BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G39450.1 Length=2137 Score E Sequences producing significant alignments: (Bits) Value Ahg494041 jgi|Araly1|494041|fgenesh2_kg.7__3474__AT5G39450.1 2848 0.0 Ahg947867 jgi|Araly1|947867|scaffold_704096.1 791 0.0 Ahg947866 jgi|Araly1|947866|scaffold_704095.1 686 0.0 > Ahg494041 jgi|Araly1|494041|fgenesh2_kg.7__3474__AT5G39450.1 Length=1969 Score = 2848 bits (1542), Expect = 0.0 Identities = 1851/1997 (93%), Gaps = 33/1997 (2%) Strand=Plus/Plus Query 143 TCTCTCTCGCATCGTCTTCTTAGTTAGCGATTTCCTCATTTTTCTTATACAATCTGATTC 202 |||||||| |||||||||||||||||| |||||||||||||||||| ||||| | |||| Sbjct 1 TCTCTCTCACATCGTCTTCTTAGTTAGTGATTTCCTCATTTTTCTTCCACAATTTAATTC 60 Query 203 GGATCGAGTTCTTCTTTGATGGGTAATTGAAAAGTTTGAATCTTGTTTACGTAAAAAGCG 262 |||||||||||| |||||||||||||||||||||||||| ||||||| |||| |||||| Sbjct 61 GGATCGAGTTCTACTTTGATGGGTAATTGAAAAGTTTGATTCTTGTTCACGT-TAAAGCG 119 Query 263 ATCTGATTCAAACCAAAACTGATATTTTTGACGAATCCCAAAGCTGCGTTTTTTGATCTT 322 |||||||||||| | | | |||||||||||| ||||||||||| Sbjct 120 ATCTGATTCAAA-C----C------------C----CCCAAAGCTGCG-TTTTTGATCTT 157 Query 323 CAAAGTATGAATCAGATGA-G--GAACGGCGATTTAGGGTCAGAATCATTTGGTACTTGC 379 || |||||||||||||||| | ||||| ||||||||| || |||||||||||| ||||| Sbjct 158 CATAGTATGAATCAGATGAGGAAGAACGACGATTTAGGTTCGGAATCATTTGGTGCTTGC 217 Query 380 TTGCTTCTGTCTCTTCCAGAAGATGTTATTGCTGTTATAGCACGTTTTGTATCTCCAAGA 439 |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct 218 TTGCTTCTGTCTCTTCCAGAAGATGTAATTGCTGTTATAGCTCGTTTTGTATCTCCAAGA 277 Query 440 GACATTTGCAATCTGAGCTTATGCTGCAAAAGTCTATGTGACGTTGTGGATTCAGAAAGG 499 |||||||||||||| |||||||||||||||||||| ||||| ||| | |||||||||||| Sbjct 278 GACATTTGCAATCTAAGCTTATGCTGCAAAAGTCTCTGTGAGGTTTTTGATTCAGAAAGG 337 Query 500 ATCTGGCTTGTGCAGTGTGAAGTAGTAAAGGTTCTTCCTTTATCTGAAATAATCCAATGG 559 |||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 338 ATCTGGCTTGTGCAATGTGAAGTAGTAAAGGTTCTTTCTTTATCTGAAATGATCCAATGG 397 Query 560 CGAATTGGGATTTCTTCTTATAAGGCGCTTTGTTGGTTTCTTGGAGAGGTAATGAAGCCT 619 ||||| || || ||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct 398 CGAATCGGAATCTCTTCTTATAAGGCGTTTTGTCGGTTTCTTGGAGAGGTAATGAAGCCT 457 Query 620 CTTGTTGGTGTTTGGGTTCATCAAAACCCTGAACTTGGGAATGTTGTTTATGTCATGCCT 679 |||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct 