BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G44340.1
Length=1689
Score E
Sequences producing significant alignments: (Bits) Value
Ahg948687 jgi|Araly1|948687|scaffold_800574.1 2292 0.0
Ahg492797 jgi|Araly1|492797|fgenesh2_kg.7__2230__AT4G20890.1 1528 0.0
Ahg489245 jgi|Araly1|489245|fgenesh2_kg.6__2379__AT5G23860.1 1175 0.0
Ahg476725 jgi|Araly1|476725|fgenesh2_kg.2__1855__AT1G75780.1 1057 0.0
> Ahg948687 jgi|Araly1|948687|scaffold_800574.1
Length=1380
Score = 2292 bits (1241), Expect = 0.0
Identities = 1323/1364 (97%), Gaps = 0/1364 (0%)
Strand=Plus/Plus
Query 83 GACGAAGAAACCaaaaaaaaaaaaaaTGAGAGAGATCCTTCATATCCAAGGCGGTCAATG 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GACGAAGAAACCAAAAAAAAAAAAAATGAGAGAGATCCTTCATATCCAAGGCGGTCAATG 60
Query 143 TGGAAACCAGATCGGAGCAAAGTTCTGGGAAGTGATCTGCGACGAACACGGCATTGATCA 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 TGGAAACCAGATCGGAGCAAAGTTCTGGGAAGTGATCTGCGACGAACACGGCATTGATCA 120
Query 203 CACCGGTCAATACGTCGGCGATTCTCCGTTACAGCTTGAACGTATCGATGTCTATTTCAA 262
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 121 CACCGGTCAATACGTCGGCGATTCTCCGTTACAGCTTGAACGTATCGATGTGTATTTCAA 180
Query 263 CGAAGCTAGCGGTGGAAAGTACGTTCCTCGCGCTGTTCTTATGGATCTGGAGCCTGGTAC 322
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 181 CGAAGCTAGCGGTGGAAAGTACGTTCCTCGTGCTGTTCTTATGGATCTGGAGCCTGGTAC 240
Query 323 CATGGATTCTCTCAGATCTGGTCCGTTCGGTCAGATTTTCCGTCCTGATAACTTCGTCTT 382
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 241 TATGGATTCTCTCAGATCTGGTCCGTTTGGTCAGATTTTCCGTCCTGATAACTTCGTCTT 300
Query 383 TGGTCAATCTGGTGCCGGAAATAACTGGGCGAAAGGTCATTACACCGAAGGTGCTGAGTT 442
||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 301 TGGTCAATCCGGTGCCGGGAATAACTGGGCGAAAGGTCATTACACCGAAGGTGCTGAGTT 360
Query 443 GATTGATTCTGTTCTCGATGTTGTGAGGAAGGAAGCTGAGAACAGCGATTGTCTTCAAGG 502
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 GATTGATTCTGTTCTTGATGTTGTGAGGAAGGAAGCTGAGAACAGCGATTGTCTTCAAGG 420
Query 503 TTTCCAAGTGTGTCATTCATTGGGAGGAGGAACTGGATCTGGAATGGGAACTCTATTGAT 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 421 TTTCCAAGTGTGTCATTCATTGGGAGGAGGAACTGGATCTGGAATGGGAACTCTATTGAT 480
Query 563 TTCTAAGATAAGAGAAGAGTATCCAGATCGTATGATGATGACTTTCTCAGTGTTTCCTTC 622
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 481 TTCTAAGATAAGAGAAGAGTATCCAGATCGTATGATGATGACTTTTTCAGTGTTTCCTTC 540
Query 623 TCCTAAGGTCTCTGACACTGTTGTTGAGCCATACAATGCAACTCTCTCTGTGCATCAGCT 682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 TCCTAAGGTCTCTGACACTGTTGTTGAGCCATACAATGCAACTCTCTCTGTGCATCAGCT 600
