BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G43310.1
Length=3858
Score E
Sequences producing significant alignments: (Bits) Value
Ahg494672 jgi|Araly1|494672|fgenesh2_kg.8__488__AT5G43310.1 4695 0.0
> Ahg494672 jgi|Araly1|494672|fgenesh2_kg.8__488__AT5G43310.1
Length=3695
Score = 4695 bits (2542), Expect = 0.0
Identities = 2966/3165 (94%), Gaps = 52/3165 (2%)
Strand=Plus/Plus
Query 691 GTTATGAAAGTTCTGGAGACACGGAAGATAATGTTGCAGAAAGAACAAGGAATGGCCTTT 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 553 GTTATGAAAGTTCTGGAGACACGGAAGATAATGTTGCAGAAAGAACAAGGAATGGCCTTT 612
Query 751 GCACGTGCTGTGGCAGCTGGTTTTGAGGCTGATGATATGATTCCTCTTATATCTTTCGCC 810
||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||
Sbjct 613 GCACGTGCTGTGGCAGCTGGTTTTGAGGCTGATGATATGATCCCTCTAATATCTTTTGCC 672
Query 811 AAAACTTTTGGAGCCT-CACGTTTGATGGATGCATGTGTGAAATTCATGGACTTGTGGAA 869
||||||||||||| || | |||||||||||||| ||| ||||||| |||||||||||||
Sbjct 673 AAAACTTTTGGAG-CTACTCGTTTGATGGATGCGTGTTTGAAATTTGTGGACTTGTGGAA 731
Query 870 GAAAAAGCACGAAACTGGCCAGTGGGTTGAAATTGAAGCAACAGAAGTAATGGCAACACA 929
|||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct 732 GAAAAAGCACGAAACTGGCCAGTGGGTTGAAATTGAAGCAACAGAATTAATAGCAACACA 791
Query 930 GCCAAACATCTCTACAATGAACGACTCAGGGATTATGTTCGCAAATGCTGCTAATATGCC 989
||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 792 TCCAAATATCTCTGCAATGAACGACTCAGGGATTATGTTTGCAAATGCTGCTAATATGCC 851
Query 990 TGGGACACCTGAAAATAGTGATGCGAAGTCTCCTACAGACAACAAACGAAATGGAAATCA 1049
||||||||||||||||||||||| |||||||||| |||| || |||| ||||||||||||
Sbjct 852 TGGGACACCTGAAAATAGTGATGTGAAGTCTCCTTCAGATAATAAACCAAATGGAAATCA 911
Query 1050 AGAATATGTGCAAGGGCAGCATCGGCAGCCGATGTATGCACCCTGGCCAGTTCACTCCCC 1109
|||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||
Sbjct 912 AGAATATGTGCAAGGGCAACATCCGCAGCCGATGTATGCACCCTGGCCAGTTCACTCTCC 971
Query 1110 ACCGGGCACCTTTCCAGTATTTCAAGGATATACGATGCAGGGCATGCCATACTACCCAGG 1169
|||||| |||||||| |||||||||||||||||||||||||||||||| |||||||| ||
Sbjct 972 ACCGGGTACCTTTCCTGTATTTCAAGGATATACGATGCAGGGCATGCCGTACTACCCGGG 1031
Query 1170 CTATCCAGGAGCTAGTCCATATCCATCTCCCTATCCGTCTACCGATGATTCTAGACGTGG 1229
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct 1032 CTATCCAGGAGCTAGTCCATATCCATCTCCCTATCCATCTACCGATGATTCTAGACGTAG 1091
Query 1230 TTCTGGCCAAAGAAAGGCTCGGAAACATCATTCATCTTGTAGCGAGGACTCCGAATCAGA 1289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1092 TTCTGGCCAAAGAAAGGCTCGGAAACATCATTCATCTTGTAGCGAGGACTCCGAATCAGA 1151
Query 1290 AGATCAGGAAAGAGATAA-TGAAAAATCAAGTAGAAGAAGGAAATCAGGGAAGGTGGTGA 1348
||||||||||||||| || |||||||||| |||||||||| ||||| |||||||||||||
Sbjct 1152 AGATCAGGAAAGAGA-AATTGAAAAATCAGGTAGAAGAAGAAAATCGGGGAAGGTGGTGA 1210
