BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G44510.1
Length=3564
Score E
Sequences producing significant alignments: (Bits) Value
Ahg948663 jgi|Araly1|948663|scaffold_800550.1 4488 0.0
Ahg891936 jgi|Araly1|891936|Al_scaffold_0007_3922 619 4e-176
Ahg891930 jgi|Araly1|891930|Al_scaffold_0007_3916 579 6e-164
Ahg887641 jgi|Araly1|887641|Al_scaffold_0020_1 366 5e-100
Ahg905841 jgi|Araly1|905841|Al_scaffold_0003_2969 111 3e-23
> Ahg948663 jgi|Araly1|948663|scaffold_800550.1
Length=3574
Score = 4488 bits (2430), Expect = 0.0
Identities = 2738/2889 (95%), Gaps = 12/2889 (0%)
Strand=Plus/Plus
Query 1 ATGGATTCTTCATGTTTCTTGGTTTATAGAATATTCAGATTTCGTAAAAGAAATAAGAAT 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 21 ATGGATTCTTCATGTTTCTTGGTTTATAGAATATTCAGATTTCGTAAAAGAAATAAAAAT 80
Query 61 ATttcttcttctctatcttcttcatctcccccttcttcttTGTCTCAAAATTGGTTGCAC 120
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 81 ATTCCTTCTTCTCTATCTCCTTCATCTCCCCCTTCTTCTTTGTCTCAAAATTGGTTGCAC 140
Query 121 CCTGTTTTCTTGAGCTTCCGTGGGGAAGATGTCCGCAAAGGCTTGCTCAGTCACATTCAG 180
||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 141 CCTGTCTTCTTGAGTTTCCGTGGGGAAGATGTCCGCAAAGGCTTTCTCAGTCACATTCAG 200
Query 181 AAGGAGTTTCAAAGAAACGGAATCACACCGTTCATTGATAATGAGATGAAGAGAGGAGGA 240
||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||
Sbjct 201 AAGGAGTTTCAAAGAAAGGGTATCACACCATTCATTGATAATGAGATGAAGAGAGGAGGA 260
Query 241 TCCATTGGTCCTGAGCTCTTACAGGCTATTAGAGGATCTAAGATCGCGATCATCTTGCTT 300
|||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct 261 TCCATTGGTCCTGAGCTCTTACAGGCAATTCGAGGATCTAAGATCGCGATCATCTTGCTC 320
Query 301 TCGAGGAACTATGGTTCTTCGAAGTGGTGTCTTGATGAATTGGTGGAGATTATGAAATGC 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 321 TCGAGGAACTATGGTTCTTCGAAGTGGTGTCTTGATGAATTGGTGGAGATTATGAAATGC 380
Query 361 AGAGAAGAGTTGGGTCAAACAGTGATGACCGTTTTTTATGATGTGGATCCATCTGATGTG 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 381 AGAGAAGAGTTGGGTCAAACAGTGATGACCGTTTTTTATGATGTGGATCCATCTGATGTG 440
Query 421 AGGAAGCAGAAGGGAGATTTTGGGAAGGTTTTTaaaaaaaCTTGTGTTGGAAGACCAGAG 480
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 441 AGGAAGCAGAAGGGAGATTTTGGGAAGGTTTTTAGAAAAACTTGTGTTGGAAGACCAGAG 500
Query 481 GAGATGGTA-CAGAGATGGAAGCAAGCTTTGACCAGCGCTGCAAATATACTCGGGGAGGA 539
||| || | |||| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 501 GAGGTGA-AGCAGAAATGGAAGCAAGCTTTGACCAGTGCTGCAAATATACTCGGGGAGGA 559
Query 540 TTCTCGCAACTGGGAAAACGAAGCGGATATGATCATTAAAATCTCAAAAGATGTCTCCGA 599
|||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||
Sbjct 560 TTCTCGCAACTGGGAAAATGAAGCAGATATGATCATTAAAATAGCAAAAGATGTCTCCGA 619
Query 600 TGTGTTGAGTTTTACGCCATCAAAGGATTTTGATGAGTTTGTTGGCATTGAAGCTCATAC 659
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 620 TGTGTTGAGTTTTACACCATCAAAGGATTTTGATGAGTTTGTTGGCATTGAAGCTCATAC 679
Query 660 GACGGAGATAACTTCGTTGTTACAACTTGATCTGGAAGAAGTGAGAATGATAGGGATTTG 719
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 680 GACAGAGATAACTTCGTTGTTACAACTTGATCTGGAAGAAGTGAGAATGATAGGGATTTG 739
Query 720 GGGTCCTGCTGGTATTGGCAAGACGACCATCTCCAGAGTTCTATATAACAAACTCTTTCA 779
|||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||| ||
Sbjct 740 GGGTCCTGCTGGAATTGGCAAGACTACCATCTCCAGGGTTCTATATAACAAACTCTTCCA 799
Query 780 TCAGTTCCAACTGGGCGCAATCATTGACAACATCAAAGTACGTTATCCAAGACCTTGTCA 839
||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 800 TCAATTCCAACTGGGCGCAATCATTGACAACATTAAAGTACGTTATCCAAGACCTTGTCA 859
Query 840 CGATGAGTACAGTGCAAAGCTGCAGTTACAGAAAGAATTGTTGTCTCAGATGATTAACCA 899
|||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct 860 CGATGAGTACAGCGCAAAACTGCAATTACAGAAAGAATTGTTGTCTCAGATGATTAACCA 919
Query 900 GAAAGATATGGTGGTTCCTCATTTAGGTGTTGCCCAAGAGAGGTTGAAGGACAAGAAAGT 959
||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct 920 GAAAGATATGGTGGTTCCTCATTTAGGGGTTGCCCAAGAGAGGTTGAAGGACAGGAAAGT 979
Query 960 TCTTCTAGTTCTTGATGACGTCGATGGGTTAGTACAACTTGATGCCATGGCGAAAGATGT 1019
|||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct 980 TCTTCTAGTTCTTGATGACGTCGATGCGCTAGTACAACTTGATGCCATGGCGAAAGATGT 1039
Query 1020 ACAATGGTTTGGCCTTGGAAGTCGCATTATTGTCGTAACTCAAGATCTAAAACTTTTAAA 1079
|| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct 1040 ACGATGGTTTGGCCTTGGAAGTCGCATTATCGTCGTAACACAAGATCTAAAACTTTTAAA 1099
