BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G43950.1
Length=1953
Score E
Sequences producing significant alignments: (Bits) Value
Ahg494605 jgi|Araly1|494605|fgenesh2_kg.8__421__AT5G43950.1 2791 0.0
Ahg333729 jgi|Araly1|333729|fgenesh1_pg.C_scaffold_1000294 865 0.0
> Ahg494605 jgi|Araly1|494605|fgenesh2_kg.8__421__AT5G43950.1
Length=1898
Score = 2791 bits (1511), Expect = 0.0
Identities = 1774/1898 (93%), Gaps = 29/1898 (2%)
Strand=Plus/Plus
Query 1 TGGTTTCGCGAAGCATCGTATGAATCTTTCAGAGAGACAGAGGGAATGTTTGGATGCAAA 60
|||||||||||||||||| ||| ||| ||||||| ||||||||||||||||||||||||
Sbjct 1 TGGTTTCGCGAAGCATCGGATG-ATC--TCAGAGACACAGAGGGAATGTTTGGATGCAAA 57
Query 61 TGTCTGTATTGGAACAATCTCAAAGAA-TATCCGCCATTGAAGGAACCTGAAACCTTCTC 119
|||||||||||||||||||||| |||| || || ||||||||||||||||||||||||||
Sbjct 58 TGTCTGTATTGGAACAATCTCAGAGAATTA-CCTCCATTGAAGGAACCTGAAACCTTCTC 116
Query 120 TCTCCCTGCTTCTCTTCCCCAGTGGCCTTCAGGTCAAGGCTTTGGTTTAGGAAGAATCAA 179
||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 117 TCTCCCTGCTTCTATTCCCCAGTGGCCTTCAGGTCAAGGCTTTGGTTCAGGAAGAATCAA 176
Query 180 TCTAGGCGAATTAGAAGTCGCAGAGATCACAAGTTTTGAATTCGTATGGCGATACTGCTC 239
||| || || |||||| |||| ||| |||||||||||||||| |||||||||||||||||
Sbjct 177 TCTTGGTGATTTAGAACTCGCCGAGGTCACAAGTTTTGAATTTGTATGGCGATACTGCTC 236
Query 240 TCGTCGAGATAACAAGAAGAGTGTTTCCTTCTACAAACCTGACAAATTACCT-GAAGATT 298
||||||||| ||||||||||||||||||||||||||||| ||||||||| || |||||||
Sbjct 237 TCGTCGAGACAACAAGAAGAGTGTTTCCTTCTACAAACCGGACAAATTA-CTCGAAGATT 295
Query 299 TCCATTGCTTAGGTCATTACTGTCAGTCTGATTCTCACCTCTTGAGAGGTTTTCTTCTTG 358
||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 296 TCCATTGTTTAGGTCATTACTGTCAGTCTGATTCTCATCTCTTGAGAGGTTTCCTTCTTG 355
Query 359 TAGCAAGACAAGTTAATAAGTCTTCAGAGCCTGCACTTGTGCAACCACTCGATTATACAT 418
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 356 TAGCAAGACAAGTTAATAAGTCTTCAGAGCCTGCACTTGTGCAACCACTTGATTATACAT 415
Query 419 TGGTCTGGAGCTCAAATGATTTATCAGAA-GAGCGTCAAAGCGAATCGTACGGTTACTTC 477
||||||||||||||||||| ||||||||| || | || | || | ||||||||||
Sbjct 416 TGGTCTGGAGCTCAAATGACTTATCAGAAGGATC-TC--A---AA--G--CGGTTACTTC 465
Query 478 TGGTTACCGCAGCCTCCTCAAGGGTATAAACCGATCGGATATTTGGTTACAACGAGTCCC 537
||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct 466 TGGCTACCGCAGCCTCCTCAAGGGTATAAAACGATCGGATTTTTGGTTACAACGAGTCCC 525