458 CTTGTTGGGGTTTGGGTTCACCAAAACCCTGAACTTGGGAATGTTGTTTATGTAATGCCT 517 Query 680 GGTTTCTTGTCTGTTGTTGGGTGTCGGATAATTCCACAAGAGGTTGGTCCTTTGGGGATT 739 ||||| || || ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 518 GGTTTTTTATCCGTTGTTGGGTGTCGGATAATTCCACAAGAGGTTGGTCCTTTAGGGATT 577 Query 740 GAGGAGGCTCGAGTTATGTGGTCACCTGTGTTTGAGATTATCTGTGGTTTTGATGGCTCC 799 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 578 GAGGAGGCTCGAGTTATGTGGTCACCTGTGTTTGAGATAATCTGCGGTTTTGATGGCTCT 637 Query 800 GCCAAGTTTTTCCTCCATGGGAGAGATGGAAAAGTGCAATGCTGTCTGCACCCTGGTTTC 859 |||||||||||||||||||| ||||| |||||| |||| ||||| ||||| |||||||| Sbjct 638 GCCAAGTTTTTCCTCCATGGAAGAGACGGAAAACTGCATTGCTGCCTGCATCCTGGTTTT 697 Query 860 GTTAGGGGCATTGAGAAGAGTTGTAATGTGCTTCTACTTGAGGTTGAGACGAGGCGAGAG 919 |||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct 698 GTTATGGGCATTGAGAAGAGTTGTAATGTGCTTTTACTCGAGGTTGAGACGAGGCGAGAG 757 Query 920 AAGAAGTTGTGCAATGAGATTGATGAGACTGTGTTGTTGGTAGAGACGGGGGTTCAGTTA 979 ||| ||||||||| ||||| | ||||||||||||||||| |||||| |||||||||||| Sbjct 758 AAGGAGTTGTGCAGTGAGA-T--TGAGACTGTGTTGTTGGGAGAGACAGGGGTTCAGTTA 814 Query 980 CCATTTCGCAAACTACCATTTAGTTATAGAAGGAATTTACTTCACATAGTGACAAGCACT 1039 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 815 CCATTTCGCAAACTACCCTTTAGTTATAGAAGGAATTTACTTCACATAGTGACAAGCACT 874 Query 1040 GTTGGTATACCTGTACCTGATCTATCAAGTGAAAAGTTATTTCCTACGTCAAAAGATGAT 1099 |||||||||||||||||||||||||||||||||| ||||||||| || || ||||||||| Sbjct 875 GTTGGTATACCTGTACCTGATCTATCAAGTGAAAGGTTATTTCCCACTTCGAAAGATGAT 934 Query 1100 GAAGCGGTGTTGT-TGGAACGCAGAACCATGCTTCTTAAAATGCACAAGTTTGGTGGTGA 1158 ||||||||||||| | ||||||||||||||||| ||||||||||| |||||||||| ||| Sbjct 935 GAAGCGGTGTTGTCT-GAACGCAGAACCATGCTCCTTAAAATGCATAAGTTTGGTGTTGA 993 Query 1159 TTGGAATCACATGAACCTGGAGGATGAGTGCACAAATATTCCAAATCAGGTAGACATAAA 1218 |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct 994 TTGGAATCACATGAACCTGGAGGATGAGTGTATAAATATTCCAAATCAGGTAGACATAAA 1053 Query 1219 CAAATCGTGGAAGCATCTAGGTTTTGAAGGCGATATTCGCAACATGGACGCTGAGAATCA 1278 | |||||||||||||||| || ||||||| ||||| ||| ||||||||||||| |||||| Sbjct 1054 CGAATCGTGGAAGCATCTTGGATTTGAAGTCGATAATCGGAACATGGACGCTGGGAATCA 1113 Query 1279 GACACAAAGGAAGAGCTTTAGTAGGTATTTCAGAAGTGGCATAAAGCATATTCTCGGGAG 1338 