BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G44380.1 Length=1848 Score E Sequences producing significant alignments: (Bits) Value Ahg948681 jgi|Araly1|948681|scaffold_800568.1 2422 0.0 Ahg330958 jgi|Araly1|330958|fgenesh1_pm.C_scaffold_8000301 1393 0.0 Ahg494546 jgi|Araly1|494546|fgenesh2_kg.8__362__AT5G44400.1 1131 0.0 Ahg356638 jgi|Araly1|356638|fgenesh1_pg.C_scaffold_8000425 536 2e-151 > Ahg948681 jgi|Araly1|948681|scaffold_800568.1 Length=1666 Score = 2422 bits (1311), Expect = 0.0 Identities = 1553/1670 (93%), Gaps = 15/1670 (1%) Strand=Plus/Plus Query 52 CTTGCATATTCGCTGCAAGGATGGGAAATTCAAAACCACTCCCTACAATTTCTTGTATTA 111 ||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||| Sbjct 1 CTTGCATATTCGCTGCAAGGATGGGGATTTCAAAACCACACCCTACAATTTCTTGTATT- 59 Query 112 TAG-TTTCAGTCTTGTATTTTTCATTCTATTGCATAACACCAACTTCTTCATCAGCCTCC 170 | | ||| ||| || ||| | ||||| ||||||||||||||||||||||||||||||||| Sbjct 60 TTGTTTTTAGTTTTTTATCTCTCATTATATTGCATAACACCAACTTCTTCATCAGCCTCC 119 Query 171 ATCCAAGATCAATTCATAAACTGTGTCAAAAGAAACACACATGTTTCTTTTCCACTCGAG 230 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 120 CTCCAAGATCAATTCATAAACTGTGTCAAAAGAAACACGCATGTTTCTTTTCCACTCGAG 179 Query 231 AAAACGTTATTCACCCCTGCGAAAAACGTCTCTTTGTTCAACCAAGTCCTTGAATCGACG 290 | |||||||| | ||||| |||||||||||| |||||| ||||||||||||||| ||| Sbjct 180 ACTACGTTATTTGCTCCTGCAAAAAACGTCTCTATGTTCAGCCAAGTCCTTGAATCAACG 239 Query 291 GCTCAAAATCTCCAGTTCTTGGCAAAATCCATGCCTAAACCGGGATTCATATTCAGACCG 350 |||||||||||||||||||||||||||||| |||||||||||||||||||||| || || Sbjct 240 GCTCAAAATCTCCAGTTCTTGGCAAAATCCTTGCCTAAACCGGGATTCATATTTAGGCCA 299 Query 351 ATTCACCAGTCTCAAGTCCAAGCTTCCATCATTTGTTCAAAGAAACTCGGAATTCATTTT 410 |||||| ||||||||||||||||||| ||||| ||||| ||||||||||||||||||||| Sbjct 300 ATTCACGAGTCTCAAGTCCAAGCTTCTATCATCTGTTCTAAGAAACTCGGAATTCATTTT 359 Query 411 CGTGTTAGAAGTGGCGGTCACGATTTCGAGGCCTTGTCTTATGTTTCACGGATTGAAAAA 470 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 360 CGTGTTAGAAGTGGCGGTCACGATTTCGAGGCCTTGTCTTATGTCTCACGGATTGAAAAA 419 Query 471 CCGTTTATATTACTCGACCTGTCAAAATTGAAACAAATCAATGTTGATATTGAATCCAAT 530 |||||||||||| |||| ||||| ||||||| |||| || |||||||||||||| ||||| Sbjct 420 CCGTTTATATTAATCGATCTGTCGAAATTGAGACAAGTCGATGTTGATATTGAAACCAAT 479 Query 531 AGTGCTTGGGTTCAACCTGGTGCTACGCTTGGTGAGCTTTACTACAGAATTGCAGAGAAG 590 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 480 AGTGCTTGGGTTCAACCTGGTGCTACGCTTGGTGAGCTTTACTACAGAATTGCAGAGAAG 539 Query 591 AGC-AAGATCCATGGATTTCCCGCGGGTTTGTGCACAAGTGTAGGCATAGGTGGGTATAT 649 ||| ||| ||||||||||||||||||||||||| || || |||||||||||||||||||| Sbjct 540 AGCAAAG-TCCATGGATTTCCCGCGGGTTTGTGTACGAGCGTAGGCATAGGTGGGTATAT 598 Query 650 GACAGGCGGTGGATACGGTACCTTGATGAGGAAGTATGGTCTTGCGGGAGATAATGTTCT 709 |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 599 GACAGGGGGTGGATACGGTTCCTTGATGAGGAAGTATGGTCTTGCGGGAGATAATGTTCT 