BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G40870.1 Length=1842 Score E Sequences producing significant alignments: (Bits) Value Ahg493890 jgi|Araly1|493890|fgenesh2_kg.7__3323__AT5G40870.1 2739 0.0 Ahg936446 jgi|Araly1|936446|scaffold_500637.1 1530 0.0 Ahg896655 jgi|Araly1|896655|Al_scaffold_0005_621 340 2e-92 > Ahg493890 jgi|Araly1|493890|fgenesh2_kg.7__3323__AT5G40870.1 Length=1845 Score = 2739 bits (1483), Expect = 0.0 Identities = 1740/1859 (94%), Gaps = 37/1859 (2%) Strand=Plus/Plus Query 1 CGTTGAACAGAATCGTTGTCACTTGTTCAGTCTTCACTACGGAGCTGttttttttCGATT 60 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1 CGTTGAACAGAATCGTTGTCACTTG-TCAGTCTTCACTACGGAGCTGTTTTTTTTCGATT 59 Query 61 CGCCGGAAAAATCATAAAATCCAAA-TCTACAACCACCTTTTTATCGCAATCCAATGCCG 119 |||||||||||||| ||| | |||| ||| |||||||| || |||| |||||||||||| Sbjct 60 CGCCGGAAAAATCACAAATTTCAAATTCTGCAACCACCGATTCATCGGAATCCAATGCCG 119 Query 120 GAAGATTCTTCTTCTTTAGACTACGCGATGGAGAAGGCATCAGGGCCTCACTTCTCCGGT 179 || ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| Sbjct 120 GAGGATTCTTCTTCAATAGACTACGCGATGGAGAAGGCATCGGGGCCTCACTTCTCCGGT 179 Query 180 CTTCGCTTCGACGGCCTTCTCTCTTCTTCTCCACCCAATTCCTCCGTCG--TC-T--C-- 232 |||||||||||||||||||||||||||||||||||||||||||||| || || | | Sbjct 180 CTTCGCTTCGACGGCCTTCTCTCTTCTTCTCCACCCAATTCCTCCGCCGTCTCTTCACTT 239 Query 233 T-TCA-CTCCGATCAGCTGTTTCTTCTTCTTCTCCGTCTTCTTCCGATCCCGAAGCGCCT 290 | ||| ||||||||||| |||||||| ||||||||| |||||||||||||||| || || Sbjct 240 TCTCACCTCCGATCAGCCGTTTCTTCCTCTTCTCCGGCTTCTTCCGATCCCGACGCTCCC 299 Query 291 AAGCAGCCCTTCATTATCGGGGTTTCTGGTGGTACGGCTTCTGGTAAGACCACGGTCTGT 350 || |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct 300 AAACAGCCCTTCATTATCGGGGTTTCTGGTGGTACGGCTTCTGGTAAAACCACAGTCTGC 359 Query 351 GACATGATAATCCAGCAACTTCATGACCATCGTGTCGTTTTAGTTAATCAGGATTCCTTT 410 || ||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||| Sbjct 360 GATATGATAATCCAGCAACTTCATGATCATCGTGTTGTTCTAGTTAATCAGGATTCCTTT 419 Query 411 TATCGTGGTTTGACATCTGAGGAGTTGCAGCGTGTGCAAGAGTATAACTTTGATCATCCT 470 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 420 TATCGTGGTTTGACATCTGAGGAGTTGCAGCGTGTGCAAGAGTACAACTTTGATCATCCC 479 Query 471 GATGCGTTTGACACTGAGCAGCTTTTGCATTGTGCTGAGACTCTCAAGAGCGGGCAACCC 530 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 480 GATGCTTTTGACACTGAGCAGCTTTTGCATTGTGCTGAGACTCTCAAGAGCGGGCAACCC 539 Query 531 TATCAAGTTCCAATCTATGACTTTAAGACTCATCAACGTAGATCTGATACTTTCCGCCAG 590 ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct 540 TATCAAGTTCCAATCTACGACTTTAAGACCCATCAACGTAGATCTGATACTTTCCGCCAG 599 Query 591 GTCAATGCTTCTGATGTAATAATATTGGAAGGGATTCTAGTTTTCCATGACTCACGAGTT 650 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 600 GTCAATGCTTCTGATGTTATAATATTGGAAGGGATTCTAGTTTTCCATGACTCACGAGTT 659 Query 651 CGGAATCTGATGAATATGAAGATCTTTGTTGATACAGATGCTGATGTAAGGCTTGCTCGC 710 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 660 CGGAATCTGATGAATATGAAGGTCTTTGTTGATACAGATGCTGATGTAAGGCTTGCTCGC 719 Query 711 AGAATTAGGCGTGACACAGTTGAGAGGGGTAGGGATGTCAATTCTGTGCTTGAACAGTAT 770 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 720 AGAATCAGGCGTGACACAGTTGAGAGGGGTAGGGATGTCAATTCTGTGCTTGAACAGTAT 779 Query 771 GCAAAGTTTGTGAAGCCGGCATTTGATGACTTCGTGCTCCCTTCAAAGAAATATGCTGAC 830 |||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||| Sbjct 780 GCAAAGTTTGTGAAGCCGGCATTTGATGACTTTGTGCTCCCCTCGAAGAAATATGCTGAC 839 Query 831 GTGATCATTCCTCGAGGAGGTGATAATCACGTTGCAGTCGATTTGATTACGCAACATATC 890 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 840 GTGATCATTCCTCGAGGAGGTGATAATCACGTTGCAGTCGATTTGATTACACAACATATC 899 Query 891 CACACAAAACTTGGGCAGCATGATCTCTGCAAAATCTACCCAAATGTTTATGTTATCCAG 950 |||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| Sbjct 900 CACACAAAACTTGGGCAGCATGATCTGTGCAAAATCTACCCAAATGTTTACGTCATCCAA 959 Query 951 TCAACATTTCAGATAAGAGGCATGCATACACTTATTCGGGAAAAGGACATATCAAAGCAT 1010 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 960 TCAACATTTCAGATAAGAGGCATGCATACACTTATTCGGGAGAAGGACATATCAAAGCAT 1019 Query 1011 GACTTTGTGTTTTATTCAGATAGACTCATTCGTCTGGTCGTGGAGCATGGTCTTGGTCAT 1070 || |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| Sbjct 1020 GATTTTGTGTTTTATTCAGATCGACTCATTCGTCTGGTTGTGGAGCATGGTCTTGGTCAT 1079 Query 1071 TTGCCATTCACTGAGAAACAAGTAGTTACTCCAACAGGAGCTGTATATACCGGTGTTGAT 1130 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1080 TTGCCATTCACTGAGAAACAAGTAGTTACTCCAACAGGCGCTGTATATACCGGTGTTGAT 1139 Query 1131 TTCTGCAAGAAACTTTGTGGGGTCTCAATTATTAGAAGTGGTGAAAGCATGGAAAATGCA 1190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1140 TTCTGCAAGAAACTTTGTGGGGTCTCAATTATTAGAAGTGGTGAAAGCATGGAAAATGCA 1199 Query 1191 TTACGCGCTTGCTGCAAAGGAATTAAAATAGGGAAGATTCTCATCCACCGTGATGGCGAT 1250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1200 TTACGCGCTTGCTGCAAAGGAATTAAAATAGGGAAGATTCTCATCCACCGTGATGGCGAC 1259 Query 1251 AATGGAAAACAGCTTATTTATGAGAAGCTTCCTCACGACATATCTGAACGCCATGTCCTG 1310 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1260 AATGGAAAACAGCTTATTTATGAGAAGCTTCCTCACGACATCTCTGAACGCCATGTCCTG 