BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G41820.1
Length=2064
Score E
Sequences producing significant alignments: (Bits) Value
Ahg928634 jgi|Araly1|928634|scaffold_301091.1 1958 0.0
Ahg928632 jgi|Araly1|928632|scaffold_301089.1 1908 0.0
Ahg493802 jgi|Araly1|493802|fgenesh2_kg.7__3235__AT5G41820.1 1652 0.0
Ahg492396 jgi|Araly1|492396|fgenesh2_kg.7__1829__AT4G24490.2 1026 0.0
> Ahg928634 jgi|Araly1|928634|scaffold_301091.1
Length=2081
Score = 1958 bits (1060), Expect = 0.0
Identities = 1480/1668 (89%), Gaps = 87/1668 (5%)
Strand=Plus/Plus
Query 447 CAGGAACTTTCACGCTTGGAACTATCGCAGGTTTGT-TGTGGAGCTAACCAAGACGTCAG 505
|||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||
Sbjct 428 CAGGAACTTTCACGCTTGGAACTATCGCAGGTTTGTCT-TGGAGCTAACCAAGACGCCAC 486
Query 506 AAGAGGATGAGTTGCAGTATACAACTGATATGATCAGTGATATTAGTTTCACCATCTATT 565
|| ||||||||||||| ||||||||||||||||||| |||| ||||||||| || |||||
Sbjct 487 AACAGGATGAGTTGCACTATACAACTGATATGATCAATGATGTTAGTTTCAGCAACTATT 546
Query 566 CTGCGTGGCATTATCGTAGTGTACTTGTTTCAAGTTTAGTGGCAAAAAAGGCTGATGGGT 625
|||||||||| ||||||||| |||| ||||||||||||| |||||||||||||||||||
Sbjct 547 CTGCGTGGCACAATCGTAGTGAACTTCTTTCAAGTTTAGTCGCAAAAAAGGCTGATGGGT 606
Query 626 TTATGCCAAAGGAAACGATTCGTCGTGAATTGGATTATGTACATAGTGCTATTTTTACGT 685
||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 607 TTATGCCAAAGGAAACGATTCGTCGTGAATTAGATTATGTACATAATGCTATTTTTACG- 665
Query 686 TA-GAAGA-GAAACAAAGTGGC-TGGTTTTATTACCTTTGGCTTCTTGATCAGACTGTTA 742
| ||||| | | |||||| || ||||||||||| ||||||||||||||||| |||||||
Sbjct 666 GACGAAGATG-ACCAAAGT-GCTTGGTTTTATTATCTTTGGCTTCTTGATCAAACTGTTA 723
Query 743 AAATGGAGATTCCTCTTCGCTTTTCCTCGTGGCCTTCAGATGGTTCCATTATCATTCTAT 802
||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct 724 AAATGGAGACTCCTCTTCGCACTTCCTCGTGGCCTTCAGATGGTTCCATTATCATCCTAT 783
Query 803 CTGGACCTGACTGCTTCAATGCCTCTTCTTCTACTACTAAGTTGACTACTTTCTGTTCCG 862
||||||||| |||||||||| |||||||||| || ||||||| ||||||||||||||||
Sbjct 784 CTGGACCTGGGTGCTTCAATGGCTCTTCTTCTTCTTCTAAGTTCACTACTTTCTGTTCCG 843
Query 863 AGTCTGGTTCTTTTCCACTGATTCTTTACTTTGACCAAGCCGTAAGTGGAGTAAGCTCGT 922
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 844 AGTCTGGTTCTTTTCCACTGATTCTTTACTTTGACCAAGCCGTCAGTGGAGTAAGCTCGT 903
Query 923 CAACTGTTACTATTGGA-TCTGAACT-C-----AA--A-GACCTTGTTTGGGAACCAGTT 972
| |||||||||||| || |||||||| | || | |||||||||||||||||||||
Sbjct 904 CTACTGTTACTATT-GATTCTGAACTACAAGGAAATCAGGACCTTGTTTGGGAACCAGTT 962
Query 973 TCGGATAAGAAAAACTCTCAAGTGGACTCTTGTGTTTGGGTTGCTCGTCTGAAATTTGAC 1032
|||||| |||||||||||| | | |||||||| ||||||||||||||||||||||||
Sbjct 963 TCGGAT---AAAAACTCTCAACT-G--TCTTGTGTATGGGTTGCTCGTCTGAAATTTGAC 1016
Query 1033 TGTAG-AGAACCTTGCTTTAGTCGTAAGGAAACCAAAGTCAAGGTCAGCCTT--G--G-- 1085
|| | ||||||||| || ||| ||||||| |||||| |||||||||||| | |
Sbjct 1017 AGT-GCTGAACCTTGC-TT--TCGCAAGGAAAACAAAGTGAAGGTCAGCCTTGGGAAGTC 1072
Query 1086 ---AGGAATTGTTTCTTCCATGGGATGTAACTTGACCGCTCCTTATGAGTTTGTATTTAC 1142
||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||
Sbjct 1073 TCAAGGAATTGTTTCTTCCAGGGGATGTTACTTGAGCGCTCCTTATGAGTTTGTATTTAC 1132
Query 1143 ACTGCGTATTCATGACACTGTCGAAGTAGAGTTGTCACAACAAGAAAGCATTGTTTCATG 1202
| ||| ||||||||||||||||| | ||| | | | ||||||| ||||||||| ||
Sbjct 1133 AGTGCATATTCATGACACTGTCG--G-AGA---G-C-C-ACAAGAAGGCATTGTTTTGTG 1183
Query 1203 GACGGATGGTTTTGACAATTGGGATGATAATGCACTGTCGAATGATTTGAATTCTC-T-T 1260
|||||||||||||||||||| || | |||||| |||||| ||||||||||||| | |
Sbjct 1184 GACGGATGGTTTTGACAATT-GG--G---ATGCACAGTCGAAGGATTTGAATTCTCTTAT 1237
Query 1261 -A-C-C-G--C-CTTAAACGCTGATACGGGTTTTGAGTGGCGTAAGAAAGCTATAAAGAT 1313
