BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G42565.1
Length=348
Score E
Sequences producing significant alignments: (Bits) Value
Ahg948916 jgi|Araly1|948916|scaffold_800803.1 532 5e-151
Ahg948919 jgi|Araly1|948919|scaffold_800806.1 527 2e-149
Ahg948918 jgi|Araly1|948918|scaffold_800805.1 521 1e-147
Ahg948917 jgi|Araly1|948917|scaffold_800804.1 521 1e-147
Ahg948923 jgi|Araly1|948923|scaffold_800810.1 516 5e-146
Ahg948921 jgi|Araly1|948921|scaffold_800808.1 516 5e-146
Ahg497471 jgi|Araly1|497471|fgenesh2_kg.585__1__AT5G42955.1 516 5e-146
Ahg952316 jgi|Araly1|952316|scaffold_58500002.1 505 1e-142
Ahg952224 jgi|Araly1|952224|scaffold_47400001.1 505 1e-142
Ahg494746 jgi|Araly1|494746|fgenesh2_kg.8__562__AT5G42955.1 505 1e-142
Ahg494722 jgi|Araly1|494722|fgenesh2_kg.8__538__AT5G42955.1 505 1e-142
Ahg949066 jgi|Araly1|949066|scaffold_800953.1 499 5e-141
Ahg333428 jgi|Araly1|333428|fgenesh1_pm.C_scaffold_1006000001 472 1e-132
Ahg497449 jgi|Araly1|497449|fgenesh2_kg.474__9__AT5G42955.1 257 3e-68
Ahg948922 jgi|Araly1|948922|scaffold_800809.1 252 1e-66
Ahg497454 jgi|Araly1|497454|fgenesh2_kg.474__14__AT5G42957.1 213 7e-55
Ahg315391 jgi|Araly1|315391|fgenesh1_pm.C_scaffold_2000424 119 2e-26
> Ahg948916 jgi|Araly1|948916|scaffold_800803.1
Length=390
Score = 532 bits (288), Expect = 5e-151
Identities = 330/350 (94%), Gaps = 4/350 (1%)
Strand=Plus/Plus
Query 1 ATGTCTAAATTTAATTCTCAGATTACTATGTTATTCATTGTTGTAGCTTTGGTGTGTGCG 60
||||||||||||| ||||||||||||| | ||||||| |||||||||||||||||||||
Sbjct 22 ATGTCTAAATTTAGCTCTCAGATTACTACGCTATTCATCGTTGTAGCTTTGGTGTGTGCG 81
Query 61 TTTGTTCCGGCTTTCTCAGTCGAAGAAGCTGAAGCAAACTTATTATGGAATACTTGTCTT 120
|||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct 82 TTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAATCATTATGGAATACTTGTCTT 141
Query 121 GGTTAAA-TCACTCCTAAGTGTGCGTTGGATATAGTCGCTGCTGTCTTTGAAAATGGAAC 179
|||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct 142 -GTTAAACTCACTCCTAAGTGTGCGTTGGATATAATCGCTGTTGTCTTTGAAAATGGAAC 200
Query 180 CATGC-CTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGAAAAATGTGTCACGATACGC 238
||| | |||||||||||||||||||||||||||||||||| |||||||||||||| || |
Sbjct 201 CAT-CTCTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGGAAAATGTGTCACGAAACAC 259
Query 239 TTATTAAGTATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 298
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 260 TTATTAAATATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 319
Query 299 AGAGTGATGACTTGTGGAAACATTGTGTCTCAATCTCCAAAAGTGCTTGA 348
||||||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct 320 AGAGTGATGACTTGTGGAATCATTGTGTCTCAATCTCCAAAAGTACTTGA 369
> Ahg948919 jgi|Araly1|948919|scaffold_800806.1
Length=390
Score = 527 bits (285), Expect = 2e-149
Identities = 329/350 (94%), Gaps = 4/350 (1%)
Strand=Plus/Plus
Query 1 ATGTCTAAATTTAATTCTCAGATTACTATGTTATTCATTGTTGTAGCTTTGGTGTGTGCG 60
||||||||||||| ||||||||||||| | ||||||| |||||||||||||||||||||
Sbjct 22 ATGTCTAAATTTAGCTCTCAGATTACTACGCTATTCATCGTTGTAGCTTTGGTGTGTGCG 81
