BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G42565.1 Length=348 Score E Sequences producing significant alignments: (Bits) Value Ahg948916 jgi|Araly1|948916|scaffold_800803.1 532 5e-151 Ahg948919 jgi|Araly1|948919|scaffold_800806.1 527 2e-149 Ahg948918 jgi|Araly1|948918|scaffold_800805.1 521 1e-147 Ahg948917 jgi|Araly1|948917|scaffold_800804.1 521 1e-147 Ahg948923 jgi|Araly1|948923|scaffold_800810.1 516 5e-146 Ahg948921 jgi|Araly1|948921|scaffold_800808.1 516 5e-146 Ahg497471 jgi|Araly1|497471|fgenesh2_kg.585__1__AT5G42955.1 516 5e-146 Ahg952316 jgi|Araly1|952316|scaffold_58500002.1 505 1e-142 Ahg952224 jgi|Araly1|952224|scaffold_47400001.1 505 1e-142 Ahg494746 jgi|Araly1|494746|fgenesh2_kg.8__562__AT5G42955.1 505 1e-142 Ahg494722 jgi|Araly1|494722|fgenesh2_kg.8__538__AT5G42955.1 505 1e-142 Ahg949066 jgi|Araly1|949066|scaffold_800953.1 499 5e-141 Ahg333428 jgi|Araly1|333428|fgenesh1_pm.C_scaffold_1006000001 472 1e-132 Ahg497449 jgi|Araly1|497449|fgenesh2_kg.474__9__AT5G42955.1 257 3e-68 Ahg948922 jgi|Araly1|948922|scaffold_800809.1 252 1e-66 Ahg497454 jgi|Araly1|497454|fgenesh2_kg.474__14__AT5G42957.1 213 7e-55 Ahg315391 jgi|Araly1|315391|fgenesh1_pm.C_scaffold_2000424 119 2e-26 > Ahg948916 jgi|Araly1|948916|scaffold_800803.1 Length=390 Score = 532 bits (288), Expect = 5e-151 Identities = 330/350 (94%), Gaps = 4/350 (1%) Strand=Plus/Plus Query 1 ATGTCTAAATTTAATTCTCAGATTACTATGTTATTCATTGTTGTAGCTTTGGTGTGTGCG 60 ||||||||||||| ||||||||||||| | ||||||| ||||||||||||||||||||| Sbjct 22 ATGTCTAAATTTAGCTCTCAGATTACTACGCTATTCATCGTTGTAGCTTTGGTGTGTGCG 81 Query 61 TTTGTTCCGGCTTTCTCAGTCGAAGAAGCTGAAGCAAACTTATTATGGAATACTTGTCTT 120 |||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct 82 TTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAATCATTATGGAATACTTGTCTT 141 Query 121 GGTTAAA-TCACTCCTAAGTGTGCGTTGGATATAGTCGCTGCTGTCTTTGAAAATGGAAC 179 |||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct 142 -GTTAAACTCACTCCTAAGTGTGCGTTGGATATAATCGCTGTTGTCTTTGAAAATGGAAC 200 Query 180 CATGC-CTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGAAAAATGTGTCACGATACGC 238 ||| | |||||||||||||||||||||||||||||||||| |||||||||||||| || | Sbjct 201 CAT-CTCTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGGAAAATGTGTCACGAAACAC 259 Query 239 TTATTAAGTATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 298 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 260 TTATTAAATATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 319 Query 299 AGAGTGATGACTTGTGGAAACATTGTGTCTCAATCTCCAAAAGTGCTTGA 348 ||||||||||||||||||| |||||||||||||||||||||||| ||||| Sbjct 320 AGAGTGATGACTTGTGGAATCATTGTGTCTCAATCTCCAAAAGTACTTGA 369 > Ahg948919 jgi|Araly1|948919|scaffold_800806.1 Length=390 Score = 527 bits (285), Expect = 2e-149 Identities = 329/350 (94%), Gaps = 4/350 (1%) Strand=Plus/Plus Query 1 ATGTCTAAATTTAATTCTCAGATTACTATGTTATTCATTGTTGTAGCTTTGGTGTGTGCG 60 ||||||||||||| ||||||||||||| | ||||||| ||||||||||||||||||||| Sbjct 22 ATGTCTAAATTTAGCTCTCAGATTACTACGCTATTCATCGTTGTAGCTTTGGTGTGTGCG 81 Query 61 