1319 Query 1311 CTTCTAGATCCTGTCTTAGCCACAGGTAACTCGGCTAATCAAGCCATTGAACTACTCATA 1370 |||||||||||||||||||||||||||||||| || ||||||||||||||| |||| ||| Sbjct 1320 CTTCTAGATCCTGTCTTAGCCACAGGTAACTCTGCAAATCAAGCCATTGAATTACTTATA 1379 Query 1371 CAGAAAGGTGTTCCTGAAGCTCACATTATATTCCTCAACCTTATATCGGCGCCGGAGGGA 1430 |||||||| ||||||||| ||||||||||||||||||||||||| ||||| ||||||||| Sbjct 1380 CAGAAAGGAGTTCCTGAATCTCACATTATATTCCTCAACCTTATCTCGGCACCGGAGGGA 1439 Query 1431 ATCCACTGTGTCTGCAAACGTTTTCCAGCATTGAAAATTGTGACGTCTGAAATAGACCAA 1490 ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct 1440 ATCCACTGTGTCTGCAAACGTTTTCCAGCATTGAAGATAGTGACGTCTGAAATAGACCAG 1499 Query 1491 TGTCTGAACCAAGAATTCAGAGTTATACCGGGCTTAGGCGAGTTTGGCGATCGTTACTTC 1550 ||||| |||||||| ||| |||||||||||||||||||||||||||| |||||||||||| Sbjct 1500 TGTCTAAACCAAGAGTTCCGAGTTATACCGGGCTTAGGCGAGTTTGGTGATCGTTACTTC 1559 Query 1551 GGCACCGACGAGGAAGACCAGTAGCCACCACTCAACACTGTGACTGGTTTC-A--AAG-G 1606 |||||||||||||||||||||||||||||||||||||||||||| |||||| | || | Sbjct 1560 GGCACCGACGAGGAAGACCAGTAGCCACCACTCAACACTGTGACCGGTTTCGAGCAAATG 1619 Query 1607 AAA-AGCCTAAATT-TATGACTAGAGCGACAGTAGAGGCACTTGCATGTCTTTGTAGTTT 1664 ||| |||||||||| |||||||||||||||| ||||||||| || ||||||||||| Sbjct 1620 AAACAGCCTAAATTCTATGACTAGAGCGACACTAGAGGCACGTGTATGTCTTTGTA---- 1675 Query 1665 GTGCTAAAGAATCTTTATCTTATTG-TTTATGAAGCTCCTCTTGCTTACTTGAATTATTT 1723 |||||||| | || |||||| | |||||||||||| ||||||||||| |||||| || Sbjct 1676 ---CTAAAGAACCATTCTCTTAT-GATTTATGAAGCTCTTCTTGCTTACTCGAATTACTT 1731 Query 1724 TTGAAAAACT-ACGTTAATTTTCTCATTaaaaa-aaTGA--TCGGGACAATGCTAGTTTT 1779 ||||||| || | ||||||||||| ||||| | || || | |||| | |||||||||| Sbjct 1732 TTGAAAA-CTTAAGTTAATTTTCTGATTAAGGATAA-GAAATAGGGA-A-TGCTAGTTTT 1787 Query 1780 CTAAACCGGTGGA-AAAAGACATAACCAATCCTTTTATACATGATTTTG-ACAATCGTA 1836 ||||||||| ||| ||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 1788 CTAAACCGGCGGAGAAAAGACATAACCAATCCTTTTATACATGATTTTGGA-AATCGTA 1845 > Ahg936446 jgi|Araly1|936446|scaffold_500637.1 Length=1493 Score = 1530 bits (828), Expect = 0.0 Identities = 1265/1474 (86%), Gaps = 38/1474 (3%) Strand=Plus/Plus Query 108 AATCCAATGCCGGAAGATTCTTCTTC-TTTAGACTACG-CGATGGAGAAGGCATCAGGGC 165 ||| ||||||||||||||||| | | || ||||| | | |||||||||||||| |||| Sbjct 16 AATTCAATGCCGGAAGATTCTAATGCGATT-GACTATGTC-ATGGAGAAGGCATCGGGGC 73 Query 166 CTCACTTCTCCGGTCTTCG-CTTCGACGGCCTTCTCTCTTCTTCTCCACCCAATTCCTCC 224 ||||||||||||||||||| ||| ||||| | | |||| |||||||| | || |||||| Sbjct 74 