BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G43350.1
Length=1783
Score E
Sequences producing significant alignments: (Bits) Value
Ahg497304 jgi|Araly1|497304|fgenesh2_kg.178__1__AT5G43350.1 2098 0.0
Ahg331059 jgi|Araly1|331059|fgenesh1_pm.C_scaffold_8000402 1851 0.0
Ahg494664 jgi|Araly1|494664|fgenesh2_kg.8__480__AT5G43350.1 1375 0.0
Ahg951712 jgi|Araly1|951712|scaffold_11700004.1 1277 0.0
Ahg494662 jgi|Araly1|494662|fgenesh2_kg.8__478__AT5G43370.1 1164 0.0
Ahg918689 jgi|Araly1|918689|Al_scaffold_0178_3 1064 0.0
Ahg359324 jgi|Araly1|359324|fgenesh1_pg.C_scaffold_117000001 636 0.0
Ahg494667 jgi|Araly1|494667|fgenesh2_kg.8__483__AT5G43340.1 270 2e-71
Ahg489725 jgi|Araly1|489725|fgenesh2_kg.6__2859__AT4G08878.1 128 1e-28
> Ahg497304 jgi|Araly1|497304|fgenesh2_kg.178__1__AT5G43350.1
Length=1603
Score = 2098 bits (1136), Expect = 0.0
Identities = 1347/1444 (93%), Gaps = 33/1444 (2%)
Strand=Plus/Plus
Query 366 GACGGAAAAAAGTGTACGGTCTCACTTTGGTAATGATGATCTTGTGCTCTGTCGCTTCTG 425
||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct 165 GAC-GAAAAAAGTGTACGGTCTCACTTTGATCATGATGATCTTGTGCTCTGTCGCTTCTG 223
Query 426 GTCTCTCTTTTGGCCACGAAGCCAAGGGTGTCATGACCACCCTTTGCTTCTTCAGGTTTT 485
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 224 GTCTCTCCTTTGGCCACGAAGCCAAGGGTGTCATGACCACCCTTTGCTTCTTCAGGTTTT 283
Query 486 GGTTGGGATTTGGTATTGGAGGTGACTACCCACTTTCTGCCACCATCATGTCTGAATACG 545
|| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 284 GGCTGGGATTTGGTATTGGAGGTGACTACCCTCTTTCTGCCACCATCATGTCTGAATACG 343
Query 546 CAAACAAGAAGACCCGTGGGGCTTTCATCGCAGCTGTCTTCGCCATGCAAGGTGTCGGTA 605
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 344 CAAACAAGAAGACCCGTGGGGCTTTCATCGCGGCTGTCTTCGCCATGCAAGGTGTCGGAA 403
Query 606 TCTTGGCTGGAGGTTTCGTGGCACTCGCAGTATCTTCTATATTCGACAAAAAGTTCCCAG 665
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 404 TCTTGGCTGGAGGTTTCGTGGCACTCGCAGTGTCTTCTATATTCGACAAAAAGTTCCCAG 463
Query 666 CTCCAACATATGCAGTAAACAGG---GC-C--CTCTCAACGCCTCCTCAAGTTGACTACA 719
|||||||||||||||| ||||| || | | ||||||||||||||||||||| ||||
Sbjct 464 CTCCAACATATGCAGTCGACAGGTTTGCACAACACTCAACGCCTCCTCAAGTTGATTACA 523
Query 720 TTTGGCGAATCATCGTCATGTTTGGTGCTTTACCCGCAGCTTTGACTTACTACTGGCGTA 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 524 TTTGGCGAATCATCGTCATGTTTGGTGCTTTACCCGCAGCTTTGACTTACTACTGGCGTA 583
Query 780 TGAAGATGCCTGAAACTGCCCGTTACACCGCTTTGGTTGCCAAGAACATCAAACAAGCCA 839
|||||||||| ||||| || ||||||||||||||||| ||||||||||||||||||||||
Sbjct 584 TGAAGATGCCCGAAACAGCTCGTTACACCGCTTTGGTGGCCAAGAACATCAAACAAGCCA 643
Query 840 CAGCCGACATGTCCAAGGTCTTACAAACAGATATCGAGCTTGAGGAAAGGGTGGAGGATG 899
|||| |||||||||||||||||||| |||||| | ||| ||||||| |||| ||||||
Sbjct 644 CAGCAGACATGTCCAAGGTCTTACATACAGATCTTGAGGTTGAGGAGAGGGCCGAGGATT 703
Query 900 ACGTCAAAGACCCCAAACAAAACTATGGCTTGTTCTCCAAGGAATTCCTTAGACGCCATG 959
|||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||
Sbjct 704 TCGTCAAAGACCCCAGACAAAACTATGGCTTGTTCTCCAAGGAATTCCTTCGGCGCCATG 763
Query 960 GGCTTCATCTCCTTGGAACTACCTCCACATGGTTTTTGCTTGACATTGCCTTCTACAGCC 1019
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 764 GGCTTCATCTCCTTGGAACTACCTCCACTTGGTTTTTGCTTGACATTGCCTTCTACAGCC 823
Query 1020 AAAACTTGTTCCAGAAGGATATTTTCTCGGCCATCGGATGGATCCCAAAGGCAGCCACCA 1079
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 824 AAAACTTGTTCCAGAAGGATATTTTCTCGGCCATCGGATGGATCCCAAAGCCAGCCACCA 883
Query 1080 TGAACGCCACCCATGAGGTTTTCAGGATTGCTAGGGCTCAGACTCTTATCGCCCTTTGCA 1139
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 884 TGAACGCGACCCATGAGGTTTTCAGGATTGCTAGGGCTCAGACTCTTATCGCCCTTTGCA 943
Query 1140 GTACAGTCCCAGGCTACTGGTTCACAGTTGCGTTTATTGATACCATTGGAAGGTTTAAGA 1199
||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||
Sbjct 944 GTACAGTCCCAGGCTACTGGTTCACAGTTGCTTTTATTGATATCATTGGAAGGTTTGCGA 1003
Query 1200 TCCAACTAAATGG-ATTTTTCATGATGACCGTGTTTATGTTTGCCATTGCCTTCCCTTAC 1258
|||| |||| ||| |||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct 1004 TCCAGCTAA-TGGGATTTTTCATGATGACCGTTTTTATGTTTGCAATTGCCTTCCCTTAC 1062
Query 1259 AACCACTGGATCAAACCAGAAAACCGTATCGGATTTGTGGTTATGTACTCTCTTACTTTC 1318
|||||||||| |||||||||||||||||||||||| |||||||||||| |||| ||||||
Sbjct 1063 AACCACTGGACCAAACCAGAAAACCGTATCGGATTCGTGGTTATGTACGCTCTCACTTTC 1122
Query 1319 TTCTTCGCCAATTTTGGTCCAAATGCAACCACTTTTATTGTCCCTGCTGAGATATTCCCG 1378
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1123 TTCTTCGCCAATTTTGGTCCAAATGCAACCACTTTTATTGTCCCGGCTGAGATATTCCCG 1182
Query 1379 GCCAGGCTAAGGTCTACATGTCATGGAATATCAGCCGCGGCTGGTAAGGCTGGAGCCATT 1438
||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1183 GCCAGACTAAGGTCAACATGTCATGGAATATCGGCCGCGGCTGGTAAGGCTGGAGCCATC 1242
Query 1439 GTTGGAGCCTTTGGGTTCCTATATGCGGCTCAATCACAAGACAAGGCCAAGGTAGACGCA 1498
||||||||||| |||||||||||||| ||||| |||||||||||||||||||| || |||
Sbjct 1243 GTTGGAGCCTTCGGGTTCCTATATGCAGCTCAGTCACAAGACAAGGCCAAGGTGGATGCA 1302
Query 1499 GGATACCCACCAGGCATCGGAGTTAAGAACTCATTGATCATGCTTGGTGTTCTTAACTTT 1558
||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct 1303 GGATACCCACCAGGCATCGGAGTTAAGAACTCACTGATCGTGCTTGGTGTTCTTAACTTC 1362