| | | | | |||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct 1238 CACCTCGGATCAGTTAAACGCTGATACAGGTTTTGAGTGGCGTAAGCAAGCTATAAAGAT 1297
Query 1314 AGAGATTGAACT-TTTTCGT-ACTTTGCCTGACAGCAAAATTGGAAAGCTCATTCTTGCA 1371
|||||||||| | ||||||| | ||||| |||||||||| ||||||||||||||||||||
Sbjct 1298 AGAGATTGAA-TGTTTTCGTGA-TTTGCATGACAGCAAATTTGGAAAGCTCATTCTTGCA 1355
Query 1372 AGGCTTTTGATGGCTGAGGAAACTATGATCTC-----A-------AATGGTGTCCATTAT 1419
|||||||||||||||||||||||||||||||| | || ||||||||||||
Sbjct 1356 AGGCTTTTGATGGCTGAGGAAACTATGATCTCGGATGATGCTGTTAAGGGTGTCCATTAT 1415
Query 1420 AAAGAAATCCTCCAACTGTATAACGATCTAATGGCTCTTGATTCTTGGCATAACCAGTAC 1479
|| ||||||||||| |||||||| ||||| ||||||||| |||||| |||| ||||||||
Sbjct 1416 AATGAAATCCTCCAGCTGTATAAGGATCTGATGGCTCTTAATTCTTCGCATGACCAGTAC 1475
Query 1480 TACAAGGATGAGCACAGCGTAGCTCTAATCCACAAGGTGACTTCAAGAACTGAATCCATG 1539
|||||||||||||||||||||||||| ||||||||||||||||||| || |||||| ||
Sbjct 1476 TACAAGGATGAGCACAGCGTAGCTCTTCTCCACAAGGTGACTTCAAGTACCGAATCCCTG 1535
Query 1540 TCCAGACACCTCTTTCGGTACAGGAATATGAACAATATTATATGTTTAAGGCTCAATAAC 1599
||||||| |||||||| |||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 1536 TCCAGACGCCTCTTTCTGTACAGGAATATGAACAATATTGTATGTCTAAGGCTCAATAAC 1595
Query 1600 TTAACACTATCTCGGATAGCCGCGGTCGAGAAGTTGCTATTTGTCCAAATGTTAGATCTC 1659
|||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 1596 TTAACATTATCTCGGATAGCCGCTGTCGAGAAGTTTCTATTTGTCCAAATGTTAGATCTC 1655
Query 1660 AGTCACAATGAGCTTCATTCAGCTGAAGGATTGGAGGCGATGCAGCTTCTCTGTTGCCTA 1719
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1656 AGTCACAATGAGCTTCATTCCGCTGAAGGATTGGAGGCGATGCAGCTTCTCTGTTGCCTA 1715
Query 1720 AATCTGAGTCACAACAGAATCAGGAGCTTTTCAGCGCTTGACTCTTTAAGACATCTTAAG 1779
|||||| |||||||||||||||||||||||||||| ||||| ||| |||||||||| |||
Sbjct 1716 AATCTGTGTCACAACAGAATCAGGAGCTTTTCAGCCCTTGATTCTCTAAGACATCTGAAG 1775
Query 1780 CAGCTTAGAGTGTTGGATGTTTCACATAACCACATCTGTGGGGAA-CTCCCAGTAGACAC 1838
|||||||||||||||||||||||||||||| |||| | || || | |||||| |||||
Sbjct 1776 CAGCTTAGAGTGTTGGATGTTTCACATAACGACATGGGCGGC-AAGCACCCAGTGGACAC 1834
Query 1839 AACAAGGTACCTTTGTTCTTCGCCGCTCTCTAATTCGGGTGAAACTGGAAGAGAGGTGCC 1898
|||||||||||| ||||||| ||||||||||||||||| ||||| ||||||| |||||||
Sbjct 1835 AACAAGGTACCTCTGTTCTTGGCCGCTCTCTAATTCGGCTGAAATTGGAAGACAGGTGCC 1894
Query 1899 TAATAAATACCAGGATGCGTATTTGGTGCTTAGAGATTTGATGAAACTGAAGCAGTTAGA 1958
| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1895 TTGTAAATACTGGGATGCGTATTTGGTGCTTAGAGATTTGAAGAAACTGAAGCAGTTAGA 1954
Query 1959 TAT--TA-GAGGCAACGACCTAATATTTGCAGGAGAAGAGTTCAGCTCCTTTGTCCGCCA 2015
||| || |||||||||||||||| | ||||| ||||||||||||||||||||||||||
Sbjct 1955 TATAATAAGAGGCAACGACCTAAT-T--GCAGGGGAAGAGTTCAGCTCCTTTGTCCGCCA 2011
Query 2016 GGTTGTGCCAAAGCTTGTATGGCTTGATGGCCACAAACTCACAAGTTA 2063
|||| | ||||||||||||||||||||||||||||||||| | |||||
Sbjct 2012 GGTTCTTCCAAAGCTTGTATGGCTTGATGGCCACAAACTCGCTAGTTA 2059
Score = 364 bits (197), Expect = 1e-99
Identities = 348/416 (84%), Gaps = 29/416 (7%)
Strand=Plus/Plus
Query 1 ATGCACGGTCGTAAGA-GAGAGGAGGATCCGAATCCAGAGGAGAC-C-GCAGCTAAAGCC 57
|||||||||||| || || ||| || | |||| ||||| || | | || ||||||| |
Sbjct 21 ATGCACGGTCGTCCGAGGA-AGGCGGCTTCGAAGCCAGA--AGCCTCGGCTGCTAAAG-C 76
Query 58 CTT-GAGCTCCGGTCTCTCCAGTCCCAGTTCATGTCCAATCACCATCAAAAGATTTACAC 116
||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct 77 CTTAAAGCTCCGGTCGGTCCAGTCCCAGTTCATGTCCAATCACCATCGAAAGATTTACAC 136
Query 117 AAAGGAAGCAATTCAATTAAGCGCGAAGCTTCTAATAACCAATCCAGAGTTCTACACTGC 176
| |||||||||||||||||||||||||||||||| || |||||| ||| |||||| ||
Sbjct 137 ACAGGAAGCAATTCAATTAAGCGCGAAGCTTCTAGCAATCAATCCGGAGGCCTACACGGC 196
Query 177 TTGGAACTATCCGAAGCTCGCCTTCGAG--TC-CCGA-CTCGA--CGAGGACTCTGATCC 230
