BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G44530.1
Length=2864
Score E
Sequences producing significant alignments: (Bits) Value
Ahg494534 jgi|Araly1|494534|fgenesh2_kg.8__350__AT5G44530.1 4372 0.0
Ahg354710 jgi|Araly1|354710|fgenesh1_pg.C_scaffold_7001883 1738 0.0
Ahg890123 jgi|Araly1|890123|Al_scaffold_0007_2109 795 0.0
> Ahg494534 jgi|Araly1|494534|fgenesh2_kg.8__350__AT5G44530.1
Length=2867
Score = 4372 bits (2367), Expect = 0.0
Identities = 2717/2883 (94%), Gaps = 35/2883 (1%)
Strand=Plus/Plus
Query 1 ACTCTTCTTTCACCGACCTCCTTACACCAAAAAGGTGTCAATTCCACTTGTTCACCATGA 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1 ACTCTTCTTTCACCGACCTCC-GACACCAAAAAGGTGTCAATTCCACTTGTTCACCATG- 58
Query 61 ATATGATTTAATGGGTTCTTCTTCTTTTGCAGCTTTCTTTCTTTTCCTTAAATTATCATT 120
| ||| |||||||| ||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct 59 AGATGCTTTAATGGCTTCTTCTTCTTTTGCAGCTTTCTTTATTTTCCTTAAATTATCTTT 118
Query 121 GTTTTAGGT-GGGGTTTTAAGTGCTTTCATGACTCATTCATTCTCTGTATAAAACCTAGT 179
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 119 GTTTTAGGTGGGGGTTTTAAGTGCTTTCATGACTCATTCATTCTCTGTATAAAACCTAGT 178
Query 180 GGAAAGTGTTAAATCAAAAACCCTTTTTTCCCACTTTCTTAATTTAGAAGGGAGACGaaa 239
||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct 179 GGAAAGTGTTAAATC-AAAACCCTTTTTTCCCACTTTCTTAATTTAGAAGGGAGAC-AAA 236
Query 240 -aaaaTGGTTAGAGTAATGTTGGTGAGGTTTGGGTTTTTATTACTTA-TGATCTC-TTTT 296
||||||| ||||| |||||||||| ||||||||||||||||| || ||||||| ||||
Sbjct 237 CAAAATGGGAAGAGTTATGTTGGTGAAGTTTGGGTTTTTATTAC-TAGTGATCTCTTTTT 295
Query 297 GTGTTTTTGTCTAATAACACTTTGGGACAACAACAAGACGATGATGATGATTCTGCTGTG 356
| ||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||
Sbjct 296 G-GTTTTTGTCTAATAACATTTTGGGACAACAACAAGATGAGGATGATGATTCTGCTGTG 354
Query 357 TACATTGTCACACTTAAACAACCTCCTATTGTCCATCTCTTTGAAGAACAAGAGCTTAAA 416
|||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct 355 TACATTGTCACACTTAAAGAACCTCCTATTGTTCATCTCTTTGAAGAACAAGAGCTTAAA 414
Query 417 CACAAAAAGTC-AAAGTTTACACCAAAATTGCGACCAAGGAACAATTCAAGGAAACGTCA 475
|| |||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct 415 CAAAAAAAGTCTAAA-TTTACACCAAAATTGAAACCAAGGAACAATTCAAGGAAACGTCA 473
Query 476 TGGGAAGTCAAAGATACCATCTGTTGTTCAATCTCATGACTCTTTCTTGAGAAAGAC-TC 534
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 474 TGGGAAGTCAAAGATACCATCTGTTGCTCAATCTCATGACTCTTTCTTGAGAAAGACAT- 532
Query 535 TAAAAGGAGAGAAGTATATAAAGCTTTATAGTTACCATTATCTTATCAATGGATTTGCTC 594
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 533 TAAAAGGAGAGAAGTATATAAAGCTTTATAGTTACCATTATCTAATCAATGGATTTGCTC 592
Query 595 TGTTTATTAACTCACAACAGGCTGAGAAGCTTTCAATGAGAAAAGAAGTAGCAAACATAG 654
||||| ||| ||||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct 593 TGTTTGTTAGCTCACAACAGGCTGAGAAGCTGTCAATGAGAAGAGAAGTAGCAAACATAG 652
Query 655 TGTTGGATTACTCTGTTAGGACAGCAACAACTTATACTCCACAGTTTATGGGTTTACCAC 714