Query 61 TTTGTTCCGGCTTTCTCAGTCGAAGAAGCTGAAGCAAACTTATTATGGAATACTTGTCTT 120
|||||||||| ||||||||||||||||||||||||||| | |||||||||||||||| ||
Sbjct 82 TTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAATCATTATGGAATACTTGTGTT 141
Query 121 GGTT-AAATCACTCCTAAGTGTGCGTTGGATATAGTCGCTGCTGTCTTTGAAAATGGAAC 179
||| ||||||||||||||||||||||||||||| | |||| ||||||||||||||||||
Sbjct 142 -GTTAAAATCACTCCTAAGTGTGCGTTGGATATAATTGCTGTTGTCTTTGAAAATGGAAC 200
Query 180 CATGC-CTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGAAAAATGTGTCACGATACGC 238
||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 201 CAT-CTCTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGGAAAATGTGTCACGATACAC 259
Query 239 TTATTAAGTATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 298
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 260 TTATTAAATATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 319
Query 299 AGAGTGATGACTTGTGGAAACATTGTGTCTCAATCTCCAAAAGTGCTTGA 348
||||||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct 320 AGAGTGATGACTTGTGGAATCATTGTGTCTCAATCTCCAAAAGTACTTGA 369
> Ahg948918 jgi|Araly1|948918|scaffold_800805.1
Length=390
Score = 521 bits (282), Expect = 1e-147
Identities = 328/350 (94%), Gaps = 4/350 (1%)
Strand=Plus/Plus
Query 1 ATGTCTAAATTTAATTCTCAGATTACTATGTTATTCATTGTTGTAGCTTTGGTGTGTGCG 60
||||||||||||| ||||||||||||| | ||||||| |||||||||||||||||||||
Sbjct 22 ATGTCTAAATTTAGCTCTCAGATTACTACGCTATTCATCGTTGTAGCTTTGGTGTGTGCG 81
Query 61 TTTGTTCCGGCTTTCTCAGTCGAAGAAGCTGAAGCAAACTTATTATGGAATACTTGTCTT 120
|||||||||| ||||||||||||||||||||||||||| | |||||||||||||||| ||
Sbjct 82 TTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAATCATTATGGAATACTTGTGTT 141
Query 121 GGTT-AAATCACTCCTAAGTGTGCGTTGGATATAGTCGCTGCTGTCTTTGAAAATGGAAC 179
||| ||||||||||||||||||||||||||||| | |||| ||||||||||||||||||
Sbjct 142 -GTTAAAATCACTCCTAAGTGTGCGTTGGATATAATTGCTGTTGTCTTTGAAAATGGAAC 200
Query 180 CATGC-CTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGAAAAATGTGTCACGATACGC 238
||| | ||||||||||||||||||||||||| |||||||| ||||||||||||||||| |
Sbjct 201 CAT-CTCTGATCCTTGTTGCAACGATCTCGTTAAAGAAGGGAAAATGTGTCACGATACAC 259
Query 239 TTATTAAGTATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 298
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 260 TTATTAAATATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 319
Query 299 AGAGTGATGACTTGTGGAAACATTGTGTCTCAATCTCCAAAAGTGCTTGA 348
||||||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct 320 AGAGTGATGACTTGTGGAATCATTGTGTCTCAATCTCCAAAAGTACTTGA 369
> Ahg948917 jgi|Araly1|948917|scaffold_800804.1
Length=390
Score = 521 bits (282), Expect = 1e-147
Identities = 328/350 (94%), Gaps = 4/350 (1%)
Strand=Plus/Plus
Query 1 ATGTCTAAATTTAATTCTCAGATTACTATGTTATTCATTGTTGTAGCTTTGGTGTGTGCG 60
||||||||||||| ||||||||||||| | ||||||| |||||||||||||||||||||
Sbjct 22 ATGTCTAAATTTAGCTCTCAGATTACTACGCTATTCATCGTTGTAGCTTTGGTGTGTGCG 81
Query 61 TTTGTTCCGGCTTTCTCAGTCGAAGAAGCTGAAGCAAACTTATTATGGAATACTTGTCTT 120
|||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct 82 TTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAATCATTATGGAATACTTGTCTT 141
Query 121 GGTT-AAATCACTCCTAAGTGTGCGTTGGATATAGTCGCTGCTGTCTTTGAAAATGGAAC 179
||| ||||||| ||||||||||||||||||||| | |||| ||||||||||||||||||
Sbjct 142 -GTTAAAATCACACCTAAGTGTGCGTTGGATATAATTGCTGTTGTCTTTGAAAATGGAAC 200
Query 180 CATGC-CTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGAAAAATGTGTCACGATACGC 238
||| | |||||||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 201 CAT-CTCTGATCCTTGCTGCAACGATCTCGTCAAAGAAGGGAAAATGTGTCACGATACAC 259
Query 239 TTATTAAGTATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 298
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 260 TTATTAAATATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 319
Query 299 AGAGTGATGACTTGTGGAAACATTGTGTCTCAATCTCCAAAAGTGCTTGA 348
||||||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct 320 AGAGTGATGACTTGTGGAATCATTGTGTCTCAATCTCCAAAAGTACTTGA 369
> Ahg948923 jgi|Araly1|948923|scaffold_800810.1
Length=389
Score = 516 bits (279), Expect = 5e-146
Identities = 327/350 (93%), Gaps = 4/350 (1%)
Strand=Plus/Plus
Query 1 ATGTCTAAATTTAATTCTCAGATTACTATGTTATTCATTGTTGTAGCTTTGGTGTGTGCG 60
||||||||||||| ||||| ||||||| | ||||||| ||||||||||||||||||| |
Sbjct 21 ATGTCTAAATTTAGCTCTCAAATTACTACGCTATTCATCGTTGTAGCTTTGGTGTGTGTG 80
Query 61 TTTGTTCCGGCTTTCTCAGTCGAAGAAGCTGAAGCAAACTTATTATGGAATACTTGTCTT 120
|||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct 81 TTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAATCATTATGGAATACTTGTCTT 140
Query 121 GGTT-AAATCACTCCTAAGTGTGCGTTGGATATAGTCGCTGCTGTCTTTGAAAATGGAAC 179
||| ||||||||||||||||||||||||||||| ||| || ||||||||||||||||||
Sbjct 141 -GTTAAAATCACTCCTAAGTGTGCGTTGGATATAATCGGTGTTGTCTTTGAAAATGGAAC 199
Query 180 CATGC-CTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGAAAAATGTGTCACGATACGC 238
||| | |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |
Sbjct 200 CAT-CTCTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGGAAAGTGTGTCACGATACAC 258
Query 239 TTATTAAGTATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 298
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 259 TTATTAAATATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 318
Query 299 AGAGTGATGACTTGTGGAAACATTGTGTCTCAATCTCCAAAAGTGCTTGA 348
||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 319 AGAGTGATGACTTGTGGAATCATTGTGTCTCAATCTCGAAAAGTGCTTGA 368
> Ahg948921 jgi|Araly1|948921|scaffold_800808.1
Length=389
Score = 516 bits (279), Expect = 5e-146
Identities = 327/350 (93%), Gaps = 4/350 (1%)
Strand=Plus/Plus
Query 1 ATGTCTAAATTTAATTCTCAGATTACTATGTTATTCATTGTTGTAGCTTTGGTGTGTGCG 60
||||||||||||| ||||| ||||||| | ||||||| ||||||||||||||||||| |
Sbjct 21 ATGTCTAAATTTAGCTCTCAAATTACTACGCTATTCATCGTTGTAGCTTTGGTGTGTGTG 80
Query 61 TTTGTTCCGGCTTTCTCAGTCGAAGAAGCTGAAGCAAACTTATTATGGAATACTTGTCTT 120
|||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct 81 TTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAATCATTATGGAATACTTGTCTT 140
Query 121 GGT-TAAATCACTCCTAAGTGTGCGTTGGATATAGTCGCTGCTGTCTTTGAAAATGGAAC 179
|| ||||||||||||||||||||||||||||| ||| || ||||||||||||||||||