Query 683 TGTCGAAAACGCTGACGAGTGTATGGTTTTGGACAATGAGGCTCTCTACGATATCTGTTT 742
||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 601 TGTTGAAAACGCTGACGAGTGTATGGTTTTGGATAATGAGGCTCTTTACGATATCTGTTT 660
Query 743 CCGTACCCTCAAGCTCGCTAATCCTACCTTTGGTGATCTTAACCATCTCATCTCTGCTAC 802
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 CCGTACCCTCAAGCTTGCTAATCCTACCTTTGGTGATCTTAACCATCTCATCTCTGCTAC 720
Query 803 AATGAGTGGTGTCACTTGCTGTCTTCGTTTCCCTGGCCAGCTTAACTCTGACCTTAGGAA 862
|||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||
Sbjct 721 AATGAGTGGTGTTACGTGCTGTCTTCGTTTCCCTGGTCAGCTTAACTCTGACCTTAGGAA 780
Query 863 ACTCGCTGTGAACCTTATCCCATTCCCAAGGCTTCACTTCTTCATGGTTGGTTTCGCACC 922
|| |||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 781 GCTTGCTGTGAATCTTATCCCGTTCCCAAGGCTTCACTTCTTCATGGTTGGTTTCGCTCC 840
Query 923 ATTGACATCGAGAGGATCACAGCAATACAGTGCCTTGAGTGTTCCTGAACTGACCCAGCA 982
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 841 ATTGACATCGAGAGGATCGCAGCAATACAGTGCCTTGAGTGTTCCTGAACTGACCCAGCA 900
Query 983 GATGTGGGATGCAAAGAACATGATGTGTGCTGCTGACCCTCGTCATGGACGTTACTTGAC 1042
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 901 GATGTGGGATGCGAAGAACATGATGTGTGCTGCTGACCCTCGCCATGGACGTTACTTGAC 960
Query 1043 TGCATCCGCTGTGTTCCGTGGAAAGCTGAGCACCAAAGAGGTTGACGAGCAGATGATGAA 1102
||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||
Sbjct 961 TGCATCCGCTGTGTTCCGTGGTAAGCTGAGCACGAAAGAGGTTGATGAGCAGATGATGAA 1020
Query 1103 CATTCAGAACAAGAACTCATCCTACTTTGTGGAATGGATCCCAAACAACGTCAAGTCCAG 1162
||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 1021 CATTCAGAACAAGAACTCATCGTACTTTGTGGAATGGATCCCGAACAACGTCAAGTCCAG 1080
Query 1163 TGTCTGTGATATTGCACCAAAGGGTTTGAAAATGGCGTCTACTTTCATTGGTAACTCAAC 1222
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 1081 TGTCTGTGATATTGCACCAAAGGGTTTGAAAATGGCATCGACTTTCATTGGTAACTCAAC 1140
Query 1223 CTCAATCCAGGAGATGTTTAGGCGTGTGAGCGAACAGTTCACAGCTATGTTCAGGAGAAA 1282
||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 1141 CTCGATCCAGGAGATGTTCAGGCGTGTGAGTGAACAGTTCACAGCTATGTTCAGGAGAAA 1200
Query 1283 GGCTTTCCTTCATTGGTACACAGGAGAAGGCATGGACGAGATGGAGTTCACTGAAGCAGA 1342
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 1201 GGCTTTCCTTCATTGGTACACAGGAGAAGGTATGGACGAGATGGAGTTCACCGAAGCAGA 1260
Query 1343 GAGTAACATGAATGATCTTGTCGCAGAGTACCAGCAGTACCAAGATGCTACAGCCGGAGA 1402
||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 1261 GAGTAACATGAATGATCTTGTCGCAGAGTACCAACAGTACCAAGATGCTACAGCTGGAGA 1320
Query 1403 GGAAGAGTACGAGGAGGAAGAAGAGGAGTACGAGACTTAAGATG 1446
