BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G39110.1 Length=669 Score E Sequences producing significant alignments: (Bits) Value Ahg891829 jgi|Araly1|891829|Al_scaffold_0007_3815 970 0.0 Ahg891828 jgi|Araly1|891828|Al_scaffold_0007_3814 965 0.0 Ahg891952 jgi|Araly1|891952|Al_scaffold_0007_3938 937 0.0 Ahg891830 jgi|Araly1|891830|Al_scaffold_0007_3816 898 0.0 Ahg494078 jgi|Araly1|494078|fgenesh2_kg.7__3511__AT5G39100.1 791 0.0 Ahg891827 jgi|Araly1|891827|Al_scaffold_0007_3813 689 0.0 Ahg891831 jgi|Araly1|891831|Al_scaffold_0007_3817 617 2e-176 Ahg494073 jgi|Araly1|494073|fgenesh2_kg.7__3506__AT5G39130.1 484 3e-136 > Ahg891829 jgi|Araly1|891829|Al_scaffold_0007_3815 Length=669 Score = 970 bits (525), Expect = 0.0 Identities = 621/669 (93%), Gaps = 0/669 (0%) Strand=Plus/Plus Query 1 ATGAGGTTTTCCAAGTCTCTCATCCTGATTACCTTATCGGCTTTGGTCATTTCCTTTGCC 60 |||||| || ||| ||||||| || |||||||| |||||||||||||||||||||||| | Sbjct 1 ATGAGGGTTCCCATGTCTCTCGTCTTGATTACCATATCGGCTTTGGTCATTTCCTTTGGC 60 Query 61 GAAGCTAATGATCCAAGTCCACTTCAAGACTTTTGTGTGGCCATTGGCGACCTCAAAAAT 120 |||||| |||||||||||||||||||||||| |||||||||||| | |||||||||||| Sbjct 61 GAAGCTTCTGATCCAAGTCCACTTCAAGACTTCTGTGTGGCCATTAGTGACCTCAAAAAT 120 Query 121 GGTGTTTTTGTGAATGGTAAGTTTTGCAAGGATCCAAAGCAAGCAAAGGCAGAAGATTTC 180 ||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||| Sbjct 121 GGTGTTTTTGTGAATGGTAAGTTCTGCAAGGATCCGAAGCAAGCGAAGGCAGAAGATTTC 180 Query 181 TTTTACTCAGGCCTCAACCAAGCAGGAACCACTAATAATAAAGTCAAATCCAACGTGACA 240 || ||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||| Sbjct 181 TTCTACTCAGGCCTCAACCAGGCAGGGACCACTAATAATAGAGTCAAATCCAACGTGACA 240 Query 241 ACAGTCAATGTCGATCAGATTCCAGGGTTAAACACTTTGGGAATATCCTTGGTCCGCATA 300 || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 ACGGTCAATGTCGACCAGATTCCAGGGTTAAACACTTTGGGAATATCCTTGGTCCGCATA 300 Query 301 GACTATGCGCCATATGGTCAAAACCCGCCTCACACACACCCTCGTGCCACTGAGATCCTT 360 |||||||| || ||||| |||||||| |||||||| |||||||||||||||||||||||| Sbjct 301 GACTATGCACCTTATGGACAAAACCCACCTCACACGCACCCTCGTGCCACTGAGATCCTT 360 Query 361 GTTCTTGTTGAGGGAACATTATATGTTGGTTTTGTCTCTTCCAATCAAGACAACAACCGT 420 |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 361 GTTCTTGTCGAGGGAACATTATATGTTGGTTTTGTCTCTTCCAATCAAGACAATAACCGT 420 Query 421 TTATTCGCTAAAGTGCTGAACCCGGGCGACGTGTTTGTGTTCCCCATAGGAATGATCCAT 480 |||||| | |||||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct 421 TTATTCACCAAAGTGCTGAACCCCGGCGACGTGTTCGTGTTCCCCATAGGAATGATCCAT 