Query 1080 AGCTCATGGGATCAAGTATATTTACAAAGTTGATTTTCCAACTTCTGATGAGGCTCTTGA 1139
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 1100 AGCTCATGGGATCAAGTATATTTACAAGGTTGATTTTCCAACTTCTGATGAGGCTCTAGA 1159
Query 1140 AATCTTCTGCATGTATGCTTTTGGTGAGAAGTCCCCTAAAGTTGGTTTTGAGCAGATTGC 1199
||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1160 AATATTCTGCATGTATGCTTTTGGTCAGAAGTCCCCTAAAGTTGGTTTTGAGCAGATTGC 1219
Query 1200 TCGGACGGTTACAACACTTGCTGGTAAACTCCCGTTAGGACTAAGGGTTATGGGATCATA 1259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1220 TCGGACGGTTACAACACTTGCTGGTAAACTCCCGTTAGGACTAAGGGTTATGGGATCCTA 1279
Query 1260 TTTACGGCGAATGTCGAAGCAGGAGTGGGCGAAATCAATACCAAGGCTAAGGACCAGCCT 1319
|||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||
Sbjct 1280 TTTACGGCGAATGTCGAAGCAGGAGTGGGCGAGATCAATACCAAGGTTAAGAACCAGCCT 1339
Query 1320 TGACGATGATATTGAGAGCGTTTTGAAGTTCAGTTACAACTCCTTAGCTGAACAAGAGAA 1379
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||
Sbjct 1340 TGACGATGATATTGAGAGCGTTTTGAAGTTCAGTTACAACTCCTTAGCTGCAGAAGAAAA 1399
Query 1380 AGATTTATTTCTTCACATAACCTGTTTTTTCAGAAGGGAAAGGATTGAGACATTGGAAGT 1439
||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||
Sbjct 1400 AGATTTATTTCTTCACATAGCCTGTTTTTTTAGAAGGGAAAGGATTGAGACTTTGGAAGT 1459
Query 1440 ATTTCTTGCAAAGAAGTCTGTAGATATGAGGCAAGGGCTCCAAATCTTGGCAGATAAATC 1499
|||||||||||||||| ||| ||| |||||||||||||||||||||| || ||||||||
Sbjct 1460 GTTTCTTGCAAAGAAGTTTGTGGATGTGAGGCAAGGGCTCCAAATCTTAGCCGATAAATC 1519
Query 1500 TCTCTTATCTTTGAACTTGGGAAATATAGAGATGCATAATTTGCTAGTACAACTAGGCCT 1559
|||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1520 TCTCTTGTCTATGAACTTGGGAAATATAGAGATGCATAATTTGCTAGTACAACTAGGTCT 1579
Query 1560 AGACATTGTTCGTAAGCAATCTATTCATAAGCCTGGGAAACGTCAGTTCTTGGTTGATAC 1619
||||||| ||||||| ||||| |||||||||||||||||||||||||| ||||||||| |
Sbjct 1580 AGACATTATTCGTAAACAATCCATTCATAAGCCTGGGAAACGTCAGTTTTTGGTTGATGC 1639
Query 1620 TGAAGATATTTGTGAAGTACTCACTGATGATACGGGTACCAGAACTCTTATAGGCATAGA 1679
|||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||| ||
Sbjct 1640 TGAAGATATTTGTGAAGTACTCACCGATGATACAGGTACCAGAACTCTTGTAGGCATTGA 1699
Query 1680 TCTTGAGTTATCTGGTGTAATCGAGGGCGTAATAAATATTAGTGAAAGAGCCTTTGAAAG 1739
||| ||||||||||||||||||||||| || |||||||| ||||||||||||||||||||
Sbjct 1700 TCTCGAGTTATCTGGTGTAATCGAGGGTGTGATAAATATAAGTGAAAGAGCCTTTGAAAG 1759
Query 1740 AATGTGCAATCTCCAGTTCTTAAGATTCCACCATCCATATGGTGATCGTTGTCACGACAT 1799
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1760 AATGTGCAATCTCCAGTTCTTAAGATTCCACCACCCATATGGTGATCGTTGTCACGACAT 1819
Query 1800 ATTGTACTTACCGCAAGGTTTGAGCCATATATCTCGAAAACTTAGACTACTTCATTGGGA 1859
|||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct 1820 ATTGTACTTACCGCAAGGTTTGAGCCATATATCTCGAAAACTTAGATTACTACATTGGGA 1879
Query 1860 ACGTTATCCACTGACATGTTTGCCTCCCAAGTTTAATCCGGAGTTCCTTGTCAAAATAAA 1919
||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct 1880 ACGTTATCCACTGACATGTTTGCCTTCCAAGTTTAATCCTGAGTTCCTTGTCAAAATAAA 1939
Query 1920 CATGCGAGACAGCATGCTCGAGAAGCTGTGGGACGGAAATGAACCCATTAGAAACCTCAA 1979
|||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||
Sbjct 1940 CATGCGAGACAGCATGCTTGAGAAGCTGTGGGAAGGAAATGAACCCATTAGAAATCTCAA 1999
Query 1980 ATGGATGGATTTGAGTTTTTGTGTAAACCTGAAGGAGCTTCCTGATTTCTCTACTGCCAC 2039
||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2000 ATGGATGGATTTGAGTTCTTGTGTAAACCTGAAGGAGCTGCCTGATTTCTCTACTGCCAC 2059
Query 2040 TAATCTCCAAGAATTGAGACTCATAAATTGTTTAAGCTTGGTGGAGCTTCCCTCTTCCAT 2099
||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct 2060 TAATCTCCAAGAATTGAGACTCATAGATTGTTTAAGCTTGGTGGAGCTCCCCTCTTCCAT 2119
Query 2100 TGGGAATGCCACTAATTTACTGGAATTGGATCTTATTGATTGCTCAAGTCTGGTGAAACT 2159
||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct 2120 CGGGAATGTCACTAATTTACTGGAATTGGATCTTATTGGTTGCTCTAGTCTGGTGAAACT 2179
Query 2160 CCCCTCCTCTATTGGGAATCTCACAAATCTAAAAAAGTTGTTTCTCAATAGATGTTCGAG 2219
||||||||||||||||||||| || ||||| |||||||||| ||||||||||||||||||
Sbjct 2180 CCCCTCCTCTATTGGGAATCTTACGAATCTTAAAAAGTTGTATCTCAATAGATGTTCGAG 2239
Query 2220 TTTGGTGAAACTCCCTTCCTCTTTTGGGAATGTCACTAGTCTCAAGGAGTTAAATCTCAG 2279
||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2240 TTTGGTGAAACTCCCCTCCTCTATTGGGAATGTCACTAGTCTCAAGGAGTTAAATCTCAG 2299