CTCACTTCTCCGGTCTTCGCCTT-GACGGTC-T-TCTC-TCTTCTCCGTCGAAATCCTCC 129 Query 225 G--TCGTCT-C-T-TCA-CTCCG-ATCAGCTGTTTCTTCTTCTTCTCCGTCT-TCTTCCG 276 | || ||| | | ||| |||| | || | ||| |||| || |||| || || || Sbjct 130 GTCTCTTCTCCTTCTCATTTCCGTTTAAG-TAATTCATCTT-TT-TCCG-CTATC-GACG 184 Query 277 ATCCCGAAGCGCCTAAGCAGCCCTTCATTATCGGGGTTTCTGGTGGTACGGCTTCTGGTA 336 |||||| || ||| | ||||||||| ||||||| ||| |||||||||| |||||||||| Sbjct 185 ATCCCGCCGCTCCTCATCAGCCCTTCGTTATCGGAGTTACTGGTGGTACTGCTTCTGGTA 244 Query 337 AGACCACGGTCTGTGACATGATAATCCAGCAACTTCATGACCATCGTGTCGTTTTAGTTA 396 |||||||||| ||||||||||| || |||||||||||||| ||||| | ||| |||||| Sbjct 245 AGACCACGGTGTGTGACATGATTATTCAGCAACTTCATGATCATCGCATTGTTCTAGTTA 304 Query 397 ATCAGGATTCCTTTTATCGTGGTTTGACATCTGAGGAGTTGCAGCGTGTGCAAGAGTATA 456 | |||||||||||||| |||||| |||||||||| || ||| ||| ||| ||||| |||| Sbjct 305 ACCAGGATTCCTTTTACCGTGGTCTGACATCTGAAGAATTGGAGCATGTACAAGAATATA 364 Query 457 ACTTTGATCATCCTGATGCGTTTGACACTGAGCAGCTTTTGCATTGTGCTGAGACTCTCA 516 | ||||||||||||||||| |||||||||||||||||||||||||| | ||| || |||| Sbjct 365 ATTTTGATCATCCTGATGCCTTTGACACTGAGCAGCTTTTGCATTGCGTTGACACACTCA 424 Query 517 AGAGCGGGCAACCCTATCAAGTTCCAATCTATGACTTTAAGACTCATCAACGTAGATCT- 575 |||| |||||||| |||||| ||||||| || ||||| || || |||||||||| || | Sbjct 425 AGAGTGGGCAACCTTATCAAATTCCAATTTACGACTTCAAAACCCATCAACGTAAAT-TA 483 Query 576 GATACTTTCCGCCAGGTCAATGCTTCTGATGTAATAATATTGGAAGGGATTCTAGTTTTC 635 ||| |||| || ||||||||||||| |||||| ||||| ||||||||||||||||||||| Sbjct 484 GATGCTTTTCGTCAGGTCAATGCTTGTGATGTCATAATTTTGGAAGGGATTCTAGTTTTC 543 Query 636 CATGACTCACGAGTTC-GGAATCTGATGAATATGAAGATCTTTGTTGATACAGATGCTGA 694 |||||||| ||||||| ||| | ||||||||||||||||||| ||||| ||||||||||| Sbjct 544 CATGACTCGCGAGTTCGGGACT-TGATGAATATGAAGATCTTCGTTGACACAGATGCTGA 602 Query 695 TGTAAGGCTTGCTCGCAGAATTAGGCGTGACACAGTTGAGAGGGGTAGGGATGTCAATTC 754 ||| ||||||||||||||||| ||||||||||| ||||||||||| |||||||| |||| Sbjct 603 TGTGAGGCTTGCTCGCAGAATCAGGCGTGACACGGTTGAGAGGGGCAGGGATGTTGATTC 662 Query 755 TGTGCTTGAACAGTATGCAAAGTTTGTGAAGCCGGCATTTGATGACTTCGTGCTCCCTTC 814 ||||||||||||||||||||||||||||||||| || |||||||| || |||||||| || Sbjct 663 TGTGCTTGAACAGTATGCAAAGTTTGTGAAGCCCGCGTTTGATGATTTTGTGCTCCCCTC 722 Query 815 AAAGAAATATGCTGACGTGATCATTCCTCGAGGAGGTGATAATCACGTTGCAGTCGATTT 874 |||||||||||||| ||||||||||| ||||||||||| ||||| |||||||| ||||| Sbjct 723 TAAGAAATATGCTGATGTGATCATTCCCCGAGGAGGTGACAATCATGTTGCAGTTGATTT 782 Query 875 GATTACGCAACATATCCACACAAAACTTGGGCAGCATGATCTCTGCAAAATCTACCCAAA 934 |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 