BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G43560.1 Length=3789 Score E Sequences producing significant alignments: (Bits) Value Ahg494645 jgi|Araly1|494645|fgenesh2_kg.8__461__AT5G43560.2 4905 0.0 Ahg470409 jgi|Araly1|470409|fgenesh2_kg.1__363__AT1G04300.3 1363 0.0 Ahg358775 jgi|Araly1|358775|fgenesh1_pg.C_scaffold_8002562 1094 0.0 > Ahg494645 jgi|Araly1|494645|fgenesh2_kg.8__461__AT5G43560.2 Length=3428 Score = 4905 bits (2656), Expect = 0.0 Identities = 3098/3309 (94%), Gaps = 39/3309 (1%) Strand=Plus/Plus Query 495 CAGGGGAATGTCAGAGAGTACTAATGAAGATAGTGGAGCAGGAAGATCATCACTGGAAGA 554 |||||||||||| |||||||||||||||||| |||||||||||||||||||| |||| || Sbjct 141 CAGGGGAATGTCTGAGAGTACTAATGAAGATTGTGGAGCAGGAAGATCATCAGTGGATGA 200 Query 555 GAATTCAAATGGACAAAGAAGTCAATCAGAAGAAGCAATCGCTGAGTGGCGTTCTTCTGA 614 ||||||||||||||||||||||||||||||||||| | | || || ||||| || ||||| Sbjct 201 GAATTCAAATGGACAAAGAAGTCAATCAGAAGAAGTACTAGCGGAATGGCGGTCGTCTGA 260 Query 615 ACAAGTTGAGAATGGAACTCCTTCTACATCTCCACCGTATTGGGACATCGATGATGAT-- 672 ||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct 261 TCAAGTGGAGAATGGAACTCCTTCAACATCGCCACCGTATTGGGACATCGATGATGATGA 320 Query 673 -GACGATTTTGGATCAAAACCATCTCAACTATTTGGGAAAAATACTTGGACGATTGAGAA 731 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 321 CGACGATTTTGGATCAAAACCATCTGAACTATTTGGGAAAAATACTTGGACGATTGAGAA 380 Query 732 ATTTTCAGATATCAACAAACGAGAGCTCCGCGGCGATGTTTTTGAAGTCGGGGGTTACAA 791 ||||||||| || |||||||| |||||||| ||||||||||||||||| ||||| ||||| Sbjct 381 ATTTTCAGAAATTAACAAACGGGAGCTCCGTGGCGATGTTTTTGAAGTTGGGGGCTACAA 440 Query 792 ATGGTATATATTAATTTATCCACAAGGGTGTGATGTTTGCAACCATCTCTCTTTGTTTCT 851 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 441 ATGGTATATATTAATTTATCCACAAGGGTGTGATGTTTGCAACCATCTCTCTTTGTTTCT 500 Query 852 ATGTGTTGCACACCATGAAAAGCTTCTTCCAGGCTGGAGTCATTTTGCTCAGTTTACTAT 911 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 501 CTGTGTTGCACACCATGAAAAACTTCTTCCAGGCTGGAGTCATTTTGCTCAGTTTACTAT 560 Query 912 AGCTGTGTCGAATAAAGATCCGAAGAAGTCAAAGCATTCAGATACGTTACACCGGTTTTG 971 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 561 AGCTGTGTCGAATAAAGATCCAAAGAAATCAAAGCATTCAGATACGTTACACCGGTTTTG 620 Query 972 GAAGAAAGAGCATGATTGGGGTTGGAAGAAA-TTTATTGAGTTACCTAAATTGAAGGAAG 1030 ||| ||||| ||||||||||| ||||| ||| |||||||||| ||||||||| ||||||| Sbjct 621 GAAAAAAGAACATGATTGGGGATGGAA-AAAGTTTATTGAGTCACCTAAATTAAAGGAAG 679 Query 1031 GGTTTATAGATGATTCTGGTTGTCTTACAATTAAAGCTCAAGTGCAGGTGATCAGAGAGA 1090 |||| |||||||||| || ||||||||||||||| |||||||| |||||||||||||||| Sbjct 680 GGTTCATAGATGATTATGATTGTCTTACAATTAAGGCTCAAGTCCAGGTGATCAGAGAGA 739 Query 1091 GAGTGGACCGACCTTTTCGCTGCCTTCATTATAAATATAGGGAGGAACTTGTTAGGGTGT 1150 | |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| Sbjct 740 GGGTGGACCGACCTTTTCGCTGCCTTCATTATAAGTATAGGGAGGAACTTGTTCGGGTGT 