATTAG 210
|||||||||| ||| ||| || || |||||| || |||||| |||||||||| ||||||
Sbjct 140 ATGATCAAGGGATCAAGA-GAGGCAAAACCATTA-CCCCTGAACTCATACAAGGGATTAG 197
Query 211 AGAATCTAGGATATCGATTGTGGTTCTTTCAAAGAACTATGCTTCTTCGAGTTGGTGCTT 270
|||||| ||||| ||||| | || || ||||| || ||||||||||| || ||||| ||
Sbjct 198 AGAATCGAGGATCTCGATCATCGTACTCTCAAAAAATTATGCTTCTTCCAGCTGGTGTTT 257
Query 271 GAATGAATTGGTGGAGATTTTGAAATGC-----A-A-A---GAC--GTAGTGATG-CCGA 317
| |||| | ||||||| ||||| ||| | | | ||| |||||||| | |
Sbjct 258 GGATGAGCTACTGGAGATATTGAAGTGCAGGGAAGATATTGGACAAATAGTGATGACAG- 316
Query 318 TCTTCTATGAAGTAGATCCATCCGATGTACGGAAACAGACCGGAGATTTTGGGAAGGCCT 377
||||||| | ||||||| |||| ||||| |||||||| |||||||| ||||||| || |
Sbjct 317 TCTTCTACGGAGTAGATACATCTGATGTGCGGAAACAAACCGGAGAATTTGGGATTGCTT 376
Query 378 TCAA-AAATAGTTGTAAAAGTAAAACTAAGGAGGAGAGGCAG-AGATGGATCCAAGCTTT 435
|||| ||| | |||| ||||||| ||||||||| |||| ||||||| |||||||||
Sbjct 377 TCAACAAA-ACTTGTGCTGGTAAAACGGAGGAGGAGA-GCAGAAGATGGAGCCAAGCTTT 434
Query 436 AATTTTTGTTGGCAACATAGCTGGAGAACACTCGCTGAAA-TGGGAAAATGAAGCGGATA 494
| || || ||||||||| |||| | ||| | ||| || ||||||| ||||| |
Sbjct 435 GACCGATGCTGCCAACATAGCAGGAGTAGACT-TCAAAAACTGCAAAAATGAGGCGGAAA 493
Query 495 TGATTGAAAAGATAGCCAAA-GATGTTTC-AGATAAACTGAATGCT-ACACCTTCTAAAG 551
||||||| |||| | |||| ||||||| | | ||||||||| | ||||| ||||| |
Sbjct 494 TGATTGAGGAGATTG-CAAACCATGTTTCTA-ACCAACTGAATG-TGACACCGTCTAAGG 550
Query 552 ATTTTGAT-GCATTTGTGGGACTTGAGTTTCACATT-AG-GGAATTAAGTTCTCTGCTAT 608
|||||||| ||| | || ||||| ||| ||| || || | ||| || ||| |||||
Sbjct 551 ATTTTGATGGCA-TGGTAGGACTAGAGGCTCA-TTTGAGAGAAATGGAG-TCTTTGCTAG 607
Query 609 ACCTAGACTATGAG--CAAG-TGAGGATAGTAGGAATCTGTGGCCCTGCAGGAATCGGTA 665
| |||| | | || || | | || || ||||||| || ||||| || || ||||
Sbjct 608 ATTTAGA-T-TCAGTTGGAGTTCA-AATGGTTGGAATCTACGGTCCTGCGGGCATTGGTA 664
Query 666 AGACTACCATTGCTCGTGCTTTACAAAGCCTACTCTCTAGCAATTTTCAGCGA-AGTTGT 724
||| |||||||||| | ||| |||| || | ||| |||| | ||||| | | | ||||
Sbjct 665 AGAGTACCATTGCTAGAGCTCTACATAGTCGACTTTCTAATAGGTTTCAAC-ATAATTGT 723
Query 725 TTTATGGAGAATGTTA-GGGGAAGTCTT-AATATTGGGCTTGACGAGTATGGTCTGAAG- 781
||| |||| || | ||| ||| ||| ||||| |||| || |||||| |||||
Sbjct 724 TTTGTGGA-CATCCAATGGGAAAG-CTTCCGCATTGGTTTTGATGATTATGGTTTGAAGC 781
Query 782 TTAGATTTACAAGAACGACTTCTTTCAAAGATTATGAACCAAAAG-GGTA-TGAGGATAG 839
| | |||||||||| | |||||||||| ||| || ||| ||| || | ||||||||
Sbjct 782 TGCG-TTTACAAGAAAAATTTCTTTCAAATATTTTGGACC-TAAGTGG-ACTGAGGATA- 837