658 Query 710 AGACGTAAAGATGGTTGATGCAAATGGTAAATTACTCGACAGAGCCGCGATGGGTGAGGA 769 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 659 AGACGTAAAGATGGTTGATGCAAATGGTAAATTACTCGACAGAACCGCGATGGGTGAGGA 718 Query 770 CCTATTTTGGGCGATTAGAGGAGGCGGTGGAGCGAGTTTCGGGATAGTTCTAGCATGGAA 829 ||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct 719 CCTATTTTGGGCGCTTAGAGGAGGCGGTGGAGCGAGTTTTGGGATAGTTCTCGCATGGAA 778 Query 830 GATCAAGCTTGTTCCTGTTCCTAAGACTGTTACCGTCTTCACTGTCACCAAAACGTTAGA 889 |||||||||||||||||||||| |||| || ||| ||||||| || |||||||||||| | Sbjct 779 GATCAAGCTTGTTCCTGTTCCTGAGACCGTAACCATCTTCACCGTTACCAAAACGTTAAA 838 Query 890 ACAAGACGCAAGATTGAAGACTATTTCTAAGTGGCAACAAATTTCATCCAAGATTATTGA 949 |||||||||||||||||||| |||||||||||||||||||||| |||||||| || | || Sbjct 839 ACAAGACGCAAGATTGAAGATTATTTCTAAGTGGCAACAAATTGCATCCAAGCTTGTCGA 898 Query 950 AGAGATACACATCCGAGTGGTACTCAGAGCAGCTGGAAATGATGGAAACAAGACTGTGAC 1009 |||| ||||||||||| ||||||||||||| | ||||||| |||||||||||||| | || Sbjct 899 AGAGCTACACATCCGATTGGTACTCAGAGCCGTTGGAAATAATGGAAACAAGACTATTAC 958 Query 1010 AATGACCTACCTAGGTCAGTTTCTTGGCGAGAAAGGCACCTTGCTGAAGGTTATGGAGAA 1069 |||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 959 AATGTCCTATTTAGGTCAGTTTCTTGGCGAGAAAGGCACCTTGATGAAGGTTATGGAGAA 1018 Query 1070 GGCTTTTCCAGAACTAGGGTTAACTCAAAAGGATTGTACTGAAATGAGCTGGATTGAAGC 1129 || |||||||||||||||||||||||||||||||||||| |||||||||||||||||| | Sbjct 1019 GGATTTTCCAGAACTAGGGTTAACTCAAAAGGATTGTACCGAAATGAGCTGGATTGAATC 1078 Query 1130 CGCCCTTTTCCATGGTGGATTTCCAACAGGTTCTCCTATTGAAATTTTGCTTCAGCTCAA 1189 | ||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||| Sbjct 1079 CACCCTTTTCCATGGTGGATTTCCAACTGGTTCTCCTATTGAAATTTTGCTTCAACGCAA 1138 Query 1190 GTCGCCTCTAGGAAAAGATTACTTCAAAGCAACGTCGGATTTCGTTAAAGAACCTATTCC 1249 ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1139 GTCGCCTTTAGGAAAAGATTACTTCAAAGCAACGTCAGATTTCGTTAAAGAACCTATTCC 1198 Query 1250 TGTGATAGGGCTCAAAGGAATATTCAAAAGATTGATTGAAGGAAACACA-ACATTTCTGA 1308 ||| |||||||||||||||| ||||||||||||||||||||||| | | | |||||| | Sbjct 1199 TGTTTTAGGGCTCAAAGGAATTTTCAAAAGATTGATTGAAGGAAAGATAGA-ATTTCTCA 1257 Query 1309 ACTGGACTCCTTACGGTGGTATGATGTCGAAAATCCCTGAATCTGCGATCCCATTTCCGC 1368 |||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||| | Sbjct 1258 ACTGGACTCCCTACGGTGGTATGATGTCGAAAATCTCTGAATCCGCGATCCCATTTCCTC 1317 Query 1369 ATAGAAACGGAACCCTCTTCAAGATTCTCTATTACGCGAACTGGCTAGAGAATGACAAGA 1428 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1318 ACAGAAACGGAACCCTCTTCAAGATTCTCTATTACGCGAACTGGCTAGAGAATGACAAGA 1377 Query 1429 CATCGA-G--TAGAAAAATCAACTGGATCAAAGAGATATACAATTACATGGCGCCTTATG 1485 |||||| | |||||||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct 1378 CATCGATGAGTAGAAAAATCAAATGGATCAAAGAGATATACAGTTACATGGCGCCTTATG 1437 Query 1486 TCTCAAGCAATCCAAGACAAGCATATGTGAACTACAGAGATCTAGACTTCGGACAGAACA 1545 