|| |||||||||||||||||||||||||| ||| |||||||||
Sbjct 1321 AGAGGAGTACGAGGAGGAAGAAGAGGAGTATGAGGCTTAAGATG 1364
> Ahg492797 jgi|Araly1|492797|fgenesh2_kg.7__2230__AT4G20890.1
Length=1656
Score = 1528 bits (827), Expect = 0.0
Identities = 1166/1331 (88%), Gaps = 18/1331 (1%)
Strand=Plus/Plus
Query 105 aaaaTGAGAGAGATCCTTCATATCCAAGGCGGTCAATGTGGAAACCAGATCGGAGCAAAG 164
||||||||||| ||||||||||| ||||| ||||| |||||||||||||||||||| |||
Sbjct 105 AAAATGAGAGAAATCCTTCATATTCAAGGAGGTCAGTGTGGAAACCAGATCGGAGCTAAG 164
Query 165 TTCTGGGAAGTGATCTGCGACGAACACGGCATTGATCACACCGGTCAAT-ACGTCGGCGA 223
||||||||||| || |||| ||| || || || |||||||||||||| | | || |||||
Sbjct 165 TTCTGGGAAGTTATTTGCGGCGAGCATGGTATCGATCACACCGGTCAGTCATGT-GGCGA 223
Query 224 TTCTCCG-T-TACAGCTTGAACGTATCGATGTCTATTTCAACGAAGCTAGCGGTGG-AAA 280
| | | ||||||||||| | ||| |||||||||| |||||||||||||| || |||
Sbjct 224 --AACAGATCTACAGCTTGAAAGGATCAATGTCTATTTTAACGAAGCTAGCGGAGGCAAA 281
Query 281 GTACGTTCCTCGCGCTGTTCTTATGGATCTGGAGCCTGGTACCATGGATTCTCTCAGATC 340
|||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct 282 -TACGTTCCTCGCGCTGTTCTTATGGATCTGGAGCCTGGAACTATGGATTCTCTCAGATC 340
Query 341 TGGTCCGTTCGGTCAGATTTTCCGTCCTGATAACTTCGTCTTTGGTCAATCTGGTGCCGG 400
|| ||||| |||||||||||||| || ||||||||||| ||||| || |||||||| ||
Sbjct 341 CGGGCCGTTTGGTCAGATTTTCCGGCCGGATAACTTCGTGTTTGGGCAGTCTGGTGCTGG 400
Query 401 AAATAACTGGGCGAAAGGTCATTACACCGAAGGTGCTGAGTTGATTGATTCTGTTCTCGA 460
|||||||||||||||||||| ||||| || || || ||||||||||||||||| || ||
Sbjct 401 GAATAACTGGGCGAAAGGTCACTACACGGAGGGAGCGGAGTTGATTGATTCTGTGCTTGA 460
Query 461 TGTTGTGAGGAAGGAAGCTGAGAACAGCGATTGTCTTCAAGGTTTCCAAGTGTGTCATTC 520
||||||||||||||||||||||||| | ||||||||||||||||| ||||| ||||||||
Sbjct 461 TGTTGTGAGGAAGGAAGCTGAGAACTGTGATTGTCTTCAAGGTTTTCAAGTTTGTCATTC 520
Query 521 ATTGGGAGGAGGAACTGGATCTGGAATGGGAACTC-TATTGATTTCTAAGATAAGAGAAG 579
||||||||||||||||| ||||| |||||||| | | || ||||||||||||||||| |
Sbjct 521 GTTGGGAGGAGGAACTGGTTCTGGCATGGGAACACTTCTT-ATTTCTAAGATAAGAGAGG 579
Query 580 AGTATCCAGATCGTATGATGATGA-CTTTCTCAGTGTTT-CCTTCTCCTAAGGTCTCTGA 637
| |||||||||||||||||||||| |||| || || ||| |||||||||||||| |||||
Sbjct 580 AATATCCAGATCGTATGATGATGACCTTT-TCGGT-TTTCCCTTCTCCTAAGGTTTCTGA 637
Query 638 CACTGTTGTTGAGCCATACAATGCAACTCTCTCTGTGCATCAGCTTGTCGAAAACGCTGA 697
||||| ||||||||||||||||| || || ||||| || |||||||| || || |||||
Sbjct 638 TACTGTGGTTGAGCCATACAATGCTACACTTTCTGTTCACCAGCTTGTTGAGAATGCTGA 697
Query 698 CGAGTGTATGGTTTTGGACAATGAGGCTCTCTACGATATCTGTTTCCGTACCCTCAAGCT 757