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 653 TGTTGGATTACTCTGTTAGGACAGCAACAACTTATACCCCACAGTTTATGGGTTTACCAC 712
Query 715 AAGGAGCATGGGTCAAAGAAGGTGGATTTGAGATTGCTGGAGAAGGAGTTATAATCGGTT 774
||||||||||||||||||||||||||| ||||||||||||||||||| || | ||||| |
Sbjct 713 AAGGAGCATGGGTCAAAGAAGGTGGATATGAGATTGCTGGAGAAGGAATTGTTATCGGGT 772
Query 775 TTATCGATACTGGGATCGATCCGAATCATCCTAGTTTCAATGACAATGACTCTAAGCGTT 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 773 TTATCGATACTGGGATCGATCCGAATCATCCTAGTTTCAATGACAATGACTCTAAGCGTT 832
Query 835 CATATCCAATCCCTAAGCATTTCTCAGGTGTTTGTGAAGTTACACCGGATTTTCCATCAG 894
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 833 CATATCCAATCCCTAAGCATTTCTCAGGTGTTTGTGAAGTTACACCGGATTTTCCTTCAG 892
Query 895 GATCTTGCAATAAGAAGCTTATTGGAG-CACGGCATTTCGCGCAATCCGCTGTAACCAGA 953
||||||||||||||||||| ||||||| || | |||||||||||||||||||||||||||
Sbjct 893 GATCTTGCAATAAGAAGCTAATTGGAGCCA-GACATTTCGCGCAATCCGCTGTAACCAGA 951
Query 954 GGAATCTTTAACTCATCTGAAGATTACGCTTCTCCTTTCGATGGAGATGGACATGGAACA 1013
||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 952 GGAATTTTTAACTCATCTGAAGAATACGCTTCTCCTTTCGATGGAGATGGACATGGAACA 1011
Query 1014 CACACAGCTTCGGTTGCAGCGGGTAACCACGGAGTTCCAGTGATAGTTTCTAACCATAAC 1073
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1012 CACACAGCTTCAGTTGCAGCGGGTAACCACGGAGTTCCAGTGATAGTTTCTAACCATAAC 1071
Query 1074 TTTGGATACGCTAGTGGAATCGCTCCTCGTGCATTTATTTCTGTTTACAAGGCATTGTAT 1133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1072 TTTGGATACGCTAGTGGAATCGCTCCTCGTGCATTTATTTCTGTTTACAAGGCATTGTAT 1131
Query 1134 AAGAGTTTTGGAGGTTTTGCTGCAGATGTTGTAGCAGCTATAGATCAGGCAGCTCAAGAT 1193
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1132 AAGAGTTTTGGAGGTTTTGCTGCAGATGTTGTTGCAGCTATAGATCAGGCAGCTCAAGAT 1191
Query 1194 GGAGTAGATATATTAAGCCTATCAATTACACCGAATCGGAAACCTCCCGGTGTTGCCACT 1253
||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||
Sbjct 1192 GGAGTAGATATATTAAGTCTATCAATTACACCGAATCGAAAACCTCCTGGTGTTGCCACT 1251
Query 1254 TTCTTTAATCCTATCGACATGGCATTACTTTCCGCTGTAAAAGCCGGAATCTTCGTAGTC 1313
||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||
Sbjct 1252 TTCTTTAATCCTATCGATATGGCATTACTTTCCGCTGTAAAAGCCGGAATTTTTGTAGTC 1311
Query 1314 CAAGCTGCGGGAAATACCGGTCCAGCGCCTAAAACCATGTCTTCTTTTAGTCCTTGGATA 1373
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1312 CAAGCTGCGGGAAATACCGGTCCAGCGCCTAAAAGCATGTCTTCTTTTAGTCCTTGGATT 1371
Query 1374 TTCACCGTTGGTGCTTCTTCTCATGATAGAGTTTACTCTAATTCTTTAACCTTAGGAAAC 1433
||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct 1372 TTCACAGTTGGTGCTTCTTCTCATGATAGAGTTTACTCCAATTCTTTAATTTTAGGAAAC 1431
Query 1434 AATGTAACTATTCCAGGCATGGGATTCGCAATTCCTACAGAT-AGTGGAAAAATGTACAA 1492
||||||||||||| |||||| ||||||||||||||||| ||| | |||||| ||||||||
Sbjct 1432 AATGTAACTATTCAAGGCATTGGATTCGCAATTCCTACGGATGA-TGGAAAGATGTACAA 1490
Query 1493 GATGATATCTGCTTTTCATGCCTTGAACAATAGTACTTCTGTAGATAAAGATATGTATGT 1552
