BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G40100.1 Length=3101 Score E Sequences producing significant alignments: (Bits) Value Ahg947767 jgi|Araly1|947767|scaffold_703996.1 2165 0.0 Ahg471969 jgi|Araly1|471969|fgenesh2_kg.1__1923__AT1G17600.1 1219 0.0 > Ahg947767 jgi|Araly1|947767|scaffold_703996.1 Length=3002 Score = 2165 bits (1172), Expect = 0.0 Identities = 1298/1360 (95%), Gaps = 4/1360 (0%) Strand=Plus/Plus Query 23 CTCTTCTAAGCCAAGGTCTTT-GACAATGGCTTCCTCATCCGCATCTCGTGCATCCAGCT 81 |||||| || |||| || ||| |||||||||||||||||| || ||||||||||||| || Sbjct 1 CTCTTCCAAACCAA-GTTTTTCGACAATGGCTTCCTCATCTGCTTCTCGTGCATCCAACT 59 Query 82 ATGATGTCTTCTTAAGTTTCCGTGGGGAAGACACTCGACATTCTATCGTCAGCCATTTGT 141 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 60 ATGATGTCTTCCTAAGTTTCCGTGGGGAAGACACTCGACATTCTATCGTCAGCCATTTGT 119 Query 142 ACGAAGCACTTACCAGCAGAGGAATTGCTACCTTCAAAGACGACAAAAGGCTTGAGCTAG 201 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 120 ACGAAGCACTTACCAGCAGAGGAATTGCTACATTCAAAGACGACAAAAGGCTTGAGCTAG 179 Query 202 GTGATCACATTTCTGAAGAACTCCAAAGAGCCATTGAGGGTTCAGATTTTGTTGTCGTGG 261 | ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 180 GCGATCACATTTCTGAAGAACTCCAAAGAGCCATTGAGGGTTCAGATTTCGCTGTCGTGG 239 Query 262 TTCTCTCAGAGAACTACCCTACTTCTAGGTGGTGCTTAATGGAGCTCCAATCGATAATGG 321 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 240 TTCTCTCAGAGAACTACCCTACTTCTAGGTGGTGCTTAATGGAGCTCCAATCGATAATGA 299 Query 322 AGCTTCAGATGGAGGGAAGACTTGGTGTCTTTCCCGTCTTCTACAGAGTAGAACCCTCTG 381 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 300 AGCTTCAGGTGGAGGGAAGACTTGGTGTCTTTCCCGTCTTCTACAGTGTAGAACCCTCTG 359 Query 382 CAGTGAGGTATCAGCTAGGAAGTTTCGATCTAGAAGGGTACCAACGTGATCCACAAA-TG 440 | ||||||||||||||||||||||||||||| |||| |||||||||||||||| ||| || Sbjct 360 CCGTGAGGTATCAGCTAGGAAGTTTCGATCTTGAAGAGTACCAACGTGATCCA-AAACTG 418 Query 441 GCTGATATGGTTCCCAAGTGGAGACAAGCTCTTAAACTGATTGCCGATCTTTCAGGCGTG 500 || ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 419 GCGGATGTGGTTCCCAAGTGGAGACAAGCTCTTAAACTGATTGCTGATCTTTCAGGCGTG 478 Query 501 GCATCGGGACAATGCATTGATGAGGCAACTATGGTTCGGAAAATTGTCGAAGATATTTCA 560 ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 479 GCATCCGGACAGTGCATTGATGAGGCAACTATGGTTCGGAAAATTGTCGAAGATATTTCA 538 Query 561 AAGCGCAAGACATTGAAGCATAAGATAGATTTCAGAAATTTTGTTGGTGTGGATACTCAC 620 | ||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||| Sbjct 539 AGGCGCAAGACATTGAAGCATAAGATAGACTTCAGAAATATTGTTGGGGTGGATACTCAC 598 Query 621 CTGCAAGGTCTCAAGTCGCTCTTGGACATGGACTCCAATAATGATGAGGTTCGTATGATT 680 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 599 ATGCAAGGTCTCAAGTTGCTCTTGGACATGGACTCCAATAATGATGAGGTTCGTATGATT 658 Query 681 GGAATATGGGGAATGGGAGGCATTGGAAAAACCACCATCGCCAAGTGTCTCTATGACCAG 740 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 659 GGAATCTGGGGAATGGGAGGCATTGGAAAAACCACCATCGCCAAGTGTCTTTATGACCAG 718 Query 741 CTCTCATCACAATTTACAGCTAGTTATTTCACACAAGACATTAAAGGTATTCATAAAGAG 800 |||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||| Sbjct 719 CTCTCATCTCAATTTACAACTAGTTATTTCACACAAGACATTAAGGGTATTCATAAAGAC 778 Query 801 CTTGATCTACTGCATTTGCAAAACAGACTTCTCTACAATACCCTCGGTGATGATATTATG 860 ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| | Sbjct 779 CTTGATCTACTGCATTTGCAAAACAAACTTCTCTACAATACCCTTGGTGATGATATTAGG 838 Query 861 CCGTGGAGTGTGGAAGCTGGACGCGAGGTCATAGCGGCAAGACTTGGGAACCACAAGGTT 920 |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 839 CCGTGGAGCGTGGAAGCTGGACGCGAGGTCATAGCGTCAAGACTTGGGAACCACAAGGTT 898 Query 921 CTTCTTGTGCTTGATGGTGTGGATAAACTGGTACAGATCCATGCTCTGGCAAAAGAGACA 980 |||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct 899 CTTCTTGTACTTGATGGTGTGGATAAATTGGCCCAGATCCATGCTCTGGCAAAAGAGACG 958 Query 981 AGATGGTTTGGTCGTCAGAGCCGAATCATCATAACCACCCGAGACAAGGGCTTGCTCAAT 1040 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 959 GGATGGTTTGGTCGTCAGAGCCGAATCATCATAACCACCCGAGATAAGGGCTTGCTCAAT 1018 Query 1041 AGTTGTGGAGTAAAAACCATCTATGATGTTAAGTGCTTGGACGACAAGGATTCCCTGCAG 1100 |||||||||||||||||||| ||||||||||| ||||||||||| ||||||||| ||||| Sbjct 1019 AGTTGTGGAGTAAAAACCATTTATGATGTTAAATGCTTGGACGATAAGGATTCCTTGCAG 1078 Query 1101 ATGTTTAAACAGATTGCTTTTGAAGGAGGCAGTCCTCCTTCTGTTGATTTTGAACAGCTC 1160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1079 ATGTTTAAACAGATTGCTTTTGAAGGAGGCAGTCCTCCTTCTGTTGATTTTGAACAACTC 1138 Query 1161 TCAATCCGAGCAGCTCGGCTTGCGCACGGGCTTCCTTCTGCCCTTCAAGCCTATGCCTTA 1220 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1139 TCAATCCGAGCAGCTCGGCTTGCTCACGGGCTTCCTTCTGCCCTTCAAGCCTATGCCTTA 1198 Query 1221 TTTCTCCGTGGAAGGGCCAACTCTCCTGAAGAATGGGAAGAAGCAGTATGTGGACTTGAA 1280 |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1199 TTTCTCCGCAGAAGGGCCAACTCTCCTGAGGAATGGGAAGAAGCAGTATGTGGACTTGAA 