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1114 GACACAAAGGAAGAGCTTTAGTAGGTATTTCAGAAGTGGCATAAAGCATATTCTTGGGAG 1173 Query 1339 GTCTAGTTCTTCAAAGAACATGTCTTCTTCAAGAAGTGAGACTAGACCTTTGAATCTCCA 1398 ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 1174 GTCTAGTTCTTTAAAGAACACGTCTTCTTCAAGAAGTGAGACTAGACCTTGGAATCTCCA 1233 Query 1399 AAAGTTTCTTAATTTTGGTGATTCAATAGGTCTTAGTCTCAAAGCTTCCAATATTAAGTT 1458 ||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||| | Sbjct 1234 AAAATTTCTTAATTTTGGTGATTCCATAGGTCTTAGTCTCAAAGCTTCCAAGATTAAGCT 1293 Query 1459 GTCTTCTTACCAAGGTTGGCCAAACATGGACGAAACCCGTTATGCCCTTTATAAGCTACC 1518 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1294 GTCTTCTTATCAAGGTTGGCCAAACATGGACGAAACCCGTTATGCCCTTTATAAGCTACC 1353 Query 1519 GATTAAGGATCCCATCGCTAACGATGAGTATGCCGGGTTATGGGGAGGAACTTTTGGCTG 1578 ||||||| |||||||||||||||| ||||||||||| || |||||||||||||||||||| Sbjct 1354 GATTAAGAATCCCATCGCTAACGAAGAGTATGCCGGCTTGTGGGGAGGAACTTTTGGCTG 1413 Query 1579 GCCACCAGGAAAATGTACAGAAGATAAACCAGGGAAGGCt-ttttttCTACTGATGCTCT 1637 |||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||| Sbjct 1414 GCCACCAGGAAAATGTACAGAAGATAAACCCGGGAAGGCTCTTTTTT-TACTGATGCTCT 1472 Query 1638 CTTATGAAGAATCTCAAGATGGTACTGAGAGACTTCTTATAGGGACAAAAATACTCGAAG 1697 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct 1473 CTTATGAAGAATCTCAAGATGGTACTGAAAGACTTCTTATAGGGACGAAAATACTCGAAG 1532 Query 1698 GAACTCACTACGGGATGCATCCTAATGGATCTGCAATGTTTGTTATAAAAATTGATTCGC 1757 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct 1533 GAACTCACTACGGGATGCATCCTAATGGATCTGCAATGTTTGTTATAAAGATTGATTCAC 1592 Query 1758 CATCCTTTGAGGGTTTTCCTTTCGACACAAATGGAGAAGATTTTGAGCATTCTTACGCAG 1817 | ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1593 CTTCCTTTGAGCTTTTTCCTTTCGATACAAATGGAGAAGATTTTGAGCATTCTTACGCAG 1652 Query 1818 GAGAAGGTACTGCAAAGGGTTATGGTTTCCGGTATCCTGGTTACAAACCTGGTACACTTT 1877 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1653 GAGAAGGTACTGCAAAGGGTTATGGTTTCCGGTATCCTGGTTACAAACCGGGTACACTTT 1712 Query 1878 TCGTGACATCTAAAGGTCTTCTCATGTTCATTTGGAAAGCAACTAAAGCTGTGTTGACAT 1937 |||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||| Sbjct 1713 TCGTAACATCTAAAGGTCTTCTCATGTTTGTTTGGAAAGCAACTAAAGTTGTGTTGACAT 1772 Query 1938 TGCAAAGACTTAACCTTGGAGAGCTCTTAAGGAAAGGTGTATGTGTATCGCCTTTACCTC 