Query 1559 ATCGGTATGCTCTTCACCTTCCTTGTCCCAGAGCCCAAAGGCAA-GTCCCTTGAAGAACT 1617
||||||||||||||||||||||||||||||||||| ||||| || |||||| ||||||||
Sbjct 1363 ATCGGTATGCTCTTCACCTTCCTTGTCCCAGAGCC-AAAGGGAAAGTCCCTCGAAGAACT 1421
Query 1618 CTCTGGTGAGGCTGAGGTTAGCCATGACGAGAAATA---at-tat---gt-atg-ttt-- 1666
||||||||||||||||||||||||||||||||||| || ||| || || |||
Sbjct 1422 CTCTGGTGAGGCTGAGGTTAGCCATGACGAGAAATTGTTATATATTTTGTGATAATTTTC 1481
Query 1667 -atttt------gttatttggagtgcgatgtttggttttgttttcattttattgGCTCGT 1719
||||| ||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct 1482 TATTTTAATTTTGTTATTTGGAGTGCGATGTTTGGTTTTGTTTTCATTTTATTCGTTCGC 1541
Query 1720 TGACCTT-AAGTTATGATGTTATAAGAATATTTATGATATCATTTAAATCTTGTCT-AAT 1777
|||| || ||| |||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct 1542 TGAC-TTGAAGGTATGATGTTATAAGAATATTTATGATATCATTTAAATCTTGT-TGAAT 1599
Query 1778 ATTT 1781
||||
Sbjct 1600 ATTT 1603
Score = 261 bits (141), Expect = 1e-68
Identities = 157/165 (95%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 86 GAACAACAACTAGGAGTGCTAAAGGCACTCGATGTTGCGAAGACGCAACTTTATCATTTC 145
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GAAAAACAACTAGGAGTGCTAAAGGCACTCGATGTTGCGAAGACGCAACTTTATCATTTC 60
Query 146 ACGGCGATTGTCATCGCCGGTATGGGTTTCTTTACCGATGCCTACGATCTTTTTTGCGTG 205
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 61 ACGGCGATTGTCATCGCCGGTATGGGTTTCTTTACCGATGCGTACGATCTTTTTTGCGTG 120
Query 206 TCCTTGGTGACGAAACTCCTTGGCCGCATCTACTATTTCAATCCG 250
|||||||| || || ||||||||||| |||||||| ||||| |||
Sbjct 121 TCCTTGGTCACCAAGCTCCTTGGCCGAATCTACTACTTCAACCCG 165
> Ahg331059 jgi|Araly1|331059|fgenesh1_pm.C_scaffold_8000402
Length=1554
Score = 1851 bits (1002), Expect = 0.0
Identities = 1384/1567 (88%), Gaps = 32/1567 (2%)
Strand=Plus/Plus
Query 80 ATGGCCGAACAACAACTAGGAGTGCTAAAGGCACTCGATGTTGCGAAGACGCAACTTTAT 139
|||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||
Sbjct 1 ATGGCCGATCAACAGCTAGGAGTGCTAAAGGCACTTGATGTTGCAAAGACGCAACTTTAC 60
Query 140 CATTTCACGGCGATTGTCATCGCCGGTATGGGTTTCTTTACCGATGCCTACGATCTTTTT 199
||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||
Sbjct 61 CATTTCACGGCGATTGTCATCGCCGGTATGGGTTTCTTTACGGACGCCTACGATCTCTTT 120
Query 200 TGCGTGTCCTTGGTGACGAAACTCCTTGGCCGCATCTACTATTTCAATCCGGAGTCAGCG 259
|| || |||||||| || || || ||||||||| ||||||| |||||||| | |||||
Sbjct 121 TGTGTTTCCTTGGTCACCAAGCTTCTTGGCCGCCTCTACTACTTCAATCCAGCGTCAGAA 180
Query 260 AAGCCTGGCTCACTTCCCCCTCATGTTGCGGCCGCGGTCAACGGTGTGGCCCTTTGTGGA 319
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 181 AAGCCTGGCTCACTTCCCCCTCATGTTGCGGCTGCAGTCAACGGTGTGGCCCTTTGTGGA 240
Query 320 ACCCTTTCTGGTCAACTCTTCTTCGGTTGGCTCGGTGACAAACTCGGACGGAAAAAAGTG 379
|||||| ||||||| ||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct 241 ACCCTTGCTGGTCAGCTCTTCTTCGGATGGCTCGGTGACAAACTTGGACGGAAAAAAGTG 300
Query 380 TACGGTCTCACTTTGGTAATGATGATC-TTGTGCTCTGTCGCTTCTGGTCTCTCTTTTGG 438
|||||| |||||||| | |||||||| || ||||| || ||||| |||||||| || ||
Sbjct 301 TACGGTATCACTTTGATCATGATGATTGTT-TGCTCAGTTGCTTCCGGTCTCTCGTTAGG 359
Query 439 CCACGAAG-CCAAGGGTGTCATGACCACCCTTTGCTTCTTCAGGTTTTGGTT-GGGATTT 496
| | | | |||||||||||||||| || ||||||||||||||||||||| | ||| ||
Sbjct 360 CAAT-ACGGCCAAGGGTGTCATGACGACTCTTTGCTTCTTCAGGTTTTGGCTCGGG-TTC 417
Query 497 GGTATTGGAGGTGACTACCCACTTTCTGCCACCATCATGTCTGAATACGCAAACAAGAAG 556
|| ||||||||||||||||| || |||||||||||||||||||||||||| |||||||||
Sbjct 418 GGCATTGGAGGTGACTACCCTCTATCTGCCACCATCATGTCTGAATACGCTAACAAGAAG 477
Query 557 ACCCGTGGGGCTTTCATCGCAGCTGTCTTCGCCATGCAAGGTGTCGGTATCTTGGCTGGA 616
|| ||||||||||||||||| || || ||||| ||||||||||| ||||||||||| |||
Sbjct 478 ACTCGTGGGGCTTTCATCGCGGCAGTGTTCGCTATGCAAGGTGTAGGTATCTTGGCGGGA 537
Query 617 GGTTTCGTGGCACTCGCAGTATCTTCTATATTCGACAAAAAGTTCCCAGCTCCAACATAT 676
||||| |||||||||||||| ||||||||||||||||||||||||||| | || || |||
Sbjct 538 GGTTTTGTGGCACTCGCAGTGTCTTCTATATTCGACAAAAAGTTCCCATCGCCGACGTAT 597
Query 677 GCAGTAA-ACAGGGCCCTCTCAACGCCTCCTCAAGTTGACTACATTTGGCGAATCATCGT 735
|| || ||||| ||||||||||||||||||| ||| ||||||||||||||| | ||
Sbjct 598 GCCC-AAGACAGGATTCTCTCAACGCCTCCTCAAGCTGATTACATTTGGCGAATCGTTGT 656
Query 736 CATGTTTGGTGCTTTACCCGCAGCTTTGACTTACTACTGGCGTATGAAGATGCCTGAAAC 795
||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct 657 CATGTTTGGCGCTTTACCCGCGGCTTTGACCTACTACTGGCGTATGAAGATGCCTGAAAC 716
Query 796 TGCCCGTTACACCGCTTTGGTTGCCAAGAACATCAA-ACAAGCCACAGCC-GACATGTCC 853
|||||| ||||| ||||| |||||||||||||| || | |||||||| | |||||||||
Sbjct 717 TGCCCGCTACACTGCTTTAGTTGCCAAGAACATTAAGA-AAGCCACA-CAAGACATGTCC 774
Query 854 AAGGTCTTACAAACAGATATCGAGCTTGAGGAAAGGGTGGAGGATGACGTCAAAGACCCC 913
|||||||||||| ||| | ||| |||| ||||||| |||||| | | ||
Sbjct 775 AAGGTCTTACAAGTGGATCTTGAGGTTGAAGAAAGGGCGGAGGA---C--C-----CC-- 822
Query 914 AAACAAAACTATGGCTTGTTCTCCAAGGAATTCCTTAGACGCCATGGGCTTCATCTCCTT 973
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 823 AAACTAAACTATGGCTTGTTCTCCAAGGAATTCCTTAGACGCCATGGGCTTCATCTCCTT 882
Query 974 GGAACTACCTCCACATGGTTTTTGCTTGACATTGCCTTCTACAGCCAAAACTTGTTCCAG 1033
|| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 883 GGGACTACCTCCACTTGGTTTTTGCTTGACATCGCCTTCTACAGCCAAAACTTGTTCCAA 942
Query 1034 AAGGATATTTTCTCGGCCATCGGATGGATCCCAAAGGCAGCCACCATGAACGCCACCCAT 1093
|||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||
Sbjct 943 AAGGATATTTTCTCGGCCATTGGATGGATCCCAAAGGCAGCCACTATGAACGCCATCCAT 1002
Query 1094 GAGGTTTTCAGGATTGCTAGGGCTCAGACTCTTATCGCCCTTTGCAGTACAGTCCCAGGC 1153
|||||||||| |||||||| |||||||||||| || |||||||||||||||||||||||
Sbjct 1003 GAGGTTTTCAAGATTGCTAAGGCTCAGACTCTCATTGCCCTTTGCAGTACAGTCCCAGGT 1062
Query 1154 TACTGGTTCACAGTTGCGTTTATTGATACCATTGGAAGGTTTAAGATCCAACTAAATGG- 1212
||||||||||| ||||| |||||||||| ||||||||||||| ||||||||||| |||
Sbjct 1063 TACTGGTTCACGGTTGCTTTTATTGATATCATTGGAAGGTTTGCGATCCAACTAA-TGGG 1121
Query 1213 ATT-TTTCATGATGACCGTGTTTATGTTTGCCATTGCCTTCCCTTACAACCACTGGATCA 1271
||| ||| | ||||| || |||||||| |||||||||||||| ||||||||||||||
Sbjct 1122 ATTCTTTT-TCATGACGGTCTTTATGTTCGCCATTGCCTTCCCATACAACCACTGGATTT 1180
Query 1272 AACCAGAAAACCGTATCGGATTTGTGGTTATGTACTCTCTTAC-TTTCTTCTTCGCCAAT 1330
|||||| || ||||||||||| ||| |||||||||| || || ||| |||||||||||
Sbjct 1181 TACCAGATAATCGTATCGGATTCGTGATTATGTACTCACTCACATTT-TTCTTCGCCAAC 1239
Query 1331 TTTGGTCCAAATGCAACCACTTTTATTGTCCCTGCTGAGATATTCCCGGCCAGGCTAAGG 1390
||||| || |||||||||||||| |||||||| ||||| || || ||||||||||| ||
Sbjct 1240 TTTGGACCCAATGCAACCACTTTCATTGTCCCAGCTGAAATCTTTCCGGCCAGGCTTAGA 1299
Query 1391 TCTACATGTCATGGAATATCAGCCGCGGCTGGTAAGGCTGGAGCCATTGTTGGAGCCTTT 1450
||||| || |||||||||||||||||| | |||||||||||||| || |||||||||||
Sbjct 1300 TCTACGTGCCATGGAATATCAGCCGCGACAGGTAAGGCTGGAGCTATCGTTGGAGCCTTC 1359
Query 1451 GGGTTCCTATATGCGGCTCAATCACAAGACAAGGCCAAGGTAGACGCAGGATACCCACCA 1510
|||||||||||||| ||||| |||| || ||| ||||| ||||||||||||||||||
Sbjct 1360 GGGTTCCTATATGCTGCTCAGCCACAGGATAAGACCAAGACAGACGCAGGATACCCACCG 1419
Query 1511 GGCATCGGAGTTAAGAACTCATTGATCATGCTTGGTGTTC-TTAACTTTATCGGTATGCT 1569
||||||||||| ||||||||| |||||||||||||||| | |||||||| | ||||||||
Sbjct 1420 GGCATCGGAGTCAAGAACTCACTGATCATGCTTGGTGT-CATTAACTTTGTTGGTATGCT 1478
Query 1570 CTTCACCTTCCTTGTCCCAGAGCCCAAAGGCAAGTCCCTTGAAGAACTCTCTGGTGAGGC 1629
|||||||||||| ||||| |||||||||||||||||||||||||||||||| || |||||
Sbjct 1479 CTTCACCTTCCTCGTCCCTGAGCCCAAAGGCAAGTCCCTTGAAGAACTCTCCGGCGAGGC 1538
Query 1630 TGAGGTT 1636
|||||||
Sbjct 1539 TGAGGTT 1545
> Ahg494664 jgi|Araly1|494664|fgenesh2_kg.8__480__AT5G43350.1
Length=1800
Score = 1375 bits (744), Expect = 0.0
Identities = 909/985 (92%), Gaps = 26/985 (3%)
Strand=Plus/Plus
Query 819 CCAAGAACATCAAACAAGCCACAGCCGACATGTCCAAGGTCTTACAAACAGATATCGAGC 878
||||||||||||||||||||||||| |||||||||||||||||||| |||||| | |||
Sbjct 820 CCAAGAACATCAAACAAGCCACAGCAGACATGTCCAAGGTCTTACATACAGATCTTGAGG 879
Query 879 TTGAGGAAAGGGTGGAGGATGACGTCAAAGACCCCAAACAAAACTATGGCTTGTTCTCCA 938
||||||| |||| |||||| |||||||||||||| |||||||||||||||||||||||
Sbjct 880 TTGAGGAGAGGGCCGAGGATTTCGTCAAAGACCCCAGACAAAACTATGGCTTGTTCTCCA 939
Query 939 AGGAATTCCTTAGACGCCATGGGCTTCATCTCCTTGGAACTACCTCCACATGGTTTTTGC 998
||||||||||| | ||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 940 AGGAATTCCTTCGGCGCCATGGGCTTCATCTCCTTGGGACTACCTCCACTTGGTTTTTGC 999
Query 999 TTGACATTGCCTTCTACAGCCAAAACTTGTTCCAGAAGGATATTTTCTCGGCCATCGGAT 1058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1000 TTGACATTGCCTTCTACAGCCAAAACTTGTTCCAGAAGGATATTTTCTCGGCCATCGGAT 1059
Query 1059 GGATCCCAAAGGCAGCCACCATGAACGCCACCCATGAGGTTTTCAGGATTGCTAGGGCTC 1118
||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1060 GGATCCCAAAGCCAGCCACCATGAACGCGACCCATGAGGTTTTCAGGATTGCTAGGGCTC 1119
Query 1119 AGACTCTTATCGCCCTTTGCAGTACAGTCCCAGGCTACTGGTTCACAGTTGCGTTTATTG 1178
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1120 AGACTCTTATCGCCCTTTGCAGTACAGTCCCAGGCTACTGGTTCACAGTTGCTTTTATTG 1179
Query 1179 ATACCATTGGAAGGTTTAAGATCCAACTAAATGG-ATTTTTCATGATGACCGTGTTTATG 1237
||| ||||||||||||| |||||| | || ||| |||||||||||||||||| ||||||
Sbjct 1180 ATATCATTGGAAGGTTTGCGATCCAGCCAA-TGGGATTTTTCATGATGACCGTTTTTATG 1238
Query 1238 TTTGCCATTGCCTTCCCTTACAACCACTGGATCAAACCAGAAAACCGTATCGGATTTGTG 1297
||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1239 TTTGCAATTGCCTTCCCTTACAACCACTGGACCAAACCAGAAAACCGTATCGGATTTGTG 1298
Query 1298 GTTATGTACTCTCTTACTTTCTTCTTCGCCAATTTTGGTCCAAATGCAACCACTTTTATT 1357
||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1299 GTTATGTACGCTCTCACTTTCTTCTTCGCCAATTTTGGTCCAAATGCAACCACTTTTATT 1358
Query 1358 GTCCCTGCTGAGATATTCCCGGCCAGGCTAAGGTCTACATGTCATGGAATATCAGCCGCG 1417
||||| |||||||| || || |||||||||||||||||||||||||||||||||||||||
Sbjct 1359 GTCCCGGCTGAGATTTTTCCAGCCAGGCTAAGGTCTACATGTCATGGAATATCAGCCGCG 1418
Query 1418 GCTGGTAAGGCTGGAGCCATTGTTGGAGCCTTTGGGTTCCTATATGCGGCTCAATCACAA 1477
|||||||||||||||||||| |||||||||| |||||||||||||| ||||| ||||||
Sbjct 1419 GCTGGTAAGGCTGGAGCCATCATTGGAGCCTTCGGGTTCCTATATGCAGCTCAGTCACAA 1478
Query 1478 GACAAGGCCAAGGTAGACGCAGGATACCCACCAGGCATCGGAGTTAAGAACTCATTGATC 1537
|||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||
Sbjct 1479 GACAAGGCCAAGGTGGATGCAGGATACCCACCAGGCATCGGAGTTAAGAACTCACTGATC 1538
Query 1538 ATGCTTGGTGTTCTTAACTTTATCGGTATGCTCTTCACCTTCCTTGTCCCAGAGCCCAAA 1597