TTTGTTCCGGCTTTCTCAGTCGAAGAAGCTGAAGCAAACTTATTATGGAATACTTGTCTT 120 |||||||||| ||||||||||||||||||||||||||| | |||||||||||||||| || Sbjct 82 TTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAATCATTATGGAATACTTGTGTT 141 Query 121 GGTT-AAATCACTCCTAAGTGTGCGTTGGATATAGTCGCTGCTGTCTTTGAAAATGGAAC 179 ||| ||||||||||||||||||||||||||||| | |||| |||||||||||||||||| Sbjct 142 -GTTAAAATCACTCCTAAGTGTGCGTTGGATATAATTGCTGTTGTCTTTGAAAATGGAAC 200 Query 180 CATGC-CTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGAAAAATGTGTCACGATACGC 238 ||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct 201 CAT-CTCTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGGAAAATGTGTCACGATACAC 259 Query 239 TTATTAAGTATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 298 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 260 TTATTAAATATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 319 Query 299 AGAGTGATGACTTGTGGAAACATTGTGTCTCAATCTCCAAAAGTGCTTGA 348 ||||||||||||||||||| |||||||||||||||||||||||| ||||| Sbjct 320 AGAGTGATGACTTGTGGAATCATTGTGTCTCAATCTCCAAAAGTACTTGA 369 > Ahg948918 jgi|Araly1|948918|scaffold_800805.1 Length=390 Score = 521 bits (282), Expect = 1e-147 Identities = 328/350 (94%), Gaps = 4/350 (1%) Strand=Plus/Plus Query 1 ATGTCTAAATTTAATTCTCAGATTACTATGTTATTCATTGTTGTAGCTTTGGTGTGTGCG 60 ||||||||||||| ||||||||||||| | ||||||| ||||||||||||||||||||| Sbjct 22 ATGTCTAAATTTAGCTCTCAGATTACTACGCTATTCATCGTTGTAGCTTTGGTGTGTGCG 81 Query 61 TTTGTTCCGGCTTTCTCAGTCGAAGAAGCTGAAGCAAACTTATTATGGAATACTTGTCTT 120 |||||||||| ||||||||||||||||||||||||||| | |||||||||||||||| || Sbjct 82 TTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAATCATTATGGAATACTTGTGTT 141 Query 121 GGTT-AAATCACTCCTAAGTGTGCGTTGGATATAGTCGCTGCTGTCTTTGAAAATGGAAC 179 ||| ||||||||||||||||||||||||||||| | |||| |||||||||||||||||| Sbjct 142 -GTTAAAATCACTCCTAAGTGTGCGTTGGATATAATTGCTGTTGTCTTTGAAAATGGAAC 200 Query 180 CATGC-CTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGAAAAATGTGTCACGATACGC 238 ||| | ||||||||||||||||||||||||| |||||||| ||||||||||||||||| | Sbjct 201 CAT-CTCTGATCCTTGTTGCAACGATCTCGTTAAAGAAGGGAAAATGTGTCACGATACAC 259 Query 239 TTATTAAGTATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 298 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 260 TTATTAAATATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 319 Query 299 AGAGTGATGACTTGTGGAAACATTGTGTCTCAATCTCCAAAAGTGCTTGA 348 ||||||||||||||||||| |||||||||||||||||||||||| ||||| Sbjct 320 AGAGTGATGACTTGTGGAATCATTGTGTCTCAATCTCCAAAAGTACTTGA 369 > Ahg948917 jgi|Araly1|948917|scaffold_800804.1 Length=390 Score = 521 bits (282), Expect = 1e-147 Identities = 328/350 (94%), Gaps = 4/350 (1%) Strand=Plus/Plus Query 1 ATGTCTAAATTTAATTCTCAGATTACTATGTTATTCATTGTTGTAGCTTTGGTGTGTGCG 60 ||||||||||||| ||||||||||||| | ||||||| ||||||||||||||||||||| Sbjct 22 ATGTCTAAATTTAGCTCTCAGATTACTACGCTATTCATCGTTGTAGCTTTGGTGTGTGCG 81 Query 61 TTTGTTCCGGCTTTCTCAGTCGAAGAAGCTGAAGCAAACTTATTATGGAATACTTGTCTT 120 |||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct 82 TTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAATCATTATGGAATACTTGTCTT 141 Query 121 GGTT-AAATCACTCCTAAGTGTGCGTTGGATATAGTCGCTGCTGTCTTTGAAAATGGAAC 179 ||| ||||||| ||||||||||||||||||||| | |||| |||||||||||||||||| Sbjct 142 -GTTAAAATCACACCTAAGTGTGCGTTGGATATAATTGCTGTTGTCTTTGAAAATGGAAC 200 Query 180 CATGC-CTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGAAAAATGTGTCACGATACGC 238 ||| | |||||||||| ||||||||||||||||||||||| ||||||||||||||||| | Sbjct 201 CAT-CTCTGATCCTTGCTGCAACGATCTCGTCAAAGAAGGGAAAATGTGTCACGATACAC 259 Query 239 TTATTAAGTATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 298 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 260 TTATTAAATATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 319 Query 299 AGAGTGATGACTTGTGGAAACATTGTGTCTCAATCTCCAAAAGTGCTTGA 348 ||||||||||||||||||| |||||||||||||||||||||||| ||||| Sbjct 320 AGAGTGATGACTTGTGGAATCATTGTGTCTCAATCTCCAAAAGTACTTGA 369 > Ahg948923 jgi|Araly1|948923|scaffold_800810.1 Length=389 Score = 516 bits (279), Expect = 5e-146 Identities = 327/350 (93%), Gaps = 4/350 (1%) Strand=Plus/Plus Query 1 ATGTCTAAATTTAATTCTCAGATTACTATGTTATTCATTGTTGTAGCTTTGGTGTGTGCG 60 ||||||||||||| ||||| ||||||| | ||||||| ||||||||||||||||||| | Sbjct 21 ATGTCTAAATTTAGCTCTCAAATTACTACGCTATTCATCGTTGTAGCTTTGGTGTGTGTG 80 Query 61 TTTGTTCCGGCTTTCTCAGTCGAAGAAGCTGAAGCAAACTTATTATGGAATACTTGTCTT 120 |||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct 81 TTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAATCATTATGGAATACTTGTCTT 140 Query 121 GGTT-AAATCACTCCTAAGTGTGCGTTGGATATAGTCGCTGCTGTCTTTGAAAATGGAAC 179 ||| ||||||||||||||||||||||||||||| ||| || |||||||||||||||||| Sbjct 141 -GTTAAAATCACTCCTAAGTGTGCGTTGGATATAATCGGTGTTGTCTTTGAAAATGGAAC 199 Query 180 CATGC-CTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGAAAAATGTGTCACGATACGC 238 ||| | |||||||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct 200 CAT-CTCTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGGAAAGTGTGTCACGATACAC 258 Query 239 TTATTAAGTATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 298 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 259 TTATTAAATATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 318 Query 299 AGAGTGATGACTTGTGGAAACATTGTGTCTCAATCTCCAAAAGTGCTTGA 348 ||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct 319 AGAGTGATGACTTGTGGAATCATTGTGTCTCAATCTCGAAAAGTGCTTGA 368 > Ahg948921 jgi|Araly1|948921|scaffold_800808.1 Length=389 Score = 516 bits (279), Expect = 5e-146 Identities = 327/350 (93%), Gaps = 4/350 (1%) Strand=Plus/Plus Query 1 ATGTCTAAATTTAATTCTCAGATTACTATGTTATTCATTGTTGTAGCTTTGGTGTGTGCG 60 ||||||||||||| ||||| ||||||| | ||||||| ||||||||||||||||||| | Sbjct 21 ATGTCTAAATTTAGCTCTCAAATTACTACGCTATTCATCGTTGTAGCTTTGGTGTGTGTG 80 Query 61 TTTGTTCCGGCTTTCTCAGTCGAAGAAGCTGAAGCAAACTTATTATGGAATACTTGTCTT 120 |||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct 81 TTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAATCATTATGGAATACTTGTCTT 140 Query 121 GGT-TAAATCACTCCTAAGTGTGCGTTGGATATAGTCGCTGCTGTCTTTGAAAATGGAAC 179 || ||||||||||||||||||||||||||||| ||| || |||||||||||||||||| Sbjct 