1997 | ||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct 1773 TACAAAGACTTGACCTTGGAGAGCTCTTAAGGAAAGGCGTGTGTGTATCGCCTTTACCTC 1832 Query 1998 CATGTTTGAATTTTGCTTATTTGATAAAATGTCACACCAATGTGTTTGCCCCTGAACGAA 2057 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct 1833 CATGTTTGAATTTTGCTTATTTGACAAAATCTCACACCAATGTGTTTGCCCCTGAACGAA 1892 Query 2058 GAAGATCATAGGAGATTGCTGCAACAAATTTGAAACTCACAAGTCTTCTCTATTTCCAAT 2117 ||||||| ||||||||| |||||||| ||| ||| |||||||||| ||||| |||||||| Sbjct 1893 GAAGATCGTAGGAGATTCCTGCAACAGATTCGAAGCTCACAAGTCCTCTCTGTTTCCAAT 1952 Query 2118 ATAATAGGCTCATTATC 2134 |||||| ||||||||| Sbjct 1953 ATAATAATCTCATTATC 1969 > Ahg947867 jgi|Araly1|947867|scaffold_704096.1 Length=1480 Score = 791 bits (428), Expect = 0.0 Identities = 1102/1411 (78%), Gaps = 112/1411 (8%) Strand=Plus/Plus Query 362 GAATCATTTGGTACTTGCTTGCTTCTGT-CTCTTCCAGAAGATGT-TATTGCTGTTATAG 419 ||||| |||||| ||||||||||||| | | ||||| || |||| | |||||||||| Sbjct 33 GAATCGTTTGGTGCTTGCTTGCTTCT-TACGCTTCCCCAATATGTGT-TTGCTGTTATCT 90 Query 420 CACGTTTTGTATCTCCAAGAGACATTTGCAATCTGAGCTTATGCTGCAAAAGTCTATGTG 479 |||||||| | |||||||| |||||||||||||||| ||| ||| | |||||| | |||| Sbjct 91 CACGTTTTCTTTCTCCAAGCGACATTTGCAATCTGATCTTGTGCGGTAAAAGTATTTGTG 150 Query 480 ACGTTGTGGATTCAGA-AAGGATC-TGGCTTGTGCAGTGTGAAGTAGTAAAGGTTCTTCC 537 | |||| |||| || || || | ||||||||||| |||||||| ||||||||| |||| Sbjct 151 CCCTTGTCCATTCCGACAA-GA-CATGGCTTGTGCAATGTGAAGTCGTAAAGGTTATTCC 208 Query 538 TTTATCTGAAATAATCCAATGGCGAATTGGGATTTCTTCTTATAAGGCGCTTTGTTGGTT 597 ||| | ||||||| ||||||||||||| ||||| |||||||| |||||||||||| |||| Sbjct 209 TTTGTTTGAAATAGTCCAATGGCGAATCGGGATCTCTTCTTACAAGGCGCTTTGTAGGTT 268 Query 598 TCTTGGAGAGGTAATGAAGCCTCTTGTTGGTG-TTTGGGTTCATCAA-AACCCTGAACTT 655 ||||| |||||| ||||||| |||||||| | |||||||||| || |||||||||| | Sbjct 269 TCTTGTAGAGGTGGTGAAGCCGCTTGTTGG-GATTTGGGTTCA-AAAGAACCCTGAACGT 326 Query 656 GGGAATGTTGTTTATGTCATGCCTGGTTTCTTGTCTGTTGTTGGGTGTCGGATAATTCCA 715 |||||||| |||||||| |||||||||||||||||||||||||| || ||||||||||| Sbjct 327 GGGAATGTCGTTTATGTGATGCCTGGTTTCTTGTCTGTTGTTGGATGCCGGATAATTCCT 386 Query 716 CAAGAGGTTGGTCCTTTGGGGATT-GAGGAGGCTCGAGTTATGTGGTCACCTGTGTTTGA 774 ||||| |||||||||||| ||||| || ||| | | || |||||||||| |||||||| Sbjct 387 