Sbjct 141 -GTAAAAATCACTCCTAAGTGTGCGTTGGATATAATCGGTGTTGTCTTTGAAAATGGAAC 199
Query 180 CATGC-CTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGAAAAATGTGTCACGATACGC 238
||| | |||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct 200 CAT-CTCTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGGAAAGTGTGTCACGATACGC 258
Query 239 TTATTAAGTATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 298
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 259 TTATTAAATATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 318
Query 299 AGAGTGATGACTTGTGGAAACATTGTGTCTCAATCTCCAAAAGTGCTTGA 348
||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 319 AGAGTGATGACTTGTGGAATCATTGTGTCTCAATCTCGAAAAGTGCTTGA 368
> Ahg497471 jgi|Araly1|497471|fgenesh2_kg.585__1__AT5G42955.1
Length=348
Score = 516 bits (279), Expect = 5e-146
Identities = 327/350 (93%), Gaps = 4/350 (1%)
Strand=Plus/Plus
Query 1 ATGTCTAAATTTAATTCTCAGATTACTATGTTATTCATTGTTGTAGCTTTGGTGTGTGCG 60
||||||||||||| ||||| ||||||||| ||||||| ||||||||||||||||||| |
Sbjct 1 ATGTCTAAATTTAGCTCTCAAATTACTATGCTATTCATCGTTGTAGCTTTGGTGTGTGTG 60
Query 61 TTTGTTCCGGCTTTCTCAGTCGAAGAAGCTGAAGCAAACTTATTATGGAATACTTGTCTT 120
|||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct 61 TTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAATCATTATGGAATACTTGTCTT 120
Query 121 GGT-TAAATCACTCCTAAGTGTGCGTTGGATATAGTCGCTGCTGTCTTTGAAAATGGAAC 179
|| ||||||||||||||||||||||||||||| ||| || ||||||||||||||||||
Sbjct 121 -GTAAAAATCACTCCTAAGTGTGCGTTGGATATAATCGGTGTTGTCTTTGAAAATGGAAC 179
Query 180 CATGC-CTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGAAAAATGTGTCACGATACGC 238
||| | |||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct 180 CAT-CTCTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGGAAAGTGTGTCACGATACGC 238
Query 239 TTATTAAGTATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 298
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 239 TTATTAAATATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 298
Query 299 AGAGTGATGACTTGTGGAAACATTGTGTCTCAATCTCCAAAAGTGCTTGA 348
|||||| |||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 299 AGAGTGCTGACTTGTGGAATCATTGTGTCTCAATCTCGAAAAGTGCTTGA 348
> Ahg952316 jgi|Araly1|952316|scaffold_58500002.1
Length=389
Score = 505 bits (273), Expect = 1e-142
Identities = 325/350 (93%), Gaps = 4/350 (1%)
Strand=Plus/Plus
Query 1 ATGTCTAAATTTAATTCTCAGATTACTATGTTATTCATTGTTGTAGCTTTGGTGTGTGCG 60
||||||||||||| ||||| ||||||| | ||||||| ||||||||||||||||||| |
Sbjct 21 ATGTCTAAATTTAGCTCTCAAATTACTACGCTATTCATCGTTGTAGCTTTGGTGTGTGTG 80
Query 61 TTTGTTCCGGCTTTCTCAGTCGAAGAAGCTGAAGCAAACTTATTATGGAATACTTGTCTT 120
|||||||||| ||||||||||||||||||| ||||||| | |||||||||||||||||||
Sbjct 81 TTTGTTCCGGTTTTCTCAGTCGAAGAAGCTAAAGCAAAATCATTATGGAATACTTGTCTT 140
Query 121 GGT-TAAATCACTCCTAAGTGTGCGTTGGATATAGTCGCTGCTGTCTTTGAAAATGGAAC 179
|| ||||||||||||||||||||||||||||| ||| || ||||||||||||||||||
Sbjct 141 -GTAAAAATCACTCCTAAGTGTGCGTTGGATATAATCGGTGTTGTCTTTGAAAATGGAAC 199
Query 180 CATGC-CTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGAAAAATGTGTCACGATACGC 238
||| | |||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct 200 CAT-CTCTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGGAAAGTGTGTCACGATACGC 258
Query 239 TTATTAAGTATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 298
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 259 TTATTAAATATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 318
Query 299 AGAGTGATGACTTGTGGAAACATTGTGTCTCAATCTCCAAAAGTGCTTGA 348
|||||| |||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 319 AGAGTGCTGACTTGTGGAATCATTGTGTCTCAATCTCGAAAAGTGCTTGA 368
> Ahg952224 jgi|Araly1|952224|scaffold_47400001.1
Length=390
Score = 505 bits (273), Expect = 1e-142
Identities = 325/350 (93%), Gaps = 4/350 (1%)
Strand=Plus/Plus
Query 1 ATGTCTAAATTTAATTCTCAGATTACTATGTTATTCATTGTTGTAGCTTTGGTGTGTGCG 60
||||||||||||| ||||| ||||||||| ||||||| ||||||||||||||||||| |
Sbjct 21 ATGTCTAAATTTAGCTCTCAAATTACTATGCTATTCATCGTTGTAGCTTTGGTGTGTGTG 80
Query 61 TTTGTTCCGGCTTTCTCAGTCGAAGAAGCTGAAGCAAACTTATTATGGAATACTTGTCTT 120
|||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct 81 TTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAATCATTATGGAATACTTGTCTT 140
Query 121 GGT-TAAATCACTCCTAAGTGTGCGTTGGATATAGTCGCTGCTGTCTTTGAAAATGGAAC 179
|| |||||| |||||||||||||||||||||| ||| || ||||||||||||||||||
Sbjct 141 -GTAAAAATCAATCCTAAGTGTGCGTTGGATATAATCGGTGTTGTCTTTGAAAATGGAAC 199
Query 180 CATGC-CTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGAAAAATGTGTCACGATACGC 238
||| | |||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct 200 CAT-CTCTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGGAAAGTGTGTCACGATACGC 258
Query 239 TTATTAAGTATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 298
||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 259 TTATTAAATATATTGCAGATAAACCCATGTTAATTGCCCACGAAACACAATACTTGAAGA 318
Query 299 AGAGTGATGACTTGTGGAAACATTGTGTCTCAATCTCCAAAAGTGCTTGA 348
|||||| |||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 319 AGAGTGCTGACTTGTGGAATCATTGTGTCTCAATCTCGAAAAGTGCTTGA 368
> Ahg494746 jgi|Araly1|494746|fgenesh2_kg.8__562__AT5G42955.1
Length=348
Score = 505 bits (273), Expect = 1e-142
Identities = 326/351 (93%), Gaps = 6/351 (2%)
Strand=Plus/Plus
Query 1 ATGTCTAAATTTAATTCTCAGATTACTATGT-TATTCATTGTTGTAGCTTTGGTGTGTGC 59
||||||||||||| ||||| ||||| | | |||| ||||||||| |||||||||||||
Sbjct 1 ATGTCTAAATTTAGCTCTCAAATTACCA-CTCTATTTATTGTTGTAACTTTGGTGTGTGC 59
Query 60 GTTTGTTCCGGCTTTCTCAGTCGAAGAAGCTGAAGCAAACTTATTATGGAATACTTGTCT 119
|||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 60 GTTTGTTCTGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAATTATTATGGAATACTTGTCT 119
Query 120 TGGTT-AAATCACTCCTAAGTGTGCGTTGGATATAGTCGCTGCTGTCTTTGAAAATGGAA 178
| || ||||||||||||| ||||||||||||||| |||||| |||||||||||||||||
Sbjct 120 T-CTTAAAATCACTCCTAACTGTGCGTTGGATATAATCGCTGTTGTCTTTGAAAATGGAA 178
Query 179 CCATGC-CTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGAAAAATGTGTCACGATACG 237
|||| | ||||||||||||||||||||||| |||||||||| |||||||||||||||| |
Sbjct 179 CCAT-CTCTGATCCTTGTTGCAACGATCTCATCAAAGAAGGGAAAATGTGTCACGATAAG 237