|| |||||||||||||| ||||| ||||| ||||||||||||||||||||| | |||||
Sbjct 698 TGAATGTATGGTTTTGGATAATGAAGCTCTTTACGATATCTGTTTCCGTACCTTGAAGCT 757
Query 758 CGCTAATCCTACCTTTGGTGATCTTAACCATCTCATCTCTGCTACAATGAGTGGTGTCAC 817
||||||||||| |||||||| |||||||| |||||||| ||||||||||||||||| ||
Sbjct 758 TGCTAATCCTACATTTGGTGACCTTAACCACCTCATCTCAGCTACAATGAGTGGTGTTAC 817
Query 818 TTGCTGTCTTCGTTTCCCTGGCCAGCTTAACTCTGACCTTAGGAAACTCGCTGTGAACCT 877
||||||||||| |||||||| || || ||||| |||||||| ||||| |||||||||||
Sbjct 818 ATGCTGTCTTCGGTTCCCTGGTCAACTAAACTCCGACCTTAGAAAACTTGCTGTGAACCT 877
Query 878 TATCCCATTCCCAAGGCTTCACTTCTTCATGGTTGGTTTCGCACCATTGACATCGAGAGG 937
||| || |||||| | || |||||||||||||||||||| |||||||||||||| |||||
Sbjct 878 TATTCCTTTCCCACGACTCCACTTCTTCATGGTTGGTTTTGCACCATTGACATCAAGAGG 937
Query 938 ATCACAGCAATACAGTGCCTTGAGTGTTCCTGAACTGACCCAGCAGATGTGGGATG-CAA 996
||| || |||||||||||||||||||| ||||| || || || ||||||||||||| |||
Sbjct 938 ATCTCAACAATACAGTGCCTTGAGTGTCCCTGAGCTAACTCAACAGATGTGGGATGCCAA 997
Query 997 AGAACATGATGTGTGCTGCTGA-CCCTCGTCATGGACGTTACTTGACTGCATCCGCTGTG 1055
| |||||||||||||| ||||| ||| |||||||| ||||||||||| || || ||||||
Sbjct 998 A-AACATGATGTGTGCAGCTGATCCC-CGTCATGGTCGTTACTTGACAGCTTCTGCTGTG 1055
Query 1056 TTCCGTGGAAAGCTGAGCACCAAAGAGGTTGACGAGCAGATGATGAACATTCAGAACAAG 1115
|||||||||||| |||| || ||||||||||| || |||||||||||| | ||||||||
Sbjct 1056 TTCCGTGGAAAGATGAGTACTAAAGAGGTTGATGAACAGATGATGAACGTCCAGAACAAA 1115
Query 1116 AACTCATCCTACTTTGTGGAATGGATCCCAAACAACGTCAAGTCCAGTGTCTGTGATATT 1175
|| || || |||||||| |||||||| ||||||||||| || || || |||||||||||
Sbjct 1116 AATTCTTCATACTTTGTTGAATGGATTCCAAACAACGTGAAATCAAGCGTCTGTGATATA 1175
Query 1176 GCACCAAAGGGTTTGAAAATGGCGTCTACTTTCATTGGTAACTCAACCTCAATCCAGGAG 1235
|| || | ||||||||||||| | || ||||||||||| |||||||| |||||||||||
Sbjct 1176 GCTCCCACGGGTTTGAAAATGTCATCAACTTTCATTGGAAACTCAACTTCAATCCAGGAA 1235
Query 1236 ATGTTTAGGCGTGTGAGCGAACAGTTCACAGCTATGTTCAGGAGAAAGGCTTTCCTTCAT 1295
||||| ||||||||||| |||||||||||||| |||||||||||||| ||||||||||||
Sbjct 1236 ATGTTCAGGCGTGTGAGTGAACAGTTCACAGCCATGTTCAGGAGAAAAGCTTTCCTTCAT 1295
Query 1296 TGGTACACAGGAGAAGGCATGGACGAGATGGAGTTCACTGAAGCAGAGAGTAACATGAAT 1355
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1296 TGGTACACAGGAGAAGGAATGGACGAGATGGAGTTCACTGAAGCAGAGAGTAACATGAAT 1355
Query 1356 GATCTTGTCGCAGAGTACCAGCAGTACCAAGATGCTACAGCCGGAGAGGAAGAGTACGAG 1415
||||| || |||||||| ||||| || ||||||||||||| ||| || || ||||| |||
Sbjct 1356 GATCTGGTTGCAGAGTATCAGCAATATCAAGATGCTACAGTCGGTGAAGAGGAGTATGAG 1415
Query 1416 GAGGAAGAAGA 1426
||||| |||||