||||||||||| |||||||||| ||||| | || | ||| ||| |||||||||||
Sbjct 197 TTGGAACTATCGGAAGCTCGCCGTCGAGGATAACCTTTCCCGAATCGACGACTCTGATCC 256
Query 231 AAGCTTGGTCAACTCAATTATCGATGAAGAACTAGGAGTCGTA-CAAAATGCC-TT-GGA 287
||||||||||||||||||| || |||||||||| | ||||||| ||| |||| || ||
Sbjct 257 AAGCTTGGTCAACTCAATTCTCAATGAAGAACTTGAAGTCGTAGCAAT-TGCCCTTCGGC 315
Query 288 GAGGAATGTCAAGTCATATGGGGCTTGGTATCATCGAAAGTGGGTTTTGAGTAAAAAAGG 347
|| ||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct 316 GA--AATCTCAAGTCCTATGGGGCTTGGTATCATCGAAAGTGGGTTTTGAGTAAA---GG 370
Query 348 GCATTATTATCCCTCCTTAGAAAATGAATTGCAACTTTTGAACGACTATCAAAAGC 403
||||| || ||||||||||| ||||||||||||||||| | ||||||||||
Sbjct 371 GCATT-----CC-TCCTTAGAAAAGGAATTGCAACTTTTGAATAAATATCAAAAGC 420
> Ahg928632 jgi|Araly1|928632|scaffold_301089.1
Length=3794
Score = 1908 bits (1033), Expect = 0.0
Identities = 1469/1666 (88%), Gaps = 84/1666 (5%)
Strand=Plus/Plus
Query 447 CAGGAACTTTCACGCTTGGAACTATCGCAGGTTTGTTGTGGAGCTAACCAAGACGTCAGA 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2144 CAGGAACTTTCACGCTTGGAACTATCGCAGGTTTGTTGTGGAGCTAACCAAGACGTCACC 2203
Query 507 AGAGGATGAGTTGCAGTATACAACTGATATGATCAGTGATATTAGTTTCACCATCTATTC 566
| |||||||||||||||||||||||||| | |||| |||| ||||||| | || ||||||
Sbjct 2204 ACAGGATGAGTTGCAGTATACAACTGATTTAATCAATGATGTTAGTTTTAGCAACTATTC 2263
Query 567 TGCGTGGCATTATCGTAGTGTACTTGTTTCAAGTTTAGTGGCAAAAAAGGCTGATGGGTT 626
||||||||| ||||||||| |||| ||||||||||||| ||||||||||||||||||||
Sbjct 2264 TGCGTGGCACAATCGTAGTGCACTTCTTTCAAGTTTAGTCGCAAAAAAGGCTGATGGGTT 2323
Query 627 TATGCCAAAGGAAACGATTCGTCGTGAATTGGATTATGTACATAGTGCTATTTTTACGTT 686
|||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 2324 TATGCCAAAGGAAACGATTCGTCGTGAATTAGATTATGTACATAATGCTATTTTTACG-G 2382
Query 687 A-GAAGA-GAAACAAAGTGGCTGGTTTTATTACCTTTGGCTTCTTGATCAGACTGTTAAA 744
| ||||| | | ||||| | |||||||||||| || |||||||||||||| |||||||||
Sbjct 2383 ACGAAGATG-ACCAAAGCGCCTGGTTTTATTATCTCTGGCTTCTTGATCAAACTGTTAAA 2441
Query 745 ATGGAGATTCCTCTTCGCTTTTCCTCGTGGCCTTCAGATGGTTCCATTATCATTCTATCT 804
||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct 2442 ATGGAGACTCCTCTTCGCACTTCCTCGTGGCCTTCTGATGGTTCCATTATCATTCTATCT 2501
Query 805 GGACCTGACTGCTTCAATGCCTCTTCTTCTACTACTAAGTTGACTACTTTCTGTTCCGAG 864
||||||| |||||||||| |||||||||| | ||||||| ||||||||||||||||||
Sbjct 2502 GGACCTGGGTGCTTCAATGGCTCTTCTTCT--T-CTAAGTTCACTACTTTCTGTTCCGAG 2558
Query 865 TCTGGTTCTTTTCCACTGATTCTTTACTTTGACCAAGCCGTAAGTGGAGTAAGCTCGTCA 924
|||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2559 TCTGCTTCTTTTCCACTGATTCTTTACTTTGACCAAGCCGTCAGTGGAGTAAGCTCGTCT 2618
Query 925 ACTGTTACTATTGGA-TCTGAACT-C-----AA--A-GACCTTGTTTGGGAACCAGTTTC 974
|||||||||||| || |||||||| | || | |||||||||||||||||||||||
Sbjct 2619 ACTGTTACTATT-GATTCTGAACTACAAGGAAATCAGGACCTTGTTTGGGAACCAGTTTC 2677
Query 975 GGATAAGAAAAACTCTCAAGTGGACTCTTGTGTTTGGGTTGCTCGTCTGAAATTTGACTG 1034
|||| |||||||||||| | | |||||||| |||||||||||||||||||||||| |
Sbjct 2678 GGAT---AAAAACTCTCAACT-G--TCTTGTGTATGGGTTGCTCGTCTGAAATTTGACAG 2731
Query 1035 TAGAGAACCTTGCTTTAGTCGTAAGGAAACCAAAGTCAAGGTCAGCCTT--G--G----- 1085
|| ||||||||| || ||| ||||||| |||||| |||||||||||| | |
Sbjct 2732 TACTGAACCTTGC-TT--TCGCAAGGAAAACAAAGTGAAGGTCAGCCTTGGGAAGTCTCA 2788
Query 1086 AGGAATTGTTTCTTCCATGGGATGTAACTTGACCGCTCCTTATGAGTTTGTATTTACACT 1145
||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||| |
Sbjct 2789 AGGAATTGTTTCTTCCAGGGGATGTAACTTGAGCGCTCCTTTTGAGTTTGTATTTACAGT 2848
Query 1146 GCGTATTCATGACACTGTCGAAGTAGAGTTGTCACAACAAGAAAGCATTGTTTCATGGAC 1205
|| ||||||||||||||||| | ||| | | | ||||||| |||||||||| |||||
Sbjct 2849 GCATATTCATGACACTGTCG--G-AGA---G-C-C-ACAAGAAGGCATTGTTTCGTGGAC 2899