141 -GTAAAAATCACTCCTAAGTGTGCGTTGGATATAATCGGTGTTGTCTTTGAAAATGGAAC 199 Query 180 CATGC-CTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGAAAAATGTGTCACGATACGC 238 ||| | |||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct 200 CAT-CTCTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGGAAAGTGTGTCACGATACGC 258 Query 239 TTATTAAGTATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 298 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 259 TTATTAAATATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 318 Query 299 AGAGTGATGACTTGTGGAAACATTGTGTCTCAATCTCCAAAAGTGCTTGA 348 ||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct 319 AGAGTGATGACTTGTGGAATCATTGTGTCTCAATCTCGAAAAGTGCTTGA 368 > Ahg497471 jgi|Araly1|497471|fgenesh2_kg.585__1__AT5G42955.1 Length=348 Score = 516 bits (279), Expect = 5e-146 Identities = 327/350 (93%), Gaps = 4/350 (1%) Strand=Plus/Plus Query 1 ATGTCTAAATTTAATTCTCAGATTACTATGTTATTCATTGTTGTAGCTTTGGTGTGTGCG 60 ||||||||||||| ||||| ||||||||| ||||||| ||||||||||||||||||| | Sbjct 1 ATGTCTAAATTTAGCTCTCAAATTACTATGCTATTCATCGTTGTAGCTTTGGTGTGTGTG 60 Query 61 TTTGTTCCGGCTTTCTCAGTCGAAGAAGCTGAAGCAAACTTATTATGGAATACTTGTCTT 120 |||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct 61 TTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAATCATTATGGAATACTTGTCTT 120 Query 121 GGT-TAAATCACTCCTAAGTGTGCGTTGGATATAGTCGCTGCTGTCTTTGAAAATGGAAC 179 || ||||||||||||||||||||||||||||| ||| || |||||||||||||||||| Sbjct 121 -GTAAAAATCACTCCTAAGTGTGCGTTGGATATAATCGGTGTTGTCTTTGAAAATGGAAC 179 Query 180 CATGC-CTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGAAAAATGTGTCACGATACGC 238 ||| | |||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct 180 CAT-CTCTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGGAAAGTGTGTCACGATACGC 238 Query 239 TTATTAAGTATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 298 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 239 TTATTAAATATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 298 Query 299 AGAGTGATGACTTGTGGAAACATTGTGTCTCAATCTCCAAAAGTGCTTGA 348 |||||| |||||||||||| ||||||||||||||||| |||||||||||| Sbjct 299 AGAGTGCTGACTTGTGGAATCATTGTGTCTCAATCTCGAAAAGTGCTTGA 348 > Ahg952316 jgi|Araly1|952316|scaffold_58500002.1 Length=389 Score = 505 bits (273), Expect = 1e-142 Identities = 325/350 (93%), Gaps = 4/350 (1%) Strand=Plus/Plus Query 1 ATGTCTAAATTTAATTCTCAGATTACTATGTTATTCATTGTTGTAGCTTTGGTGTGTGCG 60 ||||||||||||| ||||| ||||||| | ||||||| ||||||||||||||||||| | Sbjct 21 ATGTCTAAATTTAGCTCTCAAATTACTACGCTATTCATCGTTGTAGCTTTGGTGTGTGTG 80 Query 61 TTTGTTCCGGCTTTCTCAGTCGAAGAAGCTGAAGCAAACTTATTATGGAATACTTGTCTT 120 |||||||||| ||||||||||||||||||| ||||||| | ||||||||||||||||||| Sbjct 81 TTTGTTCCGGTTTTCTCAGTCGAAGAAGCTAAAGCAAAATCATTATGGAATACTTGTCTT 140 Query 121 GGT-TAAATCACTCCTAAGTGTGCGTTGGATATAGTCGCTGCTGTCTTTGAAAATGGAAC 179 || ||||||||||||||||||||||||||||| ||| || |||||||||||||||||| Sbjct 141 -GTAAAAATCACTCCTAAGTGTGCGTTGGATATAATCGGTGTTGTCTTTGAAAATGGAAC 199 Query 180 CATGC-CTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGAAAAATGTGTCACGATACGC 238 ||| | |||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct 200 CAT-CTCTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGGAAAGTGTGTCACGATACGC 258 Query 239 TTATTAAGTATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 298 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 259 TTATTAAATATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 318 Query 299 AGAGTGATGACTTGTGGAAACATTGTGTCTCAATCTCCAAAAGTGCTTGA 348 |||||| |||||||||||| ||||||||||||||||| |||||||||||| Sbjct 319 AGAGTGCTGACTTGTGGAATCATTGTGTCTCAATCTCGAAAAGTGCTTGA 368 > Ahg952224 jgi|Araly1|952224|scaffold_47400001.1 Length=390 Score = 505 bits (273), Expect = 1e-142 Identities = 325/350 (93%), Gaps = 4/350 (1%) Strand=Plus/Plus Query 1 ATGTCTAAATTTAATTCTCAGATTACTATGTTATTCATTGTTGTAGCTTTGGTGTGTGCG 60 ||||||||||||| ||||| ||||||||| ||||||| ||||||||||||||||||| | Sbjct 21 ATGTCTAAATTTAGCTCTCAAATTACTATGCTATTCATCGTTGTAGCTTTGGTGTGTGTG 80 Query 61 TTTGTTCCGGCTTTCTCAGTCGAAGAAGCTGAAGCAAACTTATTATGGAATACTTGTCTT 120 |||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct 81 TTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAATCATTATGGAATACTTGTCTT 140 Query 121 GGT-TAAATCACTCCTAAGTGTGCGTTGGATATAGTCGCTGCTGTCTTTGAAAATGGAAC 179 || |||||| |||||||||||||||||||||| ||| || |||||||||||||||||| Sbjct 141 -GTAAAAATCAATCCTAAGTGTGCGTTGGATATAATCGGTGTTGTCTTTGAAAATGGAAC 199 Query 180 CATGC-CTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGAAAAATGTGTCACGATACGC 238 ||| | |||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct 200 CAT-CTCTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGGAAAGTGTGTCACGATACGC 258 Query 239 TTATTAAGTATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 298 ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 259 TTATTAAATATATTGCAGATAAACCCATGTTAATTGCCCACGAAACACAATACTTGAAGA 318 Query 299 AGAGTGATGACTTGTGGAAACATTGTGTCTCAATCTCCAAAAGTGCTTGA 348 |||||| |||||||||||| ||||||||||||||||| |||||||||||| Sbjct 319 AGAGTGCTGACTTGTGGAATCATTGTGTCTCAATCTCGAAAAGTGCTTGA 368 > Ahg494746 jgi|Araly1|494746|fgenesh2_kg.8__562__AT5G42955.1 Length=348 Score = 505 bits (273), Expect = 1e-142 Identities = 326/351 (93%), Gaps = 6/351 (2%) Strand=Plus/Plus Query 1 ATGTCTAAATTTAATTCTCAGATTACTATGT-TATTCATTGTTGTAGCTTTGGTGTGTGC 59 ||||||||||||| ||||| ||||| | | |||| ||||||||| ||||||||||||| Sbjct 1 ATGTCTAAATTTAGCTCTCAAATTACCA-CTCTATTTATTGTTGTAACTTTGGTGTGTGC 59 Query 60 GTTTGTTCCGGCTTTCTCAGTCGAAGAAGCTGAAGCAAACTTATTATGGAATACTTGTCT 119 |||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 60 GTTTGTTCTGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAATTATTATGGAATACTTGTCT 119 Query 120 TGGTT-AAATCACTCCTAAGTGTGCGTTGGATATAGTCGCTGCTGTCTTTGAAAATGGAA 178 | || ||||||||||||| ||||||||||||||| |||||| ||||||||||||||||| Sbjct 120 T-CTTAAAATCACTCCTAACTGTGCGTTGGATATAATCGCTGTTGTCTTTGAAAATGGAA 178 Query 179 CCATGC-CTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGAAAAATGTGTCACGATACG 237 |||| | ||||||||||||||||||||||| |||||||||| |||||||||||||||| | Sbjct 179 CCAT-CTCTGATCCTTGTTGCAACGATCTCATCAAAGAAGGGAAAATGTGTCACGATAAG 