Query 1349 TTCGGAATATAAATTACATTAATTCAAAGAAGCAAGATAATTCTGGAACAGAATCTGATG 1408
|||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct 1211 TTCGGAATATAAATTACATTAATTCAAAGAAGCAAGATCATTCAGGAACAGAATCTGATG 1270
Query 1409 CTGATGACAATCATGAAGAAGTG-GCAAGAGGAGAATGTTACAATGGTAAAGAGAGGGCA 1467
|||||||| ||||||||||| | || | | ||||||||||||||||||||||||| |||
Sbjct 1271 CTGATGACCTTCATGAAGAAG-GAGC-A-A-GAGAATGTTACAATGGTAAAGAGAGAGCA 1326
Query 1468 ACAAAAGGAACAGAGGCTGACACTGGGGATTGGCAGGCCTTCCAGACTTTTTTATTGCAA 1527
| | |||||| ||| |||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct 1327 ATAGAAGGAAAAGAAGCTGACACTGGGGATTGGCAGGCCTTTCAGACTTATTTATTGCAA 1386
Query 1528 GATGCTGACAGAGATGAACGTTCCATTGACCATATGATGGAAAAGGAGATTAGAGGGAAG 1587
||||| || |||||||||||| |||||||||||||||||||||||||||||| | |||||
Sbjct 1387 GATGCCGATAGAGATGAACGTACCATTGACCATATGATGGAAAAGGAGATTACAAGGAAG 1446
Query 1588 AAGAGGCAAGGTACAGGAAAGTATGATCCTTTGGCACATGGTGAACGTGAATCAGGAAAA 1647
||||||||| ||||||| |||||||||||||| ||||||| |||||||||||||||||||
Sbjct 1447 AAGAGGCAAAGTACAGGGAAGTATGATCCTTTAGCACATGATGAACGTGAATCAGGAAAA 1506
Query 1648 TATCAAGAAAGGGATACAGCTGATATTCGGAATGGAAGTGTGACTCGTAGAATCAGGGGA 1707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1507 TATCAAGAAAGGGATACAGCTGATATTCGGAATGGAAGTGTGACTCGTAGAATCAGGGGA 1566
Query 1708 TCTAGTGACTCTCTT-ATGGTTCACCAGAGAGAAAATGGTTTTGAGAATTCTTCTGATCC 1766
|||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1567 TCTAGTGACTCT-TTCATGGTTCACCAGAGAGAAAATGGTTTTGTGAATTCTTCTGATCC 1625
Query 1767 TCTCAACATGAATGGATTTGATACTCCAAGGAATGGTCTGGATAAGAG------A---AA 1817
||||||| | | |||||||||| |||||||||||||||||||||||| | ||
Sbjct 1626 TCTCAAC-T-TA-GGATTTGATAATCCAAGGAATGGTCTGGATAAGAGATCTTCATTTAA 1682
Query 1818 CATGGATGATGATTCTTATATTGTTACTC-GGGTATCTTCAGCC-CGAGATGAAGCTGGA 1875
||||||||||||||||||||| ||||||| |||| ||| || || | |||||||||||||
Sbjct 1683 CATGGATGATGATTCTTATATCGTTACTCGGGGT-TCTGCA-CCACTAGATGAAGCTGGA 1740
Query 1876 AGAAATAAGAGAAATGCTATAGACATTGGTTCAGAGATCTCTTCGTGCTATCAAACTGAT 1935
|||||||||||||||||||| ||||| || |||||||||||| | ||| | |||||||||
Sbjct 1741 AGAAATAAGAGAAATGCTATGGACATCGGATCAGAGATCTCTCCATGCCACCAAACTGAT 1800
Query 1936 GGAAATGAAAGAAAGCAGGTCAATTATGAGCCTCATGATCTGAGCCTGATACCCGAACGG 1995
|||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct 1801 GGAAATGAAAGAAAGCAGGTCAATTATGAGCCTCATGATCTGAGTCTGATACCAGAACGG 1860
Query 1996 GAAACAGAGAAGTTATCAGCTGGGTATGATCCTGCATTAGAGTTTGGATCCAAAGCTTTG 2055
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1861 GAAACAGAGAAGTTATCAGCTGGGTATGATCCTGCACTAGAGTTTGGATCCAAAGCTTTA 1920
Query 2056 AAGAAGAATAGCCAGGCAGCTGGAGGTGCTAAGAAGTTAGTAAAAGATCCAAAATCGAGA 2115
|||||||||| ||||||||| |||||||||||||||||||| |||||||||||||| |||