Query 1206 GGATGGTTTTGACAATTGGGATGATAATGCACTGTCGAATGATTTGAATTCTC-T-T-A- 1261
||||||||||||||||| || | |||||| |||||| ||||||||||||| | | |
Sbjct 2900 GGATGGTTTTGACAATT-GG--G---ATGCACAGTCGAAGGATTTGAATTCTCTTATCAC 2953
Query 1262 C-CG---C-CTTAAACGCTGATACGGGTTTTGAGTGGCGTAAGAAAGCTATAAAGATAGA 1316
| || | |||||||||||||| |||||||||||||||||| |||||||||||| |||
Sbjct 2954 CTCGTATCAGTTAAACGCTGATACAGGTTTTGAGTGGCGTAAGCAAGCTATAAAGACAGA 3013
Query 1317 GATTGAACT-TTTTCGT-ACTTTGCCTGACAGCAAAATTGGAAAGCTCATTCTTGCAAGG 1374
||||||| | ||||||| | ||||| |||||||||| |||||||||||||||||||||||
Sbjct 3014 GATTGAA-TGTTTTCGTGA-TTTGCATGACAGCAAATTTGGAAAGCTCATTCTTGCAAGG 3071
Query 1375 CTTTTGATGGCTGAGGAAACTATGATCTC-----A-------AATGGTGTCCATTATAAA 1422
||||||||||||||||||||||||||||| | || ||||||||||||
Sbjct 3072 CTTTTGATGGCTGAGGAAACTATGATCTCGGATGATGCTGTTAAGGGTGTCCATTATGTT 3131
Query 1423 GAAATCCTCCAACTGTATAACGATCTAATGGCTCTTGATTCTTGGCATAACCAGTACTAC 1482
||||||||||| |||||||||||||| |||| |||| |||||| |||| |||||||||||
Sbjct 3132 GAAATCCTCCAGCTGTATAACGATCTGATGGTTCTTAATTCTTCGCATTACCAGTACTAC 3191
Query 1483 AAGGATGAGCACAGCGTAGCTCTAATCCACAAGGTGACTTCAAGAACTGAATCCATGTCC 1542
||||||||||||||||||||||| ||||||||||||||||||| || |||||| |||||
Sbjct 3192 AAGGATGAGCACAGCGTAGCTCTTCTCCACAAGGTGACTTCAAGCACCGAATCCCTGTCC 3251
Query 1543 AGACACCTCTTTCGGTACAGGAATATGAACAATATTATATGTTTAAGGCTCAATAACTTA 1602
||||||||||||| |||||||||||||||||||||| ||||| ||||||||| |||||||
Sbjct 3252 AGACACCTCTTTCTGTACAGGAATATGAACAATATTGTATGTCTAAGGCTCAGTAACTTA 3311
Query 1603 ACACTATCTCGGATAGCCGCGGTCGAGAAGTTGCTATTTGTCCAAATGTTAGATCTCAGT 1662
||| |||||||||||||| | ||||||||||| |||||||||||||||||||||||||||
Sbjct 3312 ACATTATCTCGGATAGCCACTGTCGAGAAGTTTCTATTTGTCCAAATGTTAGATCTCAGT 3371
Query 1663 CACAATGAGCTTCATTCAGCTGAAGGATTGGAGGCGATGCAGCTTCTCTGTTGCCTAAAT 1722
||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 3372 TACAATGACCTTCATTCCGCTGAAGGATTGGAGGCGATGCAGCTTCTCTGTTGCCTAAAT 3431
Query 1723 CTGAGTCACAACAGAATCAGGAGCTTTTCAGCGCTTGACTCTTTAAGACATCTTAAGCAG 1782
||| |||||||||||||||||||||||||||| ||||| ||| |||||||||| ||||||
Sbjct 3432 CTGTGTCACAACAGAATCAGGAGCTTTTCAGCCCTTGATTCTCTAAGACATCTGAAGCAG 3491
Query 1783 CTTAGAGTGTTGGATGTTTCACATAACCACATCTGTGGGGAA-CTCCCAGTAGACACAAC 1841
||||||||||||||||||||||||||| |||| | || || | |||||| ||||||||
Sbjct 3492 CTTAGAGTGTTGGATGTTTCACATAACGACATGGGCGGC-AAGCACCCAGTGGACACAAC 3550
Query 1842 AAGGTACCTTTGTTCTTCGCCGCTCTCTAATTCGGGTGAAACTGGAAGAGAGGTGCCTAA 1901
| |||||||||||||| ||||||||||||||||| ||||| ||||||| ||||||||
Sbjct 3551 AGGGTACCTTTGTTCTAGGCCGCTCTCTAATTCGGCTGAAATTGGAAGACAGGTGCCTTG 3610
Query 1902 TAAATACCAGGATGCGTATTTGGTGCTTAGAGATTTGATGAAACTGAAGCAGTTAGATAT 1961
||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 3611 TAAATACTGGGATGCGTATTTGGTGCTTAGAGATTTGAAGAAACTGAAGCAGTTAGATAT 3670
Query 1962 --TA-GAGGCAACGACCTAATATTTGCAGGAGAAGAGTTCAGCTCCTTTGTCCGCCAGGT 2018
|| |||||||||||||||| | ||||| |||||||||||||||||||||||||||||
Sbjct 3671 AATAAGAGGCAACGACCTAAT-T--GCAGGGGAAGAGTTCAGCTCCTTTGTCCGCCAGGT 3727
Query 2019 TGTGCCAAAGCTTGTATGGCTTGATGGCCACAAACTCACAAGTTAA 2064
| | ||||||||||||| ||||||||||||||||||| | ||||||
Sbjct 3728 TCTTCCAAAGCTTGTATTGCTTGATGGCCACAAACTCGCTAGTTAA 3773
Score = 303 bits (164), Expect = 2e-81
Identities = 262/308 (85%), Gaps = 12/308 (4%)
Strand=Plus/Plus
Query 44 CCGCAGCTAAAGCCCTTGAGCTCCGGTCTCTCCAGTCCCAGTTCATGTCCAATCACCATC 103
|||| |||||||| || |||||||||| |||| ||||||||||||||||| |||||||
Sbjct 1822 CCGCTGCTAAAGCGTTTAAGCTCCGGTCGATCCAATCCCAGTTCATGTCCAACCACCATC 1881
Query 104 AAAAGATTTACACAAAGGAAGCAATTCAATTAAGCGCGAAGCTTCTAATAACCAATCCAG 163
||||||||||||| |||||||||||||||||||||||||||||||| || |||||| |
Sbjct 1882 GAAAGATTTACACACAGGAAGCAATTCAATTAAGCGCGAAGCTTCTAGCAATCAATCCGG 1941