237 Query 238 CTTATTAAGTATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAG 297 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 238 CTTATTAAATATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAG 297 Query 298 AAGAGTGATGACTTGTGGAAACATTGTGTCTCAATCTCCAAAAGTGCTTGA 348 |||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 298 AAGAGTGATGACTTGTGGAATCATTGTGTCTCAATCTCCAAAAGTGCTTGA 348 > Ahg494722 jgi|Araly1|494722|fgenesh2_kg.8__538__AT5G42955.1 Length=414 Score = 505 bits (273), Expect = 1e-142 Identities = 325/350 (93%), Gaps = 4/350 (1%) Strand=Plus/Plus Query 1 ATGTCTAAATTTAATTCTCAGATTACTATGTTATTCATTGTTGTAGCTTTGGTGTGTGCG 60 ||||||||||||| ||||| ||||||| | ||||||| ||||||||||||||||||| | Sbjct 43 ATGTCTAAATTTAGCTCTCATATTACTACGCTATTCATCGTTGTAGCTTTGGTGTGTGTG 102 Query 61 TTTGTTCCGGCTTTCTCAGTCGAAGAAGCTGAAGCAAACTTATTATGGAATACTTGTCTT 120 |||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct 103 TTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAATCATTATGGAATACTTGTCTT 162 Query 121 GGT-TAAATCACTCCTAAGTGTGCGTTGGATATAGTCGCTGCTGTCTTTGAAAATGGAAC 179 || ||||||||||||||||||||||||||||| ||| || |||||||||||||||||| Sbjct 163 -GTAAAAATCACTCCTAAGTGTGCGTTGGATATAATCGGTGTTGTCTTTGAAAATGGAAC 221 Query 180 CATGC-CTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGAAAAATGTGTCACGATACGC 238 ||| | |||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct 222 CAT-CTCTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGGAAAGTGTGTCACGATACGC 280 Query 239 TTATTAAGTATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 298 ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 281 TTATTAAATATATTGCAGATAAACCCATGTTACTTGCCCACGAAACAGAATACTTGAAGA 340 Query 299 AGAGTGATGACTTGTGGAAACATTGTGTCTCAATCTCCAAAAGTGCTTGA 348 |||||| |||||||||||| ||||||||||||||||| |||||||||||| Sbjct 341 AGAGTGCTGACTTGTGGAATCATTGTGTCTCAATCTCGAAAAGTGCTTGA 390 > Ahg949066 jgi|Araly1|949066|scaffold_800953.1 Length=390 Score = 499 bits (270), Expect = 5e-141 Identities = 325/351 (93%), Gaps = 6/351 (2%) Strand=Plus/Plus Query 1 ATGTCTAAATTTAATTCTCAGATTACTATGTTATTCATTGTTGTAGCTTTGGTGTGTGCG 60 |||||||||||| ||||||||||||| | ||||||| ||||||||||||||||||||| Sbjct 21 ATGTCTAAATTTTGCTCTCAGATTACTACGCTATTCATCGTTGTAGCTTTGGTGTGTGCG 80 Query 61 TTTGTTCCGGCTTTCTCAGTCGAAGAAGCTGAAGCAAACTTATTATGGAATACTTGTCTT 120 |||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct 81 TTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAATCATTATGGAATACTTGTCTT 140 Query 121 GGTT-AAATCACTCCTAAGTGTGCGTTGGATATAGTCGCTGCTGTCTTTGAAAATGGAAC 179 ||| ||||||||||||||||||||||||||||| ||| || |||||||||||||||||| Sbjct 141 -GTTAAAATCACTCCTAAGTGTGCGTTGGATATAATCGGTGTTGTCTTTGAAAATGGAAC 199 Query 180 CATGC-CTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGAAAAATGTGTCACGATACGC 238 ||| | |||||||||||||||||||||||||||||||||| ||| | ||||||||||||| Sbjct 200 CAT-CTCTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGGAAAGTTTGTCACGATACGC 258 Query 239 TTATTAAGTATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 298 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 