BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G39110.1
Length=669
Score E
Sequences producing significant alignments: (Bits) Value
Ahg891829 jgi|Araly1|891829|Al_scaffold_0007_3815 970 0.0
Ahg891828 jgi|Araly1|891828|Al_scaffold_0007_3814 965 0.0
Ahg891952 jgi|Araly1|891952|Al_scaffold_0007_3938 937 0.0
Ahg891830 jgi|Araly1|891830|Al_scaffold_0007_3816 898 0.0
Ahg494078 jgi|Araly1|494078|fgenesh2_kg.7__3511__AT5G39100.1 791 0.0
Ahg891827 jgi|Araly1|891827|Al_scaffold_0007_3813 689 0.0
Ahg891831 jgi|Araly1|891831|Al_scaffold_0007_3817 617 2e-176
Ahg494073 jgi|Araly1|494073|fgenesh2_kg.7__3506__AT5G39130.1 484 3e-136
> Ahg891829 jgi|Araly1|891829|Al_scaffold_0007_3815
Length=669
Score = 970 bits (525), Expect = 0.0
Identities = 621/669 (93%), Gaps = 0/669 (0%)
Strand=Plus/Plus
Query 1 ATGAGGTTTTCCAAGTCTCTCATCCTGATTACCTTATCGGCTTTGGTCATTTCCTTTGCC 60
|||||| || ||| ||||||| || |||||||| |||||||||||||||||||||||| |
Sbjct 1 ATGAGGGTTCCCATGTCTCTCGTCTTGATTACCATATCGGCTTTGGTCATTTCCTTTGGC 60
Query 61 GAAGCTAATGATCCAAGTCCACTTCAAGACTTTTGTGTGGCCATTGGCGACCTCAAAAAT 120
|||||| |||||||||||||||||||||||| |||||||||||| | ||||||||||||
Sbjct 61 GAAGCTTCTGATCCAAGTCCACTTCAAGACTTCTGTGTGGCCATTAGTGACCTCAAAAAT 120
Query 121 GGTGTTTTTGTGAATGGTAAGTTTTGCAAGGATCCAAAGCAAGCAAAGGCAGAAGATTTC 180
||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||
Sbjct 121 GGTGTTTTTGTGAATGGTAAGTTCTGCAAGGATCCGAAGCAAGCGAAGGCAGAAGATTTC 180
Query 181 TTTTACTCAGGCCTCAACCAAGCAGGAACCACTAATAATAAAGTCAAATCCAACGTGACA 240
|| ||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||
Sbjct 181 TTCTACTCAGGCCTCAACCAGGCAGGGACCACTAATAATAGAGTCAAATCCAACGTGACA 240
Query 241 ACAGTCAATGTCGATCAGATTCCAGGGTTAAACACTTTGGGAATATCCTTGGTCCGCATA 300
|| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 ACGGTCAATGTCGACCAGATTCCAGGGTTAAACACTTTGGGAATATCCTTGGTCCGCATA 300
Query 301 GACTATGCGCCATATGGTCAAAACCCGCCTCACACACACCCTCGTGCCACTGAGATCCTT 360
|||||||| || ||||| |||||||| |||||||| ||||||||||||||||||||||||
Sbjct 301 GACTATGCACCTTATGGACAAAACCCACCTCACACGCACCCTCGTGCCACTGAGATCCTT 360
Query 361 GTTCTTGTTGAGGGAACATTATATGTTGGTTTTGTCTCTTCCAATCAAGACAACAACCGT 420
|||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 361 GTTCTTGTCGAGGGAACATTATATGTTGGTTTTGTCTCTTCCAATCAAGACAATAACCGT 420
Query 421 TTATTCGCTAAAGTGCTGAACCCGGGCGACGTGTTTGTGTTCCCCATAGGAATGATCCAT 480
|||||| | |||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 421 TTATTCACCAAAGTGCTGAACCCCGGCGACGTGTTCGTGTTCCCCATAGGAATGATCCAT 480