799 Query 1151 ATTTGGGAAATGTAGAGCAAATTTGCTGGCGGTTTGTGGAAGAGAAAAGAAGCAAGCTTG 1210 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 800 ATTTGACAAATGTAGAGCAAATTTGCTGGCGGTTTGTGGAAGAGAAAAGAAGCAAGCTTG 859 Query 1211 GTAGGTTGATAGAGGACAAGGCAAAATGGAAAAGCTTCTGTGCTTTCTGGATGGGGTTGG 1270 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 860 GTAGGTTGATAGAGGACAAGGCAAAATGGAAAAGCTTCTGTGCTTTCTGGATGGGGTTGG 919 Query 1271 ACCAAAATTCAAGGCGTCGAATGTCCCGAGAGAAAATGGATGTGATTCTAAAAATAGTTG 1330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 920 ACCAAAATTCAAGGCGTCGAATGTCCCGAGAGAAAATGGATGTGATTCTAAAAATAGTTG 979 Query 1331 TAAAACACTTCTTTGTCGAGAAGGAAGTTACATCTACTTTGGTGATGGATTCCTTGTATA 1390 ||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct 980 TAAAACAATTCTTCATTGAGAAGGAAGTTACATCTACTTTGGTGATGGATTCCTTGTATA 1039 Query 1391 GTGGATTGAAGGCTCTTGAAGGCCAAAATAAGAACAAGGAGAGTAGGCCGAGACTAATGG 1450 |||| |||||||||||||||||||||| |||||||||| | | ||||||||||||||||| Sbjct 1040 GTGGGTTGAAGGCTCTTGAAGGCCAAATTAAGAACAAGAAAACTAGGCCGAGACTAATGG 1099 Query 1451 ATACTGAAGAATC-CACAGCTCCAATTGTTAGCGTGGACAAAGATTCGTTTGCATTAGTT 1509 |||||||||||| | |||||||||||||||| |||||||||||| |||||||||||||| Sbjct 1100 ATACTGAAGAATTGC-CAGCTCCAATTGTTAGTGTGGACAAAGATACGTTTGCATTAGTT 1158 Query 1510 GATGATGTGTTATTACTCTTAGAGAAGGCTGCTCTGGAGCCATTGCCTAAAAAAGAGGAA 1569 ||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||| Sbjct 1159 GATGATGTGTTATTACTCTTAGAGAGGGCTGCTGTGGAGCCATTGCCTACAAAAGAGGAA 1218 Query 1570 AAGAGTTCTCAAAACCGTACGAAGGATGGGAATGCTGGAGAGGAATTCAGTAGAGAAGCC 1629 || ||| | |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1219 AAAAGTCCCCAAAACCGCACGAAGGATGGGAATGCTGGAGAGGAATTCAGTAGAGAAGCC 1278 Query 1630 GTTGAGCGTGATGATAGGCGTTTAACTGAATTGGGTAGACGGACTGTGGAGATATTTGTT 1689 ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1279 ATTGAGCGTGATGAGAGGCGTTTAACTGAGTTGGGTAGACGGACTGTGGAGATATTTGTT 1338 Query 1690 CTTGCACATATCTTCAGCAACAAAATTGAAGTTGCATACCAAGAAGCTATTGCATGGAAA 1749 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1339 CTTGCACATATCTTCAGCAACAAAATTGAAGTTGCATACCAAGAAGCTATTGCATGGAAA 1398 Query 1750 AGGCAAGAAGAACTTATTCGTGAAGAAGAGGAAGCGTGGCTGGCAGAAAGCGAACAGAAG 1809 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1399 CGGCAAGAAGAACTTATTCGTGAAGAGGAGGAAGCGTGGCTGGCAGAAAGCGAACAGAAG 1458 Query 1810 GGCaaaagaggagcatctgaaaaagagaagaaatctaagaagaaacaggcgaaacagaaa 1869 | |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1459 GCCAAAAGAGGACCATCCGAAAAAGAGAAGAAATCTAAGAAGAAACAGGCGAAACAGAAA 1518 Query 1870 aagaacaaaaacaaaggaaaggaaatgaggaaagaagacaaggtgagaacccaaacagaa 1929 ||||||||||||||||||||||||| | ||||||||| ||||||| ||||||||||||| Sbjct 1519 AAGAACAAAAACAAAGGAAAGGAAAAAAAGAAAGAAGAGAAGGTGAAAACCCAAACAGAA 1578 Query 1930 gaaagggaaaTTGAGAAAGAGGAATGTGTGAGAGCGATAGCAGAATCGTCAGCTGAAAAA 1989 |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1579 GAAAGGGATATTGAGAAAGAGGAATGTGTGAGAGCGAAAGCAGAATCGTCAGCTGAAAAA 1638 Query 1990 CCTGACACACTTGGAGATGTCTCTGACGTGTCTGATTCAGTAGATAGTTCAGCTGAAATA 2049 ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct 1639 CCTGACACACTTGGAGATGTCTCTGACCTTTCTGATTCAGTAGATAGTTCAGCTGAAATA 1698 Query 2050 CTTCAGCTTGATTCAGAAGATAGAGAGAGTAGTCCTGTTCATTGGGAAATGGATGCCTCA 2109 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1699 CTTCAGCTTGATTCAGAAGATAGAGAGAGTAGTCCTGTTCATTGGGAAATAGATGCCTCA 1758 Query 2110 GAGGTTCATCCTCCTTCTGCAGGAGACACTAGCAGAGGAAGAGGCAATTCTTTTTCTATA 2169 ||| || |||||| |||| ||||||||||||||||||||||||||||||| || | |||| Sbjct 1759 GAGATTAATCCTCTTTCTTCAGGAGACACTAGCAGAGGAAGAGGCAATTCCTTATGTATA 1818 Query 2170 CCTAATGGAGTTGCAG-A-AA-GAAAGGGTCTGTCCACAATGGATGATAGTTCTTCAACC 2226 |||||||||||||||| | || |||| ||||||||||||||||||||||||||||||||| Sbjct 1819 CCTAATGGAGTTGCAGCAGAAAGAAAAGGTCTGTCCACAATGGATGATAGTTCTTCAACC 1878 Query 2227 TGTTCTAATGACTCGATTCA-ATCAGGGGTAGCCAATGGGTCATACAAAGGGAATGTATT 2285 ||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||| | Sbjct 1879 TGTTCTAATGACTTGATA-AGATCAGGGGTAGCCAATGGGTCATACAAAGGGAATGTAGT 1937 Query 2286 AAATTGCCAAAGCCAAAAGTGGTTTAGCAATGGAAAAATACAACCAGGAAAAGTATCTGA 2345 ||||||||||||||| |||||| || ||||||||||| ||||||||||||||||||||| Sbjct 1938 AAATTGCCAAAGCCAGAAGTGGCATATCAATGGAAAAACACAACCAGGAAAAGTATCTGA 1997 Query 2346 TTCCAACAGTTTAGCCAGTGAAAAAGAGCATCAACCTTCAAGACTTGCATCTGACCCTAA 2405 | ||| |||||||||||||||||||||| ||||||||||||||| ||| ||||||||||| Sbjct 1998 TGCCAGCAGTTTAGCCAGTGAAAAAGAGGATCAACCTTCAAGACCTGCGTCTGACCCTAA 2057 Query 2406 AAATCAGAGCCATTCTTCTGATATACGCAGAGTTGGTGAAGCTGACATAGTTATCTCCCA 2465 ||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||| Sbjct 2058 AAATCAGAGCCATTCTTCTGAGAAACGCAGAGTTGGTGAAGCTGATGCGGTTATCTCCCA 2117 Query 2466 CATTCAAAAACCAGAGAGCCCTAAGGAACGTAGTCCTGTTAGCAAGGATCCCAACATGAT 2525 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 2118 CATTCAAAAACCAGAGAGCCCGGGGGAACGTAGTCCTGTTAGCAAGGATCCCAACATGAT 2177 Query 2526 TCAGATGAAAGAGAAAAGTGCTGCGGTACTTTCCCCATCCAGAGCTGCTCCTTGGAATCC 2585 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 2178 TCAGATGAAAGAGAAAACTGCTGCGGTACTTTCCCCATCCAGAGCTGCTCCTTGGAATCC 2237 Query 2586 TCCGTCTCCAGTGCAAGCAAAACCGGAGAAAAAGGGTGTTTCAAATGTAGAGGCGGTTCC 2645 ||| |||| ||||||||||||||||||||||| || ||||||||||||||| || ||||| Sbjct 2238 TCCATCTCTAGTGCAAGCAAAACCGGAGAAAACGGTTGTTTCAAATGTAGATGCTGTTCC 2297 Query 2646 AAACAGGAAAGTCAT-ATCTGTTAAATCACCTTCATCACATCATGCATCACCATCTCGTG 2704 |||||||||||| | ||||| || ||||||||||||| |||| |||||||||||||||| Sbjct 2298 AAACAGGAAAGT-AGCATCTGCTAGATCACCTTCATCAGATCAAGCATCACCATCTCGTG 2356 Query 2705 A-AGCTCAGTTGCAAACAGTGGGTCCTAGAGCTGATATACAGAAAATCGCTTCTCCGAAA 2763 | | || |||||||||| ||||||| |||||||||||||||||||| || |||||| ||| Sbjct 