480 Query 481 TTTCAAGTGAATATCGGGAAGACCCCTGCAGTGGCCTTTGCTGGACTAAGTAGTCAAAAT 540 |||||||||||||||||||||||||| |||||||| |||||||||||||||||||| || Sbjct 481 TTTCAAGTGAATATCGGGAAGACCCCAGCAGTGGCTTTTGCTGGACTAAGTAGTCAGAAC 540 Query 541 GCTGGTGTCATCACGATTGCAGATACTGTGTTTGGGTCAACGCCTCCGATTAATCCAGAT 600 |||||||| |||||||| ||||| |||||||| ||||||||||| ||||||||||||||| Sbjct 541 GCTGGTGTTATCACGATCGCAGACACTGTGTTCGGGTCAACGCCCCCGATTAATCCAGAT 600 Query 601 ATTTTGGCTCAGGCGTTTCAGTTAGACGTCAATGTTGTTAAAGACCTTGAGGCCAAGTTT 660 ||| | |||||||||||||||||||| ||||||||||| || || ||||| ||||||||| Sbjct 601 ATTCTCGCTCAGGCGTTTCAGTTAGATGTCAATGTTGTCAAGGATCTTGAAGCCAAGTTT 660 Query 661 AAAAACTAA 669 ||||||||| Sbjct 661 AAAAACTAA 669 > Ahg891828 jgi|Araly1|891828|Al_scaffold_0007_3814 Length=669 Score = 965 bits (522), Expect = 0.0 Identities = 620/669 (93%), Gaps = 0/669 (0%) Strand=Plus/Plus Query 1 ATGAGGTTTTCCAAGTCTCTCATCCTGATTACCTTATCGGCTTTGGTCATTTCCTTTGCC 60 |||||| || ||| ||||||| || ||||||| |||||||||||||||||||||||||| Sbjct 1 ATGAGGGTTCCCATGTCTCTCGTCTTGATTACAATATCGGCTTTGGTCATTTCCTTTGCC 60 Query 61 GAAGCTAATGATCCAAGTCCACTTCAAGACTTTTGTGTGGCCATTGGCGACCTCAAAAAT 120 |||||| |||||||||||||||||||||||| || ||||||||||| |||||||||||| Sbjct 61 GAAGCTTCTGATCCAAGTCCACTTCAAGACTTCTGCGTGGCCATTGGTGACCTCAAAAAT 120 Query 121 GGTGTTTTTGTGAATGGTAAGTTTTGCAAGGATCCAAAGCAAGCAAAGGCAGAAGATTTC 180 ||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||| Sbjct 121 GGTGTTTTTGTGAATGGTAAGTTCTGCAAGGATCCGAAGCAAGCGAAGGCAGAAGATTTC 180 Query 181 TTTTACTCAGGCCTCAACCAAGCAGGAACCACTAATAATAAAGTCAAATCCAACGTGACA 240 || ||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||| Sbjct 181 TTCTACTCAGGCCTCAACCAGGCAGGGACCACTAATAATAGAGTCAAATCCAACGTGACA 240 Query 241 ACAGTCAATGTCGATCAGATTCCAGGGTTAAACACTTTGGGAATATCCTTGGTCCGCATA 300 || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 ACGGTCAATGTCGACCAGATTCCAGGGTTAAACACTTTGGGAATATCCTTGGTCCGCATA 300 Query 301 GACTATGCGCCATATGGTCAAAACCCGCCTCACACACACCCTCGTGCCACTGAGATCCTT 360 |||||||| || ||||| |||||||| |||||||| |||||||||||||||||||||||| Sbjct 301 GACTATGCACCTTATGGACAAAACCCACCTCACACGCACCCTCGTGCCACTGAGATCCTT 360 Query 361 GTTCTTGTTGAGGGAACATTATATGTTGGTTTTGTCTCTTCCAATCAAGACAACAACCGT 420 |||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct 361 GTTCTTGTCGAGGGAACATTATATGTTGGTTTTGTTTCTTCCAATCAAGACAATAACCGT 420 Query 421 TTATTCGCTAAAGTGCTGAACCCGGGCGACGTGTTTGTGTTCCCCATAGGAATGATCCAT 480 |||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct 421 