Query 481 TTTCAAGTGAATATCGGGAAGACCCCTGCAGTGGCCTTTGCTGGACTAAGTAGTCAAAAT 540
|||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||
Sbjct 481 TTTCAAGTGAATATCGGGAAGACCCCAGCAGTGGCTTTTGCTGGACTAAGTAGTCAGAAC 540
Query 541 GCTGGTGTCATCACGATTGCAGATACTGTGTTTGGGTCAACGCCTCCGATTAATCCAGAT 600
|||||||| |||||||| ||||| |||||||| ||||||||||| |||||||||||||||
Sbjct 541 GCTGGTGTTATCACGATCGCAGACACTGTGTTCGGGTCAACGCCCCCGATTAATCCAGAT 600
Query 601 ATTTTGGCTCAGGCGTTTCAGTTAGACGTCAATGTTGTTAAAGACCTTGAGGCCAAGTTT 660
||| | |||||||||||||||||||| ||||||||||| || || ||||| |||||||||
Sbjct 601 ATTCTCGCTCAGGCGTTTCAGTTAGATGTCAATGTTGTCAAGGATCTTGAAGCCAAGTTT 660
Query 661 AAAAACTAA 669
|||||||||
Sbjct 661 AAAAACTAA 669
> Ahg891828 jgi|Araly1|891828|Al_scaffold_0007_3814
Length=669
Score = 965 bits (522), Expect = 0.0
Identities = 620/669 (93%), Gaps = 0/669 (0%)
Strand=Plus/Plus
Query 1 ATGAGGTTTTCCAAGTCTCTCATCCTGATTACCTTATCGGCTTTGGTCATTTCCTTTGCC 60
|||||| || ||| ||||||| || ||||||| ||||||||||||||||||||||||||
Sbjct 1 ATGAGGGTTCCCATGTCTCTCGTCTTGATTACAATATCGGCTTTGGTCATTTCCTTTGCC 60
Query 61 GAAGCTAATGATCCAAGTCCACTTCAAGACTTTTGTGTGGCCATTGGCGACCTCAAAAAT 120
|||||| |||||||||||||||||||||||| || ||||||||||| ||||||||||||
Sbjct 61 GAAGCTTCTGATCCAAGTCCACTTCAAGACTTCTGCGTGGCCATTGGTGACCTCAAAAAT 120
Query 121 GGTGTTTTTGTGAATGGTAAGTTTTGCAAGGATCCAAAGCAAGCAAAGGCAGAAGATTTC 180
||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||
Sbjct 121 GGTGTTTTTGTGAATGGTAAGTTCTGCAAGGATCCGAAGCAAGCGAAGGCAGAAGATTTC 180
Query 181 TTTTACTCAGGCCTCAACCAAGCAGGAACCACTAATAATAAAGTCAAATCCAACGTGACA 240
|| ||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||
Sbjct 181 TTCTACTCAGGCCTCAACCAGGCAGGGACCACTAATAATAGAGTCAAATCCAACGTGACA 240
Query 241 ACAGTCAATGTCGATCAGATTCCAGGGTTAAACACTTTGGGAATATCCTTGGTCCGCATA 300
|| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 ACGGTCAATGTCGACCAGATTCCAGGGTTAAACACTTTGGGAATATCCTTGGTCCGCATA 300
Query 301 GACTATGCGCCATATGGTCAAAACCCGCCTCACACACACCCTCGTGCCACTGAGATCCTT 360
|||||||| || ||||| |||||||| |||||||| ||||||||||||||||||||||||
Sbjct 301 GACTATGCACCTTATGGACAAAACCCACCTCACACGCACCCTCGTGCCACTGAGATCCTT 360
Query 361 GTTCTTGTTGAGGGAACATTATATGTTGGTTTTGTCTCTTCCAATCAAGACAACAACCGT 420
|||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 361 GTTCTTGTCGAGGGAACATTATATGTTGGTTTTGTTTCTTCCAATCAAGACAATAACCGT 420
Query 421 TTATTCGCTAAAGTGCTGAACCCGGGCGACGTGTTTGTGTTCCCCATAGGAATGATCCAT 480
|||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 421 TTATTCGCCAAAGTGCTGAACCCCGGCGACGTGTTCGTGTTCCCCATAGGAATGATCCAT 480