2357 AGA-CTAAGTTGCAAACTGTGGGTCTTAGAGCTGATATACAGAAAACCGTTTCTCCAAAA 2415 Query 2764 CCTGTGGAACAACCAGCACCTCCTATGTCAAGGCCTTTGAGTGCTCCTATAATCCCTCCA 2823 || |||| ||||||||||||| |||| ||||||||||||||||||||||||||||| ||| Sbjct 2416 CCGGTGGCACAACCAGCACCTTCTATCTCAAGGCCTTTGAGTGCTCCTATAATCCCCCCA 2475 Query 2824 ACGCAAGCTGCACCTGTAATATCTGCTGTTCAAAC--C-TCGACTGCGTCCCTTGCTCGT 2880 | ||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||| Sbjct 2476 AAGCAAGCTGCACCTGTAATATCTGCTGTTCAAACAACCTCGGCTGCGTCCCTTGCTCGT 2535 Query 2881 TCAATGAGCTCAACAGGGCGTTTAGGTTCACCGACACATAGCCAAGCTTACAATCCTCAA 2940 ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| Sbjct 2536 TCAATGAGCTCAACAGGCCGTTTAGGTTCACCGATACATAGCCAAGCTTACAATCCTCAA 2595 Query 2941 TCCTACAAACATGCCATAGTGGGTTCATCTGGTTTCACCCACCCAAGCTCTCAATCGA-G 2999 ||||| ||||||||||||||||| |||||||||||||||||| ||||| ||||||| | | Sbjct 2596 TCCTATAAACATGCCATAGTGGGATCATCTGGTTTCACCCACTCAAGCACTCAATCAACG 2655 Query 3000 TGGAACAAGCACATTGCCGCCTTATTCACATCCGTCTCCTATCTCAGTATCAAATCAGTC 3059 |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 2656 -GGAACAAGCACATTGCCGCCTTATTCACATCCGTCTCCTATCTCAGTATCAAGTCAGTC 2714 Query 3060 TGGTTTCCCTATCAATGTTGGCTCTTGGGATGTTTCTTCTGGTGGGCTATTGTGGACCGG 3119 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 2715 TGGTTTCCCTATCAATGTTGGCTCTTGGGATGTTTCTTCTGGTGGGCTCTTGTGGACCGG 2774 Query 3120 TGGTTCGAGTTCAACCAGAGATACAACAACAACCATCAGCGGGAATCACAAAACAAACAC 3179 |||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct 2775 TGGTTCGAGTTCAAACAGAGATACAACAACAACCATCAGCGGGAATCATAAAACGAACAC 2834 Query 3180 TTACAACGCACCCGTAGTAACTACCAGCATCAGGCCTACTAATGTTCAGATAGGGAGAAC 3239 ||||||| | ||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct 2835 TTACAACACCCCCGTAGTAACTACCAGCATCAGGCCTACTAATGTCCAGATTGGGAGAAC 2894 Query 3240 GGCACAGAGTCTGATGACCGATGAGTTCCCTCACCTTGATATCATCAATGATCTGCTTGC 3299 ||| |||| | || |||||||||||||||||||||||||||||||||||||||||| Sbjct 2895 GGCGCAGA-T--GA---CCGATGAGTTCCCTCACCTTGATATCATCAATGATCTGCTTGA 2948 Query 3300 AGACGAACACGGTACAATGGATAATAGCGTATACCGTGTACCACAACAGTTCAACAACCA 3359 ||||||||||||| ||||||| | ||| ||||||| |||||||||||||||||||||||| Sbjct 2949 AGACGAACACGGTTCAATGGACAGTAGTGTATACCATGTACCACAACAGTTCAACAACCA 3008 Query 3360 GTACTCATATCATGGCGGTGCGGATCTCGGGATCTCTAGCAGGTCTAGGAGTTACAGTGA 3419 ||||||||| ||||| ||||| ||||||||||||||| |||||||||||||||||||||| Sbjct 3009 GTACTCATACCATGGTGGTGCTGATCTCGGGATCTCTGGCAGGTCTAGGAGTTACAGTGA 3068 Query 3420 TGATGGATTTCACCAGTCTTACGGTGAATACATGCCACATTCTGCTTCTTCCTCGCCATA 3479 |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct 3069 TGATGGATTTCACCAGTCTTACGGTGAATACATGCCACATTCTGGTTCTTCTTCGCCATA 3128 Query 3480 TGGTAATGGGCAAACACAATCGCAATGGCAGATGGCAAATATGGATTTCTCTTTACCGGC 3539 ||||||||| |||||||||||||||||||||||||||| | ||| || ||||||| ||| Sbjct 3129 