Query 840 AG-CATTTAGGCACAATAAGAGATA-GG-T-TACATGACCAAAAAGTGCTTATCATTCTA 895
|| |||||||| | |||| ||| | || | | || | | | ||||||||||||||
Sbjct 838 AGCCATTTAGGTGCCATAAAAGA-ACGGCTATCCA--AGCTGAGGGTGCTTATCATTCTT 894
Query 896 GATGATGTTAATGATCT----CGATTTGTATGCTTTGGCTGATCAGACAACGTGGTTTGG 951
|||||||| || || | | | | | | || ||||| || | || |||||||||||
Sbjct 895 GATGATGTGAACCATATGAAGCAACTAG-AGGCGTTGGCAAATGAAACTACGTGGTTTGG 953
Query 952 TCCTGGAAGTAGGATTATCGTGACAACAGAAGACAACGAGCTTTTGCAGAAACATGATAT 1011
|||||||||||||||||| |||||||||||| |||| |||||| |||| |||||| |||
Sbjct 954 TCCTGGAAGTAGGATTATTGTGACAACAGAAAACAAAGAGCTTCTGCATCAACATGGTAT 1013
Query 1012 TAACAATGTC-TACCATGTGGATTTTCCATCT-A-GAAAAGAAGCTCTTGAGATCTTTTG 1068
|||||| | |||||||||| ||||||||| | ||||| | || || ||||||| ||
Sbjct 1014 CAACAATA-CGTACCATGTGGGGTTTCCATCTGATGAAAA-A-GCGCTCAAGATCTTATG 1070
Query 1069 -CAGATGTGCTTTTAG-ACAAAGCTCTGCACCTGATACGATTCTAAA--GCTTGCAG-AA 1123
| ||| |||||| || | |||||| | ||| | || | || |||| ||||||| ||
Sbjct 1071 TC-GATATGCTTTCAGGA-AAAGCTATCCACATAATG-GTTT-TAAAAAGCTTGCATTAA 1126
Query 1124 CGAGTAACAGAGCTTTGTGGTAATCTTCCATTGGGTCTCTGTGTCATAGGTTCATCTTTA 1183
||||||||||||||||||| || |||||||||| |||| |||| | |||||||| |||
Sbjct 1127 -GAGTAACAGAGCTTTGTGGCAACCTTCCATTGGCTCTCCGTGTGGTTGGTTCATCATTA 1185
Query 1184 CACGGGAA-AACTGAGGATGAGTGGGAA-ATTTTAAT-TCGCAGACTAGAAATTAGTCTT 1240
| ||||| || |||||| ||||||||| | | ||| | |||| ||||| | || | ||
Sbjct 1186 CGTGGGAAGAA-TGAGGAGGAGTGGGAAGAAGT-AATAT-GCAGGCTAGACAGTATTTTT 1242
Query 1241 GATCG--A-GATAACGAGGCACAACTTAGAGTTGGGTATGATAGCTTACATGAGAACGAG 1297
|||| | |||| | ||| | ||| |||||||| ||||| || ||||||||||| |||
Sbjct 1243 GATCATCAAGATATCAAGGAAGTACTAAGAGTTGGTTATGAGAGTTTACATGAGAATGAG 1302
Query 1298 CAAGCTTTATTTCTC-AGCATTGCAGTCTTCTTCAACTATAAAGACCGTCAGCTTGTGAT 1356
||| || |||||||| | |||| ||||||||||||||||| ||| || | |||||||
Sbjct 1303 CAATCTCTATTTCTCCA-CATTTCAGTCTTCTTCAACTATCGAGATGGTGATCTTGTGAC 1361
Query 1357 GGCCATGCTC-CTTGACA-GTAACCTAGATGTCGAGTATGGGTT 1398
|||||| | || |||| | ||| | |||||| | ||||||||
Sbjct 1362 AGCCATGTTGGCT-GACAAG-AACTTGGATGTCAAATATGGGTT 1403
> Ahg493465 jgi|Araly1|493465|fgenesh2_kg.7__2898__AT4G14370.1
Length=5602
Score = 518 bits (280), Expect = 1e-145
Identities = 761/985 (77%), Gaps = 66/985 (7%)
Strand=Plus/Plus
Query 1198 GGATGAGTGGGAAATTTTAATTCG-CAGACTAGAAATTAGTCTTGATCGAGATAACGAGG 1256
||||||||||||| | | ||| | ||||||||||| ||||||||||||| || |||||