|||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct 1491 GATGATCTCTGCTTTTCATGCCTTGAACAAAAGTACTTCTGTAGATAGAGATATGTATGT 1550
Query 1553 AGGTGAATGTCAAGATTATGAAAACTTCGATCAAGATCGTGTCTCAGGGAAACTTTTGAT 1612
|||||||||||||||||||||||||| ||||||||||| |||||| ||||| ||| ||||
Sbjct 1551 AGGTGAATGTCAAGATTATGAAAACTACGATCAAGATCTTGTCTCGGGGAATCTTCTGAT 1610
Query 1613 ATGTAGCTACTCTGCTCGTTTTGTTCTCGGGCTTTCGACTATAAAACAAGCTTTAGATGT 1672
|||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct 1611 ATGTAGCTACTCTGCTCGTTTTATTCTCGGGATTTCGACTATAAAACAAGCTTTAGATGT 1670
Query 1673 TGCCAAGAATCTATCCGCGACTGGTGTGATATTCTATATAGACCCGTATGTTCTTGGTTT 1732
||||||||||||||| |||| ||| ||| |||||||||||||||||||||||||||||||
Sbjct 1671 TGCCAAGAATCTATCTGCGATTGGCGTGGTATTCTATATAGACCCGTATGTTCTTGGTTT 1730
Query 1733 TGAGATCAATCCAACACCGATGGATATGCCCGGGATCATAATTCCATCTGTAGAAGATTC 1792
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1731 TGAGATCAATCCAACACCGATGGATATGCCCGGAATCATAATTCCATCTGTAGAAGATTC 1790
Query 1793 CAAG---ACTTTACTCAAGTACTATAACTCTTCTATTCAAAGAGATGTAACCACTAAAGA 1849
||| | ||||||||| ||||||||||||||| |||||||||||| |||||| |||||
Sbjct 1791 TAAGGTGATTTTACTCAAATACTATAACTCTTCTCTTCAAAGAGATGGAACCACCAAAGA 1850
Query 1850 AATTGTTAGTTTTGGAGCGGTTGCAGCCATAGAAGGCGGTTTAAATGCTAACTTTAGTAA 1909
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||
Sbjct 1851 AATTGTTAGTTTTGGAGCGGTTGCAGCCATTGAAGGCGGTTTAAATGCTAACTTCAATAA 1910
Query 1910 CAGAGCTCCTAAGGTAATGTATTACTCAGCAAGAGGACCTGATCCTGAAGACAACTCTTT 1969
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1911 TAGAGCTCCCAAGGTAATGTATTACTCAGCAAGAGGACCTGATCCTGAAGACAACTCTTT 1970
Query 1970 TAACGACGCAGACGTATTAAAACCGAACCTCGTAGCACCTGGAAACTCTATTTGGGGTGC 2029
||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1971 TAACGACGCAGACATATTAAAACCGAACCTCGTAGCTCCTGGAAACTCTATTTGGGGTGC 2030
Query 2030 TTGGAGTTCTGCTTCAACGGATTCTACCGAGTTTGAAGGTGAGAAATTTGCGATGATGTC 2089
||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2031 TTGGAGTTCTGTTTCAACCGATTCTACCGAGTTTGAAGGTGAGAAATTTGCGATGATGTC 2090
Query 2090 CGGTACAAGTATGGCTGCTCCTCATGTAGCTGGTGTGGCTGCATTAATCAAACAAAGTTA 2149
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2091 CGGTACAAGTATGGCTGCTCCTCATGTAGCTGGTGTGGCTGCATTAATCAAACAAACTTA 2150
Query 2150 TCCACAGTTTACTCCTTCAACAA-TCT-CATCCGCGCTTTCAACAACGGCTCTCCTAAAT 2207
||||| |||||||||||| ||| | | |||| |||||||||||||| || || || |||
Sbjct 2151 CCCACAATTTACTCCTTCA-CAAAT-TGCATCTGCGCTTTCAACAACTGCGCTTCTTAAT 2208
Query 2208 GATAATAAAGGCAGTCCGATAATGGCTCAGCGAACTTATTCCAATCCCGATCAAAGCCTC 2267
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2209 GATAATAAAGGCGGTCCGATAATGGCTCAGCGAACTTATTCCAATCCCGATCAAAGCCTC 2268
Query 2268 TATACCGCAACACCGTCTGATATGGGGAGCGGTTTTGTTAACGCAACGGCAGCTTTAGAC 2327
|||||||||||||||| ||||||||| |||||||| ||||| ||||| ||||||||||||
Sbjct 2269 TATACCGCAACACCGTTTGATATGGGAAGCGGTTTCGTTAATGCAACCGCAGCTTTAGAC 2328
Query 2328 CCTGGTCTAGTTTTTGATACAAGTTTTGAAGATTATATATCATTTCTTTGTGGGATCAAC 2387