Query 2280 TGGTTGTTCAAGTCT-TCTGGAGATCCCCTCTTCCATCGGGAATATTGTTAACCTCAAGA 2338
||||||||| ||||| | ||||||| ||||||||||||||||||| |||||||||||
Sbjct 2300 TGGTTGTTCGAGTCTGT-TGGAGATTCCCTCTTCCATCGGGAATACCACTAACCTCAAGA 2358
Query 2339 AAGTATATGCTGATGGATGTTCAAGTCTGGTGCAACTCCCTTCCTCTATTGGAAATAACA 2398
|| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||
Sbjct 2359 AATTATATGCTGATGGATGTTCAAGTCTGGTGGAACTCCCTTCCTCTATTGGAAATATCA 2418
Query 2399 CTAATCTCAAGGAATTGCATCTACTGAATTGCTCGAGTTTGATGGAATGCCCTTCTTCTA 2458
||||||||| ||||||||| ||| ||||||| ||||||||||| |||| ||| |||||||
Sbjct 2419 CTAATCTCAGGGAATTGCAACTAATGAATTGTTCGAGTTTGATTGAATTCCCCTCTTCTA 2478
Query 2459 TGTTAAATTTAACTCGTCTCGAAGATTTGAATCTCAGTGGATGCTTAAGTCTGGTGAAGC 2518
| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2479 TTTTAAAGTTAACTCGTCTCGAAGATTTGAATCTCAGTGGATGCTCAAGTCTGGTGAAGC 2538
Query 2519 TCCCCTCTATTGGGAATGTTATTAATCTCCAATCATTGTATCTCAGTG-ATTGCTCAAGT 2577
|||| ||||||||||||||||||||||||||| |||||| |||||||| || ||||||||
Sbjct 2539 TCCCTTCTATTGGGAATGTTATTAATCTCCAAACATTGTTTCTCAGTGGAT-GCTCAAGT 2597
Query 2578 CTAATGGAACTCCCCTTCACTATTGAGAATGCCACTAATCTCGATACATTGTATCTTGAT 2637
|| |||||||||||||| |||||||||| |||||||||||| | |||||||||||| ||
Sbjct 2598 CTGGTGGAACTCCCCTTCTCTATTGAGAACGCCACTAATCTCCAGACATTGTATCTTAAT 2657
Query 2638 GGATGCTC-GAATCTACTGGAGCTTCCCTCATCTATTTGGAATATCACTAATCTCCAATC 2696
|||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2658 GGATGCTCAGA-TCTACTGGAGCTCCCCTCATCTATTTGGAATATCACTAATCTCCAATC 2716
Query 2697 ATTGTATCTAAACGGATGCTCAAGTCTAAAGGAGCTCCCTTCCTTGGTTGAGAATGCCAT 2756
||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct 2717 ATTGTATCTTAACGGATGCTCAAGTCTAAAAGAGCTCCCTTCCTTGGTTGGGAATGCCAT 2776
Query 2757 TAATCTTCAAAGTTTGTCTCTTATGAAATGTTCAAGTTTGGTAGAGCTCCCTTCCTCCAT 2816
|||||| |||||||||||||||||||| ||||||||| |||| |||||||||||||||||
Sbjct 2777 TAATCTCCAAAGTTTGTCTCTTATGAATTGTTCAAGTATGGTGGAGCTCCCTTCCTCCAT 2836
Query 2817 CTGGAGAAT-C-AGTAATCTCTCATACTTAGATGTCAGTAACTGCTCTAGTTTGCTAGAG 2874
||||| | | | | |||||||||||||||||||||||||| || ||||||||| |||||
Sbjct 2837 CTGGA-A-TGCCACTAATCTCTCATACTTAGATGTCAGTAGTTGTTCTAGTTTGGTAGAG 2894
Query 2875 CTCAATCTT 2883
|||||||||
Sbjct 2895 CTCAATCTT 2903
Score = 782 bits (423), Expect = 0.0
Identities = 483/512 (94%), Gaps = 4/512 (1%)
Strand=Plus/Plus
Query 2881 CTTGTCTCGCACCCCGTGGTTCCAGATTCCCTAATCCTAGATGCAGGAGATTGTGAGTCT 2940
|||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct 2931 CTTGTCTCGCACCCGGTGGTTCCAGATTCCCTAATCCTTGATGCAGGAGATTATGAGTCT 2990
Query 2941 CTGGTGCAGAGACTAGATTGCTTCTTTCAAAATCCAAAGATTGTTCTCAACTTCGCTAAC 3000
| |||| |||||||||| |||| |||||||||||| ||||||||||||||||||||||||
Sbjct 2991 CCGGTGGAGAGACTAGACTGCTCCTTTCAAAATCCGAAGATTGTTCTCAACTTCGCTAAC 3050
Query 3001 TGCTTCAAACTGAATCAAGAAGCAAGAGATCTCATCATCCAGACATCGGCTTGTAGAAAT 3060
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 3051 TGCTTCAAACTGAATCAAGAAGCAAGAGATCTCATCATCCAGACATCTACTTGTAGAAAT 3110
Query 3061 GCGATATTACCAGGTGAAAAAGTGCCTGCATACTTCACGTACCGCGCTACTGGTGATTCT 3120
|||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||
Sbjct 3111 GCGATATTACCAGGTGGAAAAGTGCCTGCATACTTCACTTACCGAGCTACTGGTGATTCT 3170
Query 3121 TTAACAGTGAAGTTGAACCAGAAGTATCTTCTTCAATCTTTGAGATTTAAAGCTTGCCTT 3180
||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||
Sbjct 3171 CTAACAGTGAAGTTGAACGAGAGGTATCTTCTTAAATCTTTGAGATTTAAAGCTTGCCTC 3230
Query 3181 TTGCTAGTTGAGGGTCAAAACAAATGGCCAAATTGGGGGATGAATCTAGTAACTTCTCGA 3240
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct 3231 TTGCTAGTTGAGGGTCAAAACAAATGGCCACATTGGGGGATGAATATAGTAACTTCTCGA 3290
Query 3241 GAACCAGATGGAC-ACATTGTTCTGTACACACCAAGCAGCCATCTTCAAGGTCCACTTTT 3299
|||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3291 GAACCAAATGG-CTACATTGTTCTGTACACACCAAGCAGCCATCTTCAAGGTCCACTTTT 3349
Query 3300 AATGGAGAATCTGTATACATTCGAATTTGAACTAGTGGTGACTTCCAGTGAGTTCGTTTT 3359
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
Sbjct 3350 AATGGAGAATCTGTATACATTTGAATTTGAACTAGTGGTGACTTCCAGTGAGTTCGTTGT 3409
Query 3360 GGAGTTCAGAG-CTGATCGTTACAAGTGTGCG 3390
||||||||||| | || || ||||||||||||
Sbjct 3410 GGAGTTCAGAGTC-GACCGCTACAAGTGTGCG 3440
Score = 209 bits (113), Expect = 9e-53