1258 Query 1281 AGTACTCCTGACGAGAATATAATGGAAATCCTGAAAATTAGCTACGAGGGTTTAGCAAAA 1340 |||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct 1259 AGTACTCCTGACGACAATATAATGGAAATCTTGAAAATTAGCTACGAGGGCTTAGCAAAA 1318 Query 1341 GCACATCAGAATGCTTTTCTCCATGTTGCATGTCTCTTTA 1380 |||||||||||||||||||||||||||||||||||||||| Sbjct 1319 GCACATCAGAATGCTTTTCTCCATGTTGCATGTCTCTTTA 1358 Score = 1151 bits (623), Expect = 0.0 Identities = 759/825 (92%), Gaps = 8/825 (1%) Strand=Plus/Plus Query 1904 TCATTTGAGGAAACTAGATGTGACGGGATCTAAGAATCTCAAACAACTTCCAGATCTTTC 1963 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1801 TCATTTGAAGAAACTAGATGTGACGGGATCTAAGAATCTCAAACAACTTCCAGATCTTTC 1860 Query 1964 ATGT-GCCGAGGAGCTTGACGAGTTGCTTCTAGAACAATGCAAGAGACTAAAAGGAATTC 2022 |||| || || |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1861 ATGTAACC-AGAAGCTTGACGAGTTGATTCTAGAACAATGCAAGAGACTAAAAGGAATTC 1919 Query 2023 CAGAGTCCATTGCAGAGAGGTCTACCCTAGGCAGGCTTAATCTATCATACTACGGTGGGG 2082 ||||||| |||| ||| ||||||||| ||||||||||||| |||||||||||||||||| Sbjct 1920 CAGAGTCAATTGGAGAAAGGTCTACCTTAGGCAGGCTTAACCTATCATACTACGGTGGGC 1979 Query 2083 CTAAGAATCCCATGGGTGTTGTTATACAGAAAGTTTCTCAGACGCAACGTATTACATTGT 2142 |||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||| Sbjct 1980 CTAAGAGTCCCATGGGTGTTGTTATACGGAAAGTGTCTCAGACGCAACGTATTACATTGG 2039 Query 2143 TGTTCCCAACTTCAAGCGTGGAAATGCAACTTATGAATATATCAATCACGGGAGACATT- 2201 |||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct 2040 AGTTCCCAACTGCAAGCGTGGAAATGCAACTTATGAATATGTCAATCATGGGAGACATTA 2099 Query 2202 AGATTTCGTGTTTTTGCAGATTTTGAAGGATATGCTGAATACTTCTCCTTTAGTACTGAG 2261 || |||||| |||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 2100 AG-TTTCGTATTTTCACAGATTTTGAAGGATATGCTGAATACTTCTCCTTTAGTACTGAG 2158 Query 2262 CAAAAGATCCATGCTACAAGGACAGTAAGTGTCCACCAAGCTCCTCGGCTCATCTCGGAG 2321 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 2159 CAAAAGATCCATGCTACAAGGACAGTAAGTGTCCACCAAGCTCCTCGGCTCGTCTCGGAG 2218 Query 2322 CTTAACAAATCTACTACACTCAATATCAGGAGGTTCAGCTACAAAGAGAACGGTCGACCT 2381 || |||||||||||| | ||||||||||||||||||||||||||||||||| ||||||| Sbjct 2219 CTCAACAAATCTACTTCGCTCAATATCAGGAGGTTCAGCTACAAAGAGAACATTCGACCT 2278 Query 2382 GTCAC-TTTACACAGCTTTCCAGATATTCCTGGCCTGAAACAGCTAGAACTAGTCAACTT 2440 ||||| ||| ||||| |||||| |||| |||| |||| || ||||| ||||||||||||| Sbjct 2279 