783 GATTGTGCAACATATCCACACAAAACTTGGGCAACATGATCTCTGCAAAATCTACCCAAA 842 Query 935 TGTTTATGTTATCCAGTCAACATTTCAGATAAGAGGCATGCATACACTTATTCGGGAAAA 994 |||| |||||| | |||||||||||||| ||||||||||||||||||||||| || || Sbjct 843 CGTTTTTGTTATTGAATCAACATTTCAGATTAGAGGCATGCATACACTTATTCGAGAGAA 902 Query 995 GGACATATCAAAGCATGACTTTGTGTTTTATTCAGATAGACTCATTCGTCTGGTCGTGGA 1054 |||||||||||| ||||||||||||||||| |||||| | ||||||||| |||| || || Sbjct 903 GGACATATCAAAACATGACTTTGTGTTTTACTCAGATCGCCTCATTCGTTTGGTTGTAGA 962 Query 1055 GCATGGTCTTGGTCATTTGCCATTCACTGAGAAACAAGTAGTTACTCCAACAGGAGCTGT 1114 ||| |||||||| |||||||| ||||||||||||||||||||||| ||||||||| |||| Sbjct 963 GCACGGTCTTGGCCATTTGCCTTTCACTGAGAAACAAGTAGTTACCCCAACAGGATCTGT 1022 Query 1115 ATATACCGGTGTTGATTTCTGCAAGAAACTTTGTGGGGTCTCAATTATTAGAAGTGGTGA 1174 |||| |||||||||||||||||||||||||||||| |||||| | ||| |||||||||| Sbjct 1023 GTATAGCGGTGTTGATTTCTGCAAGAAACTTTGTGGCGTCTCAGTCATTCGAAGTGGTGA 1082 Query 1175 AAGCATGGAAAATGCATTACGCGCTTGCTGCAAAGGAATTAAA-ATAGGGAAGATTCTCA 1233 |||||||||||| ||||||||||| || |||||||| || ||| |||||||||||||||| Sbjct 1083 AAGCATGGAAAACGCATTACGCGCGTGTTGCAAAGGGAT-AAAGATAGGGAAGATTCTCA 1141 Query 1234 TCCACCGTGATGGCGATAATGGAAAACAGCTTATTTATGAGAAGCTTCCTCACGACATAT 1293 |||| ||||||||||| ||||||| |||||||| || ||||||||||| | | |||| Sbjct 1142 TCCATCGTGATGGCGACAATGGAATGCAGCTTATATACGAGAAGCTTCCA-A-GTGATAT 1199 Query 1294 CT--GAACGCCATGTCCTGCT-TCTAGATCCTGTCTTAGCCACAGGTAACTCGGCTAATC 1350 || || |||||||||||||| | |||||||||| |||| |||||||||||| || || | Sbjct 1200 CTCCGAGCGCCATGTCCTGCTAT-TAGATCCTGTTTTAGGCACAGGTAACTCTGCAAACC 1258 Query 1351 AAGCCATTGAACTACTCATACAGAAAGGTGTTCCTGAAGCTCACATTATATTCCTCAACC 1410 | || || |||||||||||||||||||| || |||||||| |||||||||||| | || | Sbjct 1259 AGGCGATAGAACTACTCATACAGAAAGGAGTACCTGAAGCCCACATTATATTCTTAAATC 1318 Query 1411 TTATATCGGCGCCGGAGGGAATCCACTGTGTCTGCAAACGTTTTCCAGCA-TTGAAAATT 1469 | || || ||||| || |||||||| || ||||||||||| |||||| | ||||| ||| Sbjct 1319 TCATCTCAGCGCCCGAAGGAATCCATTGCGTCTGCAAACGGTTTCCAA-AGTTGAAGATT 1377 Query 1470 GTGACGTCTGAAATAGACCAATGTCTGAACCAAGAATT-CAGAGTTATACCGGGCTTAGG 1528 ||||| || ||||| || || ||||||||| |||| || | |||||||||| ||||| || Sbjct 1378 GTGACTTCAGAAATCGATCAGTGTCTGAACGAAGAGTTTC-GAGTTATACCAGGCTTGGG 1436 Query 1529 CGAGTTTGGCGATCGTTACTTCGGCACCGACGAG 1562 |||||||| ||||| ||||| || || |||||| Sbjct 1437 TGAGTTTGGTGATCGCTACTTTGGTACTGACGAG 1470 > Ahg896655 jgi|Araly1|896655|Al_scaffold_0005_621 Length=1395 Score = 340 bits (184), Expect = 2e-92 