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 1539 GTGCTTGGTGTTCTTAACTTCATCGGTATGCTCTTCACCTTCCTTGTCCCAGAGCC-AAA 1597
Query 1598 GGCAA-GTCCCTTGAAGAACTCTCTGGTGAGGCTGAGGTTAGCCATGACGAGAAATA--- 1653
|| || |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1598 GGGAAAGTCCCTCGAAGAACTCTCTGGTGAGGCTGAGGTTAGCCATGACGAGAAATTGTT 1657
Query 1654 at-tat---gt-atg-ttt---atttt------gttatttggagtgcgatgtttggtttt 1698
|| ||| || || ||| ||||| |||||||||||||||||||||||||||
Sbjct 1658 ATATATTTTGTGATAATTTTCTATTTTAATTTTGTTATTTGGAGTGCGATGTTTGGTTTT 1717
Query 1699 gttttcattttattgGCTCGTTGACCTT-AAGTTATGATGTTATAAGAATATTTATGATA 1757
|||||||||||||| | ||| |||| || ||| |||||||||||||||||||||||||||
Sbjct 1718 GTTTTCATTTTATTCGTTCGCTGAC-TTGAAGGTATGATGTTATAAGAATATTTATGATA 1776
Query 1758 TCATTTAAATCTTGTCT-AATATTT 1781
||||||||||||||| | |||||||
Sbjct 1777 TCATTTAAATCTTGT-TGAATATTT 1800
Score = 977 bits (529), Expect = 0.0
Identities = 741/841 (88%), Gaps = 23/841 (3%)
Strand=Plus/Plus
Query 22 TCAACTCTCCAGAGAAGTTCTTAATTTCTCCTGCCAAGCTGATTAAGAGCTCTAGGAAAT 81
||||||||||| ||||||||||||| |||||| | ||||||||| | | | ||
Sbjct 1 TCAACTCTCCATAGAAGTTCTTAATATCTCCTTCAAAGCTGATT---A-----A-G--AT 49
Query 82 GGCCGAACAACAACTAGGAGTGCTAAAGGCACTCGATGTTGCGAAGACGCAACTTTATCA 141
||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 50 GGCTGAAAAACAACTAGGAGTGCTAAAGGCACTCGATGTTGCGAAGACGCAACTTTACCA 109
Query 142 TTTCACGGCGATTGTCATCGCCGGTATGGGTTTCTTTACCGATGCCTACGATCTTTTTTG 201
||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||
Sbjct 110 TTTCACGGCGATTGTCATCGCCGGTATGGGTTTCTTTACGGACGCCTACGATCTCTTTTG 169
Query 202 CGTGTCCTTGGTGACGAAACTCCTTGGCCGCATCTACTATTTCAATCCGGAGTCAGCGAA 261
|| |||||||| || || || ||||||||| ||||||| |||||||| | ||||| ||
Sbjct 170 TGTTTCCTTGGTCACCAAGCTTCTTGGCCGCCTCTACTACTTCAATCCAGCGTCAGAAAA 229
Query 262 GCCTGGCTCACTTCCCCCTCATGTTGCGGCCGCGGTCAACGGTGTGGCCCTTTGTGGAAC 321
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 230 GCCTGGCTCACTTCCCCCTCATGTTGCGGCTGCAGTCAACGGTGTGGCCCTTTGTGGAAC 289
Query 322 CCTTTCTGGTCAACTCTTCTTCGGTTGGCTCGGTGACAAACTCGGACGGAAAAAAGTGTA 381
|||| ||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct 290 CCTTGCTGGTCAGCTCTTCTTCGGATGGCTCGGTGACAAACTTGGACGGAAAAAAGTGTA 349
Query 382 CGGTCTCACTTTGGTAATGATGATC-TTGTGCTCTGTCGCTTCTGGTCTCTCTTTTGGCC 440
|||| |||||||| | |||||||| || ||||| || ||||| |||||||| ||||||
Sbjct 350 CGGTATCACTTTGATCATGATGATTGTT-TGCTCAGTTGCTTCCGGTCTCTCGTTTGGCA 408
Query 441 ACGAAG-CCAAGGGTGTCATGACCACCCTTTGCTTCTTCAGGTTTTGGTT-GGGATTTGG 498
| | | |||||||||||||||| || ||||||||||||||||||||| | ||| || ||
Sbjct 409 AT-ACGGCCAAGGGTGTCATGACGACTCTTTGCTTCTTCAGGTTTTGGCTCGGG-TTCGG 466
Query 499 TATTGGAGGTGACTACCCACTTTCTGCCACCATCATGTCTGAATACGCAAACAAGAAGAC 558
||||||||||||||||| || |||||||||||||||||||||||||| |||||||||||
Sbjct 467 CATTGGAGGTGACTACCCTCTATCTGCCACCATCATGTCTGAATACGCTAACAAGAAGAC 526
Query 559 CCGTGGGGCTTTCATCGCAGCTGTCTTCGCCATGCAAGGTGTCGGTATCTTGGCTGGAGG 618
||||||||||||||||| || || ||||| ||||||||||| ||||||||||| |||||
Sbjct 527 TCGTGGGGCTTTCATCGCGGCAGTGTTCGCTATGCAAGGTGTAGGTATCTTGGCGGGAGG 586
Query 619 TTTCGTGGCACTCGCAGTATCTTCTATATTCGACAAAAAGTTCCCAGCTCCAACATATGC 678
||| |||||||||||||| ||||||||||||||||||||||||||| | || || |||||
Sbjct 587 TTTTGTGGCACTCGCAGTGTCTTCTATATTCGACAAAAAGTTCCCATCGCCGACGTATGC 646
Query 679 AGTAA-ACAGGGCCCTCTCAACGCCTCCTCAAGTTGACTACATTTGGCGAATCATCGTCA 737
|| ||||| ||||||||||||||||||| ||| || |||||||||||||| ||||
Sbjct 647 CC-AAGACAGGATTCTCTCAACGCCTCCTCAAGCTGATTATATTTGGCGAATCATTGTCA 705
Query 738 TGTTTGGTGCTTTACCCGCAGCTTTGACTTACTACTGGCGTATGAAGATGCCTGAAACTG 797
||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct 706 TGTTTGGCGCTTTACCCGCGGCTTTGACCTACTACTGGCGTATGAAGATGCCTGAAACTG 765
Query 798 CCCGTTACACCGCTTTGGTTGCCAAGAACATCAA-ACAAGCCACAGCC-GACATGTCCAA 855
|||| ||||| ||||| |||||||||||||| || | |||||||| | |||||||||||
Sbjct 766 CCCGCTACACTGCTTTAGTTGCCAAGAACATTAAGA-AAGCCACA-CAAGACATGTCCAA 823
Query 856 G 856
|
Sbjct 824 G 824
> Ahg951712 jgi|Araly1|951712|scaffold_11700004.1
Length=1467
Score = 1277 bits (691), Expect = 0.0
Identities = 962/1091 (88%), Gaps = 26/1091 (2%)
Strand=Plus/Plus
Query 553 GAAGACCCGTGGGGCTTTCATCGCAGCTGTCTTCGCCATGCAAGGTGTCGGTATCTTGGC 612
|||||| ||||||||||||||||| || || ||||| ||||||||||| |||||||||||
Sbjct 366 GAAGACTCGTGGGGCTTTCATCGCGGCAGTGTTCGCTATGCAAGGTGTAGGTATCTTGGC 425
Query 613 TGGAGGTTTCGTGGCACTCGCAGTATCTTCTATATTCGACAAAAAGTTCCCAGCTCCAAC 672
|||||||| |||||||||||||| ||||||||||||||||||||||||||| | || ||
Sbjct 426 GGGAGGTTTTGTGGCACTCGCAGTGTCTTCTATATTCGACAAAAAGTTCCCATCGCCGAC 485
Query 673 ATATGCAGTAA-ACAGGGCCCTCTCAACGCCTCCTCAAGTTGACTACATTTGGCGAATCA 731
||||| || ||||| ||||||||||||||||||| ||| ||||||||||||||||
Sbjct 486 GTATGC-CCAAGACAGGATTCTCTCAACGCCTCCTCAAGCTGATTACATTTGGCGAATCA 544
Query 732 TCGTCATGTTTGGTGCTTTACCCGCAGCTTTGACTTACTACTGGCGTATGAAGATGCCTG 791
| ||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct 545 TTGTCATGTTTGGCGCTTTACCCGCGGCTTTGACCTACTACTGGCGTATGAAGATGCCTG 604
Query 792 AAACTGCCCGTTACACCGCTTTGGTTGCCAAGAACATCAA-ACAAGCCACAGC-CGACAT 849
|||||||||| ||||| ||||| |||||||||||||| || | |||||||| | |||||