Query 481 TTTCAAGTGAATATCGGGAAGACCCCTGCAGTGGCCTTTGCTGGACTAAGTAGTCAAAAT 540
|||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||
Sbjct 481 TTTCAAGTGAATATCGGGAAGACCCCAGCAGTGGCTTTTGCTGGACTAAGTAGTCAGAAC 540
Query 541 GCTGGTGTCATCACGATTGCAGATACTGTGTTTGGGTCAACGCCTCCGATTAATCCAGAT 600
|||||||| |||||||| ||||| |||||||| ||||||||||| |||||||||||||||
Sbjct 541 GCTGGTGTTATCACGATCGCAGACACTGTGTTCGGGTCAACGCCCCCGATTAATCCAGAT 600
Query 601 ATTTTGGCTCAGGCGTTTCAGTTAGACGTCAATGTTGTTAAAGACCTTGAGGCCAAGTTT 660
||| | |||||||||||||||||||| ||||||||||| || || ||||| || ||||||
Sbjct 601 ATTCTCGCTCAGGCGTTTCAGTTAGATGTCAATGTTGTCAAGGATCTTGAAGCGAAGTTT 660
Query 661 AAAAACTAA 669
|||||||||
Sbjct 661 AAAAACTAA 669
> Ahg891952 jgi|Araly1|891952|Al_scaffold_0007_3938
Length=669
Score = 937 bits (507), Expect = 0.0
Identities = 618/672 (92%), Gaps = 6/672 (1%)
Strand=Plus/Plus
Query 1 ATGAGGTTTTCCAAGTCTCTCATCCTGATTACCTTATCGGCTTTGGTCATTTCCTTTGCC 60
|||||| || ||| || |||| || |||||||| ||||||||||||||||||||||||||
Sbjct 1 ATGAGGGTTCCCATGTTTCTCGTCTTGATTACCATATCGGCTTTGGTCATTTCCTTTGCC 60
Query 61 GAAGCTAATGATCCAAGTCCACTTCAAGACTTTTGTGTGGCCATTGGCGACCTCAAAAAT 120
|||||||||||||||||||||||||||||||| |||||||||||||| ||||| || |||
Sbjct 61 GAAGCTAATGATCCAAGTCCACTTCAAGACTTCTGTGTGGCCATTGGTGACCTTAAGAAT 120
Query 121 GGTGTTTTTGTGAATGGTAAGTTTTGCAAGGATCCAAAGCAAGCAAAGGCAGAAGATTTC 180
|||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||
Sbjct 121 GGTGTTTTTGTGAATGGTAAGTTTTGTAAGGATCCGAAGCAAGCGAAGGCAGAAGATTTC 180
Query 181 TT-TTACTCA-GGCCTCAACCAAG-CAGGAACCACTAATAATAAAGTCAAATCCAACGTG 237
|| || | || ||||||||| ||| |||||| ||||| ||||| ||||||||||||||||
Sbjct 181 TTCTT-C-CAAGGCCTCAAC-AAGGCAGGAAACACTACTAATAGAGTCAAATCCAACGTG 237
Query 238 ACAACAGTCAATGTCGATCAGATTCCAGGGTTAAACACTTTGGGAATATCCTTGGTCCGC 297
||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct 238 ACAACAGTCAATGTCGACCAGATTCCCGGGTTAAACACTTTGGGAATATCCTTGGTCCGC 297
Query 298 ATAGACTATGCGCCATATGGTCAAAACCCGCCTCACACACACCCTCGTGCCACTGAGATC 357
|||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 298 ATAGACTATGCGCCTTATGGACAAAACCCGCCTCACACGCACCCTCGTGCCACTGAGATC 357
Query 358 CTTGTTCTTGTTGAGGGAACATTATATGTTGGTTTTGTCTCTTCCAATCAAGACAACAAC 417
||||||||||| |||||||| |||||||| ||||||||||| |||||||||||||| |||
Sbjct 358 CTTGTTCTTGTCGAGGGAACGTTATATGTAGGTTTTGTCTCCTCCAATCAAGACAATAAC 417
Query 418 CGTTTATTCGCTAAAGTGCTGAACCCGGGCGACGTGTTTGTGTTCCCCATAGGAATGATC 477