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1438 TCTCAAGCAATCCAAGAGAAGCATATGTGAACTACAGAGATCTAGACTTCGGACAGAACG 1497 Query 1546 AGAACAACGCAAAGGTTAACTTCATTGAAGCTAAAATCTGGGGACCTAAGTACTTCAAAG 1605 |||||||| ||||| |||||||||| |||||||||||||||||| ||||||||||||||| Sbjct 1498 AGAACAACTCAAAGTTTAACTTCATCGAAGCTAAAATCTGGGGAGCTAAGTACTTCAAAG 1557 Query 1606 GCAATTTTGACAGATTGGTGAAGATTAAAACCAAGGTTGATCCAGAG-AACTTCTTCAGG 1664 |||||| |||||||||||||||||||||| ||||||||||| || |||||||||||| Sbjct 1558 ACAATTTCAACAGATTGGTGAAGATTAAAACAAAGGTTGATCC-GAATAACTTCTTCAGG 1616 Query 1665 CACGAGCAGAGTATCCCACCTATGCCCT-A-CTAGAAGCTAGGTTCATGA 1712 |||||||||||||||||||||||||||| | | |||||||||||||||| Sbjct 1617 CACGAGCAGAGTATCCCACCTATGCCCTGAAC--GAAGCTAGGTTCATGA 1664 > Ahg330958 jgi|Araly1|330958|fgenesh1_pm.C_scaffold_8000301 Length=1626 Score = 1393 bits (754), Expect = 0.0 Identities = 1361/1647 (83%), Gaps = 70/1647 (4%) Strand=Plus/Plus Query 80 TTCAAAACCACTCCCTACAATTTCTTGTATTATAG-TTTCAGTCTTGTATTTTTCATTCT 138 ||||||||||| ||||| ||||||||||| ||| | ||| || | | ||| |||| ||| Sbjct 9 TTCAAAACCACGCCCTATAATTTCTTGTA-TATCGTTTTTAGCCCTATATATTTCTTTC- 66 Query 139 ATTGC-ATAACACCAACTTCTTCATCAGCCTC-CATCCAAGATCAATTCAT-AAACTGTG 195 || | ||||||||| |||||||| | |||| | | |||||| | ||||| ||| ||| Sbjct 67 GTTACAATAACACCAGCTTCTTCA--A-CCTCTC-TACAAGATGATTTCATCAAA-TGTC 121 Query 196 T-CAAAAGAAACACACATGTTTC-TTTTCCACTCGAGAAAACGTTATTCACCCCTGCGAA 253 | || || ||||||| ||| | | |||||||||||| |||||||| ||||| |||| || Sbjct 122 TCCACAA-AAACACAAATG-TCCGTTTTCCACTCGACAAAACGTTCTTCACTCCTG-AAA 178 Query 254 -AAACGTC-TCTTTGTTCAACC-AAGTCCTTGAATCGACGGCTCAAAATCTCCAGTT-CT 309 |||| || || | ||| ||| ||||| ||||||||||||||||||||| | ||| | Sbjct 179 GAAAC-TCTTCGATCTTC-ACCGAAGTCTTTGAATCGACGGCTCAAAATCAACGGTTAC- 235 Query 310 TGGCAAAATCCATGCCTAAACCGGGATTCATATTCAGACCGATTCACCAGTCTCAAGTCC 369 || | || | ||||||||||||||||||||||| || |||||||| ||||||| || | Sbjct 236 TGACCAAGGCAATGCCTAAACCGGGATTCATATTTAGGCCGATTCATGAGTCTCATGTTC 295 Query 370 AAGCTTCCATCATTTGTTCAAAGAAACTCGGAATTCATTTTCGTGTTAGAAGTGGCGGTC 429 ||||||| |||| ||||| |||||||| ||||| ||||||||||||||||| ||||||| Sbjct 296 AAGCTTCTGTCATCTGTTCGAAGAAACTTGGAATACATTTTCGTGTTAGAAGCGGCGGTC 355 Query 430 ACGATTTCGAGGCCTTGTCTTATGTTTCACGGATTGAAAAACCGTTTATATTACTCGACC 489 |||||| ||||| | ||||||||||||||||||| ||||| |||||| ||||| |||| Sbjct 356 ACGATTACGAGGGCGTGTCTTATGTTTCACGGATCGAAAACCCGTTTGTATTAATCGATT 415 Query 490 TGTCAAAATTGAAACAAATCAATGTTGATATTGAATCCAATAGTGCTTGGGTTCAACCTG 549 |||| ||||||| |||||||||| ||||||||||| ||||||||||||||||||| ||| Sbjct 416 TGTCGAAATTGAGACAAATCAATATTGATATTGAAGACAATAGTGCTTGGGTTCAAGCTG 475 Query 550 GTGCTACGCTTGGTGAGCTTTACTACAGAATTGCAGAGAAGAGCAAGATCCATGGATTTC 609 ||||||| |||||||||||||||||||||||||||| ||||||||||| |||||| ||| Sbjct 476 GTGCTACTATTGGTGAGCTTTACTACAGAATTGCAGAAAAGAGCAAGATTCATGGA-TTC 534 Query 610 