Sbjct 605 AAACTGCCCGCTACACTGCTTTAGTTGCCAAGAACATTAAGA-AAGCCACA-CAAGACAT 662
Query 850 GTCCAAGGTCTTACAAACAGATATCGAGCTTGAGGAAAGGGTGGAGGATGACGTCAAAGA 909
|||||||||||||||| ||| | ||| |||| |||| | || | || | ||
Sbjct 663 GTCCAAGGTCTTACAAGTGGATCTTGAGGTTGAAGAAA--G-GG-CG--GA-G-----GA 710
Query 910 CCCCAAACAAAACTATGGCTTGTTCTCCAAGGAATTCCTTAGACGCCATGGGCTTCATCT 969
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 711 CCCCAAACTAAACTATGGCTTGTTCTCCAAGGAATTCCTTAGACGCCATGGGCTTCATCT 770
Query 970 CCTTGGAACTACCTCCACATGGTTTTTGCTTGACATTGCCTTCTACAGCCAAAACTTGTT 1029
|||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct 771 CCTTGGGACTACCTCCACTTGGTTTTTGCTTGACATCGCCTTCTACAGCCAAAACTTGTT 830
Query 1030 CCAGAAGGATATTTTCTCGGCCATCGGATGGATCCCAAAGGCAGCCACCATGAACGCCAC 1089
||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct 831 CCAAAAGGATATTTTCTCGGCCATTGGATGGATCCCAAAGGCAGCCACTATGAACGCCAT 890
Query 1090 CCATGAGGTTTTCAGGATTGCTAGGGCTCAGACTCTTATCGCCCTTTGCAGTACAGTCCC 1149
|||||||||||||| |||||||| |||||||||||| || ||||||||||||||||||||
Sbjct 891 CCATGAGGTTTTCAAGATTGCTAAGGCTCAGACTCTCATTGCCCTTTGCAGTACAGTCCC 950
Query 1150 AGGCTACTGGTTCACAGTTGCGTTTATTGATACCATTGGAAGGTTTAAGATCCAACTAAA 1209
||| ||||||||||| ||||| |||||||||| ||||||||||||| |||||||||||
Sbjct 951 AGGTTACTGGTTCACGGTTGCTTTTATTGATATCATTGGAAGGTTTGCGATCCAACTAA- 1009
Query 1210 TGG-ATT-TTTCATGATGACCGTGTTTATGTTTGCCATTGCCTTCCCTTACAACCACTGG 1267
||| ||| ||| | ||||| || |||||||| |||||||||||||| ||||||||||||
Sbjct 1010 TGGGATTCTTTT-TCATGACGGTCTTTATGTTCGCCATTGCCTTCCCATACAACCACTGG 1068
Query 1268 ATCAAACCAGAAAACCGTATCGGATTTGTGGTTATGTACTCTCTTAC-TTTCTTCTTCGC 1326
|| |||||| || ||||||||||| |||||||||||||| || || ||| ||||||||
Sbjct 1069 ATTTTACCAGATAATCGTATCGGATTCGTGGTTATGTACTCACTCACATTT-TTCTTCGC 1127
Query 1327 CAATTTTGGTCCAAATGCAACCACTTTTATTGTCCCTGCTGAGATATTCCCGGCCAGGCT 1386
||| ||||| || |||||||||||||| |||||||| ||||| || || |||||||||||
Sbjct 1128 CAACTTTGGACCCAATGCAACCACTTTCATTGTCCCAGCTGAAATCTTTCCGGCCAGGCT 1187
Query 1387 AAGGTCTACATGTCATGGAATATCAGCCGCGGCTGGTAAGGCTGGAGCCATTGTTGGAGC 1446
|| ||||| || |||||||||||||||||| | |||||||||||||| || ||||||||
Sbjct 1188 TAGATCTACGTGCCATGGAATATCAGCCGCGACAGGTAAGGCTGGAGCTATCGTTGGAGC 1247
Query 1447 CTTTGGGTTCCTATATGCGGCTCAATCACAAGACAAGGCCAAGGTAGACGCAGGATACCC 1506
||| |||||| ||||||| |||||| |||| || ||| ||||| |||||||||||||||
Sbjct 1248 CTTCGGGTTCTTATATGCTGCTCAACCACAGGATAAGACCAAGACAGACGCAGGATACCC 1307
Query 1507 ACCAGGCATCGGAGTTAAGAACTCATTGATCATGCTTGGTGTTC-TTAACTTTATCGGTA 1565
||| ||||||||||| ||||||||| |||||||||||||||| | |||||||| | ||||
Sbjct 1308 ACCGGGCATCGGAGTCAAGAACTCACTGATCATGCTTGGTGT-CATTAACTTTGTTGGTA 1366
Query 1566 TGCTCTTCACCTTCCTTGTCCCAGAGCCCAAAGGCAAGTCCCTTGAAGAACTCTCTGGTG 1625
|||||||||||||||| ||||| |||||||||||||||||||||||||||||||| || |
Sbjct 1367 TGCTCTTCACCTTCCTCGTCCCTGAGCCCAAAGGCAAGTCCCTTGAAGAACTCTCCGGCG 1426
Query 1626 AGGCTGAGGTT 1636
|||||||||||
Sbjct 1427 AGGCTGAGGTT 1437
Score = 435 bits (235), Expect = 7e-121
Identities = 310/346 (90%), Gaps = 5/346 (1%)
Strand=Plus/Plus
Query 80 ATGGCCGAACAACAACTAGGAGTGCTAAAGGCACTCGATGTTGCGAAGACGCAACTTTAT 139
|||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||
Sbjct 22 ATGGCCGATCAACAGCTAGGAGTGCTAAAGGCACTTGATGTTGCAAAGACGCAACTTTAC 81
Query 140 CATTTCACGGCGATTGTCATCGCCGGTATGGGTTTCTTTACCGATGCCTACGATCTTTTT 199
||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||
Sbjct 82 CATTTCACGGCGATTGTCATCGCCGGTATGGGTTTCTTTACGGACGCCTACGATCTCTTT 141
Query 200 TGCGTGTCCTTGGTGACGAAACTCCTTGGCCGCATCTACTATTTCAATCCGGAGTCAGCG 259
|| || |||||||| || || || ||||||||| ||||||| |||||||| | |||||
Sbjct 142 TGTGTTTCCTTGGTCACCAAGCTTCTTGGCCGCCTCTACTACTTCAATCCAGCGTCAGAA 201
Query 260 AAGCCTGGCTCACTTCCCCCTCATGTTGCGGCCGCGGTCAACGGTGTGGCCCTTTGTGGA 319
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 202 AAGCCTGGCTCACTTCCCCCTCATGTTGCGGCTGCAGTCAACGGTGTGGCCCTTTGTGGA 261
Query 320 ACCCTTTCTGGTCAACTCTTCTTCGGTTGGCTCGGTGA-CAAACTCGGACGGAAAAAAGT 378
|||||| ||||||| ||||||||||| ||||||||||| ||| || ||||||||||||||
Sbjct 262 ACCCTTGCTGGTCAGCTCTTCTTCGGATGGCTCGGTGAACAA-CTTGGACGGAAAAAAGT 320
Query 379 GTACGGTCTCACTTTGGTAATGATGATCTTGT-GCTCTGTCGCTTC 423
||||||| |||||||| | |||||||| | || |||| || |||||
Sbjct 321 GTACGGTATCACTTTGATCATGATGAT-T-GTTGCTCAGTTGCTTC 364
> Ahg494662 jgi|Araly1|494662|fgenesh2_kg.8__478__AT5G43370.1
Length=1188
Score = 1164 bits (630), Expect = 0.0
Identities = 707/745 (95%), Gaps = 2/745 (0%)
Strand=Plus/Plus
Query 893 GAGGATGACGTCAAAGACCCCAAACAAAACTATGGCTTGTTCTCCAAGGAATTCCTTAGA 952
|||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct 436 GAGGATTTCGTCAAAGACCCCAGACAAAACTATGGCTTGTTCTCCAAGGAATTCCTTCGG 495
Query 953 CGCCATGGGCTTCATCTCCTTGGAACTACCTCCACATGGTTTTTGCTTGACATTGCCTTC 1012
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 496 CGCCATGGGCTTCATCTCCTTGGAACTACCTCCACTTGGTTTTTGCTTGACATTGCCTTC 555
Query 1013 TACAGCCAAAACTTGTTCCAGAAGGATATTTTCTCGGCCATCGGATGGATCCCAAAGGCA 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 556 TACAGCCAAAACTTGTTCCAGAAGGATATTTTCTCGGCCATCGGATGGATCCCAAAGCCA 615