||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2329 CCTGGTCTAGTATTCGATACAAGTTTTGAAGATTATATGTCATTTCTTTGTGGGATCAAC 2388
Query 2388 GGCTCGGATACGGTGGTATTCAACTACACCGGATTCCGCTGTCCCGCTAACAACACACCA 2447
||||||||| || |||||||||||||||||||||| |||||| || |||| |||||| ||
Sbjct 2389 GGCTCGGATCCGTTGGTATTCAACTACACCGGATTTCGCTGTTCCACTAAAAACACAACA 2448
Query 2448 GTCAGTGGTTTTGACCTCAATTTGCCATCAATTACAGTATCGACACTTAGTGGCACACAA 2507
||| ||||||||||||||||||||| ||||||||||| || |||||||||||||| |||
Sbjct 2449 ATCAATGGTTTTGACCTCAATTTGCCGTCAATTACAGTTTCAACACTTAGTGGCACGCAA 2508
Query 2508 ACTTTCCAAAGATCGATGAGAAACATAGCCGGCAATGAGACATACAATGTTGGTTGGAGT 2567
| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2509 ATTTTCCAAAGATCAATGAGAAACATAGCCGGAAATGAGACATACAATGTTGGTTGGAGT 2568
Query 2568 CCTCCTTATGGTGTTTCAATGAAAGTATCACCTACTCAATTTTCTATTGCTATGGGAGAA 2627
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 2569 CCTCCTTATGGTGTTTCAATGAAAGTATCACCTACTCAATTTTCTATAGCGATGGGAGAA 2628
Query 2628 AATCAAGTACTTAGCGTAACCCTCACGGTGACAAAGAACAGTTCCAGTTCTAGTTTTGGC 2687
| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2629 ACTCAAGTACTTAGCGTAACCCTCACGGCAACAAAGAACAGTTCCAGTTCTAGTTTTGGT 2688
Query 2688 AGAATCGGATTGTTTGGAAATACAGGACACATTGTTAATATTCCTGTAACTGTCATAGCG 2747
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2689 AGACTCGGATTGTTTGGAAATACAGGACACATTGTTAATATTCCTGTAACTGTCATAGCG 2748
Query 2748 AAAATCGCTTCGAGCTGATGATAGATAATTTTTCTTT-TACCATTCAATTGTTAAAG-GT 2805
||||||||||||||||||||| | || |||||| || | |||||||||||||||| ||
Sbjct 2749 AAAATCGCTTCGAGCTGATGA-ATATC-TTTTTCGTTAT-CCATTCAATTGTTAAAACGT 2805
Query 2806 ACATTTTTTATTTGATGCAATGTAAAACCATATAATT-AAGT-AA-A-CTCTAATCTTCA 2861
|||||||| |||||||||||| |||||||||| || | |||| || | ||| ||||||||
Sbjct 2806 ACATTTTT-ATTTGATGCAATTTAAAACCATAGAAATGAAGTCAAGAACTCCAATCTTCA 2864
Query 2862 AGC 2864
|||
Sbjct 2865 AGC 2867
> Ahg354710 jgi|Araly1|354710|fgenesh1_pg.C_scaffold_7001883
Length=2574
Score = 1738 bits (941), Expect = 0.0
Identities = 1918/2383 (80%), Gaps = 93/2383 (4%)
Strand=Plus/Plus
Query 429 AAGTTTAC---ACCAAAATTGCGACCAAGGAACAATTCAAGGAAACGTCATGGGAAG-TC 484
|||||||| ||||||| | | ||||||||||| ||||| | |||| || || || ||
Sbjct 226 AAGTTTACTAGACCAAAACTCCAACCAAGGAACATTTCAAAGTCACGTTATTGG-AGATC 284
Query 485 AAAGAT-ACCATCTGTTGTTCAATCTCATGACTCTTTCTTGAGAAA-GAC-TCTAAAAGG 541
||| | |||| | ||| |||| ||||||||||||| |||||||| | | | | || ||
Sbjct 285 -AAGGTGACCAGCAATTGCTCAAGCTCATGACTCTTTGTTGAGAAATG-CAT-TGAAGGG 341
Query 542 AGAGAAGTATATAAAGCTTTATAG-TTACCATTATCTTATCAATGGATTTGCTCTGTTTA 600
|||||||||||||||||||||||| || ||||||||| |||||||| |||||| | |||
Sbjct 342 AGAGAAGTATATAAAGCTTTATAGCTT-CCATTATCTCATCAATGGTTTTGCTGTCTTTG 400
Query 601 TTAACTCACAACAGGCTGAGAAGCTTTCAATGAGAAAAGAAGTAGCAAACATAGTGTTGG 660
||| ||||||||||||||||||||| |||| |||| ||||||||||||||||||||||
Sbjct 401 TTAGCTCACAACAGGCTGAGAAGCTGTCAAGGAGAGGGGAAGTAGCAAACATAGTGTTGG 460
Query 661 ATTACTCTGTTAGGACAGCAACAACTTATACTCCACAGTTTATGGGTTTACCACAAGGAG 720