TTATTCGCCAAAGTGCTGAACCCCGGCGACGTGTTCGTGTTCCCCATAGGAATGATCCAT 480 Query 481 TTTCAAGTGAATATCGGGAAGACCCCTGCAGTGGCCTTTGCTGGACTAAGTAGTCAAAAT 540 |||||||||||||||||||||||||| |||||||| |||||||||||||||||||| || Sbjct 481 TTTCAAGTGAATATCGGGAAGACCCCAGCAGTGGCTTTTGCTGGACTAAGTAGTCAGAAC 540 Query 541 GCTGGTGTCATCACGATTGCAGATACTGTGTTTGGGTCAACGCCTCCGATTAATCCAGAT 600 |||||||| |||||||| ||||| |||||||| ||||||||||| ||||||||||||||| Sbjct 541 GCTGGTGTTATCACGATCGCAGACACTGTGTTCGGGTCAACGCCCCCGATTAATCCAGAT 600 Query 601 ATTTTGGCTCAGGCGTTTCAGTTAGACGTCAATGTTGTTAAAGACCTTGAGGCCAAGTTT 660 ||| | |||||||||||||||||||| ||||||||||| || || ||||| || |||||| Sbjct 601 ATTCTCGCTCAGGCGTTTCAGTTAGATGTCAATGTTGTCAAGGATCTTGAAGCGAAGTTT 660 Query 661 AAAAACTAA 669 ||||||||| Sbjct 661 AAAAACTAA 669 > Ahg891952 jgi|Araly1|891952|Al_scaffold_0007_3938 Length=669 Score = 937 bits (507), Expect = 0.0 Identities = 618/672 (92%), Gaps = 6/672 (1%) Strand=Plus/Plus Query 1 ATGAGGTTTTCCAAGTCTCTCATCCTGATTACCTTATCGGCTTTGGTCATTTCCTTTGCC 60 |||||| || ||| || |||| || |||||||| |||||||||||||||||||||||||| Sbjct 1 ATGAGGGTTCCCATGTTTCTCGTCTTGATTACCATATCGGCTTTGGTCATTTCCTTTGCC 60 Query 61 GAAGCTAATGATCCAAGTCCACTTCAAGACTTTTGTGTGGCCATTGGCGACCTCAAAAAT 120 |||||||||||||||||||||||||||||||| |||||||||||||| ||||| || ||| Sbjct 61 GAAGCTAATGATCCAAGTCCACTTCAAGACTTCTGTGTGGCCATTGGTGACCTTAAGAAT 120 Query 121 GGTGTTTTTGTGAATGGTAAGTTTTGCAAGGATCCAAAGCAAGCAAAGGCAGAAGATTTC 180 |||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||| Sbjct 121 GGTGTTTTTGTGAATGGTAAGTTTTGTAAGGATCCGAAGCAAGCGAAGGCAGAAGATTTC 180 Query 181 TT-TTACTCA-GGCCTCAACCAAG-CAGGAACCACTAATAATAAAGTCAAATCCAACGTG 237 || || | || ||||||||| ||| |||||| ||||| ||||| |||||||||||||||| Sbjct 181 TTCTT-C-CAAGGCCTCAAC-AAGGCAGGAAACACTACTAATAGAGTCAAATCCAACGTG 237 Query 238 ACAACAGTCAATGTCGATCAGATTCCAGGGTTAAACACTTTGGGAATATCCTTGGTCCGC 297 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct 238 ACAACAGTCAATGTCGACCAGATTCCCGGGTTAAACACTTTGGGAATATCCTTGGTCCGC 297 Query 298 ATAGACTATGCGCCATATGGTCAAAACCCGCCTCACACACACCCTCGTGCCACTGAGATC 357 |||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct 298 ATAGACTATGCGCCTTATGGACAAAACCCGCCTCACACGCACCCTCGTGCCACTGAGATC 357 Query 358 CTTGTTCTTGTTGAGGGAACATTATATGTTGGTTTTGTCTCTTCCAATCAAGACAACAAC 417 ||||||||||| |||||||| |||||||| ||||||||||| |||||||||||||| ||| Sbjct 358 CTTGTTCTTGTCGAGGGAACGTTATATGTAGGTTTTGTCTCCTCCAATCAAGACAATAAC 417 Query 418 CGTTTATTCGCTAAAGTGCTGAACCCGGGCGACGTGTTTGTGTTCCCCATAGGAATGATC 477 ||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct 418 CGTTTATTCGCCAAAGTGCTGAACCCCGGCGACGTGTTCGTGTTCCCCATAGGAATGATC 477 Query 478 CATTTTCAAGTGAATATCGGGAAGACCCCTGCAGTGGCCTTTGCTGGACTAAGTAGTCAA 537 ||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct 478 CATTTCCAAGTGAATATCGGGAAGACCCCTGCAGTGGCTTTTGCTGGACTAAATAGTCAG 537 Query 538 AATGCTGGTGTCATCACGATTGCAGATACTGTGTTTGGGTCAACGCCTCCGATTAATCCA 597 || |||||||| |||||||| ||||| |||||||| ||||||||||| || ||||||||| Sbjct 538 AACGCTGGTGTTATCACGATCGCAGACACTGTGTTCGGGTCAACGCCCCCAATTAATCCA 597 Query 598 GATATTTTGGCTCAGGCGTTTCAGTTAGACGTCAATGTTGTTAAAGACCTTGAGGCCAAG 657 |||||| | |||||||||||||||||||| ||||||||||| || || ||||| |||||| Sbjct 598 GATATTCTCGCTCAGGCGTTTCAGTTAGATGTCAATGTTGTCAAGGATCTTGAAGCCAAG 657 Query 658 TTTAAAAACTAA 669 |||||||||||| Sbjct 658 TTTAAAAACTAA 669 > Ahg891830 jgi|Araly1|891830|Al_scaffold_0007_3816 Length=669 Score = 898 bits (486), Expect = 0.0 Identities = 611/672 (91%), Gaps = 6/672 (1%) Strand=Plus/Plus Query 1 ATGAGGTTTTCCAAGTCTCTCATCCTGATTACCTTATCGGCTTTGGTCATTTCCTTTGCC 60 |||||| || ||| ||||||| || |||||||| |||| ||||||||||||||||||||| Sbjct 1 ATGAGGGTTCCCATGTCTCTCGTCTTGATTACCATATCAGCTTTGGTCATTTCCTTTGCC 60 Query 61 GAAGCTAATGATCCAAGTCCACTTCAAGACTTTTGTGTGGCCATTGGCGACCTCAAAAAT 120 |||||| |||||||||||||||||||||||| || ||||||||||| |||||||||||| Sbjct 61 GAAGCTTCTGATCCAAGTCCACTTCAAGACTTCTGCGTGGCCATTGGTGACCTCAAAAAT 120 Query 121 GGTGTTTTTGTGAATGGTAAGTTTTGCAAGGATCCAAAGCAAGCAAAGGCAGAAGATTTC 180 ||||||||||||||||||||||| || |||||||| |||||||| ||||||||||||||| Sbjct 121 GGTGTTTTTGTGAATGGTAAGTTCTGTAAGGATCCGAAGCAAGCGAAGGCAGAAGATTTC 180 Query 181 TT-TTACT-CAGGCCTCAACCAA-GCAGGAACCACTAATAATAAAGTCAAATCCAACGTG 237 || || | |||||||||| ||| ||||||| ||||| |||| |||||||||||||||| Sbjct 181 TTCTT--TGCAGGCCTCAA-CAAGGCAGGAAACACTACCAATAGAGTCAAATCCAACGTG 237 Query 238 ACAACAGTCAATGTCGATCAGATTCCAGGGTTAAACACTTTGGGAATATCCTTGGTCCGC 297 ||||| ||||||||||| |||||||| ||||||||||| ||||||||||||||||||||| Sbjct 238 ACAACGGTCAATGTCGACCAGATTCCCGGGTTAAACACATTGGGAATATCCTTGGTCCGC 297 Query 298 ATAGACTATGCGCCATATGGTCAAAACCCGCCTCACACACACCCTCGTGCCACTGAGATC 357 |||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct 298 ATAGACTATGCGCCTTATGGACAAAACCCGCCTCACACGCACCCTCGTGCCACTGAGATC 357 Query 358 CTTGTTCTTGTTGAGGGAACATTATATGTTGGTTTTGTCTCTTCCAATCAAGACAACAAC 417 ||||||||||| |||||||| |||||||| |||||||||||||||||||||||||| ||| Sbjct 358 CTTGTTCTTGTCGAGGGAACGTTATATGTAGGTTTTGTCTCTTCCAATCAAGACAATAAC 417 Query 