Query 1073 GCCACCATGAACGCCACCCATGAGGTTTTCAGGATTGCTAGGGCTCAGACTCTTATCGCC 1132
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct 616 GCCACCATGAACGCGAGCCATGAGGTTTTCAGGATTGCTAGGGCTCAGACTCTTATCGCC 675
Query 1133 CTTTGCAGTACAGTCCCAGGCTACTGGTTCACAGTTGCGTTTATTGATACCATTGGAAGG 1192
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct 676 CTTTGCAGTACAGTCCCAGGCTACTGGTTCACAGTTGCTTTTATTGATATCATTGGAAGG 735
Query 1193 TTTAAGATCCAACTAAATGG-ATTTTTCATGATGACCGTGTTTATGTTTGCCATTGCCTT 1251
||| |||||| |||| ||| |||||||||||||||||| ||||||||||| ||||||||
Sbjct 736 TTTGCGATCCAGCTAA-TGGGATTTTTCATGATGACCGTTTTTATGTTTGCAATTGCCTT 794
Query 1252 CCCTTACAACCACTGGATCAAACCAGAAAACCGTATCGGATTTGTGGTTATGTACTCTCT 1311
||||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||
Sbjct 795 CCCTTACAACCACTGGACCAAACCAGAAAACCGTATCGGATTCGTGGTTATGTACGCTCT 854
Query 1312 TACTTTCTTCTTCGCCAATTTTGGTCCAAATGCAACCACTTTTATTGTCCCTGCTGAGAT 1371
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 855 CACTTTCTTCTTCGCCAATTTTGGTCCAAATGCAACCACTTTTATTGTCCCGGCTGAGAT 914
Query 1372 ATTCCCGGCCAGGCTAAGGTCTACATGTCATGGAATATCAGCCGCGGCTGGTAAGGCTGG 1431
|||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct 915 ATTCCCGGCCAGACTAAGGTCAACATGTCATGGAATATCGGCCGCGGCTGGTAAGGCTGG 974
Query 1432 AGCCATTGTTGGAGCCTTTGGGTTCCTATATGCGGCTCAATCACAAGACAAGGCCAAGGT 1491
|||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct 975 AGCCATCGTTGGAGCCTTCGGGTTCCTATATGCAGCTCAATCACAAGACAAGGCCAAGGT 1034
Query 1492 AGACGCAGGATACCCACCAGGCATCGGAGTTAAGAACTCATTGATCATGCTTGGTGTTCT 1551
||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct 1035 AGATGCAGGATACCCACCAGGCATCGGAGTTAAGAACTCACTGATCGTGCTTGGTGTTCT 1094
Query 1552 TAACTTTATCGGTATGCTCTTCACCTTCCTTGTCCCAGAGCCCAAAGGCAAGTCCCTTGA 1611
|||||| |||||||||||||||||||||||||||||||||||||| |||||||| || ||
Sbjct 1095 TAACTTCATCGGTATGCTCTTCACCTTCCTTGTCCCAGAGCCCAAGGGCAAGTCTCTCGA 1154
Query 1612 AGAACTCTCTGGTGAGGCTGAGGTT 1636
|||||||||||||||||||| |||
Sbjct 1155 GGAACTCTCTGGTGAGGCTGAAGTT 1179
Score = 283 bits (153), Expect = 3e-75
Identities = 179/192 (93%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 666 CTCCAACATATGCAGTAAACAGGGCCCTCTCAACGCCTCCTCAAGTTGACTACATTTGGC 725
|||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||
Sbjct 248 CTCCAACATATGCAGTCGACAGGGTTCTCTCAACGCCTCCTCAAGTTGATTACATTTGGC 307
Query 726 GAATCATCGTCATGTTTGGTGCTTTACCCGCAGCTTTGACTTACTACTGGCGTATGAAGA 785
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 308 GAATCATCGTCATGTATGGTGCTTTACCCGCAGCTTTGACTTACTACTGGCGTATGAAGA 367
Query 786 TGCCTGAAACTGCCCGTTACACCGCTTTGGTTGCCAAGAACATCAAACAAGCCACAGCCG 845
|||| ||||| || ||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 368 TGCCCGAAACAGCTCGTTACACCGCTTTGGTGGCCAAGAACATCAAACAAGCCACAGCAG 427
Query 846 ACATGTCCAAGG 857
||||| || |||
Sbjct 428 ACATGGCCGAGG 439
Score = 239 bits (129), Expect = 6e-62
Identities = 146/154 (95%), Gaps = 1/154 (1%)
Strand=Plus/Plus
Query 481 GTTTTGGTTGGGATTTGGTATTGGAGGTGACTACCCACTTTCTGCCACCATCATGTCTGA 540
||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 95 GTTTTGGCTGGGATTTGGTATTGGAGGTGACTACCCTCTTTCTGCCACCATCATGTCTGA 154
Query 541 ATACGCAAACAAGAAGACCCGTGGGGCTTTCATCGCAGCTGTCTTCGCCATGCAAGGTGT 600
||| || ||||||||||||||| ||||||||||||| ||||||||||| |||||||||||
Sbjct 155 ATATGCTAACAAGAAGACCCGT-GGGCTTTCATCGCGGCTGTCTTCGCTATGCAAGGTGT 213
Query 601 CGGTATCTTGGCTGGAGGTTTCGTGGCACTCGCA 634
|||||||||||||||||||||||||||||||||
Sbjct 214 TGGTATCTTGGCTGGAGGTTTCGTGGCACTCGCA 247
Score = 117 bits (63), Expect = 3e-25
Identities = 65/66 (98%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 415 TGTCGCTTCTGGTCTCTCTTTTGGCCACGAAGCCAAGGGTGTCATGACCACCCTTTGCTT 474
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1 TGTCGCTTCTGGTCTCTCCTTTGGCCACGAAGCCAAGGGTGTCATGACCACCCTTTGCTT 60
Query 475 CTTCAG 480
||||||
Sbjct 61 CTTCAG 66
> Ahg918689 jgi|Araly1|918689|Al_scaffold_0178_3
Length=897
Score = 1064 bits (576), Expect = 0.0
Identities = 800/906 (88%), Gaps = 24/906 (3%)
Strand=Plus/Plus
Query 737 ATGTTTGGTGCTTTACCCGCAGCTTTGACTTACTACTGGCGTATGAAGATGCCTGAAACT 796
|||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 1 ATGTTTGGCGCTTTACCCGCGGCTTTGACCTACTACTGGCGTATGAAGATGCCTGAAACT 60
Query 797 GCCCGTTACACCGCTTTGGTTGCCAAGAACATCAA-ACAAGCCACAGC-CGACATGTCCA 854
||||| ||||| ||||| |||||||||||||| || | |||||||| | ||||||||||
Sbjct 61 GCCCGCTACACTGCTTTAGTTGCCAAGAACATTAAGA-AAGCCACA-CAAGACATGTCCA 118
Query 855 AGGTCTTACAAACAGATATCGAGCTTGAGGAAAGGGTGGAGGATGACGTCAAAGACCCCA 914
||||||||||| ||||| ||| |||| |||| | || | || | |||||||
Sbjct 119 AGGTCTTACAAGTGGATATTGAGGTTGAAGAAA--G-GG-CG--GA-G-----GACCCCA 166
Query 915 AACAAAACTATGGCTTGTTCTCCAAGGAATTCCTTAGACGCCATGGGCTTCATCTCCTTG 974
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 167 AACTAAACTATGGCTTGTTCTCCAAGGAATTCCTTAGACGCCATGGGCTTCATCTCCTTG 226
Query 975 GAACTACCTCCACATGGTTTTTGCTTGACATTGCCTTCTACAGCCAAAACTTGTTCCAGA 1034
| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 227 GGACTACCTCCACTTGGTTTTTGCTTGACATCGCCTTCTACAGCCAAAACTTGTTCCAAA 286
Query 1035 AGGATATTTTCTCGGCCATCGGATGGATCCCAAAGGCAGCCACCATGAACGCCACCCATG 1094