||| |||||||| || |||||||||||||| || ||||| |||||| ||||| |||| |
Sbjct 461 ATTTTTCTGTTAGAACGGCAACAACTTATACACCTCAGTTCATGGGTCTACCAAAAGGTG 520
Query 721 CATGGGTCAAAGAAGGTGGATTTGAGATTGCTGGAGAAGGAGTTATAATCGGTTTTATCG 780
||||||| ||||||||||||||||| | ||||||||||||| || | ||||| |||||||
Sbjct 521 CATGGGTTAAAGAAGGTGGATTTGAAACTGCTGGAGAAGGAATTGTTATCGGGTTTATCG 580
Query 781 ATACTGGGATCGATCCGAA-TCATCCTAGTTTCAATGACAATG--AC-TCTAAGCGTTCA 836
| ||||| || || || || ||| ||||||||||||| || || || || |||| |||
Sbjct 581 ACACTGGCATTGA-CCCAACTCACCCTAGTTTCAATGGCACTGACACTTCCCAGCG-TCA 638
Query 837 -TATCCAATCCCTAAGCATTTCTCAGGTGTTTGTGAAGTTACACCGGATTTTCCATCAGG 895
||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 639 GTATCCGATCCCTAATCATTTCTCAGGTGTTTGTGAAGTTACACCGGATTTTCCATCGGG 698
Query 896 ATCTTGCAATAAGAAGCTTATTGGAGCACGGCATTTCGCGCAATCCGCTGTAACCAGAGG 955
|| |||| || ||||||| ||||||| || ||||||||||| || ||| | || |||||
Sbjct 699 CTCGTGCAGTAGGAAGCTTGTTGGAGCCCGCCATTTCGCGCAGTCAGCTATTACTAGAGG 758
Query 956 AATCTTT-AACTCATCTGAAGATTACGCTTCTCCTTTCGATGGAGATGGACATGGAACAC 1014
|| ||| || |||||||| || || ||||| ||||| || || ||||| ||||| || |
Sbjct 759 CAT-TTTCAATTCATCTGAGGACTATGCTTCACCTTTTGACGGCGATGGCCATGGCACGC 817
Query 1015 ACACAGCTTCGGTTGCAGCGGGTAACCACGGAGT-TCCAGT-GATAGTTTCTAACCATAA 1072
|||||||||| | |||||||||||||| || || || || | |||||||| |||||
Sbjct 818 ACACAGCTTCCATCGCAGCGGGTAACCATGGGGTCTC-AGCAG-TAGTTTCTGGTCATAA 875
Query 1073 CTTTGGATAC-GCTAGTGGAATCGCTCCTCGTGCATTTATTTCTGTTTACAAGGCATTGT 1131
||||||| | |||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct 876 CTTTGGA-AGTGCTAGTGGAATCGCTCCTCGTGCACATATTTCTGTTTACAAGGCATTAT 934
Query 1132 ATAAGAGTTTTGGAGGTTTTGCTGCAGATGTTGTAGCAGCTATAGATCAGGCAGCTCAAG 1191
||||||||||||| || ||||||||||||||||| || ||||||||||||||||||||||
Sbjct 935 ATAAGAGTTTTGGGGGATTTGCTGCAGATGTTGTTGCTGCTATAGATCAGGCAGCTCAAG 994
Query 1192 ATGGAGTAGATATATTAAGCCTATCAATTACACCGAATCGGAAA-CCTCCCGGTGTTGCC 1250
||||||| || |||||||| ||||| || ||||| ||||| | ||||| ||||| |||
Sbjct 995 ATGGAGTTGACATATTAAGTCTATCCATCACACCAAATCG-ACGTCCTCCTGGTGTAGCC 1053
Query 1251 ACTTTCTTTAATCCTATC-GACATGGC-ATTACTTTCCGCTGTAAAAGCCGGAATCTTCG 1308
|| |||||||| || || || ||||| || || |||||||| || || || || ||||
Sbjct 1054 ACGTTCTTTAACCC-ATTAGATATGGCTATG-CTATCCGCTGTTAAGGCTGGTATATTCG 1111
Query 1309 TAGTCCAAGCTGCGGGAAATACCGGTCCAGCGCCTAAAACCATGTCTTCTTTTAGTCCTT 1368
| || |||||||| ||||| || ||||| | ||||| | |||||| || || || || |
Sbjct 1112 TTGTGCAAGCTGCAGGAAACACAGGTCCCTCTCCTAAGAGCATGTCCTCCTTCAGCCCAT 1171
Query 1369 GGATATTCACCGTTGGTGCTTCTTCTCATGATAGAGTTTACTCTAATTCTTTAAC-CTTA 1427
|||| ||||| ||||||||| || |||| ||| |||||||||||||||| ||| || |
Sbjct 1172 GGATTTTCACAGTTGGTGCTGCTACTCACGATCGAGTTTACTCTAATTCGATAATTCT-A 1230
Query 1428 GGAAACAATGTAACTATTCCAGGCATGGGA-TTCGCAATTCCTACAGAT-AGTGGAAAAA 1485
|| ||||||||| ||||||||||||| ||| || ||| ||||||||||| | || ||
Sbjct 1231 GGCAACAATGTATCTATTCCAGGCATAGGACTT-GCACTTCCTACAGATGAA-GGCAAGG 1288