Sbjct 792 GGATGAGTGGGAAGCTCT-ATTGGACAGACTAGAAACTAGTCTTGATCGAAATGTCGAGG 850
Query 1257 CA-CAACTTAGAGTTGGGTATGATAGCTTACATG-AGAACGAGCAAGCTTTATTTCTC-A 1313
| | ||||||||||||||||||||||||||||| |||| || ||||| |||||| | |
Sbjct 851 GAGC-ACTTAGAGTTGGGTATGATAGCTTACATGTAGAA-GAACAAGCGCTATTTCGCTA 908
Query 1314 GCATTGCAGTCTTCTTCAACTA---TAAAGACCG-TCAGCTTGTGATGGCCATGCTC-CT 1368
||| || ||||| |||||||| |||||| | ||| | ||||| || |||||| ||
Sbjct 909 -CATGGCGGTCTTTTTCAACTACAATAAAGAT-GATCA--T-GTGATCGCAATGCTCGCT 963
Query 1369 TGACAGTAACCTAGATGTCGAGTATGGGTT-AAGAACCCTCGCCAATAAATCTCTAATAC 1427
||||||||| | |||||| | | ||||| || || ||| |||| ||||| || |||
Sbjct 964 -GACAGTAACTTGGATGTCAAACAAGGGTTGAA-AATCCTAACCAAGAAATCACTCATAT 1021
Query 1428 ATATATCTAGGAATGAGAAAATAGTGATGCATAACTTACTACAACATGTGGGTAGACAAG 1487
||| ||||| | || ||||||||||||||| || ||||||||||| |||||||||||||
Sbjct 1022 ATAAATCTACCAGTGGGAAAATAGTGATGCACAAATTACTACAACAAGTGGGTAGACAAG 1081
Query 1488 CCATTCAAAGACAAGAACCTTGGAAACGCCACATCTTAATAGATGCT-GACGAGATATGC 1546
| ||||| |||||||| ||| |||||||||||||||| ||||||| | || ||||| | |
Sbjct 1082 CAATTCATAGACAAGAGCCTAGGAAACGCCACATCTTGATAGATG-TAGATGAGATTT-C 1139
Query 1547 AATGTCCTTGAAAATGATACAGATGCTAGAATTG-TGTCAGGGATATCATTTGATATATC 1605
| | |||| ||||| |||||| ||||| || | | ||| ||||| |||||| |||
Sbjct 1140 --T--C-TTGAGAATGACACAGATACTAGAGCTGCTAT-AGGCATATCGCTTGATACATC 1193
Query 1606 CAGAATCGGCGAAGtttttttAAGCGAGAGAGCTTTTAAAAGATTGTGTAATCTCCAATT 1665
||||| | ||||||| |||| ||| ||||||| |||||| || ||||||| | |||
Sbjct 1194 TGGAATCAACAAAGTTTTCATAAGTGAGGGAGCTTTCAAAAGAATGCGTAATCTTCGATT 1253
Query 1666 CCTCAGGGTGTTTAAGACTGGATATGATGaaaaaaa-CAGAGTGCG-CATACCGGAGAAC 1723
||| || || | ||||| |||||| | |||| | || |||| | |||||| || ||
Sbjct 1254 CCTAAGTGTCTACAAGACAAGATATGTTCAAAATGATCA-AGTG-GACATACCTAAGGAC 1311
Query 1724 ATGGAGTTTCCACCTCGTCTAAGGTTACTACAG-TGGGAAGCATATCCGAGGAGAA-G-T 1780
||||||||||||||| |||| ||||||| | | ||||||||||| || | || || | |
Sbjct 1312 TTGGAGTTTCCACCTCATCTACGGTTACTTC-GCTGGGAAGCATACCC-ACGA-AATGCT 1368
Query 1781 CTTTCT-CTTAAACTTAA-CCTGGAATATCTTGTCGAACTTGATATGGAAG-GTAGCCTG 1837
||| || || | | || | || | |||||||| | ||||| ||| || ||| | |||| |
Sbjct 1369 CTTCCTACT-ACATTTCATCCAG-AATATCTTATAGAACTCGATTTGCAAGAG-AGCCAG 1425
Query 1838 CTCGAGAAGCTATGGGATGGAACTCAGCCCCTTGCAAATCTCAAGAAGATGTCTTTGTCA 1897
|| |||| ||| ||| | ||||| ||||| ||| ||||||||||||||||| |||| ||
Sbjct 1426 CTTGAGAGGCTTTGGCAAGGAACACAGCCACTTACAAATCTCAAGAAGATGGATTTGACA 1485