||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct 418 CGTTTATTCGCCAAAGTGCTGAACCCCGGCGACGTGTTCGTGTTCCCCATAGGAATGATC 477
Query 478 CATTTTCAAGTGAATATCGGGAAGACCCCTGCAGTGGCCTTTGCTGGACTAAGTAGTCAA 537
||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct 478 CATTTCCAAGTGAATATCGGGAAGACCCCTGCAGTGGCTTTTGCTGGACTAAATAGTCAG 537
Query 538 AATGCTGGTGTCATCACGATTGCAGATACTGTGTTTGGGTCAACGCCTCCGATTAATCCA 597
|| |||||||| |||||||| ||||| |||||||| ||||||||||| || |||||||||
Sbjct 538 AACGCTGGTGTTATCACGATCGCAGACACTGTGTTCGGGTCAACGCCCCCAATTAATCCA 597
Query 598 GATATTTTGGCTCAGGCGTTTCAGTTAGACGTCAATGTTGTTAAAGACCTTGAGGCCAAG 657
|||||| | |||||||||||||||||||| ||||||||||| || || ||||| ||||||
Sbjct 598 GATATTCTCGCTCAGGCGTTTCAGTTAGATGTCAATGTTGTCAAGGATCTTGAAGCCAAG 657
Query 658 TTTAAAAACTAA 669
||||||||||||
Sbjct 658 TTTAAAAACTAA 669
> Ahg891830 jgi|Araly1|891830|Al_scaffold_0007_3816
Length=669
Score = 898 bits (486), Expect = 0.0
Identities = 611/672 (91%), Gaps = 6/672 (1%)
Strand=Plus/Plus
Query 1 ATGAGGTTTTCCAAGTCTCTCATCCTGATTACCTTATCGGCTTTGGTCATTTCCTTTGCC 60
|||||| || ||| ||||||| || |||||||| |||| |||||||||||||||||||||
Sbjct 1 ATGAGGGTTCCCATGTCTCTCGTCTTGATTACCATATCAGCTTTGGTCATTTCCTTTGCC 60
Query 61 GAAGCTAATGATCCAAGTCCACTTCAAGACTTTTGTGTGGCCATTGGCGACCTCAAAAAT 120
|||||| |||||||||||||||||||||||| || ||||||||||| ||||||||||||
Sbjct 61 GAAGCTTCTGATCCAAGTCCACTTCAAGACTTCTGCGTGGCCATTGGTGACCTCAAAAAT 120
Query 121 GGTGTTTTTGTGAATGGTAAGTTTTGCAAGGATCCAAAGCAAGCAAAGGCAGAAGATTTC 180
||||||||||||||||||||||| || |||||||| |||||||| |||||||||||||||
Sbjct 121 GGTGTTTTTGTGAATGGTAAGTTCTGTAAGGATCCGAAGCAAGCGAAGGCAGAAGATTTC 180
Query 181 TT-TTACT-CAGGCCTCAACCAA-GCAGGAACCACTAATAATAAAGTCAAATCCAACGTG 237
|| || | |||||||||| ||| ||||||| ||||| |||| ||||||||||||||||
Sbjct 181 TTCTT--TGCAGGCCTCAA-CAAGGCAGGAAACACTACCAATAGAGTCAAATCCAACGTG 237
Query 238 ACAACAGTCAATGTCGATCAGATTCCAGGGTTAAACACTTTGGGAATATCCTTGGTCCGC 297
||||| ||||||||||| |||||||| ||||||||||| |||||||||||||||||||||
Sbjct 238 ACAACGGTCAATGTCGACCAGATTCCCGGGTTAAACACATTGGGAATATCCTTGGTCCGC 297
Query 298 ATAGACTATGCGCCATATGGTCAAAACCCGCCTCACACACACCCTCGTGCCACTGAGATC 357
|||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 298 ATAGACTATGCGCCTTATGGACAAAACCCGCCTCACACGCACCCTCGTGCCACTGAGATC 357
Query 358 CTTGTTCTTGTTGAGGGAACATTATATGTTGGTTTTGTCTCTTCCAATCAAGACAACAAC 417
||||||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct 358 CTTGTTCTTGTCGAGGGAACGTTATATGTAGGTTTTGTCTCTTCCAATCAAGACAATAAC 417
