BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G39100.1 Length=835 Score E Sequences producing significant alignments: (Bits) Value Ahg494078 jgi|Araly1|494078|fgenesh2_kg.7__3511__AT5G39100.1 944 0.0 Ahg891829 jgi|Araly1|891829|Al_scaffold_0007_3815 909 0.0 Ahg891828 jgi|Araly1|891828|Al_scaffold_0007_3814 904 0.0 Ahg891952 jgi|Araly1|891952|Al_scaffold_0007_3938 881 0.0 Ahg891830 jgi|Araly1|891830|Al_scaffold_0007_3816 876 0.0 Ahg891827 jgi|Araly1|891827|Al_scaffold_0007_3813 662 0.0 Ahg891831 jgi|Araly1|891831|Al_scaffold_0007_3817 571 2e-162 > Ahg494078 jgi|Araly1|494078|fgenesh2_kg.7__3511__AT5G39100.1 Length=658 Score = 944 bits (511), Expect = 0.0 Identities = 612/661 (93%), Gaps = 5/661 (1%) Strand=Plus/Plus Query 177 TTTTTGTGAATGGAAAGTTCTGTAAGGATCCCAAGCAAGCGAAGGCAGAATAATTCTTCT 236 ||||||||||||| ||||||||||||||||| |||||||| ||||||||| | ||||||| Sbjct 1 TTTTTGTGAATGGTAAGTTCTGTAAGGATCCGAAGCAAGCCAAGGCAGAAGATTTCTTCT 60 Query 237 TCTCAGGCCTCAACCAGGCAGGAAGCACTAATAATAAAGTCAGATCCAACGTGACAACAG 296 |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| | Sbjct 61 TCTCAGGCCTCAACCAGGCAGGAAACACTGATAATAAAGTCAGATCCAACGTGACAACGG 120 Query 297 TCAATGTCGACCAGATTCCAGGGTTAAACACTATGGGAATATCCTTGGTCCGCATAGACT 356 |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 121 TCAATGTCGATCAGATTCCAGGGTTAAACACTTTGGGAATATCCTTGGTCCGCATAGACT 180 Query 357 ATGCACCATATGGACAAAACCCGCCTCACACGCACCCTCGTGCTACTGAGATCCTTGTCC 416 |||| || ||||||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct 181 ATGCGCCGTATGGACAAAACCCGCCTCACACGCACCCGCGTGCTACTGAGATCCTTGTTC 240 Query 417 TTATCGAGGGAACGTTATATGTTGGTTTTGTCTCTTCCAATCAAGACAATAACCGTCTAT 476 || ||||||||||||||||||| || |||||||||||||||||||||||||||||| ||| Sbjct 241 TTGTCGAGGGAACGTTATATGTCGGGTTTGTCTCTTCCAATCAAGACAATAACCGTTTAT 300 Query 477 TCGCCAAAGTTCTGTACCCGGGTGACGTGTTTGTGTTTCCCATAGGAATGATCCATTTTC 536 |||||||||| ||| |||| || |||||||| ||||| |||||||||||||||||||||| Sbjct 301 TCGCCAAAGTGCTGAACCCCGGCGACGTGTTCGTGTTCCCCATAGGAATGATCCATTTTC 360 Query 537 AAGTGAATATCGGGAAAACGCCTGCGGTGGCCTTCGCTGGATTGAGTAGTCAGAATGCTG 596 |||||||||||||||| || || || ||||||| |||||||||||||||||||| |||| Sbjct 361 AAGTGAATATCGGGAAGACCCCCGCAATGGCCTTTGCTGGATTGAGTAGTCAGAACGCTG 420 Query 597 GTGTTATCACGATCGCTGATACTGTGTTTGGGTCAACGCCTCCGATTAATCCAGATATTT 656 |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| Sbjct 421 GTGTTATCACGATCGCAGATACTGTGTTTGGGTCAACGCCTCCGATTAATCCATATATTC 480 Query 657 TAGCTCAAGCATTTCAATTAGATGTCAATATTGTCGAGGATCTTGAGGCCAAGTTTAGAA 716 ||||||| |||||||| |||||||||||| ||||| |||| |||||||||||||||| || Sbjct 481 TAGCTCAGGCATTTCAGTTAGATGTCAATGTTGTCAAGGACCTTGAGGCCAAGTTTAAAA 540 Query 717 ACTAAATCTAGTCACCACAATACGAGTGTTTATGGTTGTAACACTTA-AGTAATGATGTA 775 ||||||||||||||||| |||| ||||||||| ||||||||||| | |||||||||||| Sbjct 541 ACTAAATCTAGTCACCATAATAT-AGTGTTTATCGTTGTAACACT-ACAGTAATGATGTA 598 Query 776 ACAAG-AGTTAAAGATTTATGCTCAATATAATAAAGAAAGGTGTTGTTCACCTAATTTGA 834 ||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 599 ACAAGTA-TTAAAGATTTATGCTGAATATAATAAAGAAAGGTGTTGTTCACCTAATTTGA 657 Query 835 T 835 | Sbjct 658 T 658 > Ahg891829 jgi|Araly1|891829|Al_scaffold_0007_3815 Length=669 Score = 909 bits (492), Expect = 0.0 Identities = 612/671 (91%), Gaps = 4/671 (1%) Strand=Plus/Plus Query 53 ATGAGGGTTTCCAAGTCTCTCATCCTGATTACCTTATCGGCTTTGGTCATTTCCTTT-GC 111 ||||||||| ||| ||||||| || |||||||| ||||||||||||||||||||||| || Sbjct 1 ATGAGGGTTCCCATGTCTCTCGTCTTGATTACCATATCGGCTTTGGTCATTTCCTTTGGC 60 Query 112 TGAAGCTTATGATCCAAGTCCACTTCAAGATTTCTGTGTGGCCATTGA-TGACCTCAAAA 170 ||||||| ||||||||||||||||||||| ||||||||||||||| | ||||||||||| Sbjct 61 -GAAGCTTCTGATCCAAGTCCACTTCAAGACTTCTGTGTGGCCATT-AGTGACCTCAAAA 118 Query 171 ATGGTGTTTTTGTGAATGGAAAGTTCTGTAAGGATCCCAAGCAAGCGAAGGCAGAATAAT 230 ||||||||||||||||||| |||||||| |||||||| |||||||||||||||||| | | Sbjct 119 ATGGTGTTTTTGTGAATGGTAAGTTCTGCAAGGATCCGAAGCAAGCGAAGGCAGAAGATT 178 Query 231 TCTTCTTCTCAGGCCTCAACCAGGCAGGAAGCACTAATAATAAAGTCAGATCCAACGTGA 290 |||||| ||||||||||||||||||||| | ||||||||||| ||||| ||||||||||| Sbjct 179 TCTTCTACTCAGGCCTCAACCAGGCAGGGACCACTAATAATAGAGTCAAATCCAACGTGA 238 Query 291 CAACAGTCAATGTCGACCAGATTCCAGGGTTAAACACTATGGGAATATCCTTGGTCCGCA 350 |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 239 CAACGGTCAATGTCGACCAGATTCCAGGGTTAAACACTTTGGGAATATCCTTGGTCCGCA 298 Query 351 TAGACTATGCACCATATGGACAAAACCCGCCTCACACGCACCCTCGTGCTACTGAGATCC 410 ||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||| Sbjct 299 TAGACTATGCACCTTATGGACAAAACCCACCTCACACGCACCCTCGTGCCACTGAGATCC 358 Query 411 TTGTCCTTATCGAGGGAACGTTATATGTTGGTTTTGTCTCTTCCAATCAAGACAATAACC 470 |||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 359 TTGTTCTTGTCGAGGGAACATTATATGTTGGTTTTGTCTCTTCCAATCAAGACAATAACC 418 Query 471 GTCTATTCGCCAAAGTTCTGTACCCGGGTGACGTGTTTGTGTTTCCCATAGGAATGATCC 530 || ||||| ||||||| ||| |||| || |||||||| ||||| |||||||||||||||| Sbjct 419 GTTTATTCACCAAAGTGCTGAACCCCGGCGACGTGTTCGTGTTCCCCATAGGAATGATCC 478 Query 531 ATTTTCAAGTGAATATCGGGAAAACGCCTGCGGTGGCCTTCGCTGGATTGAGTAGTCAGA 590 |||||||||||||||||||||| || || || ||||| || |||||| | |||||||||| Sbjct 479 ATTTTCAAGTGAATATCGGGAAGACCCCAGCAGTGGCTTTTGCTGGACTAAGTAGTCAGA 538 Query 591 ATGCTGGTGTTATCACGATCGCTGATACTGTGTTTGGGTCAACGCCTCCGATTAATCCAG 650 | |||||||||||||||||||| || |||||||| ||||||||||| ||||||||||||| Sbjct 539 ACGCTGGTGTTATCACGATCGCAGACACTGTGTTCGGGTCAACGCCCCCGATTAATCCAG 598 Query 651 ATATTTTAGCTCAAGCATTTCAATTAGATGTCAATATTGTCGAGGATCTTGAGGCCAAGT 710 ||||| | ||||| || ||||| |||||||||||| ||||| |||||||||| ||||||| Sbjct 599 ATATTCTCGCTCAGGCGTTTCAGTTAGATGTCAATGTTGTCAAGGATCTTGAAGCCAAGT 658 Query 711 TTAGAAACTAA 721 ||| ||||||| Sbjct 659 TTAAAAACTAA 669 > Ahg891828 jgi|Araly1|891828|Al_scaffold_0007_3814 Length=669 Score = 904 bits (489), Expect = 0.0 Identities = 609/669 (91%), Gaps = 0/669 (0%) Strand=Plus/Plus Query 53 ATGAGGGTTTCCAAGTCTCTCATCCTGATTACCTTATCGGCTTTGGTCATTTCCTTTGCT 112 ||||||||| ||| ||||||| || ||||||| ||||||||||||||||||||||||| Sbjct 1 ATGAGGGTTCCCATGTCTCTCGTCTTGATTACAATATCGGCTTTGGTCATTTCCTTTGCC 60 Query 113 GAAGCTTATGATCCAAGTCCACTTCAAGATTTCTGTGTGGCCATTGATGACCTCAAAAAT 172 ||||||| ||||||||||||||||||||| ||||| |||||||||| ||||||||||||| Sbjct 61 GAAGCTTCTGATCCAAGTCCACTTCAAGACTTCTGCGTGGCCATTGGTGACCTCAAAAAT 120 Query 173 GGTGTTTTTGTGAATGGAAAGTTCTGTAAGGATCCCAAGCAAGCGAAGGCAGAATAATTC 232 ||||||||||||||||| |||||||| |||||||| |||||||||||||||||| | ||| Sbjct 121 GGTGTTTTTGTGAATGGTAAGTTCTGCAAGGATCCGAAGCAAGCGAAGGCAGAAGATTTC 180 Query 233 TTCTTCTCAGGCCTCAACCAGGCAGGAAGCACTAATAATAAAGTCAGATCCAACGTGACA 292 |||| ||||||||||||||||||||| | ||||||||||| ||||| ||||||||||||| Sbjct 181 TTCTACTCAGGCCTCAACCAGGCAGGGACCACTAATAATAGAGTCAAATCCAACGTGACA 240 Query 293 ACAGTCAATGTCGACCAGATTCCAGGGTTAAACACTATGGGAATATCCTTGGTCCGCATA 352 || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 241 ACGGTCAATGTCGACCAGATTCCAGGGTTAAACACTTTGGGAATATCCTTGGTCCGCATA 300 Query 353 GACTATGCACCATATGGACAAAACCCGCCTCACACGCACCCTCGTGCTACTGAGATCCTT 412 ||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct 301 GACTATGCACCTTATGGACAAAACCCACCTCACACGCACCCTCGTGCCACTGAGATCCTT 360 Query 413 GTCCTTATCGAGGGAACGTTATATGTTGGTTTTGTCTCTTCCAATCAAGACAATAACCGT 472 || ||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct 361 GTTCTTGTCGAGGGAACATTATATGTTGGTTTTGTTTCTTCCAATCAAGACAATAACCGT 420 Query 473 CTATTCGCCAAAGTTCTGTACCCGGGTGACGTGTTTGTGTTTCCCATAGGAATGATCCAT 532 ||||||||||||| ||| |||| || |||||||| ||||| |||||||||||||||||| Sbjct 421 TTATTCGCCAAAGTGCTGAACCCCGGCGACGTGTTCGTGTTCCCCATAGGAATGATCCAT 480 Query 533 TTTCAAGTGAATATCGGGAAAACGCCTGCGGTGGCCTTCGCTGGATTGAGTAGTCAGAAT 