CC-GCGGGTTTGTGCACAAGTGTAGGCATAGGTGGGTATATGACAGGCGGTGGATACGGT 668 || || ||| ||| | | ||| |||||||||||||| |||| |||||||||| ||||||| Sbjct 535 CCTGCAGGTGTGTACCCGAGTTTAGGCATAGGTGGGCATATAACAGGCGGTGCATACGGT 594 Query 669 ACCTTGATGAGGAAGTATGGTCTTGCGGGAGATAATGTTCTAGACGTAAAGATGGTTGAT 728 ||||||||||||||||||||||||| | ||||||||||||||||| |||||| |||||| Sbjct 595 TCCTTGATGAGGAAGTATGGTCTTGCTGCAGATAATGTTCTAGACGCAAAGATCGTTGAT 654 Query 729 GCAAATGGTAAATTACTCGACAGAGCCGCGATGGGTGAGGACCTATTTTGGGCGATTAGA 788 || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 655 GCTAATGGTAAATTACTCGACAGAGCCGCGATGGGTGAGGATCTATTTTGGGCGATTAGA 714 Query 789 GGAGGCGGTGGAGCGAGTTTCGGGATAGTTCTAGCATGGAAGATCAAGCTTGTTCCTGTT 848 || || |||||| |||||| |||||| || || |||||||||||||||||||||||||| Sbjct 715 GGCGGTAGTGGAGGGAGTTTTGGGATAATTTTATCATGGAAGATCAAGCTTGTTCCTGTT 774 Query 849 CCT-AAGACTGTTACCGTCTTCACTGTCACCAAAACGTTAGAA-CAAGACGCAAGATTGA 906 ||| || || | ||||||||||| |||||||| || || ||| ||||| ||||| || | Sbjct 775 CCTGAA-ACCATAACCGTCTTCACGGTCACCAAGACATT-GAAGCAAGATGCAAGTTTCA 832 Query 907 AGACTATTTCTAAGTGGCAACAAATTTCATCCAAGATTATTGAAGAGATACA-CATCCGA 965 ||| | ||| ||||||||||||| || | |||| || |||||||| | | | | ||| Sbjct 833 AGATTCTTTTTAAGTGGCAACAAGTTGCGGACAAGCTTGTTGAAGAGCT-CTTCTTACGA 891 Query 966 GTGGTACT-CAGAGCAGCTGGAAATGATGGAAACAAGACTGTGACAATGACCTACCTAGG 1024 ||| | || || | || |||||| | | ||||||||| || | ||| ||||| |||| Sbjct 892 GTGTT-CTTCACTGTAGTTGGAAACAAAGCAAACAAGACAGTTTCGATGGCCTACATAGG 950 Query 1025 TCAGTTTCTTGGCGAGAAAGGCACCTTGCTGAAGGTTATGGAGAAGGCTTTTCCAGAACT 1084 |||||||||||||||||||| |||||| || |||| |||||||||| |||||||||||| Sbjct 951 TCAGTTTCTTGGCGAGAAAGAAACCTTGATGGAGGTAATGGAGAAGGATTTTCCAGAACT 1010 Query 1085 AGGGTTAACTCAAAAGGATTGTACT-GAAATGAGCTGGATTGAAGCCGCCCTTTTCCATG 1143 |||| |||| || |||||||||| | ||||||| |||||| || || ||| | | | Sbjct 1011 AGGGCTAACGCAGAAGGATTGTA-TAGAAATGAACTGGATCAAATCCATTATTTAC-A-G 1067 Query 1144 GT--GGATTTCCAACAGG-T-TC-TCCT---ATTGAAATTTTGCTTCA-GCTCAAGTCGC 1194 | ||||| |||||| | | || |||| ||||| ||||||||||| || ||||| | Sbjct 1068 CTCTGGATTCCCAACAAGCTCTCCTCCTCCCATTGAGATTTTGCTTCAAGCA-AAGTCTC 1126 Query 1195 CTCTAGGAAAAGATTACTTCAAAGC-AACGTCGGATTTCGTTAAAGAACCTATTCCTGTG 1253 | || ||||||| |||||| ||||| || |||||||||| |||||||| ||||||||| Sbjct 1127 CACTTGGAAAAGTTTACTTTAAAGCGAAA-TCGGATTTCGCTAAAGAACTTATTCCTGTT 1185 Query 1254 ATAGGGCTCAAAGGAATATTCAA-AAGATTGATTGAAGGAA-ACACAACATTTCTGAACT 1311 ||||||||||||| || |||| ||| ||| |||||| || || || |||| ||| | Sbjct 1186 TTAGGGCTCAAAGGGATGCTCAAGAAG-TTGCTTGAAG-AAGACGCAGCATTAGTGATTT 1243 Query 1312 GGACTCCTTACGGTGGTATGATGTCGAAAATCCCTGAATCTGCGATCCCATTTCCGCATA 1371 |||||||||||||||| | |||| |||||||||||||| | |||||| |||||||||| Sbjct 1244 GGACTCCTTACGGTGGAAAGATGAATAAAATCCCTGAATCCGAGATCCCGTTTCCGCATA 1303 Query 1372 GAAACGGAACCCTCTTCAAGATTCTCTATTAC-GCGAACTGG-CTAGAGAATGACAAG-A 1428 ||||||||||| ||||| ||||| || ||| | || |||| | ||| | | | || | Sbjct 