418 CGTTTATTCGCTAAAGTGCTGAACCCGGGCGACGTGTTTGTGTTCCCCATAGGAATGATC 477 ||||||||||| |||||||||||||| ||||||||||| ||||||||||| ||||||||| Sbjct 418 CGTTTATTCGCCAAAGTGCTGAACCCCGGCGACGTGTTCGTGTTCCCCATTGGAATGATC 477 Query 478 CATTTTCAAGTGAATATCGGGAAGACCCCTGCAGTGGCCTTTGCTGGACTAAGTAGTCAA 537 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 478 CATTTTCAAGTGAATATCGGGAAGACCCCCGCAGTGGCCTTTGCTGGACTAAGTAGTCAG 537 Query 538 AATGCTGGTGTCATCACGATTGCAGATACTGTGTTTGGGTCAACGCCTCCGATTAATCCA 597 || |||||||| |||| ||| ||||| |||||||| ||||||||||| || ||||||||| Sbjct 538 AACGCTGGTGTTATCATGATCGCAGACACTGTGTTCGGGTCAACGCCCCCAATTAATCCA 597 Query 598 GATATTTTGGCTCAGGCGTTTCAGTTAGACGTCAATGTTGTTAAAGACCTTGAGGCCAAG 657 |||||| | |||||||| |||||| |||| ||||| ||||| || || ||||| |||||| Sbjct 598 GATATTCTCGCTCAGGCATTTCAGCTAGATGTCAACGTTGTCAAGGATCTTGAAGCCAAG 657 Query 658 TTTAAAAACTAA 669 |||||||||||| Sbjct 658 TTTAAAAACTAA 669 > Ahg494078 jgi|Araly1|494078|fgenesh2_kg.7__3511__AT5G39100.1 Length=658 Score = 791 bits (428), Expect = 0.0 Identities = 507/546 (93%), Gaps = 2/546 (0%) Strand=Plus/Plus Query 125 TTTTTGTGAATGGTAAGTTTTGCAAGGATCCAAAGCAAGCAAAGGCAGAAGATTTCTT-T 183 ||||||||||||||||||| || |||||||| |||||||| ||||||||||||||||| | Sbjct 1 TTTTTGTGAATGGTAAGTTCTGTAAGGATCCGAAGCAAGCCAAGGCAGAAGATTTCTTCT 60 Query 184 TACTCAGGCCTCAACCAAGCAGGAACCACTAATAATAAAGTCAAATCCAACGTGACAACA 243 | ||||||||||||||| ||||||| |||| |||||||||||| ||||||||||||||| Sbjct 61 T-CTCAGGCCTCAACCAGGCAGGAAACACTGATAATAAAGTCAGATCCAACGTGACAACG 119 Query 244 GTCAATGTCGATCAGATTCCAGGGTTAAACACTTTGGGAATATCCTTGGTCCGCATAGAC 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 120 GTCAATGTCGATCAGATTCCAGGGTTAAACACTTTGGGAATATCCTTGGTCCGCATAGAC 179 Query 304 TATGCGCCATATGGTCAAAACCCGCCTCACACACACCCTCGTGCCACTGAGATCCTTGTT 363 |||||||| ||||| ||||||||||||||||| ||||| ||||| ||||||||||||||| Sbjct 180 TATGCGCCGTATGGACAAAACCCGCCTCACACGCACCCGCGTGCTACTGAGATCCTTGTT 239 Query 364 CTTGTTGAGGGAACATTATATGTTGGTTTTGTCTCTTCCAATCAAGACAACAACCGTTTA 423 ||||| |||||||| |||||||| || ||||||||||||||||||||||| ||||||||| Sbjct 240 CTTGTCGAGGGAACGTTATATGTCGGGTTTGTCTCTTCCAATCAAGACAATAACCGTTTA 299 Query 424 TTCGCTAAAGTGCTGAACCCGGGCGACGTGTTTGTGTTCCCCATAGGAATGATCCATTTT 483 ||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct 300 TTCGCCAAAGTGCTGAACCCCGGCGACGTGTTCGTGTTCCCCATAGGAATGATCCATTTT 359 Query 484 CAAGTGAATATCGGGAAGACCCCTGCAGTGGCCTTTGCTGGACTAAGTAGTCAAAATGCT 543 ||||||||||||||||||||||| ||| |||||||||||||| | |||||||| || ||| Sbjct 