592 |||||||||||||||||||| || || || ||||| || |||||| | ||||||||||| Sbjct 481 TTTCAAGTGAATATCGGGAAGACCCCAGCAGTGGCTTTTGCTGGACTAAGTAGTCAGAAC 540 Query 593 GCTGGTGTTATCACGATCGCTGATACTGTGTTTGGGTCAACGCCTCCGATTAATCCAGAT 652 |||||||||||||||||||| || |||||||| ||||||||||| ||||||||||||||| Sbjct 541 GCTGGTGTTATCACGATCGCAGACACTGTGTTCGGGTCAACGCCCCCGATTAATCCAGAT 600 Query 653 ATTTTAGCTCAAGCATTTCAATTAGATGTCAATATTGTCGAGGATCTTGAGGCCAAGTTT 712 ||| | ||||| || ||||| |||||||||||| ||||| |||||||||| || |||||| Sbjct 601 ATTCTCGCTCAGGCGTTTCAGTTAGATGTCAATGTTGTCAAGGATCTTGAAGCGAAGTTT 660 Query 713 AGAAACTAA 721 | ||||||| Sbjct 661 AAAAACTAA 669 > Ahg891952 jgi|Araly1|891952|Al_scaffold_0007_3938 Length=669 Score = 881 bits (477), Expect = 0.0 Identities = 606/670 (90%), Gaps = 2/670 (0%) Strand=Plus/Plus Query 53 ATGAGGGTTTCCAAGTCTCTCATCCTGATTACCTTATCGGCTTTGGTCATTTCCTTTGCT 112 ||||||||| ||| || |||| || |||||||| ||||||||||||||||||||||||| Sbjct 1 ATGAGGGTTCCCATGTTTCTCGTCTTGATTACCATATCGGCTTTGGTCATTTCCTTTGCC 60 Query 113 GAAGCTTATGATCCAAGTCCACTTCAAGATTTCTGTGTGGCCATTGATGACCTCAAAAAT 172 |||||| |||||||||||||||||||||| |||||||||||||||| |||||| || ||| Sbjct 61 GAAGCTAATGATCCAAGTCCACTTCAAGACTTCTGTGTGGCCATTGGTGACCTTAAGAAT 120 Query 173 GGTGTTTTTGTGAATGGAAAGTTCTGTAAGGATCCCAAGCAAGCGAAGGCAGAATAATTC 232 ||||||||||||||||| ||||| ||||||||||| |||||||||||||||||| | ||| Sbjct 121 GGTGTTTTTGTGAATGGTAAGTTTTGTAAGGATCCGAAGCAAGCGAAGGCAGAAGATTTC 180 Query 233 TTCTTCTC-AGGCCTCAACCAGGCAGGAAGCACTAATAATAAAGTCAGATCCAACGTGAC 291 |||||| | |||||||||| ||||||||| ||||| ||||| ||||| |||||||||||| Sbjct 181 TTCTTC-CAAGGCCTCAACAAGGCAGGAAACACTACTAATAGAGTCAAATCCAACGTGAC 239 Query 292 AACAGTCAATGTCGACCAGATTCCAGGGTTAAACACTATGGGAATATCCTTGGTCCGCAT 351 |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| Sbjct 240 AACAGTCAATGTCGACCAGATTCCCGGGTTAAACACTTTGGGAATATCCTTGGTCCGCAT 299 Query 352 AGACTATGCACCATATGGACAAAACCCGCCTCACACGCACCCTCGTGCTACTGAGATCCT 411 ||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 300 AGACTATGCGCCTTATGGACAAAACCCGCCTCACACGCACCCTCGTGCCACTGAGATCCT 359 Query 412 TGTCCTTATCGAGGGAACGTTATATGTTGGTTTTGTCTCTTCCAATCAAGACAATAACCG 471 ||| ||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct 360 TGTTCTTGTCGAGGGAACGTTATATGTAGGTTTTGTCTCCTCCAATCAAGACAATAACCG 419 Query 472 TCTATTCGCCAAAGTTCTGTACCCGGGTGACGTGTTTGTGTTTCCCATAGGAATGATCCA 531 | ||||||||||||| ||| |||| || |||||||| ||||| ||||||||||||||||| Sbjct 420 TTTATTCGCCAAAGTGCTGAACCCCGGCGACGTGTTCGTGTTCCCCATAGGAATGATCCA 479 Query 532 