TGGTAATGGACAAACACAATCGCAATGGCAGATGGCAA-T--GGACTTGTCTTTACGGGC 3185 Query 3540 TATGAGGAACCAAGACGATGTATCAGCATCAGCAACAGCTACTTACTCTTACTTTGATTT 3599 |||||||||||||||||||| |||||||||||| ||||||||||||||||||||| Sbjct 3186 TATGAGGAACCAAGACGATGCATCAGCATCAGC------TACTTACTCTTACTTTGATTT 3239 Query 3600 AGATTCATCAAACCCGAATTTGTCTGGAATCAACGGCTATAGGGACTTCAGGCCATCGAA 3659 |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct 3240 AGATTCATCAAACCCGAACTTGTCTGGAATCAACGGCTATAGAGACTTCAGGCCATCGAA 3299 Query 3660 CGGACACTGAG--G-TTTGGGTTTAAAGAGTGGCATTGCATTGTAATGTTTATTATATAA 3716 |||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 3300 CGGACACTGAATAGCTTTGGGTTTAAGGAGTGGCATTGCATTGTAATGTTTATTATATAA 3359 Query 3717 AGATGGAAAGCAAAAAACATTTGTGTAAAGAGAGTTTTCGTCCTCTTCGTTTCAAATGAA 3776 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3360 AGATGGAAAGCAAAAAACATTTGTGTAAAGAGAGTTTTCGTCCTCTTCGTTTCAAATGAA 3419 Query 3777 TCCTTTTTT 3785 || |||||| Sbjct 3420 TCTTTTTTT 3428 > Ahg470409 jgi|Araly1|470409|fgenesh2_kg.1__363__AT1G04300.3 Length=3532 Score = 1363 bits (738), Expect = 0.0 Identities = 1593/1989 (80%), Gaps = 126/1989 (6%) Strand=Plus/Plus Query 543 ATCACTGGAAGAGAATTCAAATGGACAAAGA-AGTCAATCAGAAGAAGCAATCGCTGAGT 601 |||| | || |||| ||| ||||||| || | |||||| ||| ||||||| || |||||| Sbjct 209 ATCAGTAGAGGAGAGTTCTAATGGAC-AACACAGTCAAGCAGGAGAAGCACTCTCTGAGT 267 Query 602 GGCGTTCTTCTGAACAAGTTGAGAATGGAACTCCTTCTACATC-TCCACCGTATTGGGAC 660 |||| ||||||| ||||| ||||| || ||||| ||||| || || || || ||||| Sbjct 268 GGCGGTCTTCTGGTCAAGTAGAGAACGGGACTCCATCTACGTCGCCCTCC-TACTGGGAT 326 Query 661 ATCGATGATGATGACGATTTTGGATC-AAAACCATCTCAACTATTTGGGAAAA-ATACTT 718 |||||||| ||||| |||| ||| | ||||| ||| | ||||| |||||| |||||| Sbjct 327 ATCGATGAGGATGATGATTATGG-CCTTAAACCCTCTGAGTTATTT-GGAAAATATACTT 384 Query 719 GGACGATT-GAGAAATTTTCAGATATCAACAAACGAGAGC-TCCGCGGCGATGTTTTTGA 776 ||| |||| | ||||||||||| ||||| ||| | |||| | || ||||| |||||| Sbjct 385 GGAAGATTCCA-AAATTTTCAGAAATCAATAAAAGGGAGCAT-CGTAGCGATAATTTTGA 442 Query 777 AGTC-GGGGGTTACAAATGGTATATATTAATTTATCCACAAGGGTGTGATGTTTGCAACC 835 || | || || |||||||||||||| ||||||||||||||||| |||||||||| || | Sbjct 443 AG-CTGGCGGCTACAAATGGTATATTTTAATTTATCCACAAGGATGTGATGTTTTTAATC 501 Query 836 ATCTCTCTTTGTTTCTATGTGTTGCACACCATG--AAA--------A-G--C--TT-CT- 878 ||||||| |||||||| ||||||||| || ||| ||| | | | || || Sbjct 502 ATCTCTCCTTGTTTCTCTGTGTTGCAAACTATGATAAACTTCTTCCAGGTTCTTTTGCTA 561 Query 879 TC-------CAGGCTGGAGTCATTTTGCTCAGTTTACTATAGCTGTGTCGAATAAAGATC 931 || |||||||||||||||| ||||||||||||||| |||||| |||||||||| Sbjct 562 TCTTGGAGGCAGGCTGGAGTCATTTCGCTCAGTTTACTATATCTGTGTTGAATAAAGATA 621 Query 932 CGAAGAAGTCAAAGCATTCAGATACGTTACACCGGTTTTGGAAGAAAGAGCATGATTGGG 991 ||||| | ||| ||||||||| | ||||||||||||||||||||||||||||||| Sbjct 622 TAAAGAAAACGAAGTTTTCAGATACACTGCACCGGTTTTGGAAGAAAGAGCATGATTGGG 