Query 538 GCGAAACCTGAATTGGATCAAGTTCGATGCGTTCGAGCTGATCTAACCGATAAGTGTGAA 597
||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct 526 TCGAAACCAGAATTGGATCAAGTTAGATGCGTTCGAGCTGATCTAACCGATAAATGTGAA 585
Query 598 GCACATAAAGTCATAATCACCGCAATATCGGATTCTTTAAGCATTCCTATGTTTATATGG 657
|||||||||||||| ||||| || |||||| ||||||||||||||||| |||||||||||
Sbjct 586 GCACATAAAGTCATCATCACTGCTATATCGAATTCTTTAAGCATTCCTTTGTTTATATGG 645
Query 658 AAAACAAGACCATCCGACCGCGGAATGCGTGGCAAAGGAGTCTCAACAGGTACATTCTTC 717
|||||||||| ||||||||||||||| | |||||||||||| |||||||||||||||||
Sbjct 646 CAAACAAGACCTTCCGACCGCGGAATGTGGGGCAAAGGAGTCCCAACAGGTACATTCTTC 705
Query 718 TGCACAACTCAATCCCCTGAAGAAGATCATCTCAGTACAATCGCGTGTCTAAAAAACCTC 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 706 TGCACAACTCAATCCCCTGAAGAAGATCATCTCAGTACAATCGCGTGTCTAAAAAACCTC 765
Query 778 GATTCGAGTTTACACGCAATGCCAAACATCGAACAAATCCATGCTATGATTCAACACTAT 837
||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||
Sbjct 766 GATTCGAGTTTACACGCAATGCCAAACATTGATCAAATCCATGCTTTGATTCAACACTAT 825
Query 838 GGTCCAAGAGTTTACTTCCATCCTAATGAAGTCTACCTACCTTCTTCAGTCTCATGGTTC 897
||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||
Sbjct 826 GGTCCAAGAGTTTACTTCCATCCTAATGAAGTCTATCTATCTTCTTCCGTCTCATGGTTC 885
Query 898 TTCAAAAACGGTGCACTCTTATGCAGCAATTCAAATTCCTCTGTTATCAACAATGAACCT 957
||||||||||||||| ||||||||||||| ||||||||||||| |||||| ||||||
Sbjct 886 TTCAAAAACGGTGCAGTCTTATGCAGCAACTCAAATTCCTCTGATATCAA---TGAACCC 942
Query 958 ATAGACGAAACCGGCTCGAATCTACCTCATGGCGGAACCAACGATAAGCGATATTGGATC 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 943 ATAGACGAAACCGGCTCGAATCTACCTCATGGCGGAACCAACGATAAGCGATATTGGATC 1002
Query 1018 GATTTACCGATCAACGATCAACAAAGACGCGAATTCATCAAACGAGGCGATCTCGAGAGC 1077
||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| |||
Sbjct 1003 GATTTACCGATAAACGATCAACAAAGACGCGAATTCCTCAAACGAGGCAATCTCGAAAGC 1062
Query 1078 TCGAAGCTTTACGTTCACGTTAAGCCAGCATTTGGAGGAACGTTTACGGATCTTGCGTTT 1137
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 1063 TCGAAGCTTTACGTTCACGTTAAGCCAGCATTTGGAGGAACGTTCACTGATCTTGCGTTT 1122
Query 1138 TGGATTTTTTGTCCGTTCAACGGACCAGCGACTCTGAAGCTAGGGCTTATGGATCTCTCG 1197
|||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||
Sbjct 1123 TGGATTTTTTGTCCGTTCAACGGACCAGCGACTCTGAAACTAGGGCTCATGAATCTCTCG 1182