||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||
Sbjct 287 AGGATATTTTCTCGGCCATTGGATGGATCCCAAAGGCAGCCACTATGAACGCCATCCATG 346
Query 1095 AGGTTTTCAGGATTGCTAGGGCTCAGACTCTTATCGCCCTTTGCAGTACAGTCCCAGGCT 1154
||||||||| |||||||| |||||||||||| || ||||||||||||||||||||||| |
Sbjct 347 AGGTTTTCAAGATTGCTAAGGCTCAGACTCTCATTGCCCTTTGCAGTACAGTCCCAGGTT 406
Query 1155 ACTGGTTCACAGTTGCGTTTATTGATACCATTGGAAGGTTTAAGATCCAACTAAATGG-A 1213
|||||||||| ||||| |||||||||| ||||||||||||| ||||||||||| ||| |
Sbjct 407 ACTGGTTCACGGTTGCTTTTATTGATATCATTGGAAGGTTTGCGATCCAACTAA-TGGGA 465
Query 1214 TT-TTTCATGATGACCGTGTTTATGTTTGCCATTGCCTTCCCTTACAACCACTGGATCAA 1272
|| ||| | ||||| || |||||||| |||||||||||||| ||||||||||||||
Sbjct 466 TTCTTTT-TCATGACGGTCTTTATGTTCGCCATTGCCTTCCCATACAACCACTGGATTTT 524
Query 1273 ACCAGAAAACCGTATCGGATTTGTGGTTATGTACTCTCTTAC-TTTCTTCTTCGCCAATT 1331
|||||| || ||||||||||| ||| |||||||||| || || ||| ||||||||||| |
Sbjct 525 ACCAGATAATCGTATCGGATTCGTGATTATGTACTCACTCACATTT-TTCTTCGCCAACT 583
Query 1332 TTGGTCCAAATGCAACCACTTTTATTGTCCCTGCTGAGATATTCCCGGCCAGGCTAAGGT 1391
|||| || |||||||||||||| |||||||| ||||| || || ||||||||||| || |
Sbjct 584 TTGGACCCAATGCAACCACTTTCATTGTCCCAGCTGAAATCTTTCCGGCCAGGCTTAGAT 643
Query 1392 CTACATGTCATGGAATATCAGCCGCGGCTGGTAAGGCTGGAGCCATTGTTGGAGCCTTTG 1451
|||| || |||||||||||||||||| | |||||||||||||| || ||||||||||| |
Sbjct 644 CTACGTGCCATGGAATATCAGCCGCGACAGGTAAGGCTGGAGCTATCGTTGGAGCCTTCG 703
Query 1452 GGTTCCTATATGCGGCTCAATCACAAGACAAGGCCAAGGTAGACGCAGGATACCCACCAG 1511
||||||||||||| ||||| |||| || ||| ||||| |||||||||||||||||| |
Sbjct 704 GGTTCCTATATGCTGCTCAGCCACAGGATAAGACCAAGACAGACGCAGGATACCCACCGG 763
Query 1512 GCATCGGAGTTAAGAACTCATTGATCATGCTTGGTGTTC-TTAACTTTATCGGTATGCTC 1570
|||||||||| ||||||||| |||||||||||||||| | |||||||| | |||||||||
Sbjct 764 GCATCGGAGTCAAGAACTCACTGATCATGCTTGGTGT-CATTAACTTTGTTGGTATGCTC 822
Query 1571 TTCACCTTCCTTGTCCCAGAGCCCAAAGGCAAGTCCCTTGAAGAACTCTCTGGTGAGGCT 1630
||||||||||| ||||| |||||||||||||||||||||||||||||||| || ||||||
Sbjct 823 TTCACCTTCCTCGTCCCTGAGCCCAAAGGCAAGTCCCTTGAAGAACTCTCCGGCGAGGCT 882
Query 1631 GAGGTT 1636
||||||
Sbjct 883 GAGGTT 888
> Ahg359324 jgi|Araly1|359324|fgenesh1_pg.C_scaffold_117000001
Length=401
Score = 636 bits (344), Expect = 0.0
Identities = 383/402 (95%), Gaps = 2/402 (0%)
Strand=Plus/Plus
Query 80 ATGGCCGAACAACAACTAGGAGTGCTAAAGGCACTCGATGTTGCGAAGACGCAACTTTAT 139
||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCTGAAAAACAACTAGGAGTGCTAAAGGCACTCGATGTTGCGAAGACGCAACTTTAT 60
Query 140 CATTTCACGGCGATTGTCATCGCCGGTATGGGTTTCTTTACCGATGCCTACGATCTTTTT 199
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 61 CATTTCACGGCGATTGTCATCGCCGGTATGGGTTTCTTTACCGATGCGTACGATCTTTTT 120
Query 200 TGCGTGTCCTTGGTGACGAAACTCCTTGGCCGCATCTACTATTTCAATCCGGA-GTCAGC 258
|||||||||||||| || || ||||||||||| |||||||| ||| | ||| | ||||||
Sbjct 121 TGCGTGTCCTTGGTCACCAAGCTCCTTGGCCGAATCTACTACTTCGACCCG-ACGTCAGC 179
Query 259 GAAGCCTGGCTCACTTCCCCCTCATGTTGCGGCCGCGGTCAACGGTGTGGCCCTTTGTGG 318
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 180 GAAGCCTGGCTCACTTCCCCCTCATGTTGCGGCCGCGGTCAACGGTGTGGCCCTCTGTGG 239
Query 319 AACCCTTTCTGGTCAACTCTTCTTCGGTTGGCTCGGTGACAAACTCGGACGGAAAAAAGT 378
||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct 240 AACCCTTTCTGGTCAACTCTTCTTCGGATGGCTCGGTGACAAACTCGGAAGGAAAAAAGT 299
Query 379 GTACGGTCTCACTTTGGTAATGATGATCTTGTGCTCTGTCGCTTCTGGTCTCTCTTTTGG 438
|||||||||||||||| | ||||||||| ||||||||||||||||||||||||| |||||
Sbjct 300 GTACGGTCTCACTTTGATCATGATGATCGTGTGCTCTGTCGCTTCTGGTCTCTCCTTTGG 359
Query 439 CCACGAAGCCAAGGGTGTCATGACCACCCTTTGCTTCTTCAG 480
||||||||||||||||||||||||||||||||||||||||||
Sbjct 360 CCACGAAGCCAAGGGTGTCATGACCACCCTTTGCTTCTTCAG 401
> Ahg494667 jgi|Araly1|494667|fgenesh2_kg.8__483__AT5G43340.1
Length=1557
Score = 270 bits (146), Expect = 2e-71
Identities = 821/1135 (72%), Gaps = 94/1135 (8%)
Strand=Plus/Plus
Query 338 TTCTTCGGTTGGCTCGGTGACAAACTCGGACGGAAAAAAGTGTACGGTCT--CACT-TTG 394
|||||||| || || |||||||| || ||||| || | ||| || ||| | |||| ||
Sbjct 262 TTCTTCGGATGTCTTGGTGACAAGCTTGGACGTAAGAGAGTCTATGGTTTGACACTCTT- 320
Query 395 GTAATGATGATCTTGTGCTCTGTCGCTTCTGGTCTCTCTTTTGGCCACGA-AGCC-AAGG 452
| || |||| | | ||||| | | ||||||||| ||| |||| | || | || ||
Sbjct 321 G--ATCATGACCATATGCTCCATTGGTTCTGGTCTTTCTCTTGG--AAGAGACCCAAAAA 376
Query 453 GTGTCATGACCACCCTTTGCTTCTTCAGGTTTTGG-TTGGGATTTGGTATTGGAGGTGAC 511
||||||| || || ||||||||| | || ||| | ||| |||||||| || ||||||
Sbjct 377 CTGTCATGGTAACTCTCTGCTTCTTCCGCTTCTGGCTCGGG-TTTGGTATCGGTGGTGAC 435
Query 512 TACCCACTTTCTGCCACCATCATGTCTGAATACGCAAACAAGAAG-ACCCGTGGGGCTTT 570
|| || || || || || |||||||| || || || ||||| | | || || || || ||
Sbjct 436 TATCCTCTCTCCGCTACGATCATGTCCGAGTATGCCAACAA-ACGTACTCGCGGAGCGTT 494
Query 571 CATCGCAGCTGTCTTCGCCATGCAAGGTGTCGGTAT-CTTG--GCTGGA--GGTTTCGTG 625
||| ||||| || |||| |||||||| || || || |||| || ||| ||||||||
Sbjct 495 CATAGCAGCGGTTTTCGGTATGCAAGGAGTTGGGATCCTTGCTGCAGGAGCGGTTTCGT- 553
Query 626 GCACTCGCAGTATCTTCTATATTCGACAAAAAGTTCCCAGCTCCAACATATGCAGTAAAC 685
||| || || || | ||||| | ||||| ||| ||| | ||| | | ||
Sbjct 554 -TACT---TGTCTCGGCTGTTTTCGAGAGTAAGTTTCCATCTCGGGCTTATATATTGGAC 609