Sbjct 1921 AAGAAGAATAACCAGGCAGCCGGAGGTGCTAAGAAGTTAGTGAAAGATCCAAAATCAAGA 1980
Query 2116 CTTTCTAAAGATGCTGCAGATAAGAGGAAGGCTCCGGGGCCAATACGGAAAGGAAGACCG 2175
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1981 CTTTCTAAAGATGCTGCAGATAAGAGGAAGGCTCCGGGCCCAATACGGAAAGGAAGACCG 2040
Query 2176 ACAAAGATGAGTCCTTTAGATGAAGCAAGAGCACGTGCTGACAAACTTAGAAATTTCAAA 2235
||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct 2041 ACAAAGATGAGTCCTTTAGATGAAGCAAGAGCACGTGCTGATAAGCTTAGAAATTTCAAA 2100
Query 2236 GCTGACCTCCAGAAAATGAAAAAAGAGAAGGAAGAGGAAGACAGGAAGCGCATCGAAGCT 2295
||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |
Sbjct 2101 GCTGACCTCCAGAAAATGAAAAAGGAGAAGGAAGAGGAAGAGAGGAAGCGCATCGAAGGT 2160
Query 2296 CTGAAAATAGAAAGGCAAAAGCGGATTGCTTCCAAAAGCAACTCAGCGGTAGGGCAGTCA 2355
||||||||||||||||| |||||||||||||| |||||||||||||| ||||| ||||||
Sbjct 2161 CTGAAAATAGAAAGGCAGAAGCGGATTGCTTCTAAAAGCAACTCAGCTGTAGGTCAGTCA 2220
Query 2356 CAGTTGCCTGCACAACAAACaaaaaaaCAAATACTAAACAAGTTTTCTCCC-G-G-TTCT 2412
|||||||||||||||||||||||||||||||| |||||||||||||||||| | | | ||
Sbjct 2221 CAGTTGCCTGCACAACAAACAAAAAAACAAATTCTAAACAAGTTTTCTCCCGGCGCTCCT 2280
Query 2413 AGAGCCTCTAAGTTTAGCGACTCAGAACCAGGTTCATTGTCACCTCTTCAACGTC-TTCC 2471
|||||||||||||||| |||||||||||||| ||||| |||||||||||||||| ||||
Sbjct 2281 CGAGCCTCTAAGTTTAGTGACTCAGAACCAGGATCATTATCACCTCTTCAACGTCTTTCC 2340
Query 2472 TAGAAGAACTACTTCTCTAGGGTCAAATGACTTTCAGAAATTCCCCAAAAATGGTAAACT 2531
||||||||| ||||| ||||||||||||||| ||||||||||||||| ||||||||| |
Sbjct 2341 -AGAAGAACTGCTTCTTTAGGGTCAAATGACTATCAGAAATTCCCCAAGAATGGTAAATT 2399
Query 2532 GAGTACCGTAAGTAAGTCAACAGGAAATATGCTAACAAGGTCGATATCACCGTTACCTCC 2591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2400 GAGTACCGTAAGTAAGTCAACAGGAAATATGCTAACAAGGTCGATATCACCGTTACCTCC 2459
Query 2592 AGCTAAGAGAGAAAGCATAGCAACAGGAATTAGGTTAACCAGGTCGATTTCACCATTACC 2651
| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct 2460 ATCTAAGAGAGAAAGCATAGCAACAGGAAATAGGCTAACCAGGTCGATTTCACCATTACC 2519
Query 2652 TTTGTCTAAGAGGGAAACCAGAGTTAGTCTAGATACGCAGAACAAGTCGGTTTCACA-GA 2710
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 2520 TCTGTCTAAGAGGGAAACCAGAGTTAGTCTAGATACGCAGAACAAGTCGGTTTCA-AGGA 2578
Query 2711 CAAGACGATTATCAGAACCAAAAATGGGTAATACTAGTGCACCAAGTTCGTCAGTGAGGC 2770
||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct 2579 CAAGACGATTATCAGAACCAAAAATGGGTAACAATAGTGCACCAAGTTCGTCAGTGAGGC 2638
Query 2771 CACGGCGCACAATAGCATCAAGAAAAGCATCTGACGCTCCTGAGATAAAGAAACTATCTG 2830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2639 CACGGCGCACAATAGCATCAAGAAAAGCATCTGACGCTCCTGAGATAAAGAAACTATCTG 2698
Query 2831 CCATTGTTAACTATGATATAGCGAAAATTGCATCTCTTCCGGAACTGAAGATAAAACCAA 2890