TTTTCAAGTGAATATCGGGAAAACGCCTGCGGTGGCCTTCGCTGGATTGAGTAGTCAGAA 591 ||| ||||||||||||||||| || ||||| ||||| || |||||| | | ||||||||| Sbjct 480 TTTCCAAGTGAATATCGGGAAGACCCCTGCAGTGGCTTTTGCTGGACTAAATAGTCAGAA 539 Query 592 TGCTGGTGTTATCACGATCGCTGATACTGTGTTTGGGTCAACGCCTCCGATTAATCCAGA 651 |||||||||||||||||||| || |||||||| ||||||||||| || ||||||||||| Sbjct 540 CGCTGGTGTTATCACGATCGCAGACACTGTGTTCGGGTCAACGCCCCCAATTAATCCAGA 599 Query 652 TATTTTAGCTCAAGCATTTCAATTAGATGTCAATATTGTCGAGGATCTTGAGGCCAAGTT 711 |||| | ||||| || ||||| |||||||||||| ||||| |||||||||| |||||||| Sbjct 600 TATTCTCGCTCAGGCGTTTCAGTTAGATGTCAATGTTGTCAAGGATCTTGAAGCCAAGTT 659 Query 712 TAGAAACTAA 721 || ||||||| Sbjct 660 TAAAAACTAA 669 > Ahg891830 jgi|Araly1|891830|Al_scaffold_0007_3816 Length=669 Score = 876 bits (474), Expect = 0.0 Identities = 606/671 (90%), Gaps = 4/671 (1%) Strand=Plus/Plus Query 53 ATGAGGGTTTCCAAGTCTCTCATCCTGATTACCTTATCGGCTTTGGTCATTTCCTTTGCT 112 ||||||||| ||| ||||||| || |||||||| |||| |||||||||||||||||||| Sbjct 1 ATGAGGGTTCCCATGTCTCTCGTCTTGATTACCATATCAGCTTTGGTCATTTCCTTTGCC 60 Query 113 GAAGCTTATGATCCAAGTCCACTTCAAGATTTCTGTGTGGCCATTGATGACCTCAAAAAT 172 ||||||| ||||||||||||||||||||| ||||| |||||||||| ||||||||||||| Sbjct 61 GAAGCTTCTGATCCAAGTCCACTTCAAGACTTCTGCGTGGCCATTGGTGACCTCAAAAAT 120 Query 173 GGTGTTTTTGTGAATGGAAAGTTCTGTAAGGATCCCAAGCAAGCGAAGGCAGAATAATTC 232 ||||||||||||||||| ||||||||||||||||| |||||||||||||||||| | ||| Sbjct 121 GGTGTTTTTGTGAATGGTAAGTTCTGTAAGGATCCGAAGCAAGCGAAGGCAGAAGATTTC 180 Query 233 TTCTTCT-CAGGCCTCAACCAGGCAGGAAGCACTAATAATAAAGTCAGATCCAACGTGAC 291 ||||| | ||||||||||| ||||||||| ||||| |||| ||||| |||||||||||| Sbjct 181 TTCTT-TGCAGGCCTCAACAAGGCAGGAAACACTACCAATAGAGTCAAATCCAACGTGAC 239 Query 292 AACAGTCAATGTCGACCAGATTCCAGGGTTAAACACTA-TGGGAATATCCTTGGTCCGCA 350 ||| |||||||||||||||||||| ||||||||||| | ||||||||||||||||||||| Sbjct 240 AACGGTCAATGTCGACCAGATTCCCGGGTTAAACAC-ATTGGGAATATCCTTGGTCCGCA 298 Query 351 TAGACTATGCACCATATGGACAAAACCCGCCTCACACGCACCCTCGTGCTACTGAGATCC 410 |||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 299 TAGACTATGCGCCTTATGGACAAAACCCGCCTCACACGCACCCTCGTGCCACTGAGATCC 358 Query 411 TTGTCCTTATCGAGGGAACGTTATATGTTGGTTTTGTCTCTTCCAATCAAGACAATAACC 470 |||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 359 TTGTTCTTGTCGAGGGAACGTTATATGTAGGTTTTGTCTCTTCCAATCAAGACAATAACC 418 Query 471 GTCTATTCGCCAAAGTTCTGTACCCGGGTGACGTGTTTGTGTTTCCCATAGGAATGATCC 530 || ||||||||||||| ||| |||| || |||||||| ||||| ||||| |||||||||| Sbjct 419 GTTTATTCGCCAAAGTGCTGAACCCCGGCGACGTGTTCGTGTTCCCCATTGGAATGATCC 