Query 418 CGTTTATTCGCTAAAGTGCTGAACCCGGGCGACGTGTTTGTGTTCCCCATAGGAATGATC 477
||||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||||
Sbjct 418 CGTTTATTCGCCAAAGTGCTGAACCCCGGCGACGTGTTCGTGTTCCCCATTGGAATGATC 477
Query 478 CATTTTCAAGTGAATATCGGGAAGACCCCTGCAGTGGCCTTTGCTGGACTAAGTAGTCAA 537
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 478 CATTTTCAAGTGAATATCGGGAAGACCCCCGCAGTGGCCTTTGCTGGACTAAGTAGTCAG 537
Query 538 AATGCTGGTGTCATCACGATTGCAGATACTGTGTTTGGGTCAACGCCTCCGATTAATCCA 597
|| |||||||| |||| ||| ||||| |||||||| ||||||||||| || |||||||||
Sbjct 538 AACGCTGGTGTTATCATGATCGCAGACACTGTGTTCGGGTCAACGCCCCCAATTAATCCA 597
Query 598 GATATTTTGGCTCAGGCGTTTCAGTTAGACGTCAATGTTGTTAAAGACCTTGAGGCCAAG 657
|||||| | |||||||| |||||| |||| ||||| ||||| || || ||||| ||||||
Sbjct 598 GATATTCTCGCTCAGGCATTTCAGCTAGATGTCAACGTTGTCAAGGATCTTGAAGCCAAG 657
Query 658 TTTAAAAACTAA 669
||||||||||||
Sbjct 658 TTTAAAAACTAA 669
> Ahg494078 jgi|Araly1|494078|fgenesh2_kg.7__3511__AT5G39100.1
Length=658
Score = 791 bits (428), Expect = 0.0
Identities = 507/546 (93%), Gaps = 2/546 (0%)
Strand=Plus/Plus
Query 125 TTTTTGTGAATGGTAAGTTTTGCAAGGATCCAAAGCAAGCAAAGGCAGAAGATTTCTT-T 183
||||||||||||||||||| || |||||||| |||||||| ||||||||||||||||| |
Sbjct 1 TTTTTGTGAATGGTAAGTTCTGTAAGGATCCGAAGCAAGCCAAGGCAGAAGATTTCTTCT 60
Query 184 TACTCAGGCCTCAACCAAGCAGGAACCACTAATAATAAAGTCAAATCCAACGTGACAACA 243
| ||||||||||||||| ||||||| |||| |||||||||||| |||||||||||||||
Sbjct 61 T-CTCAGGCCTCAACCAGGCAGGAAACACTGATAATAAAGTCAGATCCAACGTGACAACG 119
Query 244 GTCAATGTCGATCAGATTCCAGGGTTAAACACTTTGGGAATATCCTTGGTCCGCATAGAC 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 120 GTCAATGTCGATCAGATTCCAGGGTTAAACACTTTGGGAATATCCTTGGTCCGCATAGAC 179
Query 304 TATGCGCCATATGGTCAAAACCCGCCTCACACACACCCTCGTGCCACTGAGATCCTTGTT 363
|||||||| ||||| ||||||||||||||||| ||||| ||||| |||||||||||||||
Sbjct 180 TATGCGCCGTATGGACAAAACCCGCCTCACACGCACCCGCGTGCTACTGAGATCCTTGTT 239
Query 364 CTTGTTGAGGGAACATTATATGTTGGTTTTGTCTCTTCCAATCAAGACAACAACCGTTTA 423
||||| |||||||| |||||||| || ||||||||||||||||||||||| |||||||||
Sbjct 240 CTTGTCGAGGGAACGTTATATGTCGGGTTTGTCTCTTCCAATCAAGACAATAACCGTTTA 299
Query 424 TTCGCTAAAGTGCTGAACCCGGGCGACGTGTTTGTGTTCCCCATAGGAATGATCCATTTT 483
||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 300 TTCGCCAAAGTGCTGAACCCCGGCGACGTGTTCGTGTTCCCCATAGGAATGATCCATTTT 359
Query 484 CAAGTGAATATCGGGAAGACCCCTGCAGTGGCCTTTGCTGGACTAAGTAGTCAAAATGCT 543
||||||||||||||||||||||| ||| |||||||||||||| | |||||||| || |||