GTCACCTTT-CACAGTTTTCCATATATACCTGCCCTGGAAGAGCTAAAACTAGTCAACTT 2337 Query 2441 AAACATCCAAAAACTGTCAGATGGGATTGGTCACTTTGAGTTCCTAGAAAATCTGGATCT 2500 ||| ||||||||||| |||||||||||||||||||| || |||||||||| ||||| || Sbjct 2338 AAATATCCAAAAACTATCAGATGGGATTGGTCACTTGGAACTCCTAGAAAAACTGGA-CT 2396 Query 2501 -CAGCGGAAATGATTTTGAGAATTTACCAGAAGATATGAATAGACTTTCCCGATTGAAAA 2559 ||||||||||||||||||||| |||||||||||||||||||||||||| || | |||| Sbjct 2397 TCAGCGGAAATGATTTTGAGAACTTACCAGAAGATATGAATAGACTTTCTCGGCTAAAAA 2456 Query 2560 CTCTCTGTCTCCGAAACTGCAGCAAACTCAAGGAATTGCCAGAGCTAACTCAGGTGCAGT 2619 |||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct 2457 CTCTCTGTCTTCGAAACTGGAGCAAACTCAAGGAATTGCTAGAGCTAACTCAGGTGCAGT 2516 Query 2620 CACTCACTCTTTCTAACTGTAAGAACCTCAGATCTTTGGTGAAAATCTCTGATGCAAGTC 2679 ||||||||||||| ||||||| || ||||||||| ||||||||| |||||||||||||| Sbjct 2517 CACTCACTCTTTCCAACTGTAGGAGCCTCAGATCATTGGTGAAACCCTCTGATGCAAGTC 2576 Query 2680 AAGATCCAAGCTTATACAGTTTGCTTGAGCTTTGCCTTGACAACT 2724 ||||||| || ||||| ||||||||||||||||||||||||||| Sbjct 2577 AAGATCCGGGCATATACTGTTTGCTTGAGCTTTGCCTTGACAACT 2621 Score = 425 bits (230), Expect = 8e-118 Identities = 290/319 (91%), Gaps = 3/319 (1%) Strand=Plus/Plus Query 2785 ATCTCAGCAGCCATGACTTTAAGAAACTGCCATCAAGCATCAGAGATCTTACCTCATTGG 2844 |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| Sbjct 2622 ATCTCAGCAGCCATGACTTTAAGACACTGCCAGCAAGCATCAGAGATCTTACCTCATTGG 2681 Query 2845 TAACTCTCTGCCTGAATAACTGCAAGAAACTCAAATCACTGGAAGAACTCCCACTGAGCC 2904 ||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||| Sbjct 2682 TAACTCTCTGCCTCAATAACTGCAAGAAACTCAAATCGGTGGAAGAACTTCCACTGAGCC 2741 Query 2905 TCCAGTTTCTCGACGCAAAGGGTTGTGATTCTCTTGAAGCTGATGATTTAGAACATTTCA 2964 | || ||||| || ||| ||||||||||||||||||||||||||| |||||||||||| | Sbjct 2742 TTCAATTTCTAGATGCACAGGGTTGTGATTCTCTTGAAGCTGATGCTTTAGAACATTTTA 2801 Query 2965 AAGGGAGAGTAAACAGAGAGGTATCAGCACAACC-ACATAGTGCTCGCTTCCAAGAAACG 3023 ||| |||| |||||| ||||||| ||||||| || | |||||||||||||||||||||| Sbjct 2802 AAGAGAGACTAAACAAAGAGGTACCAGCACATCCGAG-TAGTGCTCGCTTCCAAGAAACG 2860 Query 3024 GAGATGCCAAGTTACGAGCAGGATCACCAAGCCAGAAAGA-GTCGCCTACCCAAGTTCCT 3082 ||||| | |||||||| |||||||||||||||| ||| | ||||||||||||||||||| Sbjct 2861 CAGATGACGAGTTACGAACAGGATCACCAAGCCACAAAAAAGTCGCCTACCCAAGTTCCT 2920 Query 3083 ATGCTGCTCATATTTCTAG 3101 |||||||||| |||||||| Sbjct 2921 ATGCTGCTCACATTTCTAG 2939 Score = 