Sbjct 1416 GAGGACGAAGA 1426
> Ahg489245 jgi|Araly1|489245|fgenesh2_kg.6__2379__AT5G23860.1
Length=1614
Score = 1175 bits (636), Expect = 0.0
Identities = 1115/1344 (83%), Gaps = 41/1344 (3%)
Strand=Plus/Plus
Query 105 aaaaTGAGAGAGATCCTTCATATCCAAGGCGGTCAATGTGGAAACCAGATCGGAGCAAAG 164
|||||| | ||||| ||||| || ||||| |||||||||||||||||||||||||| |||
Sbjct 50 AAAATGCGTGAGATTCTTCACATTCAAGGTGGTCAATGTGGAAACCAGATCGGAGCTAAG 109
Query 165 TTCTGGGAAGTGA-TCTGCGACGAACACGGCATTGA-TCACACCGGTCA-ATACGTCGGC 221
||||||||||| | | |||| ||| ||||| || || || | ||| | |||| ||
Sbjct 110 TTCTGGGAAGT-AGTATGCGCCGAGCACGGGATCGATTC-GA-CGGGAAGATACCAAGGA 166
Query 222 GATTCTCCG--TTACAGCTTGAACGTA-TCGATGTCTATTTCAACGAAGCTAGCGGTGGA 278
|| || || || || ||||| | || ||||||| | ||||||||| || | ||
Sbjct 167 GA--GAACGATTTGCAACTCGAACG-AGTCAATGTCTACTACAACGAAGCGAGTTGCGG- 222
Query 279 AAG-TACGTTCCTCGCGCTGTTCTTATGGATCTGGAGCCTGGTACCATGGATTCTCTCAG 337
||| | ||| || ||||| || || ||||||||||||||||| || |||||| | ||||
Sbjct 223 AAGATTCGTCCCACGCGCCGTCCTCATGGATCTGGAGCCTGGGACTATGGATAGTGTCAG 282
Query 338 ATCTGGTCCGTTCGGTCAGATTTTCCGTCCTGATAACTTCGTCTTTGGTCAATCTGGTGC 397
||| ||||||| ||||||||| |||||||||||||||||||||||||||||||| || ||
Sbjct 283 ATCCGGTCCGTACGGTCAGATCTTCCGTCCTGATAACTTCGTCTTTGGTCAATCCGGCGC 342
Query 398 CGGAAATAACTGGGCGAAAGGTCATTACACCGAAGGTGCTG-AGTTGATTGATTCTGTTC 456
||| || || ||||| ||||| |||||||| |||||||||| | || || ||||| ||||
Sbjct 343 CGGTAACAATTGGGCTAAAGGACATTACACTGAAGGTGCTGAACTT-ATCGATTCCGTTC 401
Query 457 TCGATGTTGTGAGGAAGGAAGCTGAGAACAGCGATTGTCTT-CAAGGTTTCCAAGTGTGT 515
|||||||||| | |||||||||||||| | || || ||| ||||| ||||||||||||
Sbjct 402 TCGATGTTGTTCGTAAGGAAGCTGAGAATTGTGACTG-CTTGCAAGGATTCCAAGTGTGT 460
Query 516 CATTCATTGGGAGGAGGAACTGGATCTGGAATGGGAACTCTATTGATTTCTAAGATAAGA 575
|| |||||||||||||||||||||||||||||||||||| | ||||| || ||||| ||
Sbjct 461 CACTCATTGGGAGGAGGAACTGGATCTGGAATGGGAACTTTGTTGATATCAAAGATTAGG 520
Query 576 GAAGAGTATCCAGATCGTATGATGATGACTTTCTCAGTGTTTCCTTCTCCTAAGGTCTCT 635
||||||||||||||| | |||||| ||||||| || |||||||| ||||| || || ||
Sbjct 521 GAAGAGTATCCAGATAGGATGATGCTGACTTTTTCGGTGTTTCCATCTCCGAAAGTGTCA 580
Query 636 GACACTGTTGTTGAGCCATACAATGCAACTCTCTCTGTGCATCAGCTTGTCGAAAACGCT 695
||||||||||||||||| |||||||||||||||||||| ||||||||||| || || ||
Sbjct 581 GACACTGTTGTTGAGCCTTACAATGCAACTCTCTCTGTTCATCAGCTTGTTGAGAATGCA 640
Query 696 GACGAGTGTATGGTT-TTGGACAATGAGGCTCTCTACGATATCTGTTTCCGTACCCTCAA 754
|| |||||||||||| || |||||||| ||||| || || || || ||| | || || ||
Sbjct 641 GATGAGTGTATGGTTCTT-GACAATGAAGCTCTTTATGACATTTGCTTCAGAACTCTTAA 699