Sbjct 360 CAAGTGAATATCGGGAAGACCCCCGCAATGGCCTTTGCTGGATTGAGTAGTCAGAACGCT 419
Query 544 GGTGTCATCACGATTGCAGATACTGTGTTTGGGTCAACGCCTCCGATTAATCCAGATATT 603
||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 420 GGTGTTATCACGATCGCAGATACTGTGTTTGGGTCAACGCCTCCGATTAATCCATATATT 479
Query 604 TTGGCTCAGGCGTTTCAGTTAGACGTCAATGTTGTTAAAGACCTTGAGGCCAAGTTTAAA 663
| |||||||| ||||||||||| ||||||||||| || |||||||||||||||||||||
Sbjct 480 CTAGCTCAGGCATTTCAGTTAGATGTCAATGTTGTCAAGGACCTTGAGGCCAAGTTTAAA 539
Query 664 AACTAA 669
||||||
Sbjct 540 AACTAA 545
> Ahg891827 jgi|Araly1|891827|Al_scaffold_0007_3813
Length=672
Score = 689 bits (373), Expect = 0.0
Identities = 542/623 (87%), Gaps = 13/623 (2%)
Strand=Plus/Plus
Query 43 TTGGTCATTTCCTTTGCCGAA-GCTAATGATCCAAGTCCACTTCAAGACTTTTGTGTGGC 101
||||||||| ||||| || || ||| ||||||| |||||||| |||||||| ||||||||
Sbjct 43 TTGGTCATTCCCTTTTCC-AATGCTTATGATCCGAGTCCACTCCAAGACTTCTGTGTGGC 101
Query 102 CATTGGCGACCTCAAAAATGGTGTTTTTGTGAATGGTAAGTTTTGCAAGGATCCAAAGCA 161
| |||| ||||||| || ||||||||||||||||||||| || ||||||||||||||
Sbjct 102 CGTTGGTAACCTCAACAA---TGTTTTTGTGAATGGTAAGTTCTGTAAGGATCCAAAGCA 158
Query 162 AGCAAAGGCAGAAGATTTCTTTTACTCAGGCCTCAACCAA-GCAGGAACCACTAATAATA 220
||| ||||| ||||| ||||| |||||||| ||||| ||| || |||| ||| |||||||
Sbjct 159 AGCGAAGGCGGAAGACTTCTTCTACTCAGGTCTCAA-CAAGGCCGGAAGCACCAATAATA 217
Query 221 AAGTCAAATCCAACGTGACAACAGTCAATGTCGATCAGATTCCAGGGTTAAACACTTTGG 280
| |||||||||||||| |||||||| ||||| ||||||||||||||| |||||||| |||
Sbjct 218 ATGTCAAATCCAACGTCACAACAGTGAATGTTGATCAGATTCCAGGGCTAAACACTATGG 277
Query 281 GAATATCCTTGGTCCGCATAGACTATGCGCCATATGGTCAAAACCCGCCTCACACACACC 340
||||||| ||||| ||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct 278 GAATATCATTGGTTCGCATAGACTATGCGCCTTATGGCCAAAACCCGCCTCACACACACC 337
Query 341 CTCGTGCCACTGAGATCCTTGTTCTTGTTGAGGGAACATTATATGTTGGTTTTGTCTCTT 400
| ||||||||||| |||||||| ||||| |||||||| ||||||||||| ||||||||||
Sbjct 338 CGCGTGCCACTGAAATCCTTGTCCTTGTCGAGGGAACGTTATATGTTGGGTTTGTCTCTT 397
Query 401 CCAATCAAGACAACAACCGT-TTATTCGCTAAAGTGCTGAACCCGGGCGACGTGTTTGTG 459
||||||||||||| |||||| || ||||| ||| | || |||| || || ||||| |||
Sbjct 398 CCAATCAAGACAATAACCGTCTT-TTCGCCAAAATTTTGCACCCCGGTGATGTGTTCGTG 456
Query 460 TTCCCCATAGGAATGATCCATTTTCAAGTGAATATCGGGAAGACCCCTGCAGTGGCCTTT 519
||||||||||| ||||| ||||||||||||||||||||||||||||| || || ||||||
Sbjct 457 TTCCCCATAGGGATGATTCATTTTCAAGTGAATATCGGGAAGACCCCCGCGGTTGCCTTT 516
Query 520 GCTGGACTAAGTAGTCAAAATGCTGGTGTCATCACGATTGCAGATACTGTGTTTGGGTC- 578