Query 238 CTTATTAAGTATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAG 297
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 238 CTTATTAAATATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAG 297
Query 298 AAGAGTGATGACTTGTGGAAACATTGTGTCTCAATCTCCAAAAGTGCTTGA 348
|||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 298 AAGAGTGATGACTTGTGGAATCATTGTGTCTCAATCTCCAAAAGTGCTTGA 348
> Ahg494722 jgi|Araly1|494722|fgenesh2_kg.8__538__AT5G42955.1
Length=414
Score = 505 bits (273), Expect = 1e-142
Identities = 325/350 (93%), Gaps = 4/350 (1%)
Strand=Plus/Plus
Query 1 ATGTCTAAATTTAATTCTCAGATTACTATGTTATTCATTGTTGTAGCTTTGGTGTGTGCG 60
||||||||||||| ||||| ||||||| | ||||||| ||||||||||||||||||| |
Sbjct 43 ATGTCTAAATTTAGCTCTCATATTACTACGCTATTCATCGTTGTAGCTTTGGTGTGTGTG 102
Query 61 TTTGTTCCGGCTTTCTCAGTCGAAGAAGCTGAAGCAAACTTATTATGGAATACTTGTCTT 120
|||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct 103 TTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAATCATTATGGAATACTTGTCTT 162
Query 121 GGT-TAAATCACTCCTAAGTGTGCGTTGGATATAGTCGCTGCTGTCTTTGAAAATGGAAC 179
|| ||||||||||||||||||||||||||||| ||| || ||||||||||||||||||
Sbjct 163 -GTAAAAATCACTCCTAAGTGTGCGTTGGATATAATCGGTGTTGTCTTTGAAAATGGAAC 221
Query 180 CATGC-CTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGAAAAATGTGTCACGATACGC 238
||| | |||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct 222 CAT-CTCTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGGAAAGTGTGTCACGATACGC 280
Query 239 TTATTAAGTATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 298
||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 281 TTATTAAATATATTGCAGATAAACCCATGTTACTTGCCCACGAAACAGAATACTTGAAGA 340
Query 299 AGAGTGATGACTTGTGGAAACATTGTGTCTCAATCTCCAAAAGTGCTTGA 348
|||||| |||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 341 AGAGTGCTGACTTGTGGAATCATTGTGTCTCAATCTCGAAAAGTGCTTGA 390
> Ahg949066 jgi|Araly1|949066|scaffold_800953.1
Length=390
Score = 499 bits (270), Expect = 5e-141
Identities = 325/351 (93%), Gaps = 6/351 (2%)
Strand=Plus/Plus
Query 1 ATGTCTAAATTTAATTCTCAGATTACTATGTTATTCATTGTTGTAGCTTTGGTGTGTGCG 60
|||||||||||| ||||||||||||| | ||||||| |||||||||||||||||||||
Sbjct 21 ATGTCTAAATTTTGCTCTCAGATTACTACGCTATTCATCGTTGTAGCTTTGGTGTGTGCG 80
Query 61 TTTGTTCCGGCTTTCTCAGTCGAAGAAGCTGAAGCAAACTTATTATGGAATACTTGTCTT 120
|||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct 81 TTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAATCATTATGGAATACTTGTCTT 140
Query 121 GGTT-AAATCACTCCTAAGTGTGCGTTGGATATAGTCGCTGCTGTCTTTGAAAATGGAAC 179
||| ||||||||||||||||||||||||||||| ||| || ||||||||||||||||||
Sbjct 141 -GTTAAAATCACTCCTAAGTGTGCGTTGGATATAATCGGTGTTGTCTTTGAAAATGGAAC 199
Query 180 CATGC-CTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGAAAAATGTGTCACGATACGC 238
||| | |||||||||||||||||||||||||||||||||| ||| | |||||||||||||
Sbjct 200 CAT-CTCTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGGAAAGTTTGTCACGATACGC 258
Query 239 TTATTAAGTATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 298