305 bits (165), Expect = 1e-81 Identities = 214/238 (90%), Gaps = 2/238 (1%) Strand=Plus/Plus Query 1659 ACCGGTGTTTTTAGCAGAATGTATAAACTTAGGTTTTTAAAGGTCTACAAGCATGTTAAC 1718 |||||||||||| ||| |||| |||||||||||||| | ||||| |||||||||||| || Sbjct 1514 ACCGGTGTTTTTGGCAAAATGAATAAACTTAGGTTTGTCAAGGTTTACAAGCATGTTGAC 1573 Query 1719 GAGAGAGAATCGATGTTGCAGGTGATTCCTGAAGATGAATACCCTTCCATAAATTGT-CT 1777 || |||| ||||| | |||||||||||| ||||||| ||||||||||||| ||| || | Sbjct 1574 GACAGAGGATCGAGGCTGCAGGTGATTCGTGAAGATCAATACCCTTCCATGAATGGTAC- 1632 Query 1778 CCTACTCCATTGGGACGCATTTCCATTGAGCAAATTTCCTCTCAGGTTTAATACATATTG 1837 ||||||||| |||||||||||||||||||||| ||| ||| ||| |||||| |||||||| Sbjct 1633 CCTACTCCACTGGGACGCATTTCCATTGAGCACATTGCCTTTCACGTTTAACACATATTG 1692 Query 1838 TCTTGTTGAACTCAATCTGCGTCACAGCAACCTAGAAACACTCTGGAGTGGAGTACTG 1895 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1693 TCTTGTTGAACTCATTCTGCGTCACAGCAACCTAGAAACACTCTGGAGTGGAGTACTG 1750 > Ahg471969 jgi|Araly1|471969|fgenesh2_kg.1__1923__AT1G17600.1 Length=2892 Score = 1219 bits (660), Expect = 0.0 Identities = 1641/2098 (78%), Gaps = 134/2098 (6%) Strand=Plus/Plus Query 48 ATGGCTTCCTCATCCGCATCTCGTGCATC-CAGCTATGATGTCTTCTTAAGTTTCCGTGG 106 ||||| ||||| || ||| |||||| ||| || || || |||||| | || ||||| || Sbjct 1 ATGGCGTCCTCCTCTGCACCTCGTGTATCGAAG-TACGACGTCTTCCTCAGCTTCCGAGG 59 Query 107 GGAAGACACTCGACATTCTATCGTCAGCCATTTGTACGAAGCACTT-ACCAGCAGAGGAA 165 |||||||| ||| | | ||||| || ||||| |||| ||||||| | |||||||||| Sbjct 60 AGAAGACACCCGAAAAACAATCGTTAGTCATTTATACGCAGCACTTGA-TAGCAGAGGAA 118 Query 166 TTGCTACCTTCAAAGACGACAAAAGGCTTGAGCTAGGTGATCACATTTCTGAAGAACTCC 225 ||| ||| |||||||||||| ||||||||||| |||| |||||||||||||| ||||||| Sbjct 119 TTGTTACTTTCAAAGACGACCAAAGGCTTGAGATAGGAGATCACATTTCTGATGAACTCC 178 Query 226 AAAGAGCCA-TTGAGG-GTTCAGA-TTTTGTTGTCGTGGTTCTCTCAGAGAACTACCCTA 282 |||| || | | || |||| || ||| | ||| ||||||||||| ||||||||| ||| Sbjct 179 GCAGAG-CACTAG-GGAGTTC-GAGTTTCGCTGTTGTGGTTCTCTCCGAGAACTACGCTA 235 Query 283 CTTCTAGGTGGTGCTTAATGGAGCTCCAATC-GATAATGGAGCTTCA-GATGGAGGGAAG 340 |||| |||||||||||| |||| || ||| | ||||||||||||| | || |||||||| Sbjct 236 CTTCCAGGTGGTGCTTATTGGAACTTCAA-CTGATAATGGAGCTT-ATGAAAGAGGGAAG 293 Query 341 ACTTGGTGTCTTTCCCGTCTTCTACAGAGTAGAACCCTCTGCAGTGAGGTATCAGCTAGG 400 ||||| || |||||| ||||||| ||||||| || || | |||||| |||||||||| Sbjct 294 