Query 686 AGG-GC--CCTCTCAAC-GCCTCCTCAAGTTGACTACATTTGGCGAATCATCGTCATGTT 741
|| || |||| | || | | || |||| || ||| | ||| | |||||| ||||| |
Sbjct 610 -GGTGCAGCCTC-C-ACTGTC-CCACAAGCAGATTACGTGTGGAGGATCATCCTCATGGT 665
Query 742 TGGTGCTTTACCCGCAGCT-TTGACTTACTACTGGCGTATGAAGATGCCTGAAACTGCCC 800
|| || ||||| || || ||||||||||||||||| ||||||||||| |||||||| |
Sbjct 666 AGGCGCCTTACCAGC-TCTCTTGACTTACTACTGGCGGATGAAGATGCCCGAAACTGCTC 724
Query 801 GTTACACCGCTTTGGTTGCCAAGAACATC-AAACAAGCCA-CAGCCGACATGTCCAAGG- 857
||||||||||| | || ||||||||| | |||||| || | | || ||| | ||||
Sbjct 725 GTTACACCGCTCTAGTCGCCAAGAAC-GCGGAACAAG-CAGCTTCGGATATGACTAAGGT 782
Query 858 TCTTACAAAC--AGATATCG-AG---CTTGAGGAAAGGGTGGAGGATGACGTCAAAG--A 909
|| | | ||| ||| || | || ||| | |||| | || | | | | | |
Sbjct 783 TC-T-C-AACGTAGACATTGAAGCCTCTTCCGCAAAGAAT-GACCAAG-C-T-AGGGTTT 835
Query 910 CCCCAAACAAAACTATGGCTTGTTCTCCAAGGAATTCCTTAGACGCCATGGGCTTCATCT 969
|| || || | | |||||||||||||| | |||||||| | || || || ||||| ||
Sbjct 836 CCTCAGAC--GAGTTTGGCTTGTTCTCCATGAAATTCCTTCGCCGTCACGGACTTCA-CT 892
Query 970 CCTT-GGAACTA-CCTCCACATGGTTTTTGCTTGACATTGCCTTCTACAGCCAAAACTTG 1027
|| ||||| | ||||||||||||| | || |||||||| ||||||||||||||||||
Sbjct 893 TATTCGGAAC-AGCCTCCACATGGTTCCTCCTCGACATTGCTTTCTACAGCCAAAACTTG 951
Query 1028 TTCCAGAAGGATATTTTCTCGGCCATCGGATGGATCCCAAAGGC-AGCCACCATGAACGC 1086
|||||||||||||| ||| | ||||||| ||| | || ||| | |||||||||||
Sbjct 952 TTCCAGAAGGATATCTTCACCACCATCGGTTGGTTACCTTCGGCTAAA-ACCATGAACGC 1010
Query 1087 CACCCATGAGGTTTTCAGGATTGCTAGGGCTCAGACTCTTA-TCGCCCT-TTGCAGTACA 1144
| ||| ||| | |||| ||| ||||||||||| || | || |||| | |||||||||
Sbjct 1011 AATCCAAGAGCTCTTCATGATCGCTAGGGCTCAAAC-CATAATCGCT-TGTTGCAGTACC 1068
Query 1145 GT-CCCAGGCTAC-TGGTTCAC-AG-TTGCGTTTATTGAT-ACCATTGGAAGGTTTAAGA 1199
|| ||| || ||| | ||||| | || | || || ||| | || ||| || ||||
Sbjct 1069 GTTCCC-GGTTACATT-TTCACTATATT-C-TTGATCGATTAT-ATGGGACGGAAAAAGA 1123
Query 1200 TCCAACTAAATGG-ATTTT-TCATGATGACCGTGTTT-ATGTTTGCCA-TT--GCCTTCC 1253
| || | | ||| ||| | ||||||||||| ||| ||||| | | || ||| | |
Sbjct 1124 TTCAGGTCA-TGGGATTCGCT-ATGATGACCGT-TTTCATGTT--C-AGTTTAGCCATAC 1177
Query 1254 CTTACAACCACTGGATCAAACCAGAAAACCGTATCGGATTT-GTGGTTATGTACTCTCTT 1312
| ||| | || |||| | ||| | ||||| || || ||| |||||| | |||||| ||
Sbjct 1178 CGTACCATCATTGGACCTTACCGGCTAACCGGATTGG-TTTCGTGGTTCTCTACTCT-TT 1235
Query 1313 -AC-TTTCTTCTTCGCCAATTTTGGTCCAAATGCAACCACTTTTATTGTCCCTGCTGAGA 1370
|| ||| |||||| |||||||||| || || ||||| ||||| |||||||| |||||||
Sbjct 1236 CACCTTT-TTCTTCTCCAATTTTGGACCTAACGCAACTACTTTCATTGTCCCGGCTGAGA 1294
Query 1371 TATTCCCGGCCAGGCTAAGGTCTACATGTCATGGAATATCAGCCGCGGCTGGTAA 1425
| || ||||| ||| ||||||| || ||||| || || || || ||| | |||||
Sbjct 1295 TTTTTCCGGCGAGGATAAGGTCAACTTGTCACGGTATCTCGGCAGCGTCGGGTAA 1349
> Ahg489725 jgi|Araly1|489725|fgenesh2_kg.6__2859__AT4G08878.1
Length=705
Score = 128 bits (69), Expect = 1e-28
Identities = 403/559 (72%), Gaps = 44/559 (8%)
Strand=Plus/Plus
Query 290 GCCGCGGTCAACGGTGTGGCCCTTTG-TGGAACCCTTTCT-GGTCA-ACTCTTCTTCGGT 346
||||| || | |||||| | |||| | |||| | ||||| || || | | ||||||||
Sbjct 163 GCCGCCGTGAGCGGTGTAG-CCTTCGCCGGAA-CGTTTCTCGGACAGA-TTTTCTTCGGA 219
Query 347 TGGCTCGGTGACAAACTCGGACGGAAAAAAGTGTACGGTCT--CACT-TTGGTAATGATG 403
|| || |||||||| |||||||| || | ||| || ||| | |||| || | || |||
Sbjct 220 TGTCTTGGTGACAAGCTCGGACGTAAGAGAGTCTATGGTTTGACACTCTT-G--ATCATG 276
Query 404 ATC-TTGTGCTCTGTCGCTTCTGGTCTCTCTTTTGGCCACGAAGCC-AAGGGTGTCATGA 461
| | || ||||| | | ||||||||| ||| |||| ||| | || || ||||||
Sbjct 277 ACCATT-TGCTCCATTGGTTCTGGTCTTTCTCTTGGAAACG-ATCCGAAAACCGTCATGG 334
Query 462 CCACCCTTTGCTTCTTCAGGTTT-TGG-TTGGGATTTGGTATTGGAGGTGACTACCCACT 519
|| || ||||||||| |||| ||| | ||| ||||| || || ||||| || || ||
Sbjct 335 TAACTCTCTGCTTCTTC-CGTTTCTGGCTCGGG-TTTGGCATCGGTGGTGATTATCCTCT 392
Query 520 TTCTGCCACCATCATGTCTGAATACGCAAACAAGAAG-ACCCGTGGGGCTTTCATCGCAG 578
|| || || |||||||| || ||||| ||||| | | || || || || ||||| ||||
Sbjct 393 CTCGGCTACAATCATGTCCGAGTACGCTAACAA-ACGTACTCGAGGCGCGTTCATAGCAG 451
Query 579 CTGTCTTCGCCATGCAAGGTGTCGGTAT-CTTG--GCTGGA--GGTTTCGTGGCACTCGC 633
|||| || | |||||||| || || || |||| || ||| |||||| | |||
Sbjct 452 CTGTTTTTGGTATGCAAGGAGTTGGGATACTTGCCGCAGGAGGGGTTTC-T-TTACT--- 506
Query 634 AGTATCTTCTATATTCGACAAAAAGT-TCCCAG-CTCCAACATATGCAGTAAACAGG-GC 690
|| || | ||| || || | |||| | || | ||| | ||| | | || || ||
Sbjct 507 TGTCTCGTATATTTTTGAGATTAAGTAT-CC-GTCTCGGGCCTATATATTGGAC-GGCGC 563
Query 691 --CCTCTCAACGCCTCCTCAAGTTGACTACATTTGGCGAATCATCGTCATGTTTGGTGCT 748
|||| || || | || || | || ||| | ||| | |||||| | ||| | || ||
Sbjct 564 AGCCTC-CACCGTC-CCACAGGCGGATTACGTGTGGAGGATCATCCTGATGGTCGGAGCC 621
Query 749 TTACCCGCAGCT-TTGACTTACTACTGGCGTATGAAGATGCCTGAAACTGCCCGTTACAC 807
||||| || || ||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct 622 TTACCGGC-TCTCTTGACATACTACTGGCGTATGAAGATGCCTGAAACTGCTCGTTACAC 680
Query 808 CGCTTTGGTTGCCAAGAAC 826
|||| | || |||||||||
Sbjct 681 CGCTCTAGTCGCCAAGAAC 699
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 66924560465
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5