681 Query 992 GTTGGAAGAAA-TTTATTGAGTTACCTAAATTGAAGGAAGGGTTTATAGATGATTCTGGT 1050 | ||||| ||| ||||| ||||||||||| || ||||| ||||| |||||||||||||| Sbjct 682 GATGGAA-AAAGTTTATGGAGTTACCTAAGTTAAAGGACGGGTTCATAGATGATTCTGGC 740 Query 1051 TGTCTTACAATTAAAGCTCAAGTGCAGGTGATCAGAGAGAGAGTGGACCGACCTTTTCGC 1110 |||||||||||| | |||||||| ||||||||||||||||| |||||| ||||||||||| Sbjct 741 TGTCTTACAATTGAGGCTCAAGTTCAGGTGATCAGAGAGAGGGTGGACAGACCTTTTCGC 800 Query 1111 TGCCTTCATTATAAATATAGGGAG-GAACTTGTTAGGGTGTATTTGGGAAATGTAGAGCA 1169 |||||| ||| || |||| |||| ||||||||||||||||||||| |||||| || || Sbjct 801 TGCCTTGATTGTAGTTATA-GGAGAGAACTTGTTAGGGTGTATTTGCCAAATGTGGATCA 859 Query 1170 AATTTGCTGGCGGTTTGTGGAAGAGAAAAGAAGCAAGCTTGGTAGGTTGATAGAGGACAA 1229 || |||| |||| ||||| ||||||| |||||||||||| || ||||||||||||||||| Sbjct 860 AAATTGCCGGCGTTTTGTTGAAGAGAGAAGAAGCAAGCTCGGGAGGTTGATAGAGGACAA 919 Query 1230 GGCAAAATGGAAAAGCTTCTGTGCTTTCTGGATGGGGTTGGACCAAAATTCAAGGCGTCG 1289 ||||| ||||| |||||| ||| ||||||| | ||| |||||||||| || |||||||| Sbjct 920 GGCAAGATGGACTAGCTTCGGTGTTTTCTGGTTAGGGATGGACCAAAACTCTAGGCGTCG 979 Query 1290 AATGTCCCGAGAGAAAATGGATGTGATTCTAAAAATAGTTGTAAAACACTTCTTT-GTCG 1348 ||||| ||||||||||||| || || |||||| ||||||||||||||| ||| || | Sbjct 980 GATGTCTAGAGAGAAAATGGACGTAATCCTAAAAGGAGTTGTAAAACACTT-TTTCGTAG 1038 Query 1349 AGAAGGAAGTTACATCTACTTTGGTGATGGATTCCTTGTATAGTGGATTGAAGGCTCTTG 1408 | || ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1039 AAAAAGAAGTTACATCCACTTTGGTGATGGATTCCTTGTATAGTGGGTTGAAGGCTCTTG 1098 Query 1409 AAGGCCAAAATAAGAACAAGGAGAG-TAGGCCGAGACTAATGGATACTGAA-GAA-TCCA 1465 ||||||||| ||||||| | || || |||||| ||||| | ||| | || ||| | | Sbjct 1099 AAGGCCAAACTAAGAAC-ACGAAAGATAGGCCAAGACTGTTAGATGC-CAAGGAATTGC- 1155 Query 1466 CAGCTCCAATTGTTAGCGTGGACAAAGAT-TCGTTTGCATTAGTTGATGATGTGTTATTA 1524 ||||||||||||| |||||||| |||||| | ||| | |||||||||||||||| | ||| Sbjct 1156 CAGCTCCAATTGTAAGCGTGGAAAAAGATAT-GTTCGTATTAGTTGATGATGTGCTGTTA 1214 Query 1525 CTCTTAGAGAAG-GCTGCTCTGGAGCCATTGCCTAAAAAAGAGGA-AAAGAGTTCTCAAA 1582 ||| ||||| || |||||||| |||||||||||| ||||||||| |||| || | || | Sbjct 1215 CTCCTAGAG-AGAGCTGCTCTTGAGCCATTGCCTCCAAAAGAGGAGAAAG-GTCCCCAGA 1272 Query 1583 ACCGTACGAAGGATGGGAATGCTGGAGAGGAATTC-AGTAGAGAAGCCGT-TGAGCGTGA 1640 ||||||| |||||||| |||| |||||| || || | || |||||| | |||||||| Sbjct 1273 ACCGTACAAAGGATGGCAATGATGGAGAAGAGGTCAACAAG-GAAGCC-TACGAGCGTGA 1330 Query 1641 TGATAGGCGTTTAACTGAATTGGGTAGACGGACTGTGGAGATATTTGTTCTTGCACATAT 1700 ||| || ||||||||||| ||||||||||| |||||||| |||||||||||||| ||||| Sbjct 1331 TGAGAGACGTTTAACTGAGTTGGGTAGACGAACTGTGGAAATATTTGTTCTTGCCCATAT 1390 Query 1701 CTTCAGCAACAAAATTGAAGTTGCATACCAAGAAGCTATTGC-ATGGAAAAGGCAAGAAG 1759 |||||||| ||||| || |||||||| ||||||||||| || | |||||||| |||| Sbjct 1391 CTTCAGCAGTAAAATCGAGGTTGCATATCAAGAAGCTATCGCGCT-AAAAAGGCAGGAAG 1449 Query 