1304 GAAACGGAACCAACTTCATGATTCAATACTACAG-GAGCTGGTC-AGATA--G-CGAGGA 1358 Query 1429 CATCGAGTAGAAAA--ATCAACTGGATCAAAGAGATATACAATTACATGGCGCCTTATGT 1486 ||||| | ||| ||||| ||||||| |||| | |||| ||||||| ||||||| || Sbjct 1359 -ATCGA--ACAAACGCATCAAATGGATCAGAGAGTTGTACAGTTACATGACGCCTTACGT 1415 Query 1487 CTCAAGCAATCCAAGACAAGCATATGTGAACTACAGAGATCTAGACTTCGGACAGAACAA 1546 ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct 1416 TTCAAGCAATCCAAGACAAGCATATGTGAACTACAGAGATCTAGACCTGGGACAGAACAA 1475 Query 1547 GAACAACGCAAAGGT-TAACTTCATTGAAGCTAAAATCTGGGGACCTAAGTACTTCAAAG 1605 ||||||| ||||| | ||||||||| |||||||||| |||||| ||||||||||||||| Sbjct 1476 GAACAACTCAAAG-TCTAACTTCATAGAAGCTAAAAGATGGGGAGCTAAGTACTTCAAAG 1534 Query 1606 GCAATTTTGACAGATTGGTGAAG-ATTAAAACCAAGGTTGATCCAGAGAACTTCTTCAGG 1664 |||||| | |||||||| ||| |||||||| |||||||||||||| |||||||| || Sbjct 1535 ACAATTTCAAAAGATTGGT-AAGGATTAAAACAAAGGTTGATCCAGATAACTTCTTTAGA 1593 Query 1665 CACGAGCAGAGTATCCCACCTATGCCC 1691 |||||||||||||||||| || ||||| Sbjct 1594 CACGAGCAGAGTATCCCAACTCTGCCC 1620 > Ahg494546 jgi|Araly1|494546|fgenesh2_kg.8__362__AT5G44400.1 Length=1680 Score = 1131 bits (612), Expect = 0.0 Identities = 1327/1662 (80%), Gaps = 90/1662 (5%) Strand=Plus/Plus Query 72 ATGGGAAATTCAAAACCACTCCCTAC-AATTTC-TTGTATTATAG-TTTCAGT-CTTGTA 127 |||||| |||||||||||||||| | | |||| || | || | | ||| || | | || Sbjct 2 ATGGGATTTTCAAAACCACTCCCT-CTATTTTCATT-TCTT-TCGATTTTGGTGC-TCTA 57 Query 128 TTTTTCATTCTATTGCATAACACCAACTTCTTCATCAGCCTCCATCCAAGATCAATTCAT 187 |||||||||||| |||||||||||||||||||| ||||||| | || |||||||| || Sbjct 58 TTTTTCATTCTACACCATAACACCAACTTCTTCATTAGCCTCCCTACAGGATCAATTTAT 117 Query 188 AAACTGTGTCAAAAGAAACACACATGTTT-CTTTTCCACTCGAGAAAACGTTATTCACCC 246 ||||||||| |||||||||||||||||| | || ||||| |||||||| || || | | Sbjct 118 CAACTGTGTCCAAAGAAACACACATGTTTAC-TTCCCACTTGAGAAAACATTCTTTGCTC 176 Query 247 CTGCGAAAAACGTCTCTTTGTTCAACCAAGTCCTTGAATCGACGGCTCAAAATCTCCAGT 306 || ||||||| |||||| |||||| |||||| ||||||||||||||||| ||||||| || Sbjct 177 CTACGAAAAATGTCTCTATGTTCACCCAAGTTCTTGAATCGACGGCTCAGAATCTCCGGT 236 Query 307 TCTTGGCAA-AATCCATGCCTAAACCGGGATTCATATTCAGACCGATTCACCAGTCTCAA 365 |||| | || ||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct 237 TCTT-GAAACAATCCATGCCTAAACCGGGATTCATATTCAGCCCGATTCATGAGTCTCAC 295 Query 366 GTCCAAGCTTCCATCATTTGTTCAAAGAAACTCGGAATTCATTTTCGTGTTAGAAGTGGC 425 || ||||||||||| || ||||| ||||||||| |||| ||| | ||||| ||||| ||| Sbjct 296 GTACAAGCTTCCATTATCTGTTCCAAGAAACTCCGAATGCATCTACGTGTCAGAAGCGGC 355 Query 426 GGTCACGATTTCG-AGGCCTTGTCTTATGTTTCACGGATTGAAAAACCGTTTATATT-AC 483 |||||||| | || ||| |||||||||||| || | || || |||||||||||||| | Sbjct 356 GGTCACGACTACGAAGG-CTTGTCTTATGTCTCTCAAATCGATAAACCGTTTATATTGA- 413 Query 484 TCGACCTGTCAAA-ATTGAAACAAATCAATGTTGATATTGAATCCAATAGTGCTTGGGTT 542 | || |||||||| | ||| |||| |||| || ||||| || ||| |||||||||||| Sbjct 