Query 1198 TTGGCTAAAACTGGTCAACACGTTTGTGATTGGGAACATTTCACAGTCAGAATCAGTAAT 1257
|| ||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||
Sbjct 1183 TTAGCTAAAACTGGTCAACATGTTTGTGATTGGGAACATTTCACACTCAGAATCAGCAAT 1242
Query 1258 TTCTCCGGCGAGCTTTACTCTATTTACTTCTCTCAACACAGTGGCGGCGAGTGGATCAAA 1317
|||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||
Sbjct 1243 TTCTCCGGCGAGCTTTACTCGATTTACTTCTCACAACACAGTGGCGGCGAATGGATCAAA 1302
Query 1318 CCTGAAAATCTTGAATTCGTTGAAGGAAGTAACAAAGCTGTGGTGTACTCGTCGAAGAAT 1377
||| || ||||||| ||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct 1303 CCTCAAGATCTTGAGTTCGTTGAAGGAAGTAACAAAGCTGTGGTTTACTCGTCGAAGCAT 1362
Query 1378 GGTCACGCGAGCTTTTCTAAGTCTGGAATGTATTTACAAGGATCTGCTTTGCTTGGAATT 1437
||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct 1363 GGTCACGCGAGCTTTTCTAAGTCTGGATTGTATTTACAAGGATCTGATTTGCTTGGAATT 1422
Query 1438 GGGATTAGGAATGATTCAGCGAAGA-GTGATTTGTTTGTTGATTCGAGTTTGAAGTATGA 1496
||||| ||||||||| |||||| || | ||||||||||||||||||||||||| ||||||
Sbjct 1423 GGGATAAGGAATGATACAGCGA-GAAGCGATTTGTTTGTTGATTCGAGTTTGAGGTATGA 1481
Query 1497 GATTGTTGCGGCGGAGTATCTCAGAGGAGCGGTGGTGGAGCCGCCGTGGTTAGGTTATAT 1556
|||||| |||||||||||||| |||| ||||||||||| ||||||||||||||||||||
Sbjct 1482 GATTGTGGCGGCGGAGTATCTTGGAGGTGCGGTGGTGGAACCGCCGTGGTTAGGTTATAT 1541
Query 1557 GAGAGAGTGGGGACCGAAGATTGTGTATAATTCGAGATCGGAGATTGAGAAGTTGAATGA 1616
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1542 GAGAGAGTGGGGACCGAAGATTGTGTATAATTCGAGAACGGAGATTGAGAAGTTGAATGA 1601
Query 1617 ACGATTGCCATGGAGGTTGAGATCTTGGGTTGATGCTGTGTTGAGGAAGATTCCGGTAGA 1676
| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||
Sbjct 1602 AAGATTGCCATGGAGGATGAGAACTTGGGTTGATGCTGTGTTGAGGAAGATTCCGGTGGA 1661
Query 1677 ATTATCCGGCGAGGAAGGACCGACGGGACCTAAGGAGAAGAATAATTGGTTTGGTGATGA 1736
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1662 ATTATCCGGCGAGGAAGGACCGACGGGACCAAAGGAGAAGAATAATTGGTTTGGTGATGA 1721
Query 1737 GAGGTGGTGATATTTTTGTAATGGGCTTGCGATATCTGATATATGGGCCTGTAATATTTT 1796
||| ||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||
Sbjct 1722 GAGATGGTGATATTTTTGTAATGGGCTTGAGATATTTGATATATGGGCCTGGAATATTTT 1781
Query 1797 ATTTCCCAGGCCCATAACTTCA-TGACCCACCAGAAACCTATTCATGTGTCCTAT-GTTC 1854
||||| |||||||||||||| | |||| || || |||||||||| ||||||||| ||||