Query 1898 AGTTCATGGT-ATTTAAAGAAACTTCCGGATCTGTCAAATGCTACAAATCTCGA-AGAAT 1955
| || | | |||| ||| ||||||| ||||| |||||||||||||||||||| ||| |
Sbjct 1486 CGATCTTC-TCATTTGAAGGAACTTCCAGATCTTTCAAATGCTACAAATCTCGAGAGA-T 1543
Query 1956 TGGATCTGAGAGCTTGCCAGAATTTAGTAGAGCTTCCTTCCTCCTTTTCTTATCTGC-AT 2014
|||| || || |||| ||| ||| || ||| |||||||||| ||||| | || | |
Sbjct 1544 TGGAACTAAGTTATTGCAAGAGTTTGGTGGAGATTCCTTCCTCTTTTTCGGAACTTCGAA 1603
Query 2015 AAGCTAAAGTAT-TTGAATA-TGATGGGA-TGCAGAAGGCTAAAAGAAGTTCCACCTCAT 2071
|| ||| || | |||| || | | | |||| || |||| ||| |||||| ||| |
Sbjct 1604 AA-CTAGAG-ACGTTGA-TAAT-ACACAACTGCACAAAGCTAGAAGTTGTTCCAACTC-T 1658
Query 2072 -ATCAACTTGA-AGTCTCTTGAATTGGTCAACATGTATGGATGCTCA-AGATTAAAAAG- 2127
||||||||| | |||||||| || ||| ||||| | || |||||| | |||||||||
Sbjct 1659 CATCAACTTGGCA-TCTCTTGATTTCGTCGACATGCAAGGTTGCTCACA-ATTAAAAAGT 1716
Query 2128 CTTTCCAGATATTTCTACAAACATC 2152
||| |||| |||||||||| |||||
Sbjct 1717 CTT-CCAGGTATTTCTACACACATC 1740
Score = 359 bits (194), Expect = 8e-98
Identities = 543/701 (77%), Gaps = 65/701 (9%)
Strand=Plus/Plus
Query 241 AAAGAACTATGCTTCTTCGAGTTGGTGCTTGAATGAATTGGTGGAGATTTTGAAATGCAA 300
|||||||||||||||||||||||||||||||||||| ||| |||||||| | || |||||
Sbjct 9 AAAGAACTATGCTTCTTCGAGTTGGTGCTTGAATGAGTTGTTGGAGATTATCAAGTGCAA 68
Query 301 AGA--C---G-------TAGTGATGCC-GATCTTCTATGAAGTAGATCCATCCGATGTAC 347
|| | | |||||||| | | | || || | |||||||||||| ||||| |
Sbjct 69 GGAAGCTATGGGACAAATAGTGATGACTGTTTTT-TACGGAGTAGATCCATCTGATGTGC 127
Query 348 GGAAACAGACCGGAGATTTTGGGAAGGCCTTCAA--AAA--TAGTTGTAAAAGTAAAACT 403
|||||||||| ||||| || |||| ||| ||| | ||| | ||| | ||||| |
Sbjct 128 GGAAACAGACAGGAGAATTCGGGAGGGCTTTCGATGAAACGT-GTTCTCGAAGTACGA-- 184
Query 404 AAGGAGGAGAGGCAG-AGATGGA-TCCAAGCTTT-AATTTTTGTTGGCAACATAGCTGGA 460
||| || |||||| | ||||||| || ||||||| || | || |||||||||||||||
Sbjct 185 AAG-AGAAGAGGC-GTAGATGGAGTC-AAGCTTTGAACGAT-GTGGGCAACATAGCTGGA 240
Query 461 GAACACT-CGCTGAAA-TGGGAAAATGAAG-CGGATATGATTGAAAAGATAGCCAAAGAT 517
||||||| | || ||| ||||| ||||| | | | |||||||||||||| | | ||||
Sbjct 241 GAACACTTC-CT-AAACTGGGACAATGA-GTCAAAAATGATTGAAAAGATTTCTAGAGAT 297
Query 518 GTTTCAGATAAACTGAATGCTACAC-CTTCTAAAGATTTTGATGCATTTG-T-GGGACTT 574
||||| | | | | ||| ||||| || ||| ||||||||||| || || | ||| |||
Sbjct 298 ATTTCAAACATATTAAATACTACAATCT-CTAGAGATTTTGATG-ATATGGTTGGG-CTT 354
Query 575 GA-GTTTCACATTAG-GGAATT-AAGT-TCTCTGCTATACCTAGACTATGAGCAAGTGAG 630