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 259 TTATTAAATATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 318
Query 299 AGAGTGATGACTTGTGGAAACATTGTGTCT-CAATCTCCAAAAGTGCTTGA 348
||||| ||||||| ||||| |||||||| | |||||||||||||||| |||
Sbjct 319 AGAGTAATGACTTATGGAATCATTGTGT-TACAATCTCCAAAAGTGCATGA 368
> Ahg333428 jgi|Araly1|333428|fgenesh1_pm.C_scaffold_1006000001
Length=390
Score = 472 bits (255), Expect = 1e-132
Identities = 303/326 (93%), Gaps = 4/326 (1%)
Strand=Plus/Plus
Query 1 ATGTCTAAATTTAATTCTCAGATTACTATGTTATTCATTGTTGTAGCTTTGGTGTGTGCG 60
||||||||||||| ||||||||||||| | ||||||| |||||||||||||||||||||
Sbjct 1 ATGTCTAAATTTAGCTCTCAGATTACTACGCTATTCATCGTTGTAGCTTTGGTGTGTGCG 60
Query 61 TTTGTTCCGGCTTTCTCAGTCGAAGAAGCTGAAGCAAACTTATTATGGAATACTTGTCTT 120
|||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct 61 TTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAATCATTATGGAATACTTGTCTT 120
Query 121 GGTT-AAATCACTCCTAAGTGTGCGTTGGATATAGTCGCTGCTGTCTTTGAAAATGGAAC 179
|| ||||||||||||||||||||||||||||| | |||| ||||||||||| ||| ||
Sbjct 121 -ATTAAAATCACTCCTAAGTGTGCGTTGGATATAATTGCTGTTGTCTTTGAAATTGGTAC 179
Query 180 CATGC-CTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGAAAAATGTGTCACGATACGC 238
||| | |||||||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 180 CAT-CTCTGATCCTTGCTGCAACGATCTCGTCAAAGAAGGGAAAATGTGTCACGATACAC 238
Query 239 TTATTAAGTATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 298
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 239 TTATTAAATATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGA 298
Query 299 AGAGTGATGACTTGTGGAAACATTGT 324
||||||||||||||||||| ||||||
Sbjct 299 AGAGTGATGACTTGTGGAATCATTGT 324
> Ahg497449 jgi|Araly1|497449|fgenesh2_kg.474__9__AT5G42955.1
Length=384
Score = 257 bits (139), Expect = 3e-68
Identities = 177/195 (91%), Gaps = 4/195 (2%)
Strand=Plus/Plus
Query 1 ATGTCTAAATTTAATTCTCAGATTACTATGTTATTCATTGTTGTAGCTTTGGTGTGTGCG 60
||||||||||||| ||||| ||||||| | ||||||| ||||||||||||||||||| |
Sbjct 43 ATGTCTAAATTTAGCTCTCAAATTACTACGCTATTCATCGTTGTAGCTTTGGTGTGTGTG 102
Query 61 TTTGTTCCGGCTTTCTCAGTCGAAGAAGCTGAAGCAAACTTATTATGGAATACTTGTCTT 120
|||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct 103 TTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAATCATTATGGAATACTTGTCTT 162
Query 121 GGT-TAAATCACTCCTAAGTGTGCGTTGGATATAGTCGCTGCTGTCTTTGAAAATGGAAC 179
|| ||||||||||||||||||||||||||||| ||| || ||||||||||||||||||
Sbjct 163 -GTAAAAATCACTCCTAAGTGTGCGTTGGATATAATCGGTGTTGTCTTTGAAAATGGAAC 221
Query 180 CATGC-CTGATCCTT 193
||| | |||||||||
Sbjct 222 CAT-CTCTGATCCTT 235
Score = 198 bits (107), Expect = 2e-50
Identities = 119/125 (95%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 224 TGTGTCACGATACGCTTATTAAGTATATTGCAGATAAACCCATGTTAATTGCCCACGAAA 283
|||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct 236 TGTGTCACGATATGCTTATTAAATATATTGCAGATAAACCCATGTTCATTGCCCACGAAA 295
Query 284 CAGAATACTTGAAGAAGAGTGATGACTTGTGGAAACATTGTGTCTCAATCTCCAAAAGTG 343
||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||
Sbjct 296 CAGAATACTTGAAGAAGAGTGCTGACTTGTGGAATCATTGTGTCTCAATCTCGAAAAGTG 355