Sbjct 1782 ATTTCTCAGGCCCATAACTT-AGTGACACAGCA-AAACCTATTCGTGTGTCCTACAGTTC 1839
Query 1855 TTCTCTTCGCTATATGATTCGTG-TTACAGTGAAGTGA 1891
||||||||||||||||||||||| || |||||||||||
Sbjct 1840 TTCTCTTCGCTATATGATTCGTGATT-CAGTGAAGTGA 1876
> Ahg333729 jgi|Araly1|333729|fgenesh1_pg.C_scaffold_1000294
Length=3987
Score = 865 bits (468), Expect = 0.0
Identities = 1362/1776 (77%), Gaps = 132/1776 (7%)
Strand=Plus/Plus
Query 46 ATGTTTGGATGCAAATGTCTGTATTGGAACAATCTCAAAGAATAT-CCGCCATTGAAGGA 104
||||| || | ||||||||| | ||||||||||| | || || | |||||||| |||||
Sbjct 2269 ATGTTAGGTTACAAATGTCTCCACTGGAACAATCTTATAG-ATTTACCGCCATTAAAGGA 2327
Query 105 ACCTGAAACCTTCTCTCTCCCTGCTTCTC-TTCCCCAGTGGCCTTCAGGTCAAGGCTTTG 163
||||||||||||||||| |||||||| | ||||||| |||||| |||||||||||||||
Sbjct 2328 CCCTGAAACCTTCTCTCTTCCTGCTTC-CATTCCCCATTGGCCTCCAGGTCAAGGCTTTG 2386
Query 164 G-TTTAGGAAGAATCAATCTAGGCGAATTAGAAGTC-GCAGAGATCACAAG-TTTTGAAT 220
| | | |||| ||||||||| ||| ||||| ||||| || | ||||| | ||||||||
Sbjct 2387 GCTCT-GGAACAATCAATCTCGGCAAATTACAAGTCATCA-AAATCAC-GGATTTTGAAT 2443
Query 221 TCGTATGGCGATACTGCTCTCGTCGAGATAACAAGAAGAGTGTTTCCTTCTACAAACC-- 278
| ||||||||||| | || | | ||| || || ||||| |||| |||||||||||
Sbjct 2444 TTATATGGCGATACAGATC-C-AC-AGAGAAGAACAAGAGCATTTCATTCTACAAACCAA 2500
Query 279 TGACA-AATTACCTGAAGATTTCCATTGCTTAGGTCATTACTGTCAGTCTGATTCTCA-C 336
| | || ||| |||| |||||||||||||||||||||||||| ||||||||||| |
Sbjct 2501 AGGGATTGTTTCCTAAAGACTTCCATTGCTTAGGTCATTACTGTCAATCTGATTCTCATC 2560
Query 337 CTCTTGAGAGGTTTTCTTCTTGTAGCAAGACAAGTTAATA-AGTC-TT----C----AGA 386
|| |||||||||| |||||||| |||||| | ||| || | || || | |||
Sbjct 2561 CT-TTGAGAGGTTATCTTCTTGCGGCAAGA-GATTTAGTAGATTCATTAGAACAGGAAGA 2618
Query 387 G---CCTGCACTT-GTGCAACCACTCGATTATACAT-TGGTCTGGAGCTCAAATGATT-- 439
| |||||| || ||| |||| | |||| ||| | | |||||||||||||||||||
Sbjct 2619 GAAACCTGCA-TTAGTGGAACCTGTTGATTTTAC-TCTTGTCTGGAGCTCAAATGATTCA 2676
Query 440 -T--ATCA-GAA-G-AG-CGTCAA-AGCGAATCGTACGGTTACTTCTGGTTACCGCAGCC 491
| | | ||| | || || || |||||| || ||||||||||||||||||||||||
Sbjct 2677 GTAGAAGATGAATGTAGTAGT-AAGAGCGAA-CG--CGGTTACTTCTGGTTACCGCAGCC 2732
Query 492 TCCTCAAGGGTATAAACCGATCGGATATT-TGGTTACAACGAGTCCCGCGAAACCTGAAT 550
|||| ||||||||| | ||||||| | || ||||||||| |||| | | ||||||||| |