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2699 CCATTGTTAACTATGATATAGCGAAAATTGCATCTCTTCCGGAACTGAAGATAAAACCAG 2758
Query 2891 CCAAAGGTCCTTCTAATGTTATGGTGAAAGGGGTCGAGAAAACT-AAATCATCAGCGTCT 2949
||||||||||| ||||||||||||||||||||||||||||| || ||||| ||||| |||
Sbjct 2759 CCAAAGGTCCTACTAATGTTATGGTGAAAGGGGTCGAGAAA-CTCAAATCTTCAGCTTCT 2817
Query 2950 GGGATTGAACCAAGTGGTAACAAGAACAAATCCTTGTGCCAAAATGATATTGATGAAACT 3009
| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2818 GAGATTCAACCAAGTGGTAACAAGAACAAATCCTTGTGCCAAAATGATATTGAAGAAACT 2877
Query 3010 CCAGTGGTTGAGAAGACAGTAGTGATGGTGTTGCCAAGTTCAGCTCGAAGTATAAGTAGA 3069
|||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct 2878 CCAGTGATTGAGAAGACAGTAGTGATGGTGTTGCCAAGCTCAGCTCGAAGTATAAGTACA 2937
Query 3070 GATCAGGTAAAAAACGAGAAGTCTGATGTAGTCTCTGAAAACTCCACCATTCGAGAAGGA 3129
|||||||| ||| ||||||||||||||||| ||||||||||| ||||||| || ||| |
Sbjct 2938 GATCAGGTGAAACACGAGAAGTCTGATGTACTCTCTGAAAACACCACCATCCGTCAAGTA 2997
Query 3130 GTTGATAAGGAAGGCATTGTTGAAACAATGCAGGAGTGTGGCAATGATCTAGTCTTAGTT 3189
||||||||||||| | || | ||||||||||||||| |||||| ||||||||||||||||
Sbjct 2998 GTTGATAAGGAAGCC-TT-T-GAAACAATGCAGGAGAGTGGCAGTGATCTAGTCTTAGTT 3054
Query 3190 AGATTGGAGACTCTGAGTGACTTAGTAACAGAAACACCAAAGTTTCTGACAAGTCAAAGT 3249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3055 AGATTGGAGACTCTGAGTGACTTAGTAACAGAAACACCAAAGTTTCTGACAAGTCAAAGT 3114
Query 3250 ATTGTTGCGAAACCATATGAAGCTCCATATGCTCGGGTTTCTTCGTTAGAAGATCCATGT 3309
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3115 ATCGTTGCGAAACCATATGAAGCTCCATATGCTCGGGTTTCTTCGTTAGAAGATCCATGT 3174
Query 3310 ACAGTGTACTCGGACTGTTCCCAAGCACCTCCACCAAGCTTATATTCAAATGAGACAGAG 3369
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3175 ACAGTGTACTCAGACTGTTCCCAAGCACCTCCACCAAGCTTATATTCAAATGAGACAGAG 3234
Query 3370 CAAGAAACTGTCAAAGTCCTTGTACCAGAGAAGAAGATAAGTGAGGCCTCGGAGAAATCT 3429
|||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 3235 CAAGAAACTGGGAAAGTCCTTGTACCAGAGAAGAAGATAAGTGAGGCCTTAGAGAAATCT 3294
Query 3430 CAAACGAAGGAGTCAGCGTCAAAAGGGCTCAGAAAACTGTTGAAATTTGGAAAGAAGAGT 3489
||||| || ||||| |||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 3295 CAAACAAAAGAGTCGGCGTCAAAAGGGCTTAGAAAACTGTTGAAATTTGGAAAAAAGAGT 3354
Query 3490 CAGTCTTCTTCTGTAAGTGAACACCATACCGAGTCTAATAATGCATCTTTTAATAGCAAT 3549
||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 3355 CAGTCTTCTTCCGCAAGTGAACACCATACCGAGTCTAATAATGCATCTTTTAATAGCA-T 3413
Query 3550 -GAGGATCATGAACCAGCTGTAACTGCTGCCACGACAAGTGAAGCTTTTACACTGAAGAA 3608
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 3414 CGAGGATCATGAACCAGCTGTCACTGCTGCCACGACAAGTGAAGCTTTTACACTGAAGAA 3473
Query 3609 TCTCATATCTCAAGATGAAACACCTACAGCAGCAGCTGCTTCACAGAAATCTTCTCGCCA 3668