Query 344 CTTGA 348
|||||
Sbjct 356 CTTGA 360
> Ahg948922 jgi|Araly1|948922|scaffold_800809.1
Length=214
Score = 252 bits (136), Expect = 1e-66
Identities = 177/196 (90%), Gaps = 5/196 (3%)
Strand=Plus/Plus
Query 1 ATGTCTAAATTTAATTCTCAGATTACTATGTTATTCATTGTTGTAGCTTTGGTGTGTGCG 60
||||||||||||| ||||| ||||||| | ||||||| ||||||||||||||||||| |
Sbjct 21 ATGTCTAAATTTAGCTCTCAAATTACTACGCTATTCATCGTTGTAGCTTTGGTGTGTGTG 80
Query 61 TTTGTTCCGGCTTTCTCAGTCGAAGAAGCTGAAGCAAACTTATTATGGAATACTTGTCTT 120
|||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct 81 TTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAATCATTATGGAATACTTGTCTT 140
Query 121 GGT-TAAATCACTCCTAAGTGTGCGTTGGATATAGTC-GCTGCTGTCTTTGAAAATGGAA 178
|| ||||||||||||||||||||||||||||| || | || |||||||||||||||||
Sbjct 141 -GTAAAAATCACTCCTAAGTGTGCGTTGGATATAATCTGGTGTTGTCTTTGAAAATGGAA 199
Query 179 CCATGC-CTGATCCTT 193
|||| | |||||||||
Sbjct 200 CCAT-CTCTGATCCTT 214
> Ahg497454 jgi|Araly1|497454|fgenesh2_kg.474__14__AT5G42957.1
Length=291
Score = 213 bits (115), Expect = 7e-55
Identities = 144/158 (91%), Gaps = 2/158 (1%)
Strand=Plus/Plus
Query 1 ATGTCTAAATTTAATTCTCAGATTACTATGTTATTCATTGTTGTAGCTTTGGTGTGTGCG 60
||||||||||||| ||||| ||||||| | ||||||| ||||||||||||||||||| |
Sbjct 1 ATGTCTAAATTTAGCTCTCAAATTACTACGCTATTCATCGTTGTAGCTTTGGTGTGTGTG 60
Query 61 TTTGTTCCGGCTTTCTCAGTCGAAGAAGCTGAAGCAAACTTATTATGGAATACTTGTCTT 120
|||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct 61 TTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAATCATTATGGAATACTTGTCTT 120
Query 121 GGT-TAAATCACTCCTAAGTGTGCGTTGGATATAGTCG 157
|| ||||||||||||||||||||||||||||| |||
Sbjct 121 -GTAAAAATCACTCCTAAGTGTGCGTTGGATATAATCG 157
Score = 206 bits (111), Expect = 1e-52
Identities = 127/135 (94%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 214 GAAGGAAAAATGTGTCACGATACGCTTATTAAGTATATTGCAGATAAACCCATGTTAATT 273
||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 157 GAAGGGAAAGTGTGTCACGATACGCTTATTAAATATATTGCAGATAAACCCATGTTAATT 216
Query 274 GCCCACGAAACAGAATACTTGAAGAAGAGTGATGACTTGTGGAAACATTGTGTCTCAATC 333
||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct 217 GCCCACGAAACTGAATACTTGAAGAAGAGTGCTGACTTGTGGAATCATTGTGTCTCAATC 276
Query 334 TCCAAAAGTGCTTGA 348
|| |||| |||||||
Sbjct 277 TCGAAAATTGCTTGA 291
> Ahg315391 jgi|Araly1|315391|fgenesh1_pm.C_scaffold_2000424
Length=309
Score = 119 bits (64), Expect = 2e-26
Identities = 103/122 (84%), Gaps = 2/122 (2%)
Strand=Plus/Plus
Query 1 ATGTCTAAATTTAATTCTCAGATTACTATGTTATTCATTGTTGTAGCTTTGGTGTGTGCG 60
||| ||||| ||| || || ||||||| | |||||||||||||||||||||||||||||
Sbjct 1 ATGGCTAAACTTAGCTCCCATATTACTACGCTATTCATTGTTGTAGCTTTGGTGTGTGCG 60
Query 61 TTTGTTCCGGC-TTTCTCAGTCGAAGAAGCTGAAGCAAACTTATTATGGAATACTTGTCT 119
|||||||| | ||| ||||| |||||||| || ||||| | ||||||| | ||||||||
Sbjct 61 TTTGTTCCTGTATTT-TCAGTTGAAGAAGCCGAGGCAAAATCATTATGGGACACTTGTCT 119
Query 120 TG 121
||
Sbjct 120 TG 121
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 12362410836
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5