CAAGAAGTTGGTCCTTTGTGGATTCAAGAAGG-ACAAATTGTGTGGTCACCAGTGTTTGA 445 Query 775 GATTATCTGTGGTTTTGATGGCTCCGCCAAG-TTTTTCCTCCATGGGAGAGATGGAA-AA 832 ||| ||||| ||| |||||||||| | | |||||||||||||| ||||| ||| || Sbjct 446 GATAATCTGCGGTGTTGATGGCTCTAAC-GGTTTTTTCCTCCATGGAAGAGA-CGAAGAA 503 Query 833 GTGCAATGCTGTCTGCACCCTGGTTTCGTTAGGGGCATTGAGAAGAGTTGTAATGTGCTT 892 | || | | ||| || ||||||||||||||| |||||| ||||||||||| |||| |||| Sbjct 504 G-GC-A-GTTGTTTGTACCCTGGTTTCGTTATGGGCATCGAGAAGAGTTGCAATGAGCTT 560 Query 893 CTACTTGAGGTTGAGACGAGGCGAGAGAAGAAGTT-GTGC-AATGAGATTGA-TG---AG 946 ||||| || |||||| |||||| ||||||| |||| || | ||||||||||| | || Sbjct 561 CTACTCGAAGTTGAGCCGAGGCAAGAGAAG-AGTTCGT-CTAATGAGATTGAGAGAAAAG 618 Query 947 ACT--------GTGTTGT--TGG--TAGAGACGGGGGTTCAGTTACCATTTCGCAAA-CT 993 ||| | ||| | || | | | | ||| ||| |||||| | ||| || Sbjct 619 ACTCAAGAAAAGAGTTATCGGGGAAAATAAATGAGGGAGGGGTT-CCATTT-GGAAATCT 676 Query 994 A-CCATTTAGTTATAGAAGGAATTTACTTCACATAGTGAC-AAGCACTGTTGGTATACCT 1051 | | |||||| ||||||||| |||||| | |||||| | || || ||| || ||| | Sbjct 677 AGGC-TTTAGTGATAGAAGGAGCTTACTTGATATAGTGGCAAACCA-TGTAAGTCTACGT 734 Query 1052 GTAC-CTGATCTATCAAGTGAAAAGTTATTTCCTA-C--GTC-AAA-A-GATGATGAAGC 1104 || | ||| | || ||| | |||||||||||| | | ||| ||| | ||||| ||||| Sbjct 735 GT-CGGTGAACCATTAAGAGGAAAGTTATTTCCCACCAGGTCGAAAGATGATGACGAAGC 793 Query 1105 GGTGTTGTTGGAACGCAGAACCATGCTTCTTAAAATGCACAAGTTTGGTGGTGAT-TGGA 1163 ||||||||||||||||||||||||||| |||||||||| ||| |||||||| || |||| Sbjct 794 GGTGTTGTTGGAACGCAGAACCATGCTCCTTAAAATGCTCAAATTTGGTGG-GAACTGGA 852 Query 1164 ATCACATGAACCTGGAGGATGA-G-TGCA-CAA-AT-AT--TCCAAAT-CAGGTAGACAT 1215 | |||||||| ||||||| || | | || | | || || ||| | | ||||||||||| Sbjct 853 AGCACATGAATTTGGAGGAGGATGAT-CAGCTATATTATAATCCTA-TGCAGGTAGACAT 910 Query 1216 AAACAA-ATCGTGG-AAGCATCTAGGTTTTGAAGGCGATATTCGCAACATGGACGCT-GA 1272 ||| | || ||| || |||| ||| | || | | | || |||||||| | || Sbjct 911 AAATGAGATA-TGGGAAA-ATCTCGGTGAT-AA--C-AC-TGA-CATCATGGACGATAGA 962 Query 1273 GA--ATCAGA------C-ACA--AAGGAAGA-G--CTTTAGTAGGTATTTCAGAAGTGGC 1318 || |||||| | ||| |||||||| | |||||| | || ||||| ||||||| Sbjct 963 GAGTATCAGAGAGAGGCTACACCAAGGAAGAAGAGCTTTAGCATGTTTTTCATAAGTGGC 1022 Query 1319 ATAAAGCATATTCTCGGGAGGTCTAGTTCTTCAA-AGAACATGTCTT--C-TTCAAGAAG 1374 || | ||||||||| |||| ||||||| || || |||||| | | | ||| || || Sbjct 