Query 1486 TGTACA-AGATGATATCTGCTTTTCATGCCTTGAACAATAGTACTTCT-GTA---GATAA 1540
|||||| | ||||| |||||| || |||| ||||| || | | || | ||| || ||
Sbjct 1289 TGTACACA-ATGATCTCTGCTCTTGATGCATTGAAGAACAAAAGTT-TAGTACTCGACAA 1346
Query 1541 AGATATGTATGTAGGTGAATGTCAAGATTATGAAAACTTCGATCAAGATCGTG-TCTCA- 1598
||| ||||||||||||||||| ||||| ||||| | ||||||| ||||| | || |
Sbjct 1347 AGACATGTATGTAGGTGAATGCCAAGACTATGACAGCTTCGATAAAGATA-TCATC-CGT 1404
Query 1599 GGGAAACTTTTGATATGTAGCTACTCTGCTC-GTTTTGTTCTCGGGCTTTCGACTATAAA 1657
||||| ||| ||||||||||||||||| || |||| || ||||| ||||| ||||| ||
Sbjct 1405 GGGAATCTTCTGATATGTAGCTACTCTA-TCCGTTTCGTGCTCGGACTTTCCACTATTAA 1463
Query 1658 ACAAGCTTTAGATGTTGCCAAGAATCTATCCGCGACTGGTGT-GATATTCTATATAGACC 1716
||||||||||| |||| ||||||||||||| || | ||||| | | ||||| || ||||
Sbjct 1464 ACAAGCTTTAGCTGTTACCAAGAATCTATCTGCAAAGGGTGTTG-TGTTCTACATGGACC 1522
Query 1717 CGTATGTTCTTGGTTTTGAGATCAATCCAACACCGATGGATATGCCCGGGATCATAATTC 1776
| ||||| ||||||||| |||| || || ||||| ||||| |||||||| ||||||||||
Sbjct 1523 CTTATGTCCTTGGTTTTCAGATTAACCCTACACCAATGGACATGCCCGGCATCATAATTC 1582
Query 1777 CATC-TGTAGAAGATTCCAAGACTTTACTCAAGTACTATAACTCTTCTATTCAAAGAGAT 1835
|||| | ||||||||||||| ||||||||||||||||||||||||| || |||||||
Sbjct 1583 CATCCTC-AGAAGATTCCAAGGTTTTACTCAAGTACTATAACTCTTCTCTTGTAAGAGAT 1641
Query 1836 GTAACCACTAAAGAAATTGTTAGTTTTGGAGCGGTTGCAGCCATAGAAGGCGGTTTAAAT 1895
| |||||| ||||| |||||||| ||||| || ||||| ||||| | ||| || ||||
Sbjct 1642 GGAACCACCAAAGAGATTGTTAGATTTGGGGCAGTTGCGGCCATTGCAGGTGGACAAAAT 1701
Query 1896 GCTAACTTTAGTAACAGAGCTCCTAAGGTAATGTATTACTCAGCAAGAGGACCTGATCCT 1955
|||||||| |||||||||||||| ||| ||||||| |||||||||||||||||||||||
Sbjct 1702 GCTAACTTCAGTAACAGAGCTCCCAAGATAATGTACTACTCAGCAAGAGGACCTGATCCA 1761
Query 1956 GAAGACAAC-TCTTTTAACGACGCAGACGTATTAAAACCGAACCTCGTAGCACCTGGAAA 2014
||||||| | ||||| |||||||| ||| | || ||||| || || ||||| ||||||||
Sbjct 1762 GAAGACAGCCTCTTT-AACGACGCCGACATTTTGAAACCAAATCTTGTAGCTCCTGGAAA 1820
Query 2015 CTCTATTTGGGGTGCTTGGAGTTCTGCTTCAACGGATTCTACCGAGTTTGAAGGTGAGAA 2074
|| |||||||||||||||||||| ||| | || || || || ||||||||||| ||||
Sbjct 1821 TTCCATTTGGGGTGCTTGGAGTTCCGCTGCCACTGAATCCACTGAGTTTGAAGGAGAGAG 1880
Query 2075 ATTT-GCGATGATGTCCGGTACAAGTATGGCTGCTCCTCATGTAGCTGGTGTGGCTGCAT 2133
||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1881 -TTTCGCGATGATGTCTGGTACGAGTATGGCTGCTCCTCATGTAGCTGGTGTGGCTGCAT 1939
Query 2134 TAATCAAACA-AAGTT-ATCCACAGTTTACTCCTTCAACAATCT-CATCCGCGCTTTCAA 2190
| |||| || || || | | | |||| ||||||| | || | |||| || || ||||
Sbjct 1940 TGGTCAAGCAGAAATTCAGAAA-A-TTTAGTCCTTCATCTAT-TGCATCTGCACTGTCAA 1996
Query 2191 CAACGGCTCTCCTAAATGATAATAAAGGC-AGTCCGATAATGGCTCAGCGAACTTATTCC 2249
|||| || | || ||| |||||||| || | |||||||||||| || ||||| |
Sbjct 1997 CAACCTCTGTTCTTTTTGACAATAAAGGTGAGGC-GATAATGGCTCAACGTGCTTATGCT 2055
Query 2250 AATCCCGATCAAAGCCTCTATACC-GCAACACCGTCTGATATGGGGAGCGGTTTTGTTAA 2308