Query 755 GCTCGCTAATCCTACCTTTGGTGATCTT-AACCATCTCATCTCTGCTACAATGAGTGGTG 813
|||| | | ||||| |||||| || ||| || |||||||||||||| || ||||||||||
Sbjct 700 GCTCACCACTCCTAGCTTTGGAGA-CTTGAATCATCTCATCTCTGCAACCATGAGTGGTG 758
Query 814 TCACTTGCTGTCTTCGTTTCCCTGGCCAGCTTAACTCTGACCTTAGGAAACTCGCTGTGA 873
||||||||||||| |||||||| || ||||||||||||||||| | || || || ||||
Sbjct 759 TCACTTGCTGTCTCCGTTTCCCGGGTCAGCTTAACTCTGACCTGCGTAAGCTTGCAGTGA 818
Query 874 ACCTT-ATCCCATTCCCAAGGCTTCACTTCTTCATGGTT-GGTTTCGCACC-ATTGACAT 930
| ||| ||||||||||| | || ||||||||||||||| ||||| ||||| || ||||
Sbjct 819 A-CTTGATCCCATTCCCTCGTCTCCACTTCTTCATGGTTGGGTTT-GCACCGCTT-ACAT 875
Query 931 CGAGAGGATCACAGCAATACAGTGCCTTGAGTGTTCCTGAACTGACCCAGCAGATGTGGG 990
| | ||||||||||||||||| || || | ||||||||| || ||||| ||||||||||
Sbjct 876 CTCGTGGATCACAGCAATACAGAGCGTTAACTGTTCCTGAGCTCACCCAACAGATGTGGG 935
Query 991 ATGCAAAGAACATGATGTGTGCTGCTGACCCTCGTCATGGAC-GTTACTTGACTGCATCC 1049
|||| ||||||||||||||||| ||||| || ||||| || | | |||||||| || ||
Sbjct 936 ATGCCAAGAACATGATGTGTGCAGCTGATCCGCGTCACGG-CAGGTACTTGACAGCCTCA 994
Query 1050 GCTGTGTTCCGTGG-AAAGCTGAGCACCAAAGAGGTTGACGAGCAGATGATGAACATTCA 1108
|| ||||| | || ||| ||||||||||||| |||||||| |||||||| ||| ||||
Sbjct 995 GCCATGTTCAGAGGCAAA-ATGAGCACCAAAGAAGTTGACGAACAGATGATCAACGTTCA 1053
Query 1109 GAACAAGAACTCATCCTACTTTGTGGAATGGATCCCAAACAACGTCAAGTCCAGTGTCTG 1168
||||||||||||||| |||||||||||||||||||||||||| || || || | || ||
Sbjct 1054 GAACAAGAACTCATCTTACTTTGTGGAATGGATCCCAAACAATGTGAAATCAACCGTGTG 1113
Query 1169 TGATATTGCACCAAAGGGTTTGAAAATGGCGTCTACTTTCATTGGTAACTCAACCTCAAT 1228
||| ||| |||||| |||| |||||||||| || |||||||| || ||||| || || ||
Sbjct 1114 TGACATTCCACCAACGGGTCTGAAAATGGCTTCGACTTTCATCGGGAACTCGACTTCGAT 1173
Query 1229 CCAGGAGATGTTTAGGCGTGTGAGCGAACAGTTCACAGCTATGTTCAGGAGAAAGGCTTT 1288
||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||
Sbjct 1174 CCAGGAGATGTTTAGGCGTGTGAGCGAACAGTTCACAGCGATGTTCAGAAGAAAAGCTTT 1233
Query 1289 CCTT-CATTGGTACACAGGAGAAGGCATGGACGAGATGGAGTTCACTGAAGCAGAGAGTA 1347
| || |||||||||||||| ||||| |||||||||||||||||||| || |||||||| |
Sbjct 1234 C-TTGCATTGGTACACAGGTGAAGGAATGGACGAGATGGAGTTCACAGAGGCAGAGAGCA 1292
Query 1348 ACATGAATGATCTTG-TCGCAGAGTACCAGCAGTACCAAGATGCTACAGCCGGA-GAGGA 1405
||||||| ||| ||| | ||||||| || ||||||||||| || || || | | |||||
Sbjct 1293 ACATGAACGAT-TTGGTATCAGAGTATCAACAGTACCAAGACGCAACCGCTG-ATGAGGA 1350
Query 1406 AGA-G--TACGAGGAGGAAGAAGA 1426
||| | || ||| | ||||||||
Sbjct 1351 AGAAGGGTATGAGTATGAAGAAGA 1374
> Ahg476725 jgi|Araly1|476725|fgenesh2_kg.2__1855__AT1G75780.1