1760 AACTTATTCGTGAAGAAGAGGAAGCGTGGCTGGCAGAAAGCGAACAGAAGGG-Caaaaga 1818 ||||||||||||| ||||||||||||||| ||||||||| ||||||| |||| ||||| | Sbjct 1450 AACTTATTCGTGAGGAAGAGGAAGCGTGGTTGGCAGAAACCGAACAG-AGGGCCAAAAAA 1508 Query 1819 ggagcatctgaaaaagagaagaaatctaagaagaaacaggcgaaacagaaaaagaacaaa 1878 |||||| | || | ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1509 GGAGCAGCCGAGAGAGAGAAGAAATCTAAGAAGAAACAGGCGAAACAGAAACGGAACAAA 1568 Query 1879 aacaaaggaaagga-aatgaggaaag-aagacaaggtgagaa---c--c-ca--aacag- 1927 || ||||| ||||| || || |||| |||| |||||||| | | || || || Sbjct 1569 AATAAAGGGAAGGACAAA-AG-AAAGGAAGAAAAGGTGAGCTTTGCATCACATGAAAAGG 1626 Query 1928 a-----ag-aaagggaaaTTGA-GA--AAGA---GGAATGTGTGA-GAGCGATAGCAGAA 1974 | || ||| ||| || || |||| ||| | ||| | | | || |||| | Sbjct 1627 ATCTCGAGGAAAACCAAAACGATGAGGAAGAAAAGGATTCTGTCACG-GAGAAAGCACAC 1685 Query 1975 TCGTCAGCTGAAAAACCTGACACACTTGGAGATGTCTCTGACGTGTCTGATTCAGTAGAT 2034 || ||||||||||| ||||| || ||||||||||| || ||| | |||||||| || ||| Sbjct 1686 TCTTCAGCTGAAAAGCCTGATACTCTTGGAGATGTGTCCGACATATCTGATTCTGTGGAT 1745 Query 2035 AGTTCAGCTGAAATACTTCAGCTTGATTCAGAAGATAGAGAGAGTAGTCCTGTTCATTGG 2094 |||| ||||| || |||||| ||||| ||||||||| || |||||| ||||||||||| Sbjct 1746 GGTTCGGCTGACATTGTTCAGCCTGATTTAGAAGATAGGGATAGTAGTTCTGTTCATTGG 1805 Query 2095 GAAA-TGGATGCCTCAGAGGTTCATCCTCCTTC-TGCAGGAGACA-CTAGCAGAGGAAGA 2151 || | || | |||| || ||||| || | || | |||||| | | || ||||||||| Sbjct 1806 GATACTG-ACGCCTTGGAAATTCATGCTGCATCAT-CAGGAGGGAGC-AGTAGAGGAAGA 1862 Query 2152 GGCAATTCTTTTTCTATACCTAATGGAGTTGCAGAAAGAAAGGGTCTGTCCACAATGGAT 2211 |||| | | || |||||| |||||||||||||| ||| |||||| |||||| Sbjct 1863 GGCA---CA----C----CC-AATGGAATTGCAGAAAGAAAGAGTCAGTCCACTATGGAT 1910 Query 2212 GATAGTTCTTCAACCTGTTCTAATGACTCGATTCAATCAGGGGTAGCCAATGGGTCATAC 2271 |||||||||||||| ||||||||||| || || | || |||||| |||||||||| ||| Sbjct 1911 GATAGTTCTTCAACTTGTTCTAATGATTCTATCCGGTCGGGGGTAACCAATGGGTCCTAC 1970 Query 2272 AAAGGGAATGTATTAAATTGCC-AAAGCCAAAAGTGGTTTAGCA-ATGGAAA-AATACAA 2328 ||||||||| || |||| || ||| || |||| | | || | ||||| ||| ||| Sbjct 1971 CAAGGGAATGCCTTGAATTTCCGAAA-CCGGAAGTCGCCGAACAGA-GGAAAGAAT-CAA 2027 Query 2329 CCAGGAAAAG---TATCTGATTCCAACAGTTTAGCCAGTGAAAAAGA-GCATCAACCTTC 2384 | || ||||| |||||||| || ||||||||| ||||||| ||| | |||||||||| Sbjct 2028 CAAGTAAAAGCAATATCTGATGCCCACAGTTTAGGGAGTGAAACAGATG-ATCAACCTTC 2086 Query 2385 AAGACTTGC-ATCTGACCCTAAAAA-TCAGAGCCATTCTTCTGATATACGCAGA-GTTGG 2441 || ||||| | | ||||| ||| | ||||| ||||||| || | ||| | ||||| Sbjct 2087 AACACTTGGGA-CAGACCC-AAAGAGTCAGAATTATTCTTCCGAGGCAAGCA-ACGTTGG 2143 Query 2442 TGAAGCTGA 2450 |||| |||| Sbjct 2144 TGAATCTGA 2152 > Ahg358775 jgi|Araly1|358775|fgenesh1_pg.C_scaffold_8002562 Length=951 Score = 1094 bits (592), Expect = 0.0 Identities = 708/761 (93%), Gaps = 20/761 (3%) Strand=Plus/Plus Query 