360 CAAGTGAATATCGGGAAGACCCCCGCAATGGCCTTTGCTGGATTGAGTAGTCAGAACGCT 419 Query 544 GGTGTCATCACGATTGCAGATACTGTGTTTGGGTCAACGCCTCCGATTAATCCAGATATT 603 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 420 GGTGTTATCACGATCGCAGATACTGTGTTTGGGTCAACGCCTCCGATTAATCCATATATT 479 Query 604 TTGGCTCAGGCGTTTCAGTTAGACGTCAATGTTGTTAAAGACCTTGAGGCCAAGTTTAAA 663 | |||||||| ||||||||||| ||||||||||| || ||||||||||||||||||||| Sbjct 480 CTAGCTCAGGCATTTCAGTTAGATGTCAATGTTGTCAAGGACCTTGAGGCCAAGTTTAAA 539 Query 664 AACTAA 669 |||||| Sbjct 540 AACTAA 545 > Ahg891827 jgi|Araly1|891827|Al_scaffold_0007_3813 Length=672 Score = 689 bits (373), Expect = 0.0 Identities = 542/623 (87%), Gaps = 13/623 (2%) Strand=Plus/Plus Query 43 TTGGTCATTTCCTTTGCCGAA-GCTAATGATCCAAGTCCACTTCAAGACTTTTGTGTGGC 101 ||||||||| ||||| || || ||| ||||||| |||||||| |||||||| |||||||| Sbjct 43 TTGGTCATTCCCTTTTCC-AATGCTTATGATCCGAGTCCACTCCAAGACTTCTGTGTGGC 101 Query 102 CATTGGCGACCTCAAAAATGGTGTTTTTGTGAATGGTAAGTTTTGCAAGGATCCAAAGCA 161 | |||| ||||||| || ||||||||||||||||||||| || |||||||||||||| Sbjct 102 CGTTGGTAACCTCAACAA---TGTTTTTGTGAATGGTAAGTTCTGTAAGGATCCAAAGCA 158 Query 162 AGCAAAGGCAGAAGATTTCTTTTACTCAGGCCTCAACCAA-GCAGGAACCACTAATAATA 220 ||| ||||| ||||| ||||| |||||||| ||||| ||| || |||| ||| ||||||| Sbjct 159 AGCGAAGGCGGAAGACTTCTTCTACTCAGGTCTCAA-CAAGGCCGGAAGCACCAATAATA 217 Query 221 AAGTCAAATCCAACGTGACAACAGTCAATGTCGATCAGATTCCAGGGTTAAACACTTTGG 280 | |||||||||||||| |||||||| ||||| ||||||||||||||| |||||||| ||| Sbjct 218 ATGTCAAATCCAACGTCACAACAGTGAATGTTGATCAGATTCCAGGGCTAAACACTATGG 277 Query 281 GAATATCCTTGGTCCGCATAGACTATGCGCCATATGGTCAAAACCCGCCTCACACACACC 340 ||||||| ||||| ||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct 278 GAATATCATTGGTTCGCATAGACTATGCGCCTTATGGCCAAAACCCGCCTCACACACACC 337 Query 341 CTCGTGCCACTGAGATCCTTGTTCTTGTTGAGGGAACATTATATGTTGGTTTTGTCTCTT 400 | ||||||||||| |||||||| ||||| |||||||| ||||||||||| |||||||||| Sbjct 338 CGCGTGCCACTGAAATCCTTGTCCTTGTCGAGGGAACGTTATATGTTGGGTTTGTCTCTT 397 Query 401 CCAATCAAGACAACAACCGT-TTATTCGCTAAAGTGCTGAACCCGGGCGACGTGTTTGTG 459 ||||||||||||| |||||| || ||||| ||| | || |||| || || ||||| ||| Sbjct 398 CCAATCAAGACAATAACCGTCTT-TTCGCCAAAATTTTGCACCCCGGTGATGTGTTCGTG 456 Query 460 TTCCCCATAGGAATGATCCATTTTCAAGTGAATATCGGGAAGACCCCTGCAGTGGCCTTT 519 ||||||||||| ||||| ||||||||||||||||||||||||||||| || || |||||| Sbjct 457 TTCCCCATAGGGATGATTCATTTTCAAGTGAATATCGGGAAGACCCCCGCGGTTGCCTTT 516 Query 520 GCTGGACTAAGTAGTCAAAATGCTGGTGTCATCACGATTGCAGATACTGTGTTTGGGTC- 