|| | ||| || | |||| | |||| | | || || | |||| |||||| | | |||
Sbjct 355 GAAGCA-CAC-TTGGAGGAAATGAAGTAT-T-TGTTAGATTTAGATTATGAGGATG-GAG 409
Query 631 ----GATAGTAGGAATCTGTGGCCCTGCAGGAATCGGTAAGACTACCATTGCTCGTGCTT 686
|||||| ||||| ||||| ||||||||||| |||||||||||||||||| | ||||
Sbjct 410 CTATGATAGTTGGAATATGTGGTCCTGCAGGAATTGGTAAGACTACCATTGCTAGAGCTT 469
Query 687 TACAAAGCCTACTCTCTAGCAATTTTCAGCGAAGTTGTTTTATGGAGAATGTTAGGGGAA 746
|| | || ||||||| || | ||| |||| |||||||||||||||||| |||||||||
Sbjct 470 TATATAGTTTACTCTCCAGTAGTTTCCAGCTTAGTTGTTTTATGGAGAATCTTAGGGGAA 529
Query 747 GTCTT-AATATTGGGCTTGACGAGTATGG-TCTGAAGTTA-GATTTACAAGAAC-GACTT 802
| ||| |||| ||| |||||||||||||| || |||| || | ||||||||| | | |||
Sbjct 530 G-CTTTAATAGTGGTCTTGACGAGTATGGCTC-GAAGCTAAG-TTTACAAGAGCAG-CTT 585
Query 803 CTTTCAAAGATTAT-GAACCAAAAGGGTATGAGGATAGAGCATTTAGGCACAATA-AGAG 860
|||||||| || || ||||||||| |||||||| ||| | |||||||| | ||| | ||
Sbjct 586 CTTTCAAAAAT-ATTGAACCAAAATGGTATGAGAATATACCATTTAGGTGCGATACA-AG 643
Query 861 ATAGGTTACATGACCAAAAAGTGCTTATCATTCTAGATGAT 901
| ||| || ||||||||||||||| |||||||| ||||||
Sbjct 644 AAAGGCTATGTGACCAAAAAGTGCTAATCATTCTTGATGAT 684
> Ahg891298 jgi|Araly1|891298|Al_scaffold_0007_3284
Length=3666
Score = 104 bits (56), Expect = 4e-21
Identities = 79/90 (88%), Gaps = 2/90 (2%)
Strand=Plus/Plus
Query 306 TAGTGATG-CCGATCTTCTATGAAGTAGATCCATCCGATGTACGGAAACAGACCGGAGAT 364
|||| ||| || || |||||||||||||||||| | |||||| |||||| |||||||||
Sbjct 206 TAGTAATGACC-ATTTTCTATGAAGTAGATCCAACAGATGTAAAGAAACAAACCGGAGAT 264
Query 365 TTTGGGAAGGCCTTCAAAAATAGTTGTAAA 394
|||||||||||||||||||| | |||||||
Sbjct 265 TTTGGGAAGGCCTTCAAAAAAACTTGTAAA 294
> Ahg915422 jgi|Araly1|915422|Al_scaffold_0008_173
Length=5253
Score = 60.2 bits (32), Expect = 9e-08
Identities = 51/60 (85%), Gaps = 2/60 (3%)
Strand=Plus/Plus
Query 245 AACTATGCTTCTTCGAGTTGGTG-CTTGAATGAATTGGTGGAGATTTTGAAATGCAAAGA 303
||||| ||| |||| | ||||| || | | |||||||||||||||||||||||||||||
Sbjct 214 AACTACGCTACTTCCAAATGGTGCCTAG-ACGAATTGGTGGAGATTTTGAAATGCAAAGA 272
Score = 60.2 bits (32), Expect = 9e-08
Identities = 51/60 (85%), Gaps = 2/60 (3%)
Strand=Plus/Plus
Query 245 AACTATGCTTCTTCGAGTTGGTG-CTTGAATGAATTGGTGGAGATTTTGAAATGCAAAGA 303
||||| ||| |||| | ||||| || | | |||||||||||||||||||||||||||||
Sbjct 2452 AACTACGCTACTTCCAAATGGTGCCTAG-ACGAATTGGTGGAGATTTTGAAATGCAAAGA 2510
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 124334090991
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5