|| ||||| |||||||| || |||||||||||||| |||||| | ||||||||||| ||
Sbjct 517 GCCGGACTTAGTAGTCAGAACGCTGGTGTCATCACAATTGCAAACACTGTGTTTGGTTCG 576
Query 579 AACGCCTCCGATTAATCCAGATATTT-TGGCTCAGGCGTTTCAGTTAGACGTCAATGTTG 637
|| ||||| ||| ||||||| | || |||||||||| ||||||||||| || ||||| |
Sbjct 577 AAA-CCTCCCATTTATCCAGA-AGTTCTGGCTCAGGCATTTCAGTTAGATGTGAATGTCG 634
Query 638 TTAAAGACCTTGAGGCCAAGTTT 660
| |||||||||||||||||||||
Sbjct 635 TCAAAGACCTTGAGGCCAAGTTT 657
> Ahg891831 jgi|Araly1|891831|Al_scaffold_0007_3817
Length=501
Score = 617 bits (334), Expect = 2e-176
Identities = 417/457 (91%), Gaps = 5/457 (1%)
Strand=Plus/Plus
Query 77 GTCCACTTCAAGACTTTTGTGTGGCCATTGGCGACCTCAAAAATGGT-G---TTTTTGTG 132
|||||||||||||||| || ||||||||| | ||||||||||||||| | ||||||||
Sbjct 46 GTCCACTTCAAGACTTCTGCGTGGCCATTAGTGACCTCAAAAATGGTGGTAATTTTTGTG 105
Query 133 AATGGTAAGTTTTGCAAGGATCCAAAGCAAGCAAAGGCAGAAGATTTCTTTTACTCAGGC 192
||||||||||| |||||| |||| |||||||| |||||| |||||||||| |||||||||
Sbjct 106 AATGGTAAGTTCTGCAAGTATCCGAAGCAAGCGAAGGCAAAAGATTTCTTCTACTCAGGC 165
Query 193 CTCAACCAAGCAGGAACCACTAATAATAAAGTCAAATCCAACGTGACAACAGTCAATGTC 252
|||||||| ||||| ||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct 166 CTCAACCAGGCAGGGACCACTAATAATAGAGTCAAATCCAACGTGACAACGGTCAATGTC 225
Query 253 GATCAGATTCCAGGGTTAAACACTTTGGGAATATCCTTGGTCCGCATAGACTATGCGCCA 312
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 226 GACCAGATTCCAGGGTTAAACACTTTGGGAATATCCTTGGTCCGCATAGACTATGCGCCT 285
Query 313 TATGGTCAAAACCCGCCTCACACACACCCTCGTGCCACTGAGATCCTTGTTCTTGTTGAG 372
||||| |||||||| |||||||| ||||| ||||| |||||||||||||||||||| |||
Sbjct 286 TATGGACAAAACCCACCTCACACGCACCCGCGTGCTACTGAGATCCTTGTTCTTGTCGAG 345
Query 373 GGAACATTATATGTTGGTTTTGTCTCTTCCAATCAAGACAACAACCGTTTATTCGCTAAA 432
||||| || ||||| |||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 346 GGAACTTTGTATGTAGGTTTTGTCTCTTCCAATCAAGACAATAACCGTTTATTCGCCAAA 405
Query 433 GTGCTGAACCCGGGCGACGTGTTTGTGTTCCCCATAGGAATGATCCATTTTCAAGTGAAT 492
||||||||||| ||||||||||| ||||| || || ||||||||| ||||||||||||||
Sbjct 406 GTGCTGAACCCCGGCGACGTGTTCGTGTTTCCTATTGGAATGATCTATTTTCAAGTGAAT 465
Query 493 ATCGGGAAGACCCCTGCAGTGGCCTTTGCTGGACTAA 529
||||| |||||||| ||||||||||||| ||||||||
Sbjct 466 ATCGGAAAGACCCC-GCAGTGGCCTTTGTTGGACTAA 501
> Ahg494073 jgi|Araly1|494073|fgenesh2_kg.7__3506__AT5G39130.1
Length=741
Score = 484 bits (262), Expect = 3e-136
Identities = 540/672 (80%), Gaps = 27/672 (4%)
Strand=Plus/Plus
Query 1 ATGA-GGTTTTC-CAAGTCTCTCAT-CCTGATTACC-TTATCGGCTTTGGTCATTTCCTT 56