Query 164 AGTTCTACACTGCTTGGAACTATCCGAAGCTCGCCTTCGAG--TC-CCGA-CTCGA--CG 217
|| |||||| ||||||||||||| |||||||||| ||||| | || | ||| ||
Sbjct 1942 AGGCCTACACGGCTTGGAACTATCGGAAGCTCGCCGTCGAGGATAACCTTTCCCGAATCG 2001
Query 218 AGGACTCTGATCCAAGCTTGGTCAACTCAATTATCGATGAAGAACTAGGAGTCGTA-CAA 276
| |||||||||||||||||||||||||||||| || |||||||||| | ||||||| |||
Sbjct 2002 ACGACTCTGATCCAAGCTTGGTCAACTCAATTCTCAATGAAGAACTTGAAGTCGTAGCAA 2061
Query 277 AATGCC-TTGGA-GAGGAATGTCAAGTCATATGGGGCTTGGTATCATCGAAAGTGGGTTT 334
|||| || || || ||| ||||||| ||||||||||||||||||||||||||| |||
Sbjct 2062 T-TGCCCTTCGACGA--AATATCAAGTCCTATGGGGCTTGGTATCATCGAAAGTGGATTT 2118
Query 335 TGAGTAAA 342
||| ||||
Sbjct 2119 TGAATAAA 2126
> Ahg493802 jgi|Araly1|493802|fgenesh2_kg.7__3235__AT5G41820.1
Length=2028
Score = 1652 bits (894), Expect = 0.0
Identities = 1134/1243 (91%), Gaps = 44/1243 (4%)
Strand=Plus/Plus
Query 847 ACTACTTTCTGTTCCGAGTCTGGTTCTTTTCCACTGATTCTTTACTTTGACCAAGCCGTA 906
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 805 ACTACTTTCTGTTCCGAGTCTGGTTCTTTTCCACTGATTCTTTACTTTGACCAAGCCGTC 864
Query 907 AGTGGAGTAAGCTCGTCAACTGTTACTATTGGA-TCTGAACT------CAA--A-GACCT 956
|||||||| |||||||| |||||||||||| || |||||||| ||| | || ||
Sbjct 865 AGTGGAGTTAGCTCGTCTACTGTTACTATT-GATTCTGAACTCAAAGCCAATGAGGATCT 923
Query 957 TGTTTGGGAACCAGTTTCGGATAAGAAAAACTCTCAAGTGGACTCTTGTGTTTGGGTTGC 1016
|||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||
Sbjct 924 TGTTTGGGAACCAGTTTCGGATAATAAGAACTCTCAAGTGGACTCTTGTGTATGGGTTGC 983
Query 1017 TCGTCTGAAATTTGACTGTAGAGAACCTTGCTTTAGTCGTAAGGAAACCAAAGTCAAGGT 1076
|| ||||||||||||| |||||| ||||||||||||||| ||||||| ||||||||||||
Sbjct 984 TCATCTGAAATTTGACAGTAGAGGACCTTGCTTTAGTCGCAAGGAAAACAAAGTCAAGGT 1043
Query 1077 CAGCCTTGGAGGAATTGTTTCTTCCATGGGATGTAACTTGACCGCTCCTTATGAGTTTGT 1136
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct 1044 CAGCCTTGGAGGAATTGTTTCTTCCATGGGATGTAACTTGAGCACTCCTTATGAGTTTGT 1103
Query 1137 ATTTACACTGCGTATTCATG-ACACTGTCGAAGTAGAGTTGTCACAACAAGAAAGCATTG 1195
||||||| ||| | || ||||||| | | ||||| ||||||||||| ||||||
Sbjct 1104 ATTTACA----GTA--C-TGCACACTGTTG--G-AGAGTCGTCACAACAAG---GCATTG 1150
Query 1196 TTTCATGGACGGATGGTTTTGACAATTGGGATGATAATGCACTGTCGAATGATTTGAATT 1255
|||||||||||||||||||| |||||||||||| |||||| |||||| ||||||||||
Sbjct 1151 TTTCATGGACGGATGGTTTTAACAATTGGGATG---ATGCACAGTCGAAGGATTTGAATT 1207
Query 1256 CTCTTACCGCCTTAAACGCTGATACGGGTTTTGAGTGGCGTAAGAAAGCTATAAAGATAG 1315
|| ||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct 1208 CTTTTATCGCCTTAAACGCTGATGCGGGTTTTGAGTGGCGTAAGGAAGCTATAAAGATAG 1267
Query 1316 AGATTGAACTTTTTCGTACTTTGCCTGACAGCAAAATTGGAAAGCTCATTCTTGCAAGGC 1375
||||||| | | |||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct 1268 AGATTGATCATCTTCGTAATTTGCCTGACAGCAAATTTGGAAAGCTCATTCTTGCAAGGC 1327
Query 1376 TTTTGATGGCTGAGGAAACTATGATCTC--A-AATG--G-T----G--TCCATTATAAAG 1423
|||||||||||||||||||||||||||| | ||| | | | ||||||||| ||
Sbjct 1328 TTTTGATGGCTGAGGAAACTATGATCTCGGATGATGCTGTTAAAGGTTTCCATTATACAG 1387
Query 1424 AAATCCTCCAACTGTATAACGATCTAATGGCTCTTGATTCTTGGCATAACCAGTACTACA 1483
|||||||||| || ||||||||||| || || |||||||| |||||| |||||||||||
Sbjct 1388 AAATCCTCCAGCTCTATAACGATCTCATTGCCCTTGATTCCTGGCATGCCCAGTACTACA 1447
Query 1484 AGGATGAGCACAGCGTAGCTCTAATCCACAAGGTGACTTCAAGAACTGAATCCATGTCCA 1543
||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||| ||
Sbjct 1448 AGGATGAGCACAGTGTAGCTCTTCTCCACAAGGTGACTTCAAGCACTGAATCCATGTTCA 1507
Query 1544 GACACCTCTTTCGGTACAGGAATATGAACAATATTATATGT-TTAAGGCTCAATAACTTA 1602
||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||
Sbjct 1508 GACACCTCTTTCGGTACAGGAATATGAACAATATTGTATGTCTT-AGGCTCAATAACTTA 1566