2916 ACATAGCCAAGCTTACAATCCTCAATCCTACAAACATGCCATAGTGGGTTCATCTGGTTT 2975 |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct 204 ACATAGCCAAGCTTACAATCCTCAATCCTATAAACATGCCATAGTGGGTTTATCTGGTTT 263 Query 2976 CACCCACCCAAGCTCTCAATCGA-GTGGAACAAGCACATTGCCGCCTTATTCACATCCGT 3034 ||||||| ||||| ||||||| | | |||||||||||||||||||||||||||||||||| Sbjct 264 CACCCACTCAAGCACTCAATCAACG-GGAACAAGCACATTGCCGCCTTATTCACATCCGT 322 Query 3035 CTCCTATCTCAGTATCAAATCAGTCTGGTTTCCCTATCAATGTTGGCTCTTGGGATGTTT 3094 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 323 CTCCTATCTCAGTATCAAGTCAGTCTGGTTTCCCTATCAATGTTGGCTCTTGGGATGTTT 382 Query 3095 CTTCTGGTGGGCTATTGTGGACCGGTGGTTCGAGTTCAACCAGAGATACAACAACAACCA 3154 ||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||| Sbjct 383 CTTCTGGTGGGCTCTTGTGGACCGGTGGTTCGAGTTCAAACAGAGAT---ACAACAACCA 439 Query 3155 TCAGCGGGAATCACAAAACAAACACTTACAACGCACCCGTAGTAACTACCAGCATCAGGC 3214 ||||||||||||| ||||| |||||||||||| | ||||||||||||||||||||||||| Sbjct 440 TCAGCGGGAATCATAAAACGAACACTTACAACACCCCCGTAGTAACTACCAGCATCAGGC 499 Query 3215 CTACTAATGTTCAGATAGGGAGAACGGCACAGAGTCTGATGACCGATGAGTTCCCTCACC 3274 |||||||||| ||||| |||||||||| | | | ||||||||||||||||||||||| Sbjct 500 CTACTAATGTCCAGATTGGGAGAACGG--C---G-CAGATGACCGATGAGTTCCCTCACC 553 Query 3275 TTGATATCATCAATGATCTGCTTGCAGACGAACACGGTACAATGGATAATAGCGTATACC 3334 |||||||||||||||||||||||| ||||||||||||| ||||||| | ||| ||||||| Sbjct 554 TTGATATCATCAATGATCTGCTTGAAGACGAACACGGTTCAATGGACAGTAGTGTATACC 613 Query 3335 GTGTACCACAACAGTTCAACAACCAGTACTCATATCATGGCGGTGCGGATCTCGGGATCT 3394 ||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||| Sbjct 614 ATGTACCACAACAGTTCAACAACCAGTACTCATACCATGGTGGTGCTGATCTCGGGATCT 673 Query 3395 CTAGCAGGTCTAGGAGTTACAGTGATGATGGATTTCACCAGTCTTACGGTGAATACATGC 3454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 674 CTGGCAGGTCTAGGAGTTACAGTGATGATGGATTTCACCAGTCTTACGGTGAATACATGC 733 Query 3455 CACATTCTGCTTCTTCCTCGCCATATGGTAATGGGCAAACACAATCGCAATGGCAGATGG 3514 |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| Sbjct 734 CACATTCTGCTTCTTCTTCGCCATATGGTAATGGACAAACACAATCGCAATGGCAGATGG 793 Query 3515 CAAATATGGATTTCTCTTTACCGGCTATGAGGAACCAAGACGATGTATCAGCATCAGCA- 3573 ||| | ||| || ||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct 794 CAA-T--GGACTTGTCTTTACGGGCTATGAGGAACCAAGACGATGCATCAGCATCAGCAT 850 Query 3574 -A-CA---GCTACTTACTCTTACTTTGATTTAGATTCATCAAACCCGAATTTGTCTGGAA 3628 | || ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 851 CAGCATCAGCTACTTACTCTTACTTTGATTTAGATTCATCAAACCCGAACTTGTCTGGAA 910 Query 3629 TCAACGGCTATAGGGACTTCAGGCCATCGAACGGACACTGA 3669 ||||||||||||| ||||||||||||||||||||||||||| Sbjct 911 TCAACGGCTATAGAGACTTCAGGCCATCGAACGGACACTGA 951 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 143172589626 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5