Identities = 557/762 (73%), Gaps = 68/762 (9%)
Strand=Plus/Plus
Query 2078 TGGTGGAGCTTCCCTCTTCCATTGGGAATGC-CACTAAT-TTACTGGAA-TTGGATCT-T 2133
||||| | || ||||| || ||||||||| | || ||| ||| || ||| ||||
Sbjct 2170 TGGTGAAACTCCCCTCCTCTATTGGGAAT-CTTACGAATCTTA--AAAAGTTGTATCTCA 2226
Query 2134 ATTGATTGCTCAAGTCTGGTGAAACTCCCCTCCTCTATTGGGAATCTCACAAATCTAAAA 2193
|| || || || ||| ||||||||||||||||||||||||||||| |||| | ||| ||
Sbjct 2227 ATAGA-TGTTCGAGTTTGGTGAAACTCCCCTCCTCTATTGGGAATGTCACTAGTCTCAAG 2285
Query 2194 AAGTTGTTTCTCAATAGATGTTCGAGTTTGGTGAA-ACTCCCTTCCTCTTTTGGGAATGT 2252
|||| ||||| | | ||||||||| || || | | ||||| | || | ||||||
Sbjct 2286 GAGTTAAATCTCAGTGGTTGTTCGAGTCTGTTGGAGATTCCCT-CTTCCATCGGGAATAC 2344
Query 2253 CACTAGTCTCAAGGAGTTAAAT-CTCAGTGGTTGTTCAAGTCTTCTGGAGA-TCCCCTCT 2310
||||| |||||| | ||| || || | ||| ||||||||||| |||| | |||| ||
Sbjct 2345 CACTAACCTCAAGAAATTATATGCTGA-TGGATGTTCAAGTCTGGTGGA-ACTCCCTTCC 2402
Query 2311 TCCATCGGGAATATTGTTAACCTCAAGAAAGTATATGCTGATGGAT-GTTCAAGTCTGGT 2369
|| || || ||||| ||| |||| | || | | || ||| || |||| ||| || |
Sbjct 2403 TCTATTGGAAATATCACTAATCTCAGGGAATTGCAA-CTAATGAATTGTTCGAGTTTGAT 2461
Query 2370 -GCAACTCCCTTCCTCTATTGGAAA-TAACACTAATCTC-AAGGAATTGCATCT-ACTGA 2425
| || |||| || |||||| ||| | | ||| |||| ||| | ||| |||| | ||
Sbjct 2462 TG-AATTCCCCTCTTCTATTTTAAAGTTA-ACTCGTCTCGAAG-ATTTGAATCTCAGTGG 2518
Query 2426 ATTGCTCGAGTTTGATGGAATGC-CCTTCTTCTAT-GTTAAAT-TTAACTCGTCTCGAAG 2482
|| |||| ||| || || || || || ||||||| | || | ||| | |||| ||
Sbjct 2519 AT-GCTCAAGTCTGGTG-AA-GCTCC--CTTCTATTGGGAA-TGTTAT-TAATCTCCAAA 2571
Query 2483 -ATTTGAATCTCAGTGGATGCTTAAGTCTGGTG-AAGCTCCCCT-CT--ATTGGGAATGT 2537
||| | |||||||||||||| |||||||||| || ||||||| || |||| ||| |
Sbjct 2572 CATT-GTTTCTCAGTGGATGCTCAAGTCTGGTGGAA-CTCCCCTTCTCTATTGAGAACGC 2629
Query 2538 TATTAATCTCCA-ATCATTGTATCTCAGTG-ATTGCTCA-AGTCTAATGGAACTCCCCTT 2594
| ||||||||| | |||||||||| | || || ||||| | |||| |||| |||||||
Sbjct 2630 CACTAATCTCCAGA-CATTGTATCTTAATGGAT-GCTCAGA-TCTACTGGAGCTCCCCT- 2685
Query 2595 CA-CTATT-GAGAATGCCACTAATCTCGA-TACATTGTATCTTGATGGATGCTCGAA-TC 2650
|| ||||| | |||| |||||||||| | | ||||||||||| | |||||||| || ||
Sbjct 2686 CATCTATTTG-GAATATCACTAATCTCCAAT-CATTGTATCTTAACGGATGCTC-AAGTC 2742
Query 2651 TACTGGAGCTTCCCT-CATCTATTTGG-AATATCACTAATCTCCAATCATTGTATCTAAA 2708
|| ||||| |||| | | | |||| ||| || |||||||||| |||| ||| |
Sbjct 2743 TAAAAGAGCT-CCCTTCCT-TGGTTGGGAATGCCATTAATCTCCAAAGTTTGTCTCTTAT 2800
Query 2709 CGGAT-GCTCAAGTCTAAAGGAGCTCCCTTCCTTGGT-TGAGAATGCCATTAATCT-TCA 2765
| || | |||||| | |||||||||||||| | || |||||||| |||||| |||
Sbjct 2801 -GAATTGTTCAAGTATGGTGGAGCTCCCTTCCTCCATCTG-GAATGCCACTAATCTCTCA 2858
Query 2766 AAGTTTG-TCTCTTATGAAAT-GTTCAAGTTTGGTAGAGCTC 2805
| || | | || | | | | |||| |||||||||||||||
Sbjct 2859 TACTTAGATGTC--A-GTAGTTGTTCTAGTTTGGTAGAGCTC 2897
> Ahg891936 jgi|Araly1|891936|Al_scaffold_0007_3922
Length=3162
Score = 619 bits (335), Expect = 4e-176
Identities = 1419/1921 (74%), Gaps = 160/1921 (8%)
Strand=Plus/Plus
Query 65 cttcttctctatcttc-ttcatctcccccttcttcttTGTCTCAAAATTGGTTGCACCCT 123
|||||||| |||| || ||||||| | || ||||||||||||| |||| || ||| |
Sbjct 131 CTTCTTCTTTATC-TCTTTCATCTACTCCATCTTCTTTGTCTCGAAATCGGAAACACGAT 189
Query 124 GTTTTCTTGAGCTTCCGTGGGGAAGATGTCCGCAAAGGCTTGCTCAG-TCACATTC-AGA 181
|| ||| ||||||| |||| |||||| |||||| ||| || | |||||| | | |
Sbjct 190 GTCTTCCCCAGCTTCCACGGGGCAGATGTTCGCAAAAACTTTCT-TGCTCACATCCTA-A 247
Query 182 AGGAGTTTCAAA-GAAACGGAATCACACCGTTCATTGATAATGAGATGAAGAGAGGAG-G 239
| ||| |||||| |||| |||||| || |||||||||||||| || ||||||||
Sbjct 248 AAGAG-TTCAAAGGAAAGGGAATCGTTCCATTCATTGATAATGATAT--CGAGAGGAGCA 304
Query 240 A-TCCATTGGTCCTGAGCTCTTACAGGCTATTAGAGGATCTAAGATCGCGATCATCTTGC 298
| || || |||||||||||| || | ||||| | |||||| |||||||||||| ||||||
Sbjct 305 AGTCTATCGGTCCTGAGCTCATAGAAGCTATAAAAGGATCGAAGATCGCGATCGTCTTGC 364
Query 299 TTTCGAGGAACTATGGTTCTTCGAAGTGGTGTCTT-GATGAATTGGTGGAGATTATGAAA 357
| ||||||||||| | ||||||| ||||| ||| | || ||||||||||| |||||
Sbjct 365 TCTCGAGGAACTACGCTTCTTCGTCTTGGTG-CTTAAACGAGTTGGTGGAGATCATGAAT 423
Query 358 TGCAGAGAAGAGTTGGGTCAAACAGTGATGACCGTTTTTTATGATGTGGATCCATCTGAT 417
|| |||||||||||||||||||||||||||||| |||| ||||| || |||||| | ||
Sbjct 424 TGTAGAGAAGAGTTGGGTCAAACAGTGATGACCATTTTCTATGACGTTGATCCAACAGAC 483