Query 1603 ACACTATCTCGGATAGCCGCGGTCGAGAAGTTGCTATTTGTCCAAATGTTAGATCTCAGT 1662
||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct 1567 ACACTATCTCGGATAGCCGCGGTTGAGAAGTTGCTATTTGTTCAAATGTTAGATCTCAG- 1625
Query 1663 C-ACAATGAGCTTCATTCAGCTGAAGGATTGGAGGCGATGCAGCTTCTCTGTTGCCTAAA 1721
| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1626 CAACAATGAGCTTCATTCAGCTGAAGGATTGGAGGCGATGCAGCTTCTCTGTTGTCTAAA 1685
Query 1722 TCTGAGTCACAACAGAATCAGGAGCTTTTCAGCGCTTGACTCTTTAAGACATCTTAAGCA 1781
||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||
Sbjct 1686 TCTGAGTCACAACAGAATCAGGAGCTTTTCAGCACTTGACTCTCTAAGACATCTGAAGCA 1745
Query 1782 GCTTAGAGTGTTGGATGTTTCACATAACCACATCTGTGGGGAACTCCCAGTAGACACAAC 1841
||||||||||||||||||||||||||||| |||| | ||||| | |||||| ||||||||
Sbjct 1746 GCTTAGAGTGTTGGATGTTTCACATAACCTCATCGGCGGGGAGCACCCAGTGGACACAAC 1805
Query 1842 AAGGTACCTTTGTTCTTCGCCGCTCTCTAATTCGGGTGAAACTGGAAGAGAGGTGCCTAA 1901
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1806 AAGGTACCTTTGTTCTTCGCCGCTCTCTAATTCGGGTGAAATTGGAAGAGAGGTGCCTTG 1865
Query 1902 TAAATACCAGGATGCGTATTTGGTGCTTAGAGATTTGATGAAACTGAAGCAGTTAGATAT 1961
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1866 TAAATACTGGGATGCGTATTTGGTGCTTAGAGATTTGATGAAACTGAAGCAGTTAGATAT 1925
Query 1962 TAGAGGCAACGACCTAATATTTGCAGGAGAAGAGTTCAGCTCCTTTGTCCGCCAGGTTGT 2021
|||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||
Sbjct 1926 TAGAGGCAACGACCTAATATTTTCAGGGGAAGAGTTCAGCTCTTTTGTCCGCCAGGTTGT 1985
Query 2022 GCCAAAGCTTGTATGGCTTGATGGCCACAAACTCACAAGTTAA 2064
|||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1986 GCCAAAGCTTGTATGGCTTGATGGCCACAAACTCACAAATTAA 2028
Score = 965 bits (522), Expect = 0.0
Identities = 733/829 (88%), Gaps = 38/829 (5%)
Strand=Plus/Plus
Query 1 ATGCACGGTCGTAAGA-GAGAGGAGGATCCGAATCCAGAGGAGACCGCAGCTAAAGCCCT 59
|||||||||||| ||| || | |||| | |||| ||||| |||||||| |||||||||||
Sbjct 1 ATGCACGGTCGTGAGAGGA-ACGAGGCTTCGAAGCCAGAAGAGACCGCTGCTAAAGCCCT 59
Query 60 TGAGCTCCGGTCTCTCCAGTCCCAGTTCATGTCCAATCACCATCAAAAGATTTACACAAA 119
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 60 TGAGCTCCGGTCACTCCAGTCCCAGTTCATGTCCAATCACCATCAAAAGATTTACACACA 119
Query 120 GGAAGCAATTCAATTAAGCGCGAAGCTTCTAA-TAACCAATCCAGAGTTCTACACTGCTT 178
||||||||||||||||||||| ||||||||| || | ||||| ||| |||||| ||||
Sbjct 120 GGAAGCAATTCAATTAAGCGCAAAGCTTCTAGGTATC-AATCCGGAGGCCTACACGGCTT 178
Query 179 GGAACTATCCGAAG-CTCGCCTTCGAGTCCCGACTCGACGAGGACTCTGATCCAAGCTTG 237
||||||||| ||| |||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 179 GGAACTATC-GAAAACTCGCCCTCGAGTCCCGAATCGACGAGGACTCTGATCCAAGCTTG 237
Query 238 GTCAACTCAATTATCGATGAAGAACT-AGGAGTCGTACAAAATGCCTTGGAGAGGAATG- 295
||| |||| ||||||||||||||||| || ||||||||||||||||||| || | ||
Sbjct 238 GTCGACTCTATTATCGATGAAGAACTTAG-AGTCGTACAAAATGCCTTGAAGCGAAACCC 296
Query 296 TCAAGTCATATGGGGCTTGGTATCATCGAAAGTGGGTTTTGAGTAAAAAAGGGCATTATT 355
| ||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 297 T-AAGTCCTATGGAGCTTGGTATCATCGAAAGTGGGTTTTGAGTAAAAAAGGACATTATT 355
Query 356 ATCCCTCCTTAGAAAATGAATTGCAACTTTTGAACGACTATCAAAAGCAA-GCC------ 408
|| ||||||||||||| || |||||||||||||| ||||||||||||||| |||
Sbjct 356 ATTCCTCCTTAGAAAAAGAGTTGCAACTTTTGAATGACTATCAAAAGCAATGCCTTGTGA 415
Query 409 ----C-ATCAAAAGCAAGACGATG-AAAA--GCAAGACGATCCCAGCAGGAACTTTCACG 460
| ||||||||||||||||| |||| ||||||| || |||| | ||||||||||
Sbjct 416 ATGACTATCAAAAGCAAGACGATCCAAAAAAGCAAGACAATGCCAG--G-AACTTTCACG 472
Query 461 CTTGGAACTATCGCAGGTTTGTTGTGGAGCTAACCAAGACGTCAGAAGAGGATGAGTTGC 520
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 473 CTTGGAACTATCGCAGGTTTGTTGTGGAGCTAACCGAGACGTCAGAAGAGGATGAGTTGC 532