414 TGGATCTGTCAAAGA-TGAGACAAGTCAACATTAATATTCAAGACAACAGTGCTTGGGTT 472 Query 543 CAACCTGGTGCTAC-GCTTGGTGAGCTTTACTACAGAATTGCAGAGAAGAGC-AAGATCC 600 ||| |||||||||| | ||||||| ||||| ||||| ||||||||||||||| ||| ||| Sbjct 473 CAATCTGGTGCTACAG-TTGGTGAACTTTATTACAGGATTGCAGAGAAGAGCAAAG-TCC 530 Query 601 ATGGATTTCCC-GCGGGTTTGTGCACAAG-TGTAGGCATAGGTGGGTATATGACAGGCGG 658 |||| ||||| ||||| |||||| | || | |||||||||| ||| | || |||||||| Sbjct 531 ATGG-GTTCCCGGCGGGGTTGTGCTCGAGCT-TAGGCATAGGAGGGCACATAACAGGCGG 588 Query 659 TGGATACGGTACCTTGATGAGGAAGTATGGTCTTGCGG-G-AGATAATGTTCTAGACGTA 716 || ||||||| || ||||||| || || |||| | ||| | ||| ||||||||||||| | Sbjct 589 TGCATACGGTTCCATGATGAGAAAATACGGTC-T-CGGTGCAGACAATGTTCTAGACGCA 646 Query 717 AAGATGGTTGATGCAAATGGTAAATTACTCGACAGAGCCGCGATGGGTGAGGA-CCTATT 775 || || |||||||| ||||||| |||||||||||| ||||||||||||||||| | ||| Sbjct 647 AAAATTGTTGATGCCAATGGTAGATTACTCGACAGGGCCGCGATGGGTGAGGATAC-ATT 705 Query 776 TTGGGCGATTAGAGGAGGCGGTGGAGCGAGTTTCGGGATAGTTCTAGCATGGAAGATCAA 835 |||||||||||||||||||| ||||| |||||| || ||| ||||||||||||||||||| Sbjct 706 TTGGGCGATTAGAGGAGGCGCTGGAGGGAGTTTTGGAATAATTCTAGCATGGAAGATCAA 765 Query 836 GCTTGTTCCTGTTCCTAAGACTGTTACCGTCTTCACTGTCACCAAAACGTTAGAACAAGA 895 |||||||||||||||| |||| || ||||||||||| ||||||||||||||| | ||||| Sbjct 766 GCTTGTTCCTGTTCCTCAGACCGTGACCGTCTTCACCGTCACCAAAACGTTACATCAAGA 825 Query 896 CGCAAG-ATTGAAGACTATTTCTAAGTGGCAACAAATTT-CATCCAAGATTATTGAAGAG 953 || | | |||| ||| || ||||||||| | | || | |||| || |||||||| Sbjct 826 CGTTGGCAAC-AAGATTATCTCAAAGTGGCAA-AGAGTTGCGGACAAGCTTGTTGAAGAG 883 Query 954 ATACACATCCGAGTGGTACT-CAGA-GCAGCTGGAAATGATGGAAACAAGACTGTGACAA 1011 || ||| ||||| | || || | | ||||||||| | ||| |||||||||||||||| Sbjct 884 CTATTTATCAGAGTGCT-CTTCA-ACGTAGCTGGAAACGGTGGGAACAAGACTGTGACAA 941 Query 1012 TGACC-TACCTAGG-TCAGTTTCTTGGCGAGAAAGGCACCTTGCTGAAGGTTATGGAGAA 1069 | | ||| | | || ||||||||||| ||||||||| ||| |||| |||||| |||| Sbjct 942 C-ATCGTACA-ACGCTCTGTTTCTTGGCGGGAAAGGCACATTGATGAAAGTTATGAAGAA 999 Query 1070 G-GCTTTTCCAGAACTAGGGTTAACTCA-AAAGGATTGTA-CTGAAATGAGCTGGATTGA 1126 | | ||| || || |||||| |||| | |||| |||||| | |||||||||||| |||| Sbjct 1000 GAG-TTTCCCCGAGCTAGGGCTAACACTTAAAG-ATTGTATC-GAAATGAGCTGGCTTGA 1056 Query 1127 AGCCGCCCTT-TTCCATGG-TGGATTTCCAA-C-AGGTTC-TCCTATTGAAATTTTGCTT 1181 | || || || ||| |||||| || | | | || | ||| || |||||||| Sbjct 1057 ATCCAT--TTCTTACATTTCTGGATTCCCCAGCCACACTCCTACTAGTG---TTTTGCTT 1111 Query 1182 CAGCTCAAGTCGCCTCTAGGAAAAGATTA-CTTCAAAGC-AACGTCGGATTTCGTTAAAG 1239 ||| ||||||||| | ||| ||| | ||||||||| || ||||||||||| ||| Sbjct 1112 CAGGGGAAGTCGCCTTTCCCAAA-GATCAGCTTCAAAGCCAAA-TCGGATTTCGTGAAA- 1168 Query 1240 AACCT-ATTCCTGTGATA-GGGCT-CAAAGGAATATTCAA-AAGATTGATTGAAGGAA-A 1294 | || ||||| | || ||||| ||| ||| | ||||| ||| | || ||| || | Sbjct 1169 ACCCCGATTCCCGA-ATCCGGGCTTCAAGGGA-TCTTCAAGAAGCTAC-TTAAAG-AAGA 1224 Query 1295 