1023 ATCATGCATATTCTTGGGAAGTCTAGTCCTG-AAGAGAACACGCCGCGGCCTTCGAGCAG 1081 Query 1375 TGAGACTAGACCTTTGAATCTCCAAAAGTTTCTTAATTTTGGTGATTCAATAGGTCTTAG 1434 ||||| ||||| || ||||| ||||| ||||||| | ||||||| || | || ||||| Sbjct 1082 TGAGATTAGACGTTCGAATCGCCAAACCTTTCTTAGCTCTGGTGATACATTCGGCCTTAG 1141 Query 1435 TCTCAAAGCTTCCAATATTAAGTTGTCTTCTTACCAAGGTTGGCCAAACATGGACGAAAC 1494 ||||||||||||| | | | || |||||||||||||||| ||||||| |||| | ||| Sbjct 1142 TCTCAAAGCTTCCTACACTGAGATGTCTTCTTACCAAGGGTGGCCAATCATGTCCCAAAA 1201 Query 1495 CCG-TTATGCCCTTTATAAGCTACCGATTAAGGATCCCATCGCTAA-CGATGAGTATGCC 1552 ||| || | ||||| |||| ||||| || ||| |||||||| ||| | | ||||||||| Sbjct 1202 CCGCTTTT-CCCTTCATAAACTACCAATGAAGAATCCCATCAATAATCAA-GAGTATGCC 1259 Query 1553 GGGTTATGGGGAGGAACTTTTGGCTGGCCACCAG-GAAAATGTAC-AGAAGATAAA-CCA 1609 || || ||||||||||| |||||||||||||| | | || ||| | ||||||||| ||| Sbjct 1260 GGTTTGTGGGGAGGAACGTTTGGCTGGCCACCTGAGCAA-TGT-CGAGAAGATAAGTCCA 1317 Query 1610 GGGAAGGCtttttttCT-ACTGATGCTCTCTTATGAAGAATCTCAAGATGG-TACTGAGA 1667 | |||||| | || || |||||||||| ||||| |||||||| | || | || ||||| Sbjct 1318 GA-AAGGCTCTATT-CTTACTGATGCTCACTTATAAAGAATCTGAGGA-GAATAGTGAGA 1374 Query 1668 GACTTCTTATAGGGACAAAAATACTCGAAGG 1698 || |||| || ||||| |||||||| ||||| Sbjct 1375 GAGTTCTCATTGGGACGAAAATACTTGAAGG 1405 > Ahg947866 jgi|Araly1|947866|scaffold_704095.1 Length=1769 Score = 686 bits (371), Expect = 0.0 Identities = 693/843 (82%), Gaps = 44/843 (5%) Strand=Plus/Plus Query 362 GAATCATTTGGTACTTGCTTGCTTCTGT-CTCTTCCAGAAGATGT-TATTGCTGTTATAG 419 |||||||||||| ||||||||||||| | | |||||||||||||| | || ||||||| Sbjct 33 GAATCATTTGGTGCTTGCTTGCTTCT-TACGCTTCCAGAAGATGTGT-TTACTGTTATCT 90 Query 420 CACGTTTTGTATCTCCAAGAGACATTTGCAATCTGAGCTTATGCTGCAAAAGTCTATGTG 479 | |||||| | || ||||| |||||||||||||| | ||| ||| |||||||||| |||| Sbjct 91 CTCGTTTTCTTTCACCAAGCGACATTTGCAATCTAATCTTGTGCGGCAAAAGTCTTTGTG 150 Query 480 ACGTTGTGGATTCAGA-AAGGATC-TGGCTTGTGCAGTGTGAAGTAGTAAAGGTTCTTCC 537 | |||| ||||| || || || | ||||||||||| ||||||| ||||||||||||||| Sbjct 151 CCCTTGTCGATTCCGAGAA-GA-CGTGGCTTGTGCAATGTGAAGAAGTAAAGGTTCTTCC 208 Query 538 TTTATCTGAAATAATCCAATGGCGAATTGGGATTTCTTCTTATAAGGCGCTTTGTTGGTT 597 ||| | ||||||| |||||||||||| ||||| |||||||| ||||| |||||| |||| Sbjct 209 TTTGTTTGAAATAGTCCAATGGCGAAGCGGGATCTCTTCTTACAAGGCACTTTGTAGGTT 