|||| || |||| ||| |||||||| ||| ||| || | || |||| |||||||||||
Sbjct 39 ATGATGG-TTTCTCAA-TCTCTCATCCCT-ATTGCCATAAT-TTCTTTAGTCATTTCCTT 94
Query 57 TGCCGAA-GCTAATGATCCAAGTCCACTTCAAGACTTTTGTGTGGCCATTGGCGACCTCA 115
|||| || ||| |||||||||||||||| |||||||| ||||| ||||||| |||||
Sbjct 95 TGCC-AATGCTTATGATCCAAGTCCACTCCAAGACTTCTGTGTTGCCATTGATGACCT-- 151
Query 116 AAAATGGTGTTTTTGTGAATGGTAAGTTTTGCAAGGATCCAAAGCAAG-CAAAGGCAGAA 174
|||| || ||||||||||| |||| |||||| || || || |||| || | | ||| ||
Sbjct 152 AAAA-GGCGTTTTTGTGAACGGTAGGTTTTGTAAAGACCCGAAGCGAGTC-GATGCAAAA 209
Query 175 GATTTCTTT-TACTCAGGCCTCAAC-CAAGCAGGAACCACTAATAATAAAGTCAAATCCA 232
||||| ||| | ||||||||||||| | | |||| ||| ||||| |||| || |
Sbjct 210 GATTT-TTTCTTCTCAGGCCTCAACGTACCCGGGAA-CACGGATAATCAAGTTGGCTCTA 267
Query 233 ACGTGACAACAGTCAATGTCGATCAGATTCCAGGGTTAAACACTTTGGGAATATCCTTGG 292
| ||||| | || ||||| |||||||| |||||| ||||||| |||||||||| ||||
Sbjct 268 ATGTGACCATTGTAAATGTTGATCAGATCCCAGGGCTAAACACCATGGGAATATCATTGG 327
Query 293 TCCGCATAGACTATGCGCCAT-ATGGTCAAAACCCGCCTCACACACACCCTCGTGCCACT 351
||||||||||||| || || | |||| ||||| || |||||||| |||||||||| | |
Sbjct 328 TCCGCATAGACTACGCACC-TCATGGCCAAAATCCACCTCACACGCACCCTCGTGGCTCA 386
Query 352 GAGATCCTTGTTCTTGTTGAGGGAACATTATATGTTGGTTTTGTCTCTTCCAATCAAGAC 411
||||||||||| ||||| | ||||||||||| || ||||||||||| |||||||||||
Sbjct 387 GAGATCCTTGTCCTTGTCAAAGGAACATTATACGTCGGTTTTGTCTCATCCAATCAAGAT 446
Query 412 AACAACCGTTTATTCGCTAAAGTGCTGAACCCGGGCGACGTGTTTGTGTTCCCCATAGGA 471
|||||||| |||||||| ||||| || |||| || || || ||||||||||||||||||
Sbjct 447 AACAACCGGTTATTCGCCAAAGTATTGCACCCCGGTGATGTTTTTGTGTTCCCCATAGGA 506
Query 472 ATGATCCATTTTCAAGTGAATATCGGGAAGACCCCTGCAGTGGCCTTTGCTGGACTAAGT 531
|||||||||||||| || ||||||||||| | || || || || ||||| ||| | |||
Sbjct 507 ATGATCCATTTTCAGGTAAATATCGGGAAAATTCCAGCCGTTGCTTTTGCGGGATTGAGT 566
Query 532 AGTCAAAATGCTGGTGTCATCACGATTGCAGATACTGTGTTTGGGTCAA-CGCCTCCGAT 590
||||| || |||||||||||||| || ||| | ||||| |||||||||| | ||||| ||
Sbjct 567 AGTCAGAACGCTGGTGTCATCACAATCGCAAACACTGTTTTTGGGTCAAAC-CCTCCAAT 625
Query 591 TAATCCAGATATTTTGGCTCAGG-CGTTTCAGTTAGACGTCAA-TGTTGTTAAAGACCTT 648
| ||||||| || | || |||| | || | ||| || | ||| |||||| ||||| |||
Sbjct 626 TTATCCAGAGCTTCTCGC-CAGGGCATTCCGGTTGGATG-CAAGTGTTGTCAAAGAACTT 683
Query 649 GAGGCCAAGTTT 660
|||||||||||
Sbjct 684 CAGGCCAAGTTT 695
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 24551158548
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5