Query 418 GTGAGGAAGCAGA-AGGGAGATTTTGGGAAGGTTTTTaaaaaaaCTTGTGTTGG-AAGAC 475
|| | |||||||| ||| ||||||||||||||| || || ||||| ||| || || ||
Sbjct 484 GTAAAGAAGCAGACAGG-AGATTTTGGGAAGGTCTTCAAGAAAACGTGTAAAGGTAAAAC 542
Query 476 CA--GAGGAGATGGTACAGAGATGG-AAGCAA-GCTTTGACCAGCGCTG---CAA-ATAT 527
|| ||||| || || |||||||| || || | |||| || |||| ||| | ||
Sbjct 543 CAAAGAGGACAT--TA-AGAGATGGCAA--AACGTTTTGG--AG-GCTGTGGCAACA-AT 593
Query 528 A-CTCGGGGAGGATTC-TCGCAACTGGGAAAACGAAGCGGATATGA-TCATTAAAATCTC 584
|| |||||| |||| | | |||||||| || ||||| | |||| | | |||||| |
Sbjct 594 CGCT-GGGGAGCATTCCT-GTAACTGGGATAATGAAGCAGCCATGACTGAA-AAAATCGC 650
Query 585 AAAAGATGTCTCCGATGTGTTGAGTTT-TACGC-CA-TCAA-AGGATTTTGATGAGTTTG 640
| ||||| || | |||||| | ||| | | |||| || ||||||| | ||||
Sbjct 651 CACTGATGTTTCAAACATGTTGAATAGATACTCACCGTCAAGAG-ATTTTGACG-GTTTC 708
Query 641 -TTGGCATTGAAGCTCATACGA-CGGAGAT--AACTTCGTTGTTACAACTTGA-TCTGGA 695
|||| || | ||||||| || || | || || | |||||||| || || |||| |
Sbjct 709 ATTGGGATGGGGGCTCATATGAACGAA-ATGGAA-T-CGTTGTTATGCCTAGACTCTG-A 764
Query 696 AGAAGTGAGAATGATAGGGATTTGGGGTCC-TGCTGGTATTGGCAAGACGACCATCT-CC 753
||||| || ||||| |||||||||||||| | |||| || || ||||| ||||| | ||
Sbjct 765 TGAAGTAAGGATGATTGGGATTTGGGGTCCGT-CTGGGATAGGGAAGACTACCAT-TGCC 822
Query 754 AGAGTTCT-ATATAA-CAAACTCTTTC--ATCAGTTCCAACTGGGCG-CAATCATTGACA 808
||||| || ||||| ||| | |||| | | || || || | | |||| || |
Sbjct 823 AGAGT-CTTATATAGTCAA--T-TTTCTGAAAATTTTGAATTGAGTATCT-TCATGGAGA 877
Query 809 ACATCAAAGTAC-G-T-TATCCAAGACC--T-TGT-CACGATGAGTACAGTGCAAAGCTG 861
| ||||| | | | | ||| ||||||| | ||| | |||||||| ||||||||| |
Sbjct 878 ATATCAAGGAATTGATGTATACAAGACCAGTGTGTTCT-GATGAGTATAGTGCAAAGATT 936
Query 862 CAGTTACAGAAAGAATTGTTGTCTCAGATGATTAACCAGAAAGATATGGTGGTTCCTCAT 921
||||||||| || | || ||||| || || || ||||| || ||||||| | ||||||||
Sbjct 937 CAGTTACAGCAACAGTTTTTGTCCCAAATAATCAACCACAAGGATATGGAGCTTCCTCAT 996
Query 922 TTAGGTGTTGCCCAAGAGAGGTTGAAGGACAAGAAAGTTCTTCTAGTTCTTGAT-GACGT 980
||||| ||||| ||||| |||||||| ||||||| || ||| | ||||||||| | | |
Sbjct 997 TTAGGAGTTGCACAAGATAGGTTGAACGACAAGAGGGTGCTTATTGTTCTTGATAG-CAT 1055
Query 981 CGATGGGTTAGTACAACTTGATGCCATGGCGAAAGATG-TACAATGGTTTGGCCTTGGAA 1039
||| | | ||||||| ||||| || || ||||| | | ||||| || | |||||
Sbjct 1056 TGATCAATCAATACAACTAGATGCTATCGCAAAAGAAACT-CGGTGGTTCGGTCATGGAA 1114
Query 1040 GTCGCATTATTGTCGTAACTCAAGATCTAAAA-CTTTTAAAAGCTCATGGGATCAAGTAT 1098
|||| ||||| || ||| ||||| | || ||||| || || ||||| ||||| ||
Sbjct 1115 GTCGGATTATCATCACAACACAAGACC-AACGGCTTTTGAAGGCACATGGCATCAACCAT 1173
Query 1099 ATTTACAAAGTTGATTTTCCAACTTC-TGATGAGGCTCT-TGAAATCTTCTGCATGTATG 1156
|||||||| || || |||||| | | | |||| ||| | | | ||||| || |||||||
Sbjct 1174 ATTTACAAGGTGGAGTTTCCATCAGCAT-ATGAAGCT-TATCAGATCTTTTGTATGTATG 1231
Query 1157 CTTTTGGTGAGAAGTCCCCTAAAGTTGGTTTTGAGCAGATTGC-TCGG-ACGGTTACAAC 1214
||||||| | || | |||||||| |||||||||| || |||| | || | | ||||||
Sbjct 1232 CTTTTGGCCAAAACTTCCCTAAAGATGGTTTTGAGGAGCTTGCGT-GGCAAG-TTACAAA 1289
Query 1215 ACTTGCT-GGTAAACTCCCGTTAGGACTAAGGGTTATGGGATCATATTTACG-GCGAATG 1272
|||| | ||||| || || || |||||||| ||||||||||| | || || | |||||
Sbjct 1290 ACTTT-TAGGTAATCTACCTTTGGGACTAAGAGTTATGGGATCCCACTTCCGAG-GAATG 1347
Query 1273 TCGAAGCAGGAGTGGGCGAAAT-CAATACCAAGGCTAAGGAC-CAGCCTTGACGAT-GAT 1329
|| | ||| ||||||| |||| || |||||||| ||| || | ||||||| | | | |
Sbjct 1348 TCTAGGCATGAGTGGGT-AAATGCATTACCAAGGTTAAAGATTC-GCCTTGATGCTAG-T 1404
Query 1330 ATTGAGAGCGTTTTGAAGTTCAGTTACAACT-CCTTA-GCTGAACAAGAGAAAGATTTAT 1387
||| | ||| |||| |||||||||||| | | ||||| | ||| |||| ||||||||||
Sbjct 1405 ATTCAAAGCATTTTAAAGTTCAGTTACGA-TGCCTTATG-TGATGAAGATAAAGATTTAT 1462
Query 1388 TTCTTCACATAACCTGTTTTTTCAG-AAGGGAAAGGATTGAGACATTGGAAGTATT-TCT 1445
| ||||| ||| |||| |||||| || | | ||| || | | | ||| ||| |||
Sbjct 1463 TCCTTCATATAGCCTGCCTTTTCAACAATG-AC-GGAATG-G---T-GAAAG-ATTATCT 1514
Query 1446 TGCAAAGAAGTCTGT-AGATATGAGGCAAGGGCTCCAAATCTTGGCAGATAAATCTCTCT 1504
||| |||| | | |||| ||||||||||||| || |||| || || |||||||||
Sbjct 1515 TGCTTT-AAGTTTCTTAGATGTGAGGCAAGGGCTTCACCTCTTAGCTGAGAAATCTCTCA 1573
Query 1505 TATCTTT-GA-ACTTG----G--GA--A-A----TATAGAGATGCATAATTTGCTAGTAC 1549
|| | || || | || | || | | |||| ||||||| ||| | |||| |
Sbjct 1574 TAGCATTAGAGATTTTTTCTGCTGACTATACACATATAAAGATGCACAATCTATTAGTGC 1633