Length=1573
Score = 1057 bits (572), Expect = 0.0
Identities = 1096/1346 (81%), Gaps = 48/1346 (4%)
Strand=Plus/Plus
Query 108 ATGAGAGAGATCCTTCATATCCAAGGCGGTCAATGTGGAAACCAGATCGG-AGCAAAGTT 166
||||||||||||||||| | |||||||||||||| || ||||| ||||| |||| ||
Sbjct 13 ATGAGAGAGATCCTTCACGTTCAAGGCGGTCAATGCGGTAACCAAATCGGTTCCAAA-TT 71
Query 167 CTGGGAAGTGATCTGCGACGAACACGGCATTGATCACACCGGTCAATACGTCGGCGATT- 225
||||||||| |||||||||||||||||| |||||| |||||| | ||| ||| ||||
Sbjct 72 CTGGGAAGTTATCTGCGACGAACACGGCGTTGATCCCACCGGACGTTACAACGGTGATTC 131
Query 226 CTCCG-T-TACAGCTTGAACGTATCGATGTCTATTTCAACGAAGCTAGC-GGTGGAAAG- 281
| ||| | | ||||| || |||||| | || |||| ||| |||||| | ||||| ||
Sbjct 132 CGCCGATCTCCAGCTCGAGCGTATCAACGTTTATTACAATGAAGCT-TCTGGTGG-TAGA 189
Query 282 TACGTTCCTCGCGCTGTTCTTATGGATCTGGAGCCTGGTACCATGGATTCTCTCAGATCT 341
||||||||||| ||||||||||||||||| ||||||||||| |||||| | ||||||||
Sbjct 190 TACGTTCCTCGTGCTGTTCTTATGGATCTCGAGCCTGGTACTATGGATAGTATCAGATCT 249
Query 342 GGTCCGTTCGGTCAGATTTTCCGTCCTGATAACTTCGTCTTTGGTCAATCTGGTGCCGGA 401
||||| | |||||||||||||||||||||||||||||||||||| ||||| || ||||||
Sbjct 250 GGTCCCTACGGTCAGATTTTCCGTCCTGATAACTTCGTCTTTGGGCAATCCGGCGCCGGA 309
Query 402 AATAACTGGGCGAAAGGTCATTACACCGAAGGTGCTGAG-TTGATTGATTCTGTTCTCGA 460
||||| ||||| |||||||||||||| |||||||||||| || || ||| ||||||||||
Sbjct 310 AATAATTGGGCCAAAGGTCATTACACGGAAGGTGCTGAGCTT-ATCGATGCTGTTCTCGA 368
Query 461 TGTTGTGAGGAAGGAAGCTGAGAACAGCGATTGTCTTCAAGG-TTTCCAAGTGTGTCA-T 518
|||||| | || |||||||||||| | ||||| |||||||| |||| |||| ||||| |
Sbjct 369 TGTTGTTCGTAAAGAAGCTGAGAACTGTGATTGCCTTCAAGGCTTTC-AAGTATGTCACT 427
Query 519 -TCATTGGGAGGAGGAACTGGATCTGGAATGGGAACTCTATTGATTTCTAAGATAAGAGA 577
|| |||| |||||| || || ||||||||||||||||| ||||| || ||||| | ||
Sbjct 428 CTC-TTGG-AGGAGGCACAGGTTCTGGAATGGGAACTCTTTTGATATCAAAGATCCGTGA 485
Query 578 AGAGTATCCAGATC-GTATGATGATGACTTTCTCAGTGTTTCCT-TCTCCTAAGGTCTCT 635
||||| ||||| | | |||||| | || ||||| || ||||| ||||| ||||||||
Sbjct 486 GGAGTACCCAGA-CAGGATGATGCTCACATTCTCTGT-TTTCCCATCTCCAAAGGTCTCA 543
Query 636 GACACTGTTGTTGAGCCATACAATGCAACTCTCTCTGTGCATCAGCTTGTCGAAAACGCT 695
|||||||| ||||| || || |||||||||||||| || || ||||| || || ||||||
Sbjct 544 GACACTGTCGTTGAACCGTATAATGCAACTCTCTCAGTCCACCAGCTAGTAGAGAACGCT 603
Query 696 GACGAGTGTATGGTT-TTGGACAATGAGGCTCTCTACGATATCTGTTTCCGTACCCTCAA 754
|| || || ||||| ||| |||| || ||||||||||||||||||||||| || |||||
Sbjct 604 GATGAATGCATGGTCCTTG-ACAACGAAGCTCTCTACGATATCTGTTTCCGCACTCTCAA 662
Query 755 GCTC-GCTAATCCTACCTTTGGTGATCTT-AACCATCTC-ATCTCTGCTACAATGAGTGG 811