578 || ||||| |||||||| || |||||||||||||| |||||| | ||||||||||| || Sbjct 517 GCCGGACTTAGTAGTCAGAACGCTGGTGTCATCACAATTGCAAACACTGTGTTTGGTTCG 576 Query 579 AACGCCTCCGATTAATCCAGATATTT-TGGCTCAGGCGTTTCAGTTAGACGTCAATGTTG 637 || ||||| ||| ||||||| | || |||||||||| ||||||||||| || ||||| | Sbjct 577 AAA-CCTCCCATTTATCCAGA-AGTTCTGGCTCAGGCATTTCAGTTAGATGTGAATGTCG 634 Query 638 TTAAAGACCTTGAGGCCAAGTTT 660 | ||||||||||||||||||||| Sbjct 635 TCAAAGACCTTGAGGCCAAGTTT 657 > Ahg891831 jgi|Araly1|891831|Al_scaffold_0007_3817 Length=501 Score = 617 bits (334), Expect = 2e-176 Identities = 417/457 (91%), Gaps = 5/457 (1%) Strand=Plus/Plus Query 77 GTCCACTTCAAGACTTTTGTGTGGCCATTGGCGACCTCAAAAATGGT-G---TTTTTGTG 132 |||||||||||||||| || ||||||||| | ||||||||||||||| | |||||||| Sbjct 46 GTCCACTTCAAGACTTCTGCGTGGCCATTAGTGACCTCAAAAATGGTGGTAATTTTTGTG 105 Query 133 AATGGTAAGTTTTGCAAGGATCCAAAGCAAGCAAAGGCAGAAGATTTCTTTTACTCAGGC 192 ||||||||||| |||||| |||| |||||||| |||||| |||||||||| ||||||||| Sbjct 106 AATGGTAAGTTCTGCAAGTATCCGAAGCAAGCGAAGGCAAAAGATTTCTTCTACTCAGGC 165 Query 193 CTCAACCAAGCAGGAACCACTAATAATAAAGTCAAATCCAACGTGACAACAGTCAATGTC 252 |||||||| ||||| ||||||||||||| ||||||||||||||||||||| ||||||||| Sbjct 166 CTCAACCAGGCAGGGACCACTAATAATAGAGTCAAATCCAACGTGACAACGGTCAATGTC 225 Query 253 GATCAGATTCCAGGGTTAAACACTTTGGGAATATCCTTGGTCCGCATAGACTATGCGCCA 312 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 226 GACCAGATTCCAGGGTTAAACACTTTGGGAATATCCTTGGTCCGCATAGACTATGCGCCT 285 Query 313 TATGGTCAAAACCCGCCTCACACACACCCTCGTGCCACTGAGATCCTTGTTCTTGTTGAG 372 ||||| |||||||| |||||||| ||||| ||||| |||||||||||||||||||| ||| Sbjct 286 TATGGACAAAACCCACCTCACACGCACCCGCGTGCTACTGAGATCCTTGTTCTTGTCGAG 345 Query 373 GGAACATTATATGTTGGTTTTGTCTCTTCCAATCAAGACAACAACCGTTTATTCGCTAAA 432 ||||| || ||||| |||||||||||||||||||||||||| |||||||||||||| ||| Sbjct 346 GGAACTTTGTATGTAGGTTTTGTCTCTTCCAATCAAGACAATAACCGTTTATTCGCCAAA 405 Query 433 GTGCTGAACCCGGGCGACGTGTTTGTGTTCCCCATAGGAATGATCCATTTTCAAGTGAAT 492 ||||||||||| ||||||||||| ||||| || || ||||||||| |||||||||||||| Sbjct 406 GTGCTGAACCCCGGCGACGTGTTCGTGTTTCCTATTGGAATGATCTATTTTCAAGTGAAT 465 Query 493 ATCGGGAAGACCCCTGCAGTGGCCTTTGCTGGACTAA 529 ||||| |||||||| ||||||||||||| |||||||| Sbjct 466 ATCGGAAAGACCCC-GCAGTGGCCTTTGTTGGACTAA 501 > Ahg494073 jgi|Araly1|494073|fgenesh2_kg.7__3506__AT5G39130.1 Length=741 Score = 484 bits (262), Expect = 3e-136 Identities = 540/672 (80%), Gaps = 27/672 (4%) Strand=Plus/Plus Query 1 