Query 1550 AACTAGGCCTAGACATTGTTCGT-A-A-GC------A--A-TCTATTCATAAGCCTGGGA 1597
|| |||| ||||||||| ||| | | || | | || ||| | ||||||||
Sbjct 1634 AATTAGGTAGAGACATTGTCCGTCATAAGCCTGGGCACCAATCCATTTGTGCGCCTGGGA 1693
Query 1598 AACGTCAGTTCTTGGTTGATACT-GAAGATATTTGTGAAGTACTCACTGATGATACGGGT 1656
| ||||| || ||||||||| || || |||||||||||||||||||||||| | ||||||
Sbjct 1694 AGCGTCAATTTTTGGTTGATGCTAGA-GATATTTGTGAAGTACTCACTGATAACACGGGT 1752
Query 1657 ACCAGAACTCTTATAGGCATAGATCTT-GAGTTATCTGGTGTAATCGAGGGCGTAAT-AA 1714
| |||| | ||||||| ||| | || ||| ||| | || || ||| || ||| ||
Sbjct 1753 AGTAGAAATGTTATAGGTATACTT-TTCGAGGTATATACCCTA-TC-AGG-CG-AATTAA 1807
Query 1715 ATATTAGTGAAAGAGCCTTTGAAAGAATGTGC-AATCTCCAGTTCTTAAGATTCCACCAT 1773
|||| ||||| ||||| |||||| |||||| | || ||| ||||||||||||||||
Sbjct 1808 ATATCAGTGAGAGAGCTTTTGAAGGAATGT-CTAACCTCAAGTTCTTAAGATTCCATGGC 1866
Query 1774 CCATATGGTGATCGTTGTCACGACATATTGTACTTACCGCAAGGTTTGAGCCATATATCT 1833
||||||| | | | | || | |||||||||||||||||| |||| || || ||
Sbjct 1867 CCATATGACGGCCAAAG-C--GATAAATTGTACTTACCGCAAGGGTTGAATAATCTACCT 1923
Query 1834 CGAAAACTTAGACTACTTCATTGGGAACG-TTATCCACTGACATGTTTGCCTCCCAAGTT 1892
|| ||||||||| |||| | ||| | | || |||| ||| |||||||||| |||| ||
Sbjct 1924 CGGAAACTTAGAATACTAGAATGG-AGCCATTTTCCAATGAAATGTTTGCCTTCCAATTT 1982
Query 1893 T 1893
|
Sbjct 1983 T 1983
> Ahg891930 jgi|Araly1|891930|Al_scaffold_0007_3916
Length=2952
Score = 579 bits (313), Expect = 6e-164
Identities = 1419/1930 (74%), Gaps = 168/1930 (9%)
Strand=Plus/Plus
Query 63 ttcttcttctctatct-tcttcatctcccccttcttcttTGTCTCAAAATTGGTTGCACC 121
||||||| || ||||| | ||||||| | || ||||||||||||| |||| || |||
Sbjct 132 TTCTTCTACTTTATCTAT-TTCATCTACTCCATCTTCTTTGTCTCGAAATCGGAAACACG 190
Query 122 CTGTTTTCTTGAGCTTCCGTGGGGAAGATGTCCGCAAAGGC-TTGCTCAG-TCACATTC- 178
||| ||| ||||||| |||| |||||| | ||| | || || | |||||| |
Sbjct 191 ATGTCTTCCCAAGCTTCCACGGGGCAGATGTTAG-AAAAACATTTCT-TGCTCACATCCT 248
Query 179 AGAAGGAGTTTCAAA-GAAACGGAATCACACCGTTCATTGATAATGAGATGAAGAGAGGA 237
| || ||| |||||| |||| |||||| || |||||||||||||| || |||||||
Sbjct 249 A-AAAGAG-TTCAAAGGAAAGGGAATCGTTCCATTCATTGATAATGATAT--CGAGAGGA 304
Query 238 G-GA-TCCATTGGTCCTGAGCTCTTACAGGCTATTAGAGGATCTAAGATCGCGATCATCT 295
| | || || |||||||||||| || | ||||| | |||||| |||||||||||| |||
Sbjct 305 GCAAGTCTATCGGTCCTGAGCTCATAGAAGCTATAAAAGGATCGAAGATCGCGATCGTCT 364
Query 296 TGCTTTCGAGGAACTATGGTTCTTCGAAGTGGTGTCTT-GATGAATTGGTGGAGATTATG 354
|||| ||||||||||| | ||||||| ||||| ||| | || ||||||||||| |||
Sbjct 365 TGCTCTCGAGGAACTACGCTTCTTCGTCTTGGTG-CTTAAACGAGTTGGTGGAGATCATG 423
Query 355 AAATGCAGAGAAGAGTTGGGTCAAACAGTGATGACCGTTTTTTATGATGTGGATCCATCT 414
|| || |||||||||||||||||||||||||||||| |||| ||||| || |||||| |
Sbjct 424 AATTGTAGAGAAGAGTTGGGTCAAACAGTGATGACCATTTTCTATGACGTTGATCCAACA 483
Query 415 GATGTGAGGAAGCAGA-AGGGAGATTTTGGGAAGGTTTTTaaaaaaaCTTGTGTTGG-AA 472
|| || | |||||||| ||| ||||||||||||||| || || ||||| ||| || ||
Sbjct 484 GACGTAAAGAAGCAGACAGG-AGATTTTGGGAAGGTCTTCAAGAAAACGTGTAAAGGTAA 542
Query 473 GACCA--GAGGAGATGGTACAGAGATGG-AAGCAA-GCTTTGACCAGCGCTG---CAA-A 524
|||| ||||| || || |||||||| || || | |||| || |||| ||| |
Sbjct 543 AACCAAAGAGGACAT--TA-AGAGATGGCAA--AACGTTTTGG--AG-GCTGTGGCAACA 594
Query 525 TATA-CTCGGGGAGGATTCTCGCAACTGGGAAAACGAAGCGGATATGA-TCATTAAAATC 582
|| || |||||| |||| || |||||||| || ||||| | |||| | | ||||||
Sbjct 595 -ATCGCT-GGGGAGCATTCCCGTAACTGGGATAATGAAGCAGCCATGACTAAA-AAAATC 651
Query 583 TCAAAAGATGTCTCCGATGTGTTGAGTTT-TACGC-CA-TCAA-AGGATTTTGATGAGTT 638
| | ||||| || | || ||| | ||| | | |||| || ||||||| | |||
Sbjct 652 GCCACTGATGTTTCAAACATGCTGAATAGATACTCACCGTCAAGAG-ATTTTGACG-GTT 709
Query 639 TG-TTGGCATTGAAGCTCATACGA-CGGAGATA-ACTTCGTTGTTACAACTTGA-TCTGG 694
| |||| || | ||||||| || || | || | | |||||||| || || ||||
Sbjct 710 TCATTGGGATGGGGGCTCATATGAACGAA-ATGGAGT-CGTTGTTATGCCTAGACTCTG- 766
Query 695 AAGAAGTGAGAATGATAGGGATTTGGGGTCC-TGCTGGTATTGGCAAGACGACCATCT-C 752
| ||||| || ||||| |||||||||||||| | |||| || || ||||| ||||| | |
Sbjct 767 ATGAAGTAAGGATGATTGGGATTTGGGGTCCAT-CTGGGATAGGGAAGACTACCAT-TGC 824
Query 753 CAGAGTTCTA-TATAACAAACTCTTTCATCA--GTTCC-AACTGGGCG-CAATCATTGAC 807
|||||| || |||| | || | |||| | | ||| || || | | |||| ||
Sbjct 825 CAGAGT-CTTGTATAGCCAA-T-TTTC-TGAAAGTTTTGAATTGAGTATCT-TCATGGAG 879