|||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||
Sbjct 3474 CCTCATATCTCAAGACGAAACACCTACAGCAGCCGCCGCTTCACAGAAATCTTCTCGCCA 3533
Query 3669 TTTTTCATTACTGTCTCCCTTCAAGAACAAGAAGACAGTATCCTGAGTACACAATATAGA 3728
||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| |
Sbjct 3534 TTTTTCAATACTGTCTCCCTTCAAGAACAAGAAGACAGTATCCTGAGGACACAAAATATA 3593
Query 3729 TAAGCTTTGAAATCTTTTAGTGACAGAGTATTTATCATGTAT----T--CA--ATATCGA 3780
|||||||||||| ||| |||||||||||||||||| |||||| | || ||||| |
Sbjct 3594 TAAGCTTTGAAAGCTTGTAGTGACAGAGTATTTATGATGTATCCAATATCATTATATCAA 3653
Query 3781 GCCTCTTCTCCAACAATGTCTGAAAAACACTACAATTGATGCAAA 3825
||||||||| |||||||||| |||| ||||||||||||||||||
Sbjct 3654 GCCTCTTCTGCAACAATGTC--AAAA-CACTACAATTGATGCAAA 3695
Score = 399 bits (216), Expect = 6e-110
Identities = 240/252 (95%), Gaps = 0/252 (0%)
Strand=Plus/Plus
Query 1 ATGAAATCTTCGACTCGGCTTGACTCAGTTGCTTTTCAGCTCACTCCCACTCGAACCCGG 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGAAATCTTCGACTCGGCTTGACTCAGTTGCTTTTCAGCTCACTCCCACTCGAACCCGG 60
Query 61 TGTGATTTGTTGGTAACAGCTAATGGAAAGACTGAGAAAATAGCTACAGGGTTACTTGAT 120
|| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 61 TGCGATTTGTTGGTAACAGCTAATGGAAAGACTGAGAAAATAGCTACAGGATTACTTGAT 120
Query 121 CCATTTCTTGCTCATTTAAAGACTGCAAAAGATCAATTGGAAAAAGGTGGCTATTCGATT 180
|| |||||||| || ||||||||||||||||||||||| ||||||||||| || || |||
Sbjct 121 CCTTTTCTTGCCCACTTAAAGACTGCAAAAGATCAATTAGAAAAAGGTGGTTACTCAATT 180
Query 181 ATTCTCAAGCCTGAAGCTAGTGACAATGCGGCTTGGTTCACTAAAGGAACAATTGAAAGG 240
||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||
Sbjct 181 ATTCTCAAGCCTGAAGCTAGTGATAATGCAGCCTGGTTCACTAAAGGAACAATTGAAAGG 240
Query 241 TTTGTTCGATTT 252
||||||||||||
Sbjct 241 TTTGTTCGATTT 252
Score = 311 bits (168), Expect = 3e-83
Identities = 204/221 (92%), Gaps = 3/221 (1%)
Strand=Plus/Plus
Query 439 AAAGACGATCATCGAGCaaaaaaaGCAGATAGTGCAGAAGGTAGCAGGCCTTTGCTACAG 498
||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 334 AAAGACGATCAGCGAGCAAAAAAAGCAGATAGTACAGAAGGTAGCAGGCCTTTGCTACAG 393
Query 499 CTCAACGAGGAGAAAGCTATTGTCCTTTACGAGCCTGATTCCCATCCAAAGCAAGCAAAT 558
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 394 CTCAACGAGGAGAAAGCTATTGTCCTTTACGAGCCTGATTCACATCCAAAGCAAGCAAAT 453
Query 559 CGGTCTACCTCATCAGATGAAAACTCTAAGTATACCCCTTTGCGTGAATTGTTTTTTGGT 618
||||||||||||||||||||||||||||||||||||||||||| |||| | ||| | |
Sbjct 454 CGGTCTACCTCATCAGATGAAAACTCTAAGTATACCCCTTTGCATGAAAAATATTT-G-T 511
Query 619 TTTCAATGTTTTTCAACAAAGAGAGTAGTTAAGTATCTAAT 659
|||| ||||||| | |||||||||| || || ||||||||
Sbjct 512 TTTCTTTGTTTTT-ATCAAAGAGAGTCGTCAAATATCTAAT 551
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 145798562163
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5