||||| ||||||| ||| | | || ||||| || | ||||||||||| || ||||| ||
Sbjct 2056 AATCCTGATCAAACCCTATCT-CCTGCAACCCCATTTGATATGGGGAATGGCTTTGTGAA 2114
Query 2309 CGCAACGGCAGCTTTAGACCCTGGTCTAGTTTTTGATACAAGTTTTGAAGATTATATATC 2368
||||| |||||||| || ||||| ||| | |||||||| ||||||||||| ||||| ||
Sbjct 2115 TGCAACCGCAGCTTTGGATCCTGGCCTAATCTTTGATACTAGTTTTGAAGACTATATGTC 2174
Query 2369 ATTTCTTTGTGGGATCAACGGCTCGGATACGGTGGTATTCAACTACACCGG-ATTCCGCT 2427
|||||||||||| ||||| || || | | | ||||| |||||||||||||| | |
Sbjct 2175 ATTTCTTTGTGGAATCAATGGATCAGCTCCAGTGGTTTTCAACTACACCGGCAAAAAT-T 2233
Query 2428 GTCCCGCTAA-CAACACACCAGTCAGTGGTTTTGACCTCAATTTGCCATCAATTACAGTA 2486
|| ||| | ||| || || |||| || |||||||||||||||||| || || ||
Sbjct 2234 GTTT-GCTTAGCAATGCAACAATCAGCGGAGCTGACCTCAATTTGCCATCCATCACTGTC 2292
Query 2487 TCGACACTTAGTGGCACACAAACTTTCCAAAGATCGA-TGAGAAACATAGCCGGCAATGA 2545
||| |||| ||| | |||| |||||||| | | ||| |||||| || || |||||
Sbjct 2293 GCGAGGCTTAACAACACTCGAACTATCCAAAGA-CTAATGACAAACATTGCTGGAAATGA 2351
Query 2546 GACATACAATGTTGGTTGGAGTCCTCCTTATGGTGTTTCAATGAAAGTATCACCTACTCA 2605
||| || | ||| ||| || |||||||| || ||||| |||||||||| ||||||||
Sbjct 2352 GACCTATACTGTCAGTTTGATTCCTCCTTTTGATGTTTTGGTGAAAGTATCTCCTACTCA 2411
Query 2606 ATTTTCTATTGCTA-TGG-GAGA-AAATCAAGTACTTAGCGTAACCCTCACGGTGACA-A 2661
||| ||||| || | ||| |||| ||| | ||||||| |||| |||||| | | | |
Sbjct 2412 ATTCTCTATAGCCAGTGGAGAGACAAAGC---TACTTAGTGTAATCCTCACAGCAA-AGA 2467
Query 2662 AGAACAGTTCCAGTT-CTAGTTTTGGCAGAATCG-GATTGTTTGGAAATACAGGACACAT 2719
||||||| || | || |||||||||| ||| || | || ||||||| ||||||| |
Sbjct 2468 AGAACAGCTCTA-TTGCTAGTTTTGGGAGAGTCAAGCTT-TTTGGAACCGCAGGACATGT 2525
Query 2720 TGTTAATATTCC--TGTAACTGTCATAGCGAAAATCGCTTCGA 2760
|||| ||||||| ||| |||||| || ||||||||| ||||
Sbjct 2526 TGTTCATATTCCGATGT--CTGTCACAGTGAAAATCGCCTCGA 2566
> Ahg890123 jgi|Araly1|890123|Al_scaffold_0007_2109
Length=1218
Score = 795 bits (430), Expect = 0.0
Identities = 939/1183 (79%), Gaps = 42/1183 (4%)
Strand=Plus/Plus
Query 1599 GGGAAACTTTTGATATGTAGCTACTCTGCT-CGTTTTGTTCTCGGGCTTTCGACTATAAA 1657
||||| ||| ||||||||||||||||| | ||||| || ||||| ||||| ||||| ||
Sbjct 49 GGGAATCTTCTGATATGTAGCTACTCT-ATCCGTTTCGTGCTCGGACTTTCCACTATTAA 107
Query 1658 ACAAGCTTTAGATGTTGCCAAGAATCTATCCGCGACTGGTG-TGATATTCTATATAGACC 1716
||||||||||| |||| ||||||||||||| || | |||| || | ||||| || ||||
Sbjct 108 ACAAGCTTTAGCTGTTACCAAGAATCTATCTGCAAAGGGTGTTG-TGTTCTACATGGACC 166
Query 1717 CGTATGTTCTTGGTTTTGAGATCAATCCAACACCGATGGATATGCCCGGGATCATAATTC 1776
| ||||| ||||||||| |||| || || ||||| ||||| |||||||| ||||||||||
Sbjct 167 CTTATGTCCTTGGTTTTCAGATTAACCCTACACCAATGGACATGCCCGGCATCATAATTC 226
Query 1777 CAT-CTGTAGAAGATTCCAAGACTTTACTCAAGTACTATAACTCTTCTATTCAAAGAGAT 1835
||| || ||||||||||||| ||||||||||||||||||||||||| || |||||||
Sbjct 227 CATCCT-CAGAAGATTCCAAGGTTTTACTCAAGTACTATAACTCTTCTCTTGTAAGAGAT 285
Query 1836 GTAACCACTAAAGAAATTGTTAGTTTTGGAGCGGTTGCAGCCATAGAAGGCGGTTTAAAT 1895
| |||||| ||||| |||||||| ||||| || ||||| ||||| | ||| || ||||