Query 808 AACATCAAAGTA-C-G-T-TATCCAAGACC--T-TGT-CACGATGAGTACAGTGCAAAGC 859
|| ||||||| | | | | ||| ||||||| | ||| | |||||||| |||||||||
Sbjct 880 AATATCAAAG-AGCTGATGTATACAAGACCAGTGTGTTCT-GATGAGTATAGTGCAAAGA 937
Query 860 TGCAGTTACAGAAAGAATTGTTGTCTCAGATGATTAACCAGAAAGATATGGTGGTTCCTC 919
| ||||||||| || | || ||||| || || || ||||| || ||||||| | ||||||
Sbjct 938 TTCAGTTACAGCAACAGTTTTTGTCCCAAATAATCAACCACAAGGATATGGAGCTTCCTC 997
Query 920 ATTTAGGTGTTGCCCAAGAGAGGTTGAAGGACAAGAAAGTTCTTCTAGTTCTTGAT-GAC 978
||||||| ||||| ||||| |||||||| ||||||| ||| ||| | ||||||||| | |
Sbjct 998 ATTTAGGAGTTGCACAAGATAGGTTGAACGACAAGAGAGTGCTTATTGTTCTTGATAG-C 1056
Query 979 GTCGATGGGTTAGTACAACTTGATGCCATGGCGAAAGATG-TACAATGGTTTGGCCTTGG 1037
| ||| | | ||||||| ||||| || || ||||| | | ||||| || | |||
Sbjct 1057 ATTGATCAATCAATACAACTAGATGCTATCGCAAAAGAAACT-CGGTGGTTCGGTCATGG 1115
Query 1038 AAGTCGCATTATTGTCGTAACTCAAGATCTAAAA-CTTTTAAAAGCTCATGGGATCAAGT 1096
|||||| ||||| || ||| ||||| | ||| ||||| || || ||||| |||||
Sbjct 1116 AAGTCGGATTATCATCACAACACAAGACC-AAAGGCTTTTGAAGGCACATGGCATCAACC 1174
Query 1097 ATATTTACAAAGTTGATTTTCCAACTTC-TGATGAGGCTCT-TGAAATCTTCTGCATGTA 1154
|||||||||| || || |||||| | | | |||| ||| | | | ||||| || |||||
Sbjct 1175 ATATTTACAAGGTGGAGTTTCCATCAGCAT-ATGAAGCT-TATCAGATCTTTTGTATGTA 1232
Query 1155 TGCTTTTGGTGAGAAGTCCCCTAAAGTTGGTTTTGAGCAGATTGC-TCGG-ACGGTTACA 1212
||||||||| | || | |||||||| |||||||||| || |||| | || | | |||||
Sbjct 1233 TGCTTTTGGCCAAAACTTCCCTAAAGATGGTTTTGAGGAGCTTGCGT-GGCAAG-TTACA 1290
Query 1213 ACACTTGCT-GGTAAACTCCCGTTAGGACTAAGGGTTATGGGATCATATTTACG-GCGAA 1270
| |||| | ||||| || || || |||||||| ||||||||||| | || || | |||
Sbjct 1291 AAACTTT-TAGGTAATCTACCTTTGGGACTAAGAGTTATGGGATCCCACTTCCGAG-GAA 1348
Query 1271 TGTCGAAGCAGGAGTGGGCGAAAT-CAATACCAAGGCTAAGGAC-CAGCCTTGACGAT-G 1327
|| | | ||| ||||||| |||| || |||||||| ||| || | ||||||| | | |
Sbjct 1349 TGCCTAGGCATGAGTGGGT-AAATGCATTACCAAGGTTAAAGATTC-GCCTTGATGCTAG 1406
Query 1328 ATATTGAGAGCGTTTTGAAGTTCAGTTACAACT-CCTTA-GCTGAACAAGAGAAAGATTT 1385
|||| | ||| |||| |||||||||||| | | ||||| | ||| |||| ||||||||
Sbjct 1407 -TATTCAAAGCATTTTAAAGTTCAGTTACGA-TGCCTTATG-TGATGAAGATAAAGATTT 1463
Query 1386 ATTTCTTCACATAACCTGTTTTTTCAG-AAGG--GAAA-GGATTGAGACATTGGAAGTAT 1441
||||||||| ||| |||| |||||| || | |||| || | || | | |||||| ||
Sbjct 1464 ATTTCTTCATATAGCCTGCCTTTTCAACAATGAAGAAATGG-T-GA-A-AGTGGAAG-AT 1518
Query 1442 T-TCTTGCAAAGAAGTCTGT-AGATATGAGGCAAGGGCTCCAAATCTTGGCAGATAAATC 1499
| ||| || |||| | | |||| | ||||||||||| || |||| || || |||||
Sbjct 1519 TATCTCGCTTT-AAGTTTCTTAGATGTTAGGCAAGGGCTTCACCTCTTAGCTGAGAAATC 1577
Query 1500 TCTCTTATCT-TTGA-A--CTTGGGA--AAT-ATAGA-G-AT---G---CATAATTTGCT 1544
|||| || || |||| | ||| | || ||| | | || | || ||| | |
Sbjct 1578 TCTCATAGCTATTGAGATTCTTTCTACTAACCATACAAGTATAAAGGTGCACAATCTATT 1637
Query 1545 AGTACAACTAGGCCTAGACATTGTTCGT-A-A-GC------A--A-T-CTATTCATAAGC 1591
||| ||| |||| ||||||||| ||| | | || | | | | |||| | |||
Sbjct 1638 AGTGCAATTAGGTAGAGACATTGTCCGTCATAAGCCTGGGCACCAATGC-ATTCGTGAGC 1696
Query 1592 CTGGGAAACGTCAGTTCTTGGTTGATACT-GAAGATATTTGTGAAGTACTCACTGATGAT 1650
||||||| ||||| || ||||||||| || || |||||||||||||||||||||||| |
Sbjct 1697 CTGGGAAGCGTCAATTTTTGGTTGATGCTAGA-GATATTTGTGAAGTACTCACTGATAAC 1755
Query 1651 ACGGGTACCAGAACTCTTATAGGCATAGATCTTG-AGTTATCTGGTGTAATCGAGGGCGT 1709
||||||| |||| | ||||||| ||| | ||| || || || || ||| |
Sbjct 1756 ACGGGTAGTAGAAATGTTATAGGTATACTT-TTGGAGGTAGAAAACCTA-TC-AGGCC-- 1810
Query 1710 AAT-AAATATTAGTGAAAGAGCCTTT-GAAAGAATGTGC-AATC-TCCAGTTCTTAAGAT 1765
||| |||||| ||||| |||| ||| ||| |||||| | || | | | ||||||||||
Sbjct 1811 AATTAAATATCAGTGAGAGAGG-TTTCGAAGGAATGT-CTAACCATAAA-TTCTTAAGAT 1867
Query 1766 TCCACCATCCATATGGTGATCGTTGTCA-CGACATATTGTACTTACCGCAAGGTTTGAGC 1824
|||| ||||||| | || | | ||| | |||||||||||||||||||||||
Sbjct 1868 TCCATGGCCCATATGAAG---GT-GAAAACGATAAATTGTACTTACCGCAAGGTTTGAAT 1923
Query 1825 CATATATCTCGAAAACTTAGACTACTTCATTGGGAACGTTATCC-ACTGACATGTTTGCC 1883
|| || |||| ||||||||| || | | ||| |||| ||| | ||| | |||||||
Sbjct 1924 AATCTACCTCGGAAACTTAGAATAATAGAATGGTTTCGTTTTCCGA-TGAAAAGTTTGCC 1982
Query 1884 TCCCAAGTTT 1893
| |||| |||
Sbjct 1983 TTCCAATTTT 1992
> Ahg887641 jgi|Araly1|887641|Al_scaffold_0020_1
Length=3669
Score = 366 bits (198), Expect = 5e-100