Sbjct 2733 TCCTGAAGGGTATAGATCGATCGGTT-TTGTGGTTACAAAGAGTTCTGTGAAACCTGAGT 2791
Query 551 TGGATCAAGTTCGATGCGTTCGAGCTGATCTAACCGATAAGTGTGAAGCACATAAAGTCA 610
|| || ||||| |||| ||| |||||||||| || ||||| |||||| | || || ||||
Sbjct 2792 TGAATGAAGTTAGATGTGTTAGAGCTGATCTTACTGATAAATGTGAAACCCACAATGTCA 2851
Query 611 TAATCACCGCAATATCGGATTCTTTAAGCATTCCTATGTTTATATGGAAAACAAGACCAT 670
| |||| || | ||||| |||||| | ||||| |||||||||||| ||| | || |
Sbjct 2852 TTGTCACTGCTGTTTCGGAATCTTTAGGTGTTCCTTTGTTTATATGGAGAACTCGGCCTT 2911
Query 671 CCGACCGCGGAATGCGTGGCAAAGGAGTCTCAACAGGTACATTCTTCTGCACAACTCAA- 729
| |||||||| ||| | |||| ||| ||||| ||||||| |||||||||| |||||
Sbjct 2912 CAGACCGCGGCATGTGGGGCAGAGGTGTCTCTGCAGGTACTTTCTTCTGCAGAACTCGGC 2971
Query 730 TCC--CCTG--A-AGAAGATCATCTCAGTA-CA--ATCGCGTGTCTAAAAAACCTCGATT 781
| |||| | ||||||| || | ||| | || || |||||||| || || |||
Sbjct 2972 TTGTTCCTGCTAGAGAAGAT-AT-TG-GTATCGGTATTGCTTGTCTAAAGAATCTAGATA 3028
Query 782 CGAGTTTACACGCAATGCCAAACATCGAACAAATCCATGCTATGATTCAACACTATGGTC 841
||| | ||||||| |||||||| | || || || || ||| ||||||||||||||||||
Sbjct 3029 CGAATGTACACGCGATGCCAAATGTTGATCAGATTCAAGCTTTGATTCAACACTATGGTC 3088
Query 842 CAAGAGTT-TACTTCCATCCTAATGAAGTCT-ACCTACCTTCTTCAGTCTCATGGTTCTT 899
| | | | | |||||||||| |||| || || |||||||||| || || ||||||||
Sbjct 3089 CTACACTAGT-CTTCCATCCTGGTGAAA-CTTACTTACCTTCTTCTGTTTCGTGGTTCTT 3146
Query 900 CAAAAACGGTGCA-CTCTTATGC-AGCAATTCAAATTCCTCTGTTATCAACAATGAACCT 957
||| || |||||| |||| ||| || || |||| || | ||| | ||||| |
Sbjct 3147 CAAGAATGGTGCAGCTCTC-TGCGAG-AAGGGAAAT-CC---G--ATCGA---TGAACTT 3195
Query 958 AT-AGACGAAACCGGCTCGAATCTACCTCATGGCGGAACCAACGATAAGC-GATATTGGA 1015
|| | | |||| ||||||||| | ||||| || |||| ||| || |||| | | |||||
Sbjct 3196 ATCA-ATGAAAATGGCTCGAATTTGCCTCAAGGAGGAAGCAATGACAAGCAGTT-TTGGA 3253
Query 1016 TCGATTTACCGA-TCAACGATCAACAAAGACGCGAATTCATCAAACGAGGCGATCTCGAG 1074
| ||||| ||| | | |||||||||||| | | ||| |||| ||||| | || ||
Sbjct 3254 TTGATTTGCCGTGTGAT-GATCAACAAAGA-G--ATTTCGTCAAGCGAGGAAACCTTGAA 3309
Query 1075 AGCTCGAAGCTTTACGTTCACGTTAAGCCAGCAT-TTGGAGGAACGTTTACGGATCTTG- 1132
|| ||||| |||||| ||||| ||||||| || | ||||||||||||| ||||||||||
Sbjct 3310 AGTTCGAAACTTTACATTCACATTAAGCCTGC-TCTTGGAGGAACGTTCACGGATCTTGT 3368
Query 1133 CGTTTTGGATTTTTTGTCCGTTCAACGGACCAGCGACTCTGAAG-CTAGGGCTTATGGAT 1191
| | ||||| || ||||| || || ||||||||||| || || ||||| ||| | |||