CACAACATTTCTGA-ACTGGACTCCTTACGGTGGTATGATGTCGAAAATCCCTGAATCTG 1353 | |||| ||| | |||| ||||||||| || |||||| |||||||||| ||||| Sbjct 1225 TATTCCATTGATGATA-TGGAATCCTTACGGAGGAATGATGGCGAAAATCCCCGAATCA- 1282 Query 1354 CGA-TCCCATTTCCGCATAGAAACGGAACCCTCTTCAAGATTCTCTATTACGCGAAC--- 1409 | | |||| |||||||||||||| ||| ||||||||| | | || | |||| ||| Sbjct 1283 CAAATCCCTTTTCCGCATAGAAAAGGAGTCCTCTTCAA-AGT-TC-AGTACGT-AACAAG 1338 Query 1410 T-GGCTAGAGAATGACAAGACATCGAGTAGAAAAATCAACTGGATCAAAGAGATATACAA 1468 | ||||||| | ||||||| | |||| ||| | ||||||||||||| ||| | ||||| Sbjct 1339 TTGGCTAGACAGCGACAAGAGACCGAGCAGACACATCAACTGGATCAGAGATCTCTACAA 1398 Query 1469 TTACATGGCGCCTTATGTCTCAAGCAATCCAAGACAAGCATATGTGAACTACAGAGATCT 1528 ||||||| |||||||||||||||| |||||| || |||| |||||||||||| | ||||| Sbjct 1399 TTACATGACGCCTTATGTCTCAAGTAATCCACGAGAAGCTTATGTGAACTACCGCGATCT 1458 Query 1529 AGACTTCGGACAGAACA-AGAACAACGC-AAAGGTTAACTTCATTGAAGCTAAAATCTGG 1586 |||| ||||| |||||| | || | || ||| | | ||| ||||| || ||||| Sbjct 1459 AGACCTCGGAAAGAACACAAAAGA-CGTGAAAACATG-CATCAAACAAGCTCAAGTCTGG 1516 Query 1587 GGACCTAAGTACTTCAAAGGCAATTTTGACAGATTGGTGAAGATTAAAACCAAGGTTGAT 1646 ||| |||| ||||||||| |||||| |||||||| ||||||||||| | ||||||||| Sbjct 1517 GGAGCTAACTACTTCAAAAACAATTTCAACAGATTGATGAAGATTAAATCAAAGGTTGAT 1576 Query 1647 CCAGAGAACTTCTTCAGGCACGAGCAGAGTATCCCACCTATG 1688 ||||||||||||||||| ||||||||||| || ||||||||| Sbjct 1577 CCAGAGAACTTCTTCAGACACGAGCAGAGCATTCCACCTATG 1618 > Ahg356638 jgi|Araly1|356638|fgenesh1_pg.C_scaffold_8000425 Length=1065 Score = 536 bits (290), Expect = 2e-151 Identities = 360/394 (91%), Gaps = 4/394 (1%) Strand=Plus/Plus Query 1300 CATTTCTGAACTGGACTCCTTACGGTGGTATGATGTCGAAAATCCCTGAATCTGCGATCC 1359 |||||||||| |||||||||||||||||||||||| ||||||| |||||||||| ||||| Sbjct 662 CATTTCTGAATTGGACTCCTTACGGTGGTATGATGGCGAAAATTCCTGAATCTGAGATCC 721 Query 1360 CATTTCCGCATAGAAACGGAACCCTCTTCAAGATTCTCTATTACGCGAACTGGCTAGAGA 1419 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||| ||||| Sbjct 722 CATTTCCGCATCGAAACGGAACCCTCTTCAAGATTCTTTATCAAACGAACTGGCAAGAGA 781 Query 1420 ATGACAAGACATC-GAGTAGAAAAATCAACTGGATCAAAGAGATATACAATTACATGGCG 1478 ||||||||| | | ||||||| | |||||||||||||||||||| |||| |||||||||| Sbjct 782 ATGACAAGAGA-CAGAGTAGACACATCAACTGGATCAAAGAGATGTACAGTTACATGGCG 840 Query 1479 CCTTATGTCTCAAGCAATCCAAGACAAGCATATGTGAACTACAGAGATCTAGACTTCGGA 1538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 841 CCTTATGTCTCAAGCAATCCAAGACAAGCATATGTGAACTACAGAGATCTAGACTTCGGA 900 Query 1539 CAGAACAAGAACAACGCAAAGGTTAACTTCATTGAAGCTAAAATCTGGGGACCTAAGTAC 1598 ||||||||||||||| |||||||||||||||| |||||||||||||||||| |||| || Sbjct 901 CAGAACAAGAACAACTCAAAGGTTAACTTCATAGAAGCTAAAATCTGGGGAGCTAATTAT 960 Query 1599 TTCAAAGGCAATTTTGACAGATTGGTGAAGA-TTAAAACCAAGGTTGATCCAGAGAACTT 1657 ||||||| |||||| ||||| |||||| || ||||||| |||||||||||||| ||||| Sbjct 961 