Identities = 631/833 (76%), Gaps = 57/833 (7%)
Strand=Plus/Plus
Query 67 tcttctctatcttcttcatctcccccttcttcttTGTCTCAAAAT-TGGTTGCACCCTGT 125
|||||||| ||| ||||||||| | || |||||| || || ||| |||| |||
Sbjct 136 TCTTCTCTGTCTCCTTCATCTCTTCAATCGTCTTTGGATC-GCATCTGGACACACCATGT 194
Query 126 -TTTCTTGAGCTTCCGTGGGGAAGATGTCCGCAAAGGCTTGCTCAGTCACATTCAGAAGG 184
|||| || ||||| |||||||||||||| | || ||| || ||||||||||||| ||
Sbjct 195 GTTTC-CAAGTTTCCGAGGGGAAGATGTCCGTAGAGACTTTCTTAGTCACATTCAGATGG 253
Query 185 AGTTTCAAAGAAACGGAATCACACCGTTCATTGATAATGAGATGAAGAGAGGAGGATCCA 244
|||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct 254 AGTTTCAAAGAATGGGAATCACACCGTTCATTGATAATGAGATCAAGAGAGGACAATCCA 313
Query 245 TTGGTCCTGAGCTC-TTAC-AGGCTATTAGAGGATCTAAGATCGCGATCATCTTGCTTTC 302
| |||||||| ||| || | || | ||||||| ||| |||||||| || |||||||| ||
Sbjct 314 TCGGTCCTGAACTCATT-CGAG-CAATTAGAGAATCCAAGATCGCAATTATCTTGCTGTC 371
Query 303 GAGGAACTATGGTTCTTCGAAG-TGGTGTCTTGATGAATTGGTGGAGATTATGAAATGCA 361
|| ||||| | |||||||| | ||||||||||| ||||||| |||||||||||| ||||
Sbjct 372 AAGAAACTACGCTTCTTCGA-GCTGGTGTCTTGACGAATTGGCGGAGATTATGAAGTGCA 430
Query 362 GAGAAGAGTTGGGTCAAACAGTGATGACCGTTTTTTATGATGTGGATCCATCTGATGTGA 421
| ||||| |||||||||||||| || | ||||| ||| | ||||||||||||||||| |
Sbjct 431 GGGAAGAATTGGGTCAAACAGTTTTGGCTGTTTTCTATAAAGTGGATCCATCTGATGTAA 490
Query 422 GGAAGCAGAAGGGAGATTTTGGGAAGGTTTTTaaaaaaaCTTGTGTTGG-AAGACCAGAG 480
||||| || ||||||||||| || || || |||||||| |||| || || || | ||
Sbjct 491 AGAAGCTGACCGGAGATTTTGGAAAAGTCTTCAAAAAAACATGTGCCGGTAAAACAAAAG 550
Query 481 GAG-ATGGTACAGAGATGGA-AGCAAGCTTTGACCAGCG-CTGCAA-ATATACTCGGGG- 535
|| | | | |||||||| | ||||||||| | | | | || | | || | | ||
Sbjct 551 -AGCACGTTGG-GAGATGGAGA-CAAGCTTTGGCAAATGTC-GCCACA-AT-CGCTGGTT 604
Query 536 AGGATTCT-CGCAACTGGGAAAACGAAGCGGATATGATCATTAAAATCTCAAAAGATGTC 594
| |||| | ||||||||| || ||||||| ||||| | |||||| | | ||| |
Sbjct 605 ACCATTCGAC-CAACTGGGATAATGAAGCGGCCATGATTAAAAAAATCGCTACTGATATT 663
Query 595 TCCGATGT-GTTGAGTT-TTAC-GC--CATCAAAG-GATTTTGATGAGTTTG-TTGGCAT 647
|| || ||||| | || | || |||||| | ||||| ||| || || |||| ||
Sbjct 664 TC-GAACACGTTGAATAATT-CTGCATCATCAA-GTGATTTCGAT-AGGCTGGTTGGAAT 719
Query 648 TGA-AGCTCAT--ACGACGGAGAT--AACTTCGTTGTTACAACTT-GA-TCTGGAAGAAG 700
|| || ||| | || | |||| ||| |||| ||| || || || | | ||||
Sbjct 720 -GAGAGAACATTTA-GA-GAAGATGGAAC--CGTTATTATGT-TTAGACTCAG-ATGAAG 772
Query 701 TGAGAATGATAGGGATTTGGGGTCCTGCTGGTATTGGCAAGACGACCATCTCCAGAGTTC 760
|||| |||| ||||||||||||||| |||| ||||| |||||||||||| ||||||||
Sbjct 773 TGAGGCTGATTGGGATTTGGGGTCCTTCTGGGATTGGGAAGACGACCATCGCCAGAGTTA 832
Query 761 TATATAACAAACTCTTTCATCAGTTC-CAACTGGGCG-CAATCATTGACAAC-ATCAAAG 817
|||| |||||||||| | ||||| |||||| | | | | || || | | ||| |||
Sbjct 833 TATACAACAAACTCTC-CGGCAGTTTTCAACTGAGTGTCTTT-ATGGA-ATCTATCGAAG 889
Query 818 TACGTTATCCAAGACCTTGT-CACGATGAGTACAGTGCAAAGCTGCAGTTACA 869
| ||| ||||||| ||| | |||||| || ||||| ||| ||||||||||
Sbjct 890 CAAAATATACAAGACCATGTTC-CGATGACTATAGTGCCAAGTTGCAGTTACA 941
> Ahg905841 jgi|Araly1|905841|Al_scaffold_0003_2969
Length=2022
Score = 111 bits (60), Expect = 3e-23
Identities = 196/260 (75%), Gaps = 16/260 (6%)
Strand=Plus/Plus
Query 2923 GCAGGAGATTGTGAGTCTCTGGT-GCAGAGACTAGATTGCTTCTTTCAAAATCCAAAGAT 2981
|||| | ||||||||||| | | | |||||||| ||| || || || |||||| | ||
Sbjct 1744 GCAGAAAATTGTGAGTCT-T--TAG-AGAGACTATATTCCTCCTGCCACAATCCATATAT 1799
Query 2982 -TGTTCTCAACTTCGCTAACTGCTTCAAACTGAATCAAGAAGCAAGAGATCTCATCATCC 3040
| ||||||||| | ||| ||||| ||||| ||||||||||||||||||||||||||||
Sbjct 1800 CAG-TCTCAACTTTGATAATTGCTTTAAACTAAATCAAGAAGCAAGAGATCTCATCATCC 1858
Query 3041 AGACATCGGCTTGTAGAAATGCGATATTACCAGGTGAAAA-AGTGCCTGCATACTTCACG 3099
|||||||| || | | | || | ||||| |||| | | | | ||| | ||||||||
Sbjct 1859 AGACATCGACTC--A-ACTTACGGTCTTACCCGGTGGAGATA-TACCTACCTACTTCACT 1914
Query 3100 TACCGCGCTACTGGTGATTCTTTAACAGTGAAGTTGAACCAGAAGTATCTTCT-T-CAAT 3157
|| || |||| ||| | |||| || ||||||||| || ||| | | |||| | |||
Sbjct 1915 TATCGAGCTAGTGGAGGTTCTCTAGTAGTGAAGTTAAAGGAGAGGCCT-TTCTGTTCAAC 1973
Query 3158 CTTTGAGATTTAAAGCTTGC 3177
||| || |||||| | ||||
Sbjct 1974 CTT-GATATTTAAGGTTTGC 1992
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 134609635701
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5