|| || | ||||| |||||| || ||| ||||| || |||||||| || ||||||||
Sbjct 663 ACTTAGC-ACTCCTAGCTTTGGAGA-CTTGAACCA-CTTGATCTCTGCAACCATGAGTGG 719
Query 812 TGTCACTTGCTGTCTTC-G-TTTCCCTGGCCAGCTTAACTCTGACCTTAGGAAACTCGCT 869
||| ||||||| | || | ||||| ||| || || ||||||||||| |||||||| ||
Sbjct 720 TGTGACTTGCTCT-TTAAGGTTTCC-TGGACAACTCAACTCTGACCTAAGGAAACTGGCC 777
Query 870 GTGAACCTTATCCCATTCCCAAGGCTTCACTTCTTCATGGTTGGTTTCGCACCAT-TGAC 928
|||||||||||||||||||| | || || ||||||||||| |||||||| || | | ||
Sbjct 778 GTGAACCTTATCCCATTCCCTCGTCTCCATTTCTTCATGGTGGGTTTCGCGCC-TCTCAC 836
Query 929 ATCGAGAGGATCACAGCAATACAGTGCCTTGAGTGTTCCTGAACTGACCCAGCAGATGTG 988
|| | || || || || |||| | || | | || || || || |||||||| |||||
Sbjct 837 TTCCCGTGGCTCCCAACAGTACATTTCCCTCACAGTCCCCGAGCTAACCCAGCAAATGTG 896
Query 989 GGATGC-AAAGAACATGATGTGTGCTGCTGACCCTCGTCATGGACGTTACTTGACTGCAT 1047
||| || ||| |||||||||||||| ||||| || || || ||||||||| | || ||||
Sbjct 897 GGACGCCAAA-AACATGATGTGTGCAGCTGATCCACGCCACGGACGTTACCTCACAGCAT 955
Query 1048 CCGCTGTGTTCCGTGGAAAGCTGAGCACCAAAG-AGGTTGACGAGCAGATGATGAACATT 1106
| ||| | ||| | ||||| ||||||| |||| | |||||||| ||||| |||| |
Sbjct 956 CGGCTATTTTCAGAGGAAAAATGAGCAC-AAAGGAAGTTGACGAACAGATCCTGAATGTC 1014
Query 1107 CAGAACAAGAACTCATCCTACTTTGTGGAATGGATCCCAAACAACGTCAAGTCCAGTGTC 1166
|||||||||||||||||||||||||| ||||||||||||||||| || |||||||| |||
Sbjct 1015 CAGAACAAGAACTCATCCTACTTTGTTGAATGGATCCCAAACAATGTGAAGTCCAGCGTC 1074
Query 1167 TGTGATATTGCACCAAAGGGTTTGAAAATGGCGTCTAC-TTTCATTGGTAACTCAACCTC 1225
|| || ||| |||||| || | |||||||| || || ||| | || ||||| || ||
Sbjct 1075 TGCGACATTCCACCAACTGGAATCAAAATGGCTTCCACATTTG-TCGGAAACTCGACTTC 1133
Query 1226 AATCCAGGAGATGTTTAGGCGTGTGAGCGAACAGTTCACAGCTATGTTCAGGAG-AAAGG 1284
|||||| || ||||| ||| | || |||||||||||||| |||||||||||| | ||||
Sbjct 1134 AATCCAAGAAATGTTCAGGAGAGTAAGCGAACAGTTCACGGCTATGTTCAGGCGTAAAG- 1192
Query 1285 CTTTCCTT-CATTGGTACACAGGAGAAGGCATGGACGAGATGGAGTTCACTGAAGCAGAG 1343
||||| || |||||||||||||| ||||| ||||| |||||||| |||||||||||||||
Sbjct 1193 CTTTC-TTGCATTGGTACACAGGTGAAGGAATGGATGAGATGGAATTCACTGAAGCAGAG 1251
Query 1344 AGTAACATGAATGATCTTGTCGCAGAGTACCAGCAGTACCAAGATGCTACAGCCGGAGAG 1403
|| ||||||||||| || || || || |||||||| |||||||||||||| || | ||
Sbjct 1252 AGCAACATGAATGACCTGGTGGCTGAATACCAGCAATACCAAGATGCTACCGCTGCTGAA 1311
Query 1404 GAAGA-G--TACGAGGAGGAAGAAGA 1426
|||| | ||||| || ||||||||
Sbjct 1312 GAAGGCGAATACGAAGATGAAGAAGA 1337
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 63344077435
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5