TTCAAAGACAATTTCAACAGACTGGTGA-GAATTAAAACAAAGGTTGATCCAGATAACTT 1019 Query 1658 CTTCAGGCACGAGCAGAGTATCCCACCTATGCCC 1691 ||| || |||||||||||||||||| || ||||| Sbjct 1020 CTTTAGACACGAGCAGAGTATCCCAACTCTGCCC 1053 Score = 483 bits (261), Expect = 3e-135 Identities = 350/392 (89%), Gaps = 10/392 (3%) Strand=Plus/Plus Query 833 CAAGCTTGTTCCTGTTCCT-AAGACTGTTACCGTCTTCACTGTCACCAAAACGTTAGAAC 891 ||||||||||||||||||| || || | |||||||||||||| |||||||| ||||||| Sbjct 261 CAAGCTTGTTCCTGTTCCTGAA-ACCCTAACCGTCTTCACTGTTACCAAAACATTAGAAC 319 Query 892 AAGACGCAAGATTGAAGACTATTTCTAAGTGGCAACAAATTTCATCCAAGATTATTGAAG 951 |||||||||||||||||| ||||||||||||||||| |||| |||||||| ||||||||| Sbjct 320 AAGACGCAAGATTGAAGATTATTTCTAAGTGGCAACGAATTGCATCCAAGCTTATTGAAG 379 Query 952 AGATACACATCCGAGTGGTACTCAGAG-CAGCTGGAAATGATGGAAACAAGACTGTGACA 1010 || ||||||||||||||| |||||||| || ||||||| | |||||||||||||||||| Sbjct 380 AGCTACACATCCGAGTGGAACTCAGAGCCA-TTGGAAATAACGGAAACAAGACTGTGACA 438 Query 1011 ATGACCTACCTAGGTCAGTTTCTTGGCGAGAAAGGCACCTTGCTGAAGGTTATGGAGAAG 1070 ||| ||||| |||||||||||||||| ||||||||| |||| ||||||||||| ||||| Sbjct 439 ATGTCCTACAAAGGTCAGTTTCTTGGCAAGAAAGGCATCTTGATGAAGGTTATGAAGAAG 498 Query 1071 GCTTTTCCAGAACTAGGGTTAACTCAA-AAGGATTGTACT-GAAATGAGCTGGATTGAAG 1128 ||||||||||| |||||||| |||||| || ||||||| | |||||||| ||||||||| Sbjct 499 GCTTTTCCAGAGCTAGGGTTGACTCAAGAA-GATTGTA-TCGAAATGAGTTGGATTGAAT 556 Query 1129 CCGCCCTTTTCCATGGTGGATTTCCAACAGGTTCTCCTATTGAAATTTTGCTTCA-GCTC 1187 || |||||||| ||||||||||||||||||||||||||||||| |||||||||| | || Sbjct 557 CCACCCTTTTCGGTGGTGGATTTCCAACAGGTTCTCCTATTGAAGTTTTGCTTCAAG-TC 615 Query 1188 AAGTCGCCTCTAGGAAAAGATTACTTCAAAGC 1219 ||||| ||| ||||||||| |||||||||||| Sbjct 616 AAGTCTCCTTTAGGAAAAGGTTACTTCAAAGC 647 Score = 383 bits (207), Expect = 3e-105 Identities = 241/258 (93%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 321 ATGCCTAAACCGGGATTCATATTCAGACCGATTCACCAGTCTCAAGTCCAAGCTTCCATC 380 ||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||| Sbjct 1 ATGCCTAAACCGGGATTCATATTTAGGCCGATTCACGAGTCTCAAGTCCAAGCTTCCATC 60 Query 381 ATTTGTTCAAAGAAACTCGGAATTCATTTTCGTGTTAGAAGTGGCGGTCACGATTTCGAG 440 || ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct 61 ATCTGTTCCAAGAAACTCGGTATTCATTTTCGTGTTAGAAGTGGCGGTCACGATTTTGAG 120 Query 441 GCCTTGTCTTATGTTTCACGGATTGAAAAACCGTTTATATTACTCGACCTGTCAAAATTG 500 ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct 121 GCCTTGTCTTATGTTTCACGGATTGAAAAACCGTTTATATTACTCGATATGTCGAAATTG 180 Query 501 AAACAAATCAATGTTGATATTGAATCCAATAGTGCTTGGGTTCAACCTGGTGCTACGCTT 560 | |||||||| |||||||||| || ||||||||||||||||||||||||||| |||||| Sbjct 181 AGACAAATCACTGTTGATATTAAAGACAATAGTGCTTGGGTTCAACCTGGTGCCACGCTT 240 Query 561 GGTGAGCTTTACTACAGA 578 || ||||||||||||||| Sbjct 241 GGCGAGCTTTACTACAGA 258 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 69400426390 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5