259 TTATTAAATATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 318 Query 299 AGAGTGATGACTTGTGGAAACATTGTGTCT-CAATCTCCAAAAGTGCTTGA 348 ||||| ||||||| ||||| |||||||| | |||||||||||||||| ||| Sbjct 319 AGAGTAATGACTTATGGAATCATTGTGT-TACAATCTCCAAAAGTGCATGA 368 > Ahg333428 jgi|Araly1|333428|fgenesh1_pm.C_scaffold_1006000001 Length=390 Score = 472 bits (255), Expect = 1e-132 Identities = 303/326 (93%), Gaps = 4/326 (1%) Strand=Plus/Plus Query 1 ATGTCTAAATTTAATTCTCAGATTACTATGTTATTCATTGTTGTAGCTTTGGTGTGTGCG 60 ||||||||||||| ||||||||||||| | ||||||| ||||||||||||||||||||| Sbjct 1 ATGTCTAAATTTAGCTCTCAGATTACTACGCTATTCATCGTTGTAGCTTTGGTGTGTGCG 60 Query 61 TTTGTTCCGGCTTTCTCAGTCGAAGAAGCTGAAGCAAACTTATTATGGAATACTTGTCTT 120 |||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct 61 TTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAATCATTATGGAATACTTGTCTT 120 Query 121 GGTT-AAATCACTCCTAAGTGTGCGTTGGATATAGTCGCTGCTGTCTTTGAAAATGGAAC 179 || ||||||||||||||||||||||||||||| | |||| ||||||||||| ||| || Sbjct 121 -ATTAAAATCACTCCTAAGTGTGCGTTGGATATAATTGCTGTTGTCTTTGAAATTGGTAC 179 Query 180 CATGC-CTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGAAAAATGTGTCACGATACGC 238 ||| | |||||||||| ||||||||||||||||||||||| ||||||||||||||||| | Sbjct 180 CAT-CTCTGATCCTTGCTGCAACGATCTCGTCAAAGAAGGGAAAATGTGTCACGATACAC 238 Query 239 TTATTAAGTATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 298 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 239 TTATTAAATATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 298 Query 299 AGAGTGATGACTTGTGGAAACATTGT 324 ||||||||||||||||||| |||||| Sbjct 299 AGAGTGATGACTTGTGGAATCATTGT 324 > Ahg497449 jgi|Araly1|497449|fgenesh2_kg.474__9__AT5G42955.1 Length=384 Score = 257 bits (139), Expect = 3e-68 Identities = 177/195 (91%), Gaps = 4/195 (2%) Strand=Plus/Plus Query 1 ATGTCTAAATTTAATTCTCAGATTACTATGTTATTCATTGTTGTAGCTTTGGTGTGTGCG 60 ||||||||||||| ||||| ||||||| | ||||||| ||||||||||||||||||| | Sbjct 43 ATGTCTAAATTTAGCTCTCAAATTACTACGCTATTCATCGTTGTAGCTTTGGTGTGTGTG 102 Query 61 TTTGTTCCGGCTTTCTCAGTCGAAGAAGCTGAAGCAAACTTATTATGGAATACTTGTCTT 120 |||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct 103 TTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAATCATTATGGAATACTTGTCTT 162 Query 121 GGT-TAAATCACTCCTAAGTGTGCGTTGGATATAGTCGCTGCTGTCTTTGAAAATGGAAC 179 || ||||||||||||||||||||||||||||| ||| || |||||||||||||||||| Sbjct 163 -GTAAAAATCACTCCTAAGTGTGCGTTGGATATAATCGGTGTTGTCTTTGAAAATGGAAC 221 Query 180 CATGC-CTGATCCTT 193 ||| | ||||||||| Sbjct 222 CAT-CTCTGATCCTT 235 Score = 198 bits (107), Expect = 2e-50 Identities = 119/125 (95%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 224 TGTGTCACGATACGCTTATTAAGTATATTGCAGATAAACCCATGTTAATTGCCCACGAAA 283 |||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct 236 TGTGTCACGATATGCTTATTAAATATATTGCAGATAAACCCATGTTCATTGCCCACGAAA 295 Query 284 CAGAATACTTGAAGAAGAGTGATGACTTGTGGAAACATTGTGTCTCAATCTCCAAAAGTG 343 ||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||| Sbjct 296 CAGAATACTTGAAGAAGAGTGCTGACTTGTGGAATCATTGTGTCTCAATCTCGAAAAGTG 