ACTTGAAGTATTTCCCATCTTCTATGGAGTAGATCCTTCCGTGGTGAGGCATCAGCTAGG 353 Query 401 AAGTTTCGATCTAGAAGGGTACCAACGTGATCCACAAATGGCTGATATGGTTCCCAAGTG 460 |||||||| | ||||| ||| ||| | | ||| ||||||| |||| ||||| || ||| Sbjct 354 AAGTTTCGCTTTAGAAAAGTATCAA-G-G-TCCTGAAATGGCGGATAAGGTTCTCAGGTG 410 Query 461 GAGACAAGCTCTTAAACTGATTGCCGATCTTTCAGGCGTGGCATCGGGACAATGCATTGA 520 |||| |||||||||| || || ||| ||||||||||||||| || | || ||| |||| Sbjct 411 GAGAGAAGCTCTTAACCTAATCGCCAATCTTTCAGGCGTGGTTTCAAGCCACTGCGTTGA 470 Query 521 TGAGGCAACT-ATGGTTCGGA-AAATTGTCGA-AGATATTTCAAAG-CGCAAGACATTGA 576 |||||| | | |||||| ||| |||||| | | ||||||||| ||| || ||||||| Sbjct 471 TGAGGCTA-TAATGGTT-GGAGAAATTG-CCAGAGATATTTC-AAGACGTGTGACATTGT 526 Query 577 AGCATAAGATAGATTTC-AGAAATTTTGTTGGTG-TGGATA-CTCACCTGCAAGGTCTCA 633 |||||| ||||| || | ||| ||||||| | | || | ||||| || ||||||| | Sbjct 527 TGCATAAAATAGA-CTCTGGCAATATTGTTGG-GAT-GAAAGCTCACATGGAAGGTCTTA 583 Query 634 AGTC-GCTCTTGGA-CATGGACTCCAATAATGATGAGGTTCGT-ATGATTGGAATATGGG 690 | || | |||||| | |||| ||| | ||||||||| | ||| | ||||| |||| Sbjct 584 A-TCATCGCTTGGATC-TGGAATCC----A--ATGAGGTTC-TCATGGTAGGAATCTGGG 634 Query 691 GAATGGGAGGCATTGGAAAAACCACCATCGCCAAGTGTCTCTATGACCAGCTCTCATC-A 749 |||||||||| ||||| |||||| |||| || |||||||||||||||||||| ||| | | Sbjct 635 GAATGGGAGGAATTGGGAAAACCTCCATTGCTAAGTGTCTCTATGACCAGCTTTCACCTA 694 Query 750 CAATTTACAGCT-AGTTATTTCACACAAGACATTAAAG-GTATTCA-TAAAG--A---G- 800 ||||| ||||| | || ||||||| || ||||| ||| || || | ||||| | | Sbjct 695 -AATTTCCAGCTCA-TTGTTTCACAGAAAACATT-AAGAGTGTT-AGTAAAGATATTGGC 750 Query 801 CTTGATCTACTGCATTTGCAAAACAG-ACTTCTCTACAATACCCTCGGTGATGATATTAT 859 | ||||||| || ||||||||| || | | |||| ||||| |||| |||||||||||| Sbjct 751 CATGATCTAAAGCGTTTGCAAAA-AGAAATGCTCTGCAATATCCTCTGTGATGATATTAG 809 Query 860 GCCGTGGAGTGTGGAAGCTGGACGCGAGGTCATAGCGGCA-AGACTTGGGAACCACAAGG 918 | ||||| |||||||||||| || | | ||| | | ||||||||||| || | || Sbjct 810 GTTATGGAGCGTGGAAGCTGGATGCCAAGAGATA-AAGAAGAGACTTGGGAATCAGAGGG 868 Query 919 TTCTTCTTGTGCTTGATGGTGTGGATAAACTGGT-ACAGATCCATGCTCTGGCAAAAGAG 977 || ||||||||||||| |||||||||||| | || |||| | |||||| |||||||||| Sbjct 869 TTTTTCTTGTGCTTGACGGTGTGGATAAAGT-GTCACAGGTGCATGCTTTGGCAAAAGAT 927 Query 978 ACAAGA-TGGTTTGGTCGTCAGAGCCGAATCATCATAACCACCCGAGACAAGGGCTTGCT 1036 | || | |||||||||| | ||||||||| |||||||| || ||||| | ||||||||| Sbjct 928 A-AAAACTGGTTTGGTCCTGGGAGCCGAATTATCATAACTACTCGAGATATGGGCTTGCT 986 