Query 521 AGTATACAACTGATATGATCAGTGATATTAGTTTCACCATCTATTCTGCGTGGCATTATC 580
||||||||| ||||||||| ||||||| |||||| |||||||||||||||||| ||||
Sbjct 533 AGTATACAA---ATATGATCAATGATATTTGTTTCAGCATCTATTCTGCGTGGCACTATC 589
Query 581 GTAGTGTACTTGTTTCAAGTTTAGTGGCAAAAAAGGCTGATGGGTTTATGCCAAAGGAAA 640
||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 590 GTAGTGTTCTAGTTTCAAGTTTAGTGGCAAAAAATGCTGATGGGTTTATGCCAAAGGAAA 649
Query 641 CGATTCGTCGTGAA-TTGGATTATGTACATAGTGCTATTTTTACGTTA-GAAGA-GAAAC 697
|||||||||||||| ||| |||||||||||| ||||||||||||| | ||| | |
Sbjct 650 CGATTCGTCGTGAACTTG-ATTATGTACATAATGCTATTTTTACGG-ACGAACTTGGC-C 706
Query 698 AAAGTGGCTGGTTTTATTACCTTTGGCTTCTTGATCAGACTGTTAAAATGGAGATTCCTC 757
||||||| ||||||||||||||||||||||||||||| ||| |||||||||||| |||||
Sbjct 707 AAAGTGGATGGTTTTATTACCTTTGGCTTCTTGATCAAACTCTTAAAATGGAGACTCCTC 766
Query 758 TTCGCTTTTCCTCGTGGCCTTCAGATGGTTCCATTATCATT-CTATCTG 805
||||||||||||| ||||| ||||||||||||||||||| | || ||||
Sbjct 767 TTCGCTTTTCCTCATGGCCATCAGATGGTTCCATTATCACTACTTTCTG 815
> Ahg492396 jgi|Araly1|492396|fgenesh2_kg.7__1829__AT4G24490.2
Length=2318
Score = 1026 bits (555), Expect = 0.0
Identities = 1330/1682 (79%), Gaps = 142/1682 (8%)
Strand=Plus/Plus
Query 447 CAGGAACTTTCACGCTTGGAACTATCGCAGGTTTGTTGTGGAGCTAACCAAGACGTCAGA 506
||| || ||||| |||||||||||||||||||||||||| ||||||||||| | ||||||
Sbjct 578 CAGAAATTTTCATGCTTGGAACTATCGCAGGTTTGTTGTAGAGCTAACCAACAGGTCAGA 637
Query 507 AGAGGATGAGTTGCAGTATACA-ACTGATATGATCAGTGATATTAGTTTCACCATCTATT 565
| ||||||||||||| |||||| | ||||||||||| ||| | ||||| || |||||
Sbjct 638 ACAGGATGAGTTGCACTATACAGA-TGATATGATCA---ATAACAATTTCAGCAACTATT 693
Query 566 CTGCGTGGCATTATCGTAGTGTACTTGTTTCAAGTTTAG-TGGCAAAAAAGGCTGATGGG 624
|||| |||||| |||||||||||||| | |||||||| | | ||| |||| |||||||||
Sbjct 694 CTGCATGGCATAATCGTAGTGTACTTCTATCAAGTTT-GCTTGCACAAAATGCTGATGGG 752
Query 625 TTTATGCCAAAGGAAACGATTCGTCG-TGAAT-TGGA-TTATGTACATAGTGCTATTTTT 681
||||||||||| |||| ||||| | | |||| | || | ||||||| |||||||||
Sbjct 753 TTTATGCCAAATGAAAGGATTCCT-GACGAATAT-GACCT-TGTACATTCAGCTATTTTT 809
Query 682 ACGTTA-GAAGA-GAAACAAAGTGGCTGGTTTTATTACCTTTGGCTTCTTGATCAGACTG 739
||| | ||| | | |||||||||||||||||| | ||||||||||||||||| |||
Sbjct 810 ACG-GACCCAGATG-ACCAAAGTGGCTGGTTTTATCATCTTTGGCTTCTTGATCAAACTC 867
Query 740 TTAAAATGGAGATTCCTCTTCGCTTTTCCT-CGTGGCCTTCAGATGGTTCCATTATCATT 798
|||| |||||| |||||||| | || || | |||||||| ||||||| | ||||| |
Sbjct 868 TTAATGTGGAGACTCCTCTTCTCACTT-CTGCATGGCCTTCCCATGGTTCAACTATCAGT 926
Query 799 CTATCTGGACCTGACTGCTTCAATGCCTCTTCTTCTACTACTAAGTTGACTACTTTCTGT 858
||||||||| ||| ||||| |||| | |||||| | ||||||| |||||||| |||
Sbjct 927 CTATCTGGAGCTGGGTGCTTGAATG--GC-TCTTCT--T-CTAAGTTCACTACTTTTTGT 980
Query 859 TCCGAGTCTGGTTCTTTTCCACTGATTCTTTACTTTGACCAAGCCGTAAGTGGAGTAAGC 918
|| ||||| |||||||||||||||||||| |||||||||||||| || |||||||||||
Sbjct 981 TCTGAGTCGGGTTCTTTTCCACTGATTCTCTACTTTGACCAAGCTGTTGGTGGAGTAAGC 1040
Query 919 TCGTCAACTGTTACTATTGGA-TCTGAACT-----CAAA----GACCTTGTTTGGGAACC 968
|| || |||||||| | | || |||||||| ||| ||||| |||||||||||
Sbjct 1041 TCATCTACTGTTACAACT-GATTCTGAACTAAAAGGAAACGGGGACCTGGTTTGGGAACC 1099
Query 969 AGTTTCGGATAAGAAAAACTCTCAAGTGGACTCTTGTGTTTGGGTTGCTCGTCTGAAATT 1028
| |||| | | | ||||| ||||| || | || ||||| |||||| ||| ||||||||
Sbjct 1100 AATTTC-G-T-ATAAAAATTCTCAGGT-G--TCCTGTGTATGGGTTACTCATCTGAAATA 1153
Query 1029 TGACTGTAGAGAACCTTGCTTTAGT-CGTAAG-GAA-ACCAAAGTCAAGGTCAGCCT-TG 1084
|| | || ||| |||||| | | | ||| ||| | || ||| || | || |
Sbjct 1154 TGTCAGTTCAGATCCTTGC--GAATAC-AAAGTGAAGATCAGAGT--TGG-GA-ACTCTC 1206
Query 1085 GAGGAATTGTTTCTTCCATG-GGATGTAACTTGACCGCTCCTTATGAGTTTGTATTTACA 1143
|||||| |||||||||| | ||| |||||| | ||| |||||||||||||| ||||||