ATGA-GGTTTTC-CAAGTCTCTCAT-CCTGATTACC-TTATCGGCTTTGGTCATTTCCTT 56 |||| || |||| ||| |||||||| ||| ||| || | || |||| ||||||||||| Sbjct 39 ATGATGG-TTTCTCAA-TCTCTCATCCCT-ATTGCCATAAT-TTCTTTAGTCATTTCCTT 94 Query 57 TGCCGAA-GCTAATGATCCAAGTCCACTTCAAGACTTTTGTGTGGCCATTGGCGACCTCA 115 |||| || ||| |||||||||||||||| |||||||| ||||| ||||||| ||||| Sbjct 95 TGCC-AATGCTTATGATCCAAGTCCACTCCAAGACTTCTGTGTTGCCATTGATGACCT-- 151 Query 116 AAAATGGTGTTTTTGTGAATGGTAAGTTTTGCAAGGATCCAAAGCAAG-CAAAGGCAGAA 174 |||| || ||||||||||| |||| |||||| || || || |||| || | | ||| || Sbjct 152 AAAA-GGCGTTTTTGTGAACGGTAGGTTTTGTAAAGACCCGAAGCGAGTC-GATGCAAAA 209 Query 175 GATTTCTTT-TACTCAGGCCTCAAC-CAAGCAGGAACCACTAATAATAAAGTCAAATCCA 232 ||||| ||| | ||||||||||||| | | |||| ||| ||||| |||| || | Sbjct 210 GATTT-TTTCTTCTCAGGCCTCAACGTACCCGGGAA-CACGGATAATCAAGTTGGCTCTA 267 Query 233 ACGTGACAACAGTCAATGTCGATCAGATTCCAGGGTTAAACACTTTGGGAATATCCTTGG 292 | ||||| | || ||||| |||||||| |||||| ||||||| |||||||||| |||| Sbjct 268 ATGTGACCATTGTAAATGTTGATCAGATCCCAGGGCTAAACACCATGGGAATATCATTGG 327 Query 293 TCCGCATAGACTATGCGCCAT-ATGGTCAAAACCCGCCTCACACACACCCTCGTGCCACT 351 ||||||||||||| || || | |||| ||||| || |||||||| |||||||||| | | Sbjct 328 TCCGCATAGACTACGCACC-TCATGGCCAAAATCCACCTCACACGCACCCTCGTGGCTCA 386 Query 352 GAGATCCTTGTTCTTGTTGAGGGAACATTATATGTTGGTTTTGTCTCTTCCAATCAAGAC 411 ||||||||||| ||||| | ||||||||||| || ||||||||||| ||||||||||| Sbjct 387 GAGATCCTTGTCCTTGTCAAAGGAACATTATACGTCGGTTTTGTCTCATCCAATCAAGAT 446 Query 412 AACAACCGTTTATTCGCTAAAGTGCTGAACCCGGGCGACGTGTTTGTGTTCCCCATAGGA 471 |||||||| |||||||| ||||| || |||| || || || |||||||||||||||||| Sbjct 447 AACAACCGGTTATTCGCCAAAGTATTGCACCCCGGTGATGTTTTTGTGTTCCCCATAGGA 506 Query 472 ATGATCCATTTTCAAGTGAATATCGGGAAGACCCCTGCAGTGGCCTTTGCTGGACTAAGT 531 |||||||||||||| || ||||||||||| | || || || || ||||| ||| | ||| Sbjct 507 ATGATCCATTTTCAGGTAAATATCGGGAAAATTCCAGCCGTTGCTTTTGCGGGATTGAGT 566 Query 532 AGTCAAAATGCTGGTGTCATCACGATTGCAGATACTGTGTTTGGGTCAA-CGCCTCCGAT 590 ||||| || |||||||||||||| || ||| | ||||| |||||||||| | ||||| || Sbjct 567 AGTCAGAACGCTGGTGTCATCACAATCGCAAACACTGTTTTTGGGTCAAAC-CCTCCAAT 625 Query 591 TAATCCAGATATTTTGGCTCAGG-CGTTTCAGTTAGACGTCAA-TGTTGTTAAAGACCTT 648 | ||||||| || | || |||| | || | ||| || | ||| |||||| ||||| ||| Sbjct 626 TTATCCAGAGCTTCTCGC-CAGGGCATTCCGGTTGGATG-CAAGTGTTGTCAAAGAACTT 683 Query 649 GAGGCCAAGTTT 660 ||||||||||| Sbjct 684 CAGGCCAAGTTT 695 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 24551158548 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5