Sbjct 3369 C-TACTGGATCTTCTGTCCTTTTAATGGACCAGCGAC-CTTAAAACTAGGACTTGTCGAT 3426
Query 1192 CTCTCGTTGGCTAAA-A-CTGGTCAACACGTTTGTGATTGGGAACATTTCACAGTCAGAA 1249
|||| ||| | | | | || |||||||| |||||||||||||||||||| || |||
Sbjct 3427 GTCTCATTGA-TCAGCATC-GGCCAACACGTCTGTGATTGGGAACATTTCACTCTCCGAA 3484
Query 1250 TCAGTAATTTCTCCGGCGAGCTTTACTCTATTTACTTCTCTCAACACAGTGGCGGCGAGT 1309
|||| |||||||| || ||||||||||| || |||||||| |||||||||||||||||||
Sbjct 3485 TCAGCAATTTCTCAGGTGAGCTTTACTCAATCTACTTCTCACAACACAGTGGCGGCGAGT 3544
Query 1310 GGATCAAACCTGAAAATCTTGAATTCGTTGAAGGAAGTAACAAAGCTGTGGTGTACTCGT 1369
||||| || || | | ||||||||| || ||||| |||||||| || || |||||||
Sbjct 3545 GGATCGAAGCTTATGACCTTGAATTCATTCCCGGAAGCAACAAAGCCGTTGTTTACTCGT 3604
Query 1370 CGAAGA-ATGGTCACGCGAGCTTTTCTAAGTCTGGAA-TGTATTTACAAGGATCTG-CTT 1426
|||| | ||||||||||||||||| ||||| |||| | | || ||||| ||||| | |
Sbjct 3605 CGAA-ACATGGTCACGCGAGCTTTCCTAAGGCTGGGACT-TACTTACAGGGATC-GACAA 3661
Query 1427 TGCTTGGAATTGGGATTAGGAATGATTCAGCGAAG-AGTGATTTGTTTGTTGATTCGAGT 1485
||||||| |||||||| || || || | || | | ||||| | || || ||||||||
Sbjct 3662 TGCTTGGGATTGGGATAAGAAACGACACTGC-ACGTAGTGAAGTCTTCGTAGATTCGAGC 3720
Query 1486 TTGAAG-TATGAGATTGTTGCGGCGGAGTATCTCAGAGG-AGCGGTG-G-TGG-AG--CC 1538
| | | || ||||| |||| || |||||||| | || | ||||| | ||| || ||
Sbjct 3721 TC-ACGGTACGAGATCATTGCAGCAGAGTATCTGGGCGGCAACGGTGTGGTGGCAGAACC 3779
Query 1539 GCCGTGGTT--AGGTTATATGAGAGAGTGGGGACCGAAGATTGTGTATAATTCGAGATCG 1596
||| ||| | || | |||||||||| |||||||| ||| |||| || |||| ||| |
Sbjct 3780 GCCATGGCTGCAG-T-ATATGAGAGAATGGGGACCAAAGGTTGTCTACGATTCAAGAGAG 3837
Query 1597 GAGATTGAGAAG-TTGAATGAA-CGATTGCC-ATGGA-GGTT-GAGATCTTGGGTTGATG 1651
||||| || ||| ||| |||| ||||| || | ||| |||| | | | || | ||| |
Sbjct 3838 GAGATAGA-AAGATTGG-TGAATCGATTTCCGA-GGACGGTTAGGG-T-TTCGCTTGCTA 3892
Query 1652 CTGTGTTGAGGAAGA-TTCCGGTAGAATTATCCGGCGAGGAAGGACCGACGGGACCTAAG 1710
| ||| |||| || | ||||||| |||||||||||||||||||| || |||||||| |||
Sbjct 3893 CAGTGCTGAGAAA-ACTTCCGGTGGAATTATCCGGCGAGGAAGGTCCAACGGGACCGAAG 3951
Query 1711 GAGAAGAATAATTGGTTTGGTGATGAGAGGTGGTGA 1746
|||||||| ||||||| ||| ||||| || ||||||
Sbjct 3952 GAGAAGAACAATTGGTATGGCGATGAAAGATGGTGA 3987
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 73399902115
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5