Query 1037 CAATAGTTGTGGAGTAAAAACCATCTATGATGTTAAGTGCTTGGACGACAAGGATTCCCT 1096 ||||| ||||||||| ||| | | ||||| |||||||||||||| || |||||| |||| Sbjct 987 CAATACCTGTGGAGTAGAAATCGTTTATGAGGTTAAGTGCTTGGATGATAAGGATGCCCT 1046 Query 1097 GCAGATGTTTAAACAGATTGCTTTTGAAGGAGGCAGTCCTCCTTCTGTT-GATTTTGAAC 1155 || ||||||||||||||||||||||||||||| | | |||| ||| | | |||||| | Sbjct 1047 CCACATGTTTAAACAGATTGCTTTTGAAGGAGG-ACT--TCCTCCTGATAG-TTTTGAGC 1102 Query 1156 AGCTCTCAATCCGAGCAGCTCGGCTTGCGCACGGGCTTCCTTCTGCCCTTCAAGCCTATG 1215 | |||||| ||||||| |||||||||| |||||||||||||||||| ||||||| |||| Sbjct 1103 AACTCTCACTCCGAGCTTCTCGGCTTGCTCACGGGCTTCCTTCTGCCATTCAAGCTTATG 1162 Query 1216 CCTTATTTCTCCGTGGAAGGGCCAACT-CTCCTGAAGAATGGGAAGAAGCAGT-ATGTGG 1273 |||||||||||||||||||| || | ||||||| | |||||||||||| | | ||| Sbjct 1163 CCTTATTTCTCCGTGGAAGGACCG-CGACTCCTGATGGGTGGGAAGAAGCATTGA-GTGC 1220 Query 1274 ACTTGAAAGTACTCCTGACGAGAATATAATGGAAATCCTGAAAATTAGCTACGAGGGTTT 1333 ||||||||| | || |||||||||||||||||||||| ||||||| ||||||||||| || Sbjct 1221 ACTTGAAAGCAGTCTTGACGAGAATATAATGGAAATCTTGAAAATCAGCTACGAGGGCTT 1280 Query 1334 AGCAAAAGCACATCAGAATGCTTTTC-TCCATGTTG-CATGTCTCTTTAATGGAGACACT 1391 | ||||| |||||||||||| | ||| | ||||||| | |||||||| |||||||||||| Sbjct 1281 ACCAAAACCACATCAGAATG-TATTCCTTCATGTTGTC-TGTCTCTTCAATGGAGACACT 1338 Query 1392 TTCCGGCGTGTCACTTCACTACTTGATGTTAGCAGAA-TGGAAAGTAACTTGTGGATGAG 1450 ||| |||| ||||||| || ||| ||| || | | | |||| | ||||||| || Sbjct 1339 CTCCAGCGTATCACTTCCCTTCTTCATGGCCCCATACCTC-AGAGTAGCCTGTGGATAAG 1397 Query 1451 AGTTTTAGCAGAGAAATCTCTCATCAATATAACAAGTAATGGATATGTAACCCTGCATAA 1510 ||||||||||||||||||||||||||| ||| ||| |||||||| ||||| | |||| || Sbjct 1398 AGTTTTAGCAGAGAAATCTCTCATCAAAATATCAACTAATGGATCTGTAATCATGCACAA 1457 Query 1511 GTTGGTTGAACAAATGGGAAGAGAAATTAT--GC-----T-TGCCAGTGG----AAAATT 1558 |||||| ||||||||||| ||||||||||| || | || | ||| |||||| Sbjct 1458 GTTGGTAGAACAAATGGGTAGAGAAATTATCCGCGACAATATGTCTTTGGCTCGAAAATT 1517 Query 1559 CATCGGGGATCCGGA-G-ACAATTCATGATAC-T---CTTG--GA-ATG--GGA---CAA 1604 | || ||||||| | | | ||||| |||| | | ||| || | | ||| ||| Sbjct 1518 CCTCAGGGATCCT-ATGGA-AATTCGTGATGCCTTGGCTTTCAGAGACGCAGGAGAACAA 1575 Query 1605 ACTGAAAGCATCTCCCTACACATATGTGAAATGACCTGTGCATTTTCGATGGCGACCGGT 1664 |||||| |||| | |||||||| ||||| ||||||||| || || |||| | || || Sbjct 1576 ACTGAATGCATGTGCCTACACACGTGTGAGTTGACCTGTGTGTTGTCCATGGAGGCCAGT 1635 