355 Query 344 CTTGA 348 ||||| Sbjct 356 CTTGA 360 > Ahg948922 jgi|Araly1|948922|scaffold_800809.1 Length=214 Score = 252 bits (136), Expect = 1e-66 Identities = 177/196 (90%), Gaps = 5/196 (3%) Strand=Plus/Plus Query 1 ATGTCTAAATTTAATTCTCAGATTACTATGTTATTCATTGTTGTAGCTTTGGTGTGTGCG 60 ||||||||||||| ||||| ||||||| | ||||||| ||||||||||||||||||| | Sbjct 21 ATGTCTAAATTTAGCTCTCAAATTACTACGCTATTCATCGTTGTAGCTTTGGTGTGTGTG 80 Query 61 TTTGTTCCGGCTTTCTCAGTCGAAGAAGCTGAAGCAAACTTATTATGGAATACTTGTCTT 120 |||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct 81 TTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAATCATTATGGAATACTTGTCTT 140 Query 121 GGT-TAAATCACTCCTAAGTGTGCGTTGGATATAGTC-GCTGCTGTCTTTGAAAATGGAA 178 || ||||||||||||||||||||||||||||| || | || ||||||||||||||||| Sbjct 141 -GTAAAAATCACTCCTAAGTGTGCGTTGGATATAATCTGGTGTTGTCTTTGAAAATGGAA 199 Query 179 CCATGC-CTGATCCTT 193 |||| | ||||||||| Sbjct 200 CCAT-CTCTGATCCTT 214 > Ahg497454 jgi|Araly1|497454|fgenesh2_kg.474__14__AT5G42957.1 Length=291 Score = 213 bits (115), Expect = 7e-55 Identities = 144/158 (91%), Gaps = 2/158 (1%) Strand=Plus/Plus Query 1 ATGTCTAAATTTAATTCTCAGATTACTATGTTATTCATTGTTGTAGCTTTGGTGTGTGCG 60 ||||||||||||| ||||| ||||||| | ||||||| ||||||||||||||||||| | Sbjct 1 ATGTCTAAATTTAGCTCTCAAATTACTACGCTATTCATCGTTGTAGCTTTGGTGTGTGTG 60 Query 61 TTTGTTCCGGCTTTCTCAGTCGAAGAAGCTGAAGCAAACTTATTATGGAATACTTGTCTT 120 |||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct 61 TTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAATCATTATGGAATACTTGTCTT 120 Query 121 GGT-TAAATCACTCCTAAGTGTGCGTTGGATATAGTCG 157 || ||||||||||||||||||||||||||||| ||| Sbjct 121 -GTAAAAATCACTCCTAAGTGTGCGTTGGATATAATCG 157 Score = 206 bits (111), Expect = 1e-52 Identities = 127/135 (94%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 214 GAAGGAAAAATGTGTCACGATACGCTTATTAAGTATATTGCAGATAAACCCATGTTAATT 273 ||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 157 GAAGGGAAAGTGTGTCACGATACGCTTATTAAATATATTGCAGATAAACCCATGTTAATT 216 Query 274 GCCCACGAAACAGAATACTTGAAGAAGAGTGATGACTTGTGGAAACATTGTGTCTCAATC 333 ||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||| Sbjct 217 GCCCACGAAACTGAATACTTGAAGAAGAGTGCTGACTTGTGGAATCATTGTGTCTCAATC 276 Query 334 TCCAAAAGTGCTTGA 348 || |||| ||||||| Sbjct 277 TCGAAAATTGCTTGA 291 > Ahg315391 jgi|Araly1|315391|fgenesh1_pm.C_scaffold_2000424 Length=309 Score = 119 bits (64), Expect = 2e-26 Identities = 103/122 (84%), Gaps = 2/122 (2%) Strand=Plus/Plus Query 1 ATGTCTAAATTTAATTCTCAGATTACTATGTTATTCATTGTTGTAGCTTTGGTGTGTGCG 60 ||| ||||| ||| || || ||||||| | ||||||||||||||||||||||||||||| Sbjct 1 ATGGCTAAACTTAGCTCCCATATTACTACGCTATTCATTGTTGTAGCTTTGGTGTGTGCG 60 Query 61 TTTGTTCCGGC-TTTCTCAGTCGAAGAAGCTGAAGCAAACTTATTATGGAATACTTGTCT 119 |||||||| | ||| ||||| |||||||| || ||||| | ||||||| | |||||||| Sbjct 61 TTTGTTCCTGTATTT-TCAGTTGAAGAAGCCGAGGCAAAATCATTATGGGACACTTGTCT 119 Query 120 TG 121 || Sbjct 120 TG 121 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 12362410836 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5