478 Query 531 ATTTTCAAGTGAATATCGGGAAAACGCCTGCGGTGGCCTTCGCTGGATTGAGTAGTCAGA 590 |||||||||||||||||||||| || || || |||||||| |||||| | |||||||||| Sbjct 479 ATTTTCAAGTGAATATCGGGAAGACCCCCGCAGTGGCCTTTGCTGGACTAAGTAGTCAGA 538 Query 591 ATGCTGGTGTTATCACGATCGCTGATACTGTGTTTGGGTCAACGCCTCCGATTAATCCAG 650 | ||||||||||||| |||||| || |||||||| ||||||||||| || |||||||||| Sbjct 539 ACGCTGGTGTTATCATGATCGCAGACACTGTGTTCGGGTCAACGCCCCCAATTAATCCAG 598 Query 651 ATATTTTAGCTCAAGCATTTCAATTAGATGTCAATATTGTCGAGGATCTTGAGGCCAAGT 710 ||||| | ||||| |||||||| |||||||||| ||||| |||||||||| ||||||| Sbjct 599 ATATTCTCGCTCAGGCATTTCAGCTAGATGTCAACGTTGTCAAGGATCTTGAAGCCAAGT 658 Query 711 TTAGAAACTAA 721 ||| ||||||| Sbjct 659 TTAAAAACTAA 669 > Ahg891827 jgi|Araly1|891827|Al_scaffold_0007_3813 Length=672 Score = 662 bits (358), Expect = 0.0 Identities = 536/622 (86%), Gaps = 11/622 (2%) Strand=Plus/Plus Query 95 TTGGTCATTTCCTTTGCTGAA-GCTTATGATCCAAGTCCACTTCAAGATTTCTGTGTGGC 153 ||||||||| ||||| | || ||||||||||| |||||||| ||||| ||||||||||| Sbjct 43 TTGGTCATTCCCTTTTC-CAATGCTTATGATCCGAGTCCACTCCAAGACTTCTGTGTGGC 101 Query 154 CATTGATGACCTCAAAAATGGTGTTTTTGTGAATGGAAAGTTCTGTAAGGATCCCAAGCA 213 | ||| | ||||||| || ||||||||||||||| ||||||||||||||||| ||||| Sbjct 102 CGTTGGTAACCTCAACAA---TGTTTTTGTGAATGGTAAGTTCTGTAAGGATCCAAAGCA 158 Query 214 AGCGAAGGCAGAATAATTCTTCTTCTCAGGCCTCAACCAGGCAGGAAGCACTAATAATAA 273 ||||||||| ||| | ||||||| |||||| |||||| |||| |||||||| |||||||| Sbjct 159 AGCGAAGGCGGAAGACTTCTTCTACTCAGGTCTCAACAAGGCCGGAAGCACCAATAATAA 218 Query 274 AGTCAGATCCAACGTGACAACAGTCAATGTCGACCAGATTCCAGGGTTAAACACTATGGG 333 |||| ||||||||| |||||||| ||||| || |||||||||||| ||||||||||||| Sbjct 219 TGTCAAATCCAACGTCACAACAGTGAATGTTGATCAGATTCCAGGGCTAAACACTATGGG 278 Query 334 AATATCCTTGGTCCGCATAGACTATGCACCATATGGACAAAACCCGCCTCACACGCACCC 393 |||||| ||||| |||||||||||||| || ||||| ||||||||||||||||| ||||| Sbjct 279 AATATCATTGGTTCGCATAGACTATGCGCCTTATGGCCAAAACCCGCCTCACACACACCC 338 Query 394 TCGTGCTACTGAGATCCTTGTCCTTATCGAGGGAACGTTATATGTTGGTTTTGTCTCTTC 453 ||||| ||||| |||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct 339 GCGTGCCACTGAAATCCTTGTCCTTGTCGAGGGAACGTTATATGTTGGGTTTGTCTCTTC 398 Query 454 CAATCAAGACAATAACCGTCTATTCGCCAAAGTTCTGTACCCGGGTGACGTGTTTGTGTT 513 ||||||||||||||||||||| ||||||||| || || |||| ||||| ||||| ||||| Sbjct 399 CAATCAAGACAATAACCGTCTTTTCGCCAAAATTTTGCACCCCGGTGATGTGTTCGTGTT 458 Query 514 TCCCATAGGAATGATCCATTTTCAAGTGAATATCGGGAAAACGCCTGCGGTGGCCTTCGC 573 |||||||| ||||| ||||||||||||||||||||||| || || ||||| ||||| || Sbjct 