268 Query 598 TCTTGGAGAGGTAATGAAGCCTCTTGTTGGTG-TTTGGGTTCATCAAAACCCTGAACTTG 656 ||||| |||||| |||||||||||||||| | |||||||||| |||||||||||||||| Sbjct 269 TCTTGTAGAGGTGGTGAAGCCTCTTGTTGG-GATTTGGGTTCAACAAAACCCTGAACTTG 327 Query 657 GGAATGTTGTTTATGTCATGCCTGGTTTCTTGTCTGTTGTTGGGTGTCGGATAATTCCAC 716 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 328 GGAATGTCGTTTATGTCATGCCTGGTTTCTTGTCTGTTGTTGGGTGCCGGATAATTCCAC 387 Query 717 AAGAGGTTGGTCCTTTGGGGATTGAGGAGG-CTCGAGTTATGTGGTCACCTGTGTTTGAG 775 || |||||||||||||| ||||| | |||| | ||||||| ||||||||||||||||||| Sbjct 388 AAAAGGTTGGTCCTTTGTGGATTCAAGAGGGC-CGAGTTAAGTGGTCACCTGTGTTTGAG 446 Query 776 ATTATCTGTGGTTTTGATGGCTCCGCCAAGTTTTTCCTCCATGGGAGAGATGGAA-AAGT 834 || ||||| |||||||||||||| || ||||||||| ||||| ||||| || ||| Sbjct 447 ATAATCTGCGGTTTTGATGGCTCTACCGGGTTTTTCCTTCATGGAAGAGACA-AAGAAG- 504 Query 835 GCAAT-GCTGTCTGCACCCTGGTTTCGTTAGGGGCATTGAGAAGAGTTGTAATGTGCTTC 893 ||| | ||| | | |||||||||| |||| |||||||||||||||||| ||| |||||| Sbjct 505 GCAGTTGCT-TGT--ACCCTGGTTTTGTTATGGGCATTGAGAAGAGTTGCAATTTGCTTC 561 Query 894 TACTTGAGGTTGAGACGAGGCGAGAGAAGAAGTT-GTGCAATGAGATTGATGAGACTGTG 952 ||| || ||||| ||||||||||||||| ||| ||||||||||||||| |||| | | Sbjct 562 AACTCGAAATTGAGCCGAGGCGAGAGAAGA-GTTCGTGCAATGAGATTGA-GAGAG-GAG 618 Query 953 T-T---GTT-GGTAGAGACGG-GGGTTCAG-TTACCATTTCGCAAACTAC-CATTTAGTT 1004 | | || || | || ||| || || |||||| | | || | | ||||| Sbjct 619 CCTCAAGAAAGGGGGAAAAGGAGGGAG-AGGTT-CCATTTTGGATGCT-CGCTTTTAGCG 675 Query 1005 ATAGAAGGAATTTACTTCACATA--GTGACAAGC-ACTGTTGGTATACCTGTACCTG-AT 1060 |||||| || ||||| || ||| ||||||||| | ||| ||||||| ||| || | Sbjct 676 ATAGAAAAAACTTACT-CA-ATATTGTGACAAGCCA-TGTAGGTATACATGTGG-TGGAG 731 Query 1061 CTATCAAGTGAAAAGTTATTTCCTACGTCAAAAGATGATGAAGCGGTGTTGTTGGAACGC 1120 | || || || || ||||||||| || ||||||||||||||||| ||||| | |||||| Sbjct 732 CCATTAAATGGAAGGTTATTTCCCACATCAAAAGATGATGAAGCAATGTTGGTCGAACGC 791 Query 1121 AGAACCATGCTTCTT-AAAATGCACAAGTTTGGTGGTGATTGGAATCACATGAACCTGGA 1179 ||||||||||| ||| |||||||||||||||||||| | ||||| ||||||| |||| Sbjct 792 AGAACCATGCT-CTTTAAAATGCACAAGTTTGGTGGAAAGTGGAAGAACATGAATTTGGA 850 Query 1180 GGA 1182 ||| Sbjct 851 GGA 853 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 80408507195 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5