Identities = 504/655 (77%), Gaps = 36/655 (5%) Strand=Plus/Plus Query 602 TGATGTAATAATATTGGAAGGG-ATTCTAGTT-TTCCATGACT-CACGAGTTCG-GAATC 657 ||||||||| || || | |||| || |||||| || ||||| | | |||||||| | ||| Sbjct 387 TGATGTAATCATCTTAG-AGGGAATCCTAGTTCTT-CATGA-TCCTCGAGTTCGTG-ATC 442 Query 658 TGATGAATATGAAGATCTTTGTTGATACAGATGCTGATGTAAGGCTTGCTCGCAGAATT- 716 | ||||| ||||||||||||||||||||||||||||||||| ||||| | | ||||| Sbjct 443 TCATGAACATGAAGATCTTTGTTGATACAGATGCTGATGTACGGCTTTCGAGAAGAATAC 502 Query 717 AGGCGTGACACAGTTGAGAGGGGTAGGGATGTC-AATTCTGTGCTTGAACAGTATGCAAA 775 | ||||| || || ||||| || || | || || |||||||||||||||| |||| Sbjct 503 AA-CGTGATACCGTCGAGAGAGGAAGAAACATCCAAAA-TGTGCTTGAACAGTATACAAA 560 Query 776 GTTTGTGAAGCCG-GCATTTGATGACTTCGTGCTCCCTTCAAAGAAATATGCTGACGTGA 834 |||||||||||| | |||||||| ||| | | || || | ||| || |||||| | | Sbjct 561 GTTTGTGAAGCCTAGT-TTTGATGAATTCATCCAGCCATCGATGAAGTACGCTGACATAA 619 Query 835 TCATTCCTCGAGGAGGTGATAATCACGTTGCAGTCGAT-TTGATTACGCAACATATCCAC 893 |||||||||||||||| || ||| | |||||| | || || ||| |||||||||| Sbjct 620 TCATTCCTCGAGGAGGAGACAATGATGTTGCAATTGACCTT-ATTGTTCAACATATCCGT 678 Query 894 ACAAAACTTGGGC-AGCATGATCTCTGCAAAATCTACCCAAATGT-TT-ATGTTATCCAG 950 ||||| || | || | || ||||||| || || ||| |||| | || || |||| Sbjct 679 ACAAAGCT-GTGCCAACACAATCTCTGTAAGATATACTCAAACATCTTCATCATATCT-- 735 Query 951 TCAACATTTCAGAT-AAGAGGCATGCATACACTTATTCGGGAAAAGGACATATCAAAGCA 1009 |||||||| ||||| || ||| |||||||| ||||| || || | ||| | ||||||| Sbjct 736 TCAACATTCCAGATCAA-AGGAATGCATACTCTTATCCGCGACATCAACACAACAAAGCA 794 Query 1010 TGACTTT-GTGTTTTATTCAGATAGACTCATTCGTCTGGTCGTGGAGCATGGTCTTGGTC 1068 ||| ||| || ||||| | || || | ||||| ||||||||||| ||||| ||||||| Sbjct 795 TGA-TTTCGTCTTTTACGCTGACCGATTGATTCGACTGGTCGTGGAACATGGACTTGGTC 853 Query 1069 AT-TTGCCATTCACTGAGAAACA-AGT-AGTTACTCCAACAGGAG-CTGTATATACCGGT 1124 || || || ||||| |||||||| | | | ||||||||||| | | || || || || Sbjct 854 ATCTT-CCTTTCACAGAGAAACAGA-TCACC-ACTCCAACAGG-GTCAGTGTACACTGGA 909 Query 1125 GTTGATTTCTGCAAGAAACTT-TGTGGGGTCTCAATTATTAGAAGTGGTGAAAGCATGGA 1183 || || |||||||||| | || ||||| |||||| | || |||||||| ||||||||||| Sbjct 910 GTCGACTTCTGCAAGAGA-TTGTGTGGCGTCTCAGTGATCAGAAGTGGAGAAAGCATGGA 968 Query 1184 AAATGCATTACGCGCTTGCTGCAAAGGAATTAAAATAGGGAAGATTCTCATCCAC 1238 |||||| || | ||||||||||| |||||||| || || || |||||||| ||| Sbjct 969 GAATGCACTAAGAGCTTGCTGCAATGGAATTAAGATTGGTAAAATTCTCATTCAC 1023 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 69171884920 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5