459 CCCCATAGGGATGATTCATTTTCAAGTGAATATCGGGAAGACCCCCGCGGTTGCCTTTGC 518 Query 574 TGGA-TTGAGTAGTCAGAATGCTGGTGTTATCACGATCGCTGATACTGTGTTTGGGTC-A 631 ||| || ||||||||||| |||||||| ||||| || || | ||||||||||| || | Sbjct 519 CGGACTT-AGTAGTCAGAACGCTGGTGTCATCACAATTGCAAACACTGTGTTTGGTTCGA 577 Query 632 ACGCCTCCGATTAATCCAGATATTT-TAGCTCAAGCATTTCAATTAGATGTCAATATTGT 690 | ||||| ||| ||||||| | || | ||||| |||||||| |||||||| ||| | || Sbjct 578 AA-CCTCCCATTTATCCAGA-AGTTCTGGCTCAGGCATTTCAGTTAGATGTGAATGTCGT 635 Query 691 CGAGGATCTTGAGGCCAAGTTT 712 | | || ||||||||||||||| Sbjct 636 CAAAGACCTTGAGGCCAAGTTT 657 > Ahg891831 jgi|Araly1|891831|Al_scaffold_0007_3817 Length=501 Score = 571 bits (309), Expect = 2e-162 Identities = 408/455 (90%), Gaps = 9/455 (2%) Strand=Plus/Plus Query 129 GTCCACTTCAAGATTTCTGTGTGGCCATTGA-TGACCTCAAAAATGGT-G---TTTTTGT 183 ||||||||||||| ||||| ||||||||| | |||||||||||||||| | ||||||| Sbjct 46 GTCCACTTCAAGACTTCTGCGTGGCCATT-AGTGACCTCAAAAATGGTGGTAATTTTTGT 104 Query 184 GAATGGAAAGTTCTGTAAGGATCCCAAGCAAGCGAAGGCAGAATAATTCTTCTTCTCAGG 243 |||||| |||||||| ||| |||| ||||||||||||||| || | ||||||| |||||| Sbjct 105 GAATGGTAAGTTCTGCAAGTATCCGAAGCAAGCGAAGGCAAAAGATTTCTTCTACTCAGG 164 Query 244 CCTCAACCAGGCAGGAAGCACTAATAATAAAGTCAGATCCAACGTGACAACAGTCAATGT 303 ||||||||||||||| | ||||||||||| ||||| ||||||||||||||| |||||||| Sbjct 165 CCTCAACCAGGCAGGGACCACTAATAATAGAGTCAAATCCAACGTGACAACGGTCAATGT 224 Query 304 CGACCAGATTCCAGGGTTAAACACTATGGGAATATCCTTGGTCCGCATAGACTATGCACC 363 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct 225 CGACCAGATTCCAGGGTTAAACACTTTGGGAATATCCTTGGTCCGCATAGACTATGCGCC 284 Query 364 ATATGGACAAAACCCGCCTCACACGCACCCTCGTGCTACTGAGATCCTTGTCCTTATCGA 423 |||||||||||||| |||||||||||||| |||||||||||||||||||| ||| |||| Sbjct 285 TTATGGACAAAACCCACCTCACACGCACCCGCGTGCTACTGAGATCCTTGTTCTTGTCGA 344 Query 424 GGGAACGTTATATGTTGGTTTTGTCTCTTCCAATCAAGACAATAACCGTCTATTCGCCAA 483 |||||| || ||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct 345 GGGAACTTTGTATGTAGGTTTTGTCTCTTCCAATCAAGACAATAACCGTTTATTCGCCAA 404 Query 484 AGTTCTGTACCCGGGTGACGTGTTTGTGTTTCCCATAGGAATGATCCATTTTCAAGTGAA 543 ||| ||| |||| || |||||||| |||||||| || ||||||||| ||||||||||||| Sbjct 405 AGTGCTGAACCCCGGCGACGTGTTCGTGTTTCCTATTGGAATGATCTATTTTCAAGTGAA 464 Query 544 TATCGGGAAA-ACGCCTGCGGTGGCCTTCGCTGGA 577 |||||| ||| || || || |||||||| | |||| Sbjct 465 TATCGG-AAAGACCCC-GCAGTGGCCTTTGTTGGA 497 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 30879562770 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5