Sbjct 1207 CAGGAATCGTTTCTTCCA-GAGGACATAACTTCAGCGCACCTTATGAGTTTGTCTTTACA 1265
Query 1144 -CTGCGTATTCATGACACTGTCGAAGTAGAGTTGTCACAACAAGAAAGCATTGTTTCATG 1202
| | | ||||||| || ||| || ||| | | | |||||| |||||||||||||
Sbjct 1266 GC-CCATGTTCATGATACCGTC-AA--AGA--T-T--C-TCAAGAAGGCATTGTTTCATG 1315
Query 1203 GACGGATGGTTTTGACAATTGGGATGATAATGCACTGTCGAATGATTTGAATTCTC-T-T 1260
||||||||||||||| | |||||||| | | ||| || |||||||| |||| | |
Sbjct 1316 GACGGATGGTTTTGATATTTGGGATG----CG-A-AGTCCAAGGATTTGAACTCTCTTAT 1369
Query 1261 -ACC---G--C-CTTAAACGCTGATACGGGTTTTGAGTGGCGTAAGAAAGCTATAAAGA- 1312
||| | | ||| | ||||| | | |||| | |||||| || ||||||| |||
Sbjct 1370 CACCTTGGATCGGTTAGAGGCTGAGATAGATTTTAAATGGCGTCAGGAAGCTAT--AGAT 1427
Query 1313 T-AGAGATTGAACTTTTTC-GTACT-TTGCCTGACAGCAAAATTGGAAAGCTCATTCTTG 1369
| ||| ||||| | |||| ||| | || |||||||||||||||||||||||| |||||
Sbjct 1428 TCTGAGGTTGAA-TGTTTCGGTA-TACTGTCTGACAGCAAAATTGGAAAGCTCACTCTTG 1485
Query 1370 CAAGGCTTTTGATGG--C-T---G--A-GGAAAC-TATGAT-CT-CAAATGGTGTCCATT 1417
||||||||||||||| | | | | || | | ||||| || || ||||| | |
Sbjct 1486 CAAGGCTTTTGATGGCTCGTGAAGCTATGGTATCGGATGATGCTGTTAAGGGTGTTCGCT 1545
Query 1418 ATAAAGAAATCCTCCAACTGTATAACGATCTAATGGCTCTTGATTCTTGGCATAACCAGT 1477
|| ||||||||||||| |||||||||||| | ||||| || ||||||| ||| ||||||
Sbjct 1546 ATGAAGAAATCCTCCAGCTGTATAACGATTTGATGGCGCTGGATTCTTCACATTACCAGT 1605
Query 1478 ACTACAAGGATGAGCACAGCGTAGCTCTAATCCACAAGGTGACTTCAAGAACTGAATCCA 1537
|||||||||||||||||||||||||| | ||||||||||||||||||| | |||||||
Sbjct 1606 ACTACAAGGATGAGCACAGCGTAGCTTTTCTCCACAAGGTGACTTCAAGCAGTGAATCCT 1665
Query 1538 TGTCCAGACACCTCTTTCGGTACAGGAATATGAACAATATTATATGTTTAAGGCTCAATA 1597
|||| |||||||||||||| || ||| |||||||||| || ||||| || |||| ||||
Sbjct 1666 TGTCAAGACACCTCTTTCGATATAGGGGTATGAACAATCTTGTATGTCTACGGCTAAATA 1725
Query 1598 ACTTAACACTATCTCGGATAGCCGCGGTCGAGAAGTTGCTATTTGTCCAAATGTTAGATC 1657
||||| ||||||||||||||||| | || ||||||||||| ||||||||||||||||| |
Sbjct 1726 ACTTATCACTATCTCGGATAGCCTCTGTTGAGAAGTTGCTGTTTGTCCAAATGTTAGACC 1785
Query 1658 TCAGTCACAATGAGCTTCATTCAGCTGAAGGATTGGAGGCGATGCAGCTTCTCTGTTGCC 1717
| ||||||||||||||||||||| |||||||||| ||||| ||||| ||||||| |||||
Sbjct 1786 TTAGTCACAATGAGCTTCATTCAACTGAAGGATTAGAGGCAATGCAACTTCTCTCTTGCC 1845
Query 1718 TAAATCTGAGTCACAACAGAATCAGGAGCTTTTCAGCGCTTGACTCTTTAAGACATCTTA 1777
||||||||||||||||||||||| |||| ||||||||||| |||||| |||||||| | |
Sbjct 1846 TAAATCTGAGTCACAACAGAATCCGGAGTTTTTCAGCGCTGGACTCTCTAAGACATGTGA 1905
Query 1778 AGCAGCTTAGAGTGTTGGATGTTTCACATAACCACATCTGTGGG-GAACTCCCAGTAGAC 1836
||||||| | |||||||||||||||||| |||||||| || | | |||| ||| |||
Sbjct 1906 AGCAGCTGAAAGTGTTGGATGTTTCACACAACCACAT-TG-GCAAGCACTC--AGTGGAC 1961
Query 1837 ACAACAAGGTACCTTTGTTCTTCGCCGCTCTCTAATTCGG-GTG-A---A--AC--TG-- 1885
|||||| |||||||||||||||| |||||||||||||| | ||| | | | ||
Sbjct 1962 ACAACACGGTACCTTTGTTCTTCACCGCTCTCTAATTCAGAGTGGAGTCAGGATGATGTA 2021
Query 1886 G-AAGA--GA-----GG-T-GCCTAAT-AAATACCAGGATGCGTATTTGGTGCTTAGAGA 1934
| |||| || || | | | | |||||| |||||||||||| || || |||||
Sbjct 2022 GGAAGACAGAATCCTGGGTTGG-TCACCAAATACTGGGATGCGTATTTCGTCCTAAGAGA 2080
Query 1935 TTTGATGAAACTGAAGCAGTTAGATATTAG-AGGCAACGACCTAATATTTGCAGGAGAA- 1992
||||| | ||||| ||||||||||| || ||| || || ||| || |||| |||
Sbjct 2081 TTTGA--AT-CTGAAACAGTTAGATAT-AGCAGGAAATGA---AAT-TT--CAGG-GAAC 2129
Query 1993 GAGTTCAGCTCCTTTGTCCGCCAGGTTGTGCCAAAGCTTGTATGGCTTGATGGCCACAAA 2052
|| |||||||| ||||||| |||| |||||||||||||||||||||| |||||||| |||
Sbjct 2130 GAATTCAGCTCTTTTGTCCTCCAGATTGTGCCAAAGCTTGTATGGCTCGATGGCCAGAAA 2189
Query 2053 CT 2054
||
Sbjct 2190 CT 2191
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 77627919310
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5