Query 1665 GTTTTTAGCAGAATGTATAAACTTAGGTTTTTAAAGGTCTACAAGCATGTTA-ACGAGAG 1723 ||| || || | ||| |||| || | |||| | ||||| ||||||||||| | | | || Sbjct 1636 GTTGTTGGCCGTATGCATAATCTCAAGTTTCTCAAGGTTTACAAGCATGT-AGATTACAG 1694 Query 1724 AGAATCGATGTTGCAGGTGATTCCTGAAGATGAATACCCTTCCATAAATTGTCT-C--CT 1780 ||| |||| | |||| | ||||| || | | | || | || | | | || | || Sbjct 1695 AGAGTCGAAGCTGCAACTCATTCCAGACCAACAGTTCC-TGCC-TCG-TAGCCTACGGCT 1751 Query 1781 ACTCCATTGGGACGCATTTCCATTGAGCAAATTT-CCTCTCAGGTT-TAATACATATTGT 1838 | |||||||||| |||||||||||||| | | ||| || || | | || ||| || | Sbjct 1752 ATTCCATTGGGATGCATTTCCATTGAG-AGCCCTGCCT-TCCGGCTCTGATCCATGTTTT 1809 Query 1839 CTTGTTGAACTCAATCTGCGTCACAGCAACCTAGAAACACTCTGGAGTGG-A-GTACTGA 1896 |||||||||||||||||||||||||| | ||||||| ||| ||| | | | || ||| Sbjct 1810 CTTGTTGAACTCAATCTGCGTCACAGTGATTTAGAAACTCTCAGGACTTGTATGT--TGA 1867 Query 1897 AGTTTGGTCATTTGAGGAAACTAGATGTGACGGGATCTAAGAATCTCAAACAACTTCCAG 1956 || | | || || || |||||||||||||||||||||| ||||||| |||||||||| Sbjct 1868 AGA--G-T--TT-GAAGAGACTAGATGTGACGGGATCTAAGTATCTCAAGCAACTTCCAG 1921 Query 1957 ATCTTTCATGTGCCGAGGAG-CTTGACGAGTTGCTTCTAGAACAATGCAAGAGACTAAAA 2015 |||||||| || | | ||| ||||| || |||||||| |||||||||| |||||| | Sbjct 1922 ATCTTTCAAGTATC-ACGAGTCTTGAGGAATTGCTTCTGGAACAATGCACGAGACTGGAT 1980 Query 2016 GGAATTCCAGAGTCCATTGCAGAGAGGTCTACCCTAG-GCAGGCTTAATCTATCATAC 2072 || |||||||||| |||| | | |||||||||||| | || ||||| ||||| ||| Sbjct 1981 GGCATTCCAGAGTGTATTGGAAAAAGGTCTACCCTAAAGAAG-CTTAAGCTATCCTAC 2037 Score = 165 bits (89), Expect = 2e-39 Identities = 149/177 (84%), Gaps = 8/177 (5%) Strand=Plus/Plus Query 2790 AGCAGCCATGACTTTAAGAAACTGCCATCAAGCATCAGAGATCTTACCTCATTGGTAACT 2849 ||||||||||| ||| ||| | ||||| ||||||||||||||||||||||||||||||| Sbjct 2659 AGCAGCCATGATTTTGAGACATTGCCACCAAGCATCAGAGATCTTACCTCATTGGTAACA 2718 Query 2850 CTCTGCCTGAATAACTGCAAGAAACTCAAATCACTGGAA-GAACTCCC-ACTGAGC-CTC 2906 || ||||| |||||||||||||||||||||||| ||||| ||| |||| || | | ||| Sbjct 2719 CTTTGCCTTAATAACTGCAAGAAACTCAAATCAGTGGAAAGAA-TCCCCAC-GT-CTCTC 2775 Query 2907 CAGTTTCTCGACGCAAAGGGTTGTGATTCTCTTGAAGCTGAT-GATTTAGAACATTT 2962 || ||||| || ||| | || |||||||| || ||||||| | | | |||||||||| Sbjct 2776 CAATTTCTGGATGCACACGGCTGTGATTCCCTCGAAGCTGGTTG-TGTAGAACATTT 2831 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 117127503375 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5