Sbjct 286 GGAACCACCAAAGAGATTGTTAGATTTGGGGCAGTTGCGGCCATTGCAGGTGGACAAAAT 345
Query 1896 GCTAACTTTAGTAACAGAGCTCCTAAGGTAATGTATTACTCAGCAAGAGGACCTGATCCT 1955
|||||||| |||||||||||||| ||| ||||||| |||||||||||||||||||||||
Sbjct 346 GCTAACTTCAGTAACAGAGCTCCCAAGATAATGTACTACTCAGCAAGAGGACCTGATCCA 405
Query 1956 GAAGACA-ACTCTTTTAACGACGCAGACGTATTAAAACCGAACCTCGTAGCACCTGGAAA 2014
||||||| ||| ||||||||||| ||| | || ||||| || || ||||| ||||||||
Sbjct 406 GAAGACAGCCTC-TTTAACGACGCCGACATTTTGAAACCAAATCTTGTAGCTCCTGGAAA 464
Query 2015 CTCTATTTGGGGTGCTTGGAGTTCTGCTTCAACGGATTCTACCGAGTTTGAAGGTGAGAA 2074
|| |||||||||||||||||||| ||| | || || || || ||||||||||| ||| |
Sbjct 465 TTCCATTTGGGGTGCTTGGAGTTCCGCTGCCACTGAATCCACTGAGTTTGAAGGAGAG-A 523
Query 2075 ATTT-GCGATGATGTCCGGTACAAGTATGGCTGCTCCTCATGTAGCTGGTGTGGCTGCAT 2133
||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct 524 GTTTCGCGATGATGTCTGGTACGAGTATGGCTGCTCCTCATGTAGCTGGTGTGGCTGCAT 583
Query 2134 TAATCAAACA-AAGTT-ATCCACAGTTTACTCCTTCAACAATCT-CATCCGCGCTTTCAA 2190
| |||| || || || | | | |||| ||||||| | || | |||| || || ||||
Sbjct 584 TGGTCAAGCAGAAATTCAGAAA-A-TTTAGTCCTTCATCTAT-TGCATCTGCACTGTCAA 640
Query 2191 CAACGGCTCTCCTAAATGATAATAAAGGC-AGTCCGATAATGGCTCAGCGAACTTATTCC 2249
|||| || | || ||| |||||||| || | |||||||||||| || ||||| |
Sbjct 641 CAACCTCTGTTCTTTTTGACAATAAAGGTGAGGC-GATAATGGCTCAACGTGCTTATGCT 699
Query 2250 AATCCCGATCAAAGCCTCTATACC-GCAACACCGTCTGATATGGGGAGCGGTTTTGTTAA 2308
||||| ||||||| ||| | | || ||||| || | ||||||||||| || ||||| ||
Sbjct 700 AATCCTGATCAAACCCTATCT-CCTGCAACCCCATTTGATATGGGGAATGGCTTTGTGAA 758
Query 2309 CGCAACGGCAGCTTTAGACCCTGGTCTAGTTTTTGATACAAGTTTTGAAGATTATATATC 2368
||||| |||||||| || ||||| ||| | |||||||| ||||||||||| |||| ||
Sbjct 759 TGCAACCGCAGCTTTGGATCCTGGCCTAATCTTTGATACTAGTTTTGAAGACCATATGTC 818
Query 2369 ATTTCTTTGTGGGATCAACGGCTCGGATACGGTGGTATTCAACTACACCGG-ATTCCGCT 2427
||||||||||||||| || || || | | | ||||||||||||||||| || | |
Sbjct 819 ATTTCTTTGTGGGATAAATGGATCAGCTCCAGTGGTATTCAACTACACTGGCAAGAAT-T 877
Query 2428 GTCCCGCTAA-CAACACACCAGTCAGTGGTTTTGACCTCAATTTGCCATCAATTACAGTA 2486
||| || | ||| || || |||| || | |||||||||||||||||| || || ||
Sbjct 878 GTCTT-CTTAGCAATGCAACAATCAGCGGATCTGACCTCAATTTGCCATCCATCACTGTC 936
Query 2487 TCGACACTTAGTGGCACACAAACTTTCCAAAGATCGAT-GAGAAACATAGCCGGCAATGA 2545
|| | |||| ||| | |||| |||||||| | || || |||||| || || |||||
Sbjct 937 TCAAGGCTTAACAACACTCGAACTGTCCAAAGA-CTATTGACAAACATTGCTGGAAATGA 995
Query 2546 GACATACAATGTTGGTTGGAGTCCTCCTTATGGTGTTTCAATGAAAGTATCACCTACTCA 2605
||| || | ||| ||| || |||||||| || ||||| |||| ||||| ||||||||
Sbjct 996 GACCTATACTGTCAGTTTGATTCCTCCTTTTGATGTTTTGGTGAAGGTATCTCCTACTCA 1055
Query 2606 ATTTTCTATTGCTA-TGG-GAGA-AAATCAAGTACTTAGCGTAACCCTCACGGTGACA-A 2661
||| ||||| || | ||| |||| ||| | ||||||| |||| |||||| | | | |
Sbjct 1056 ATTCTCTATAGCCAGTGGAGAGACAAAGC---TACTTAGTGTAATCCTCACAGCAA-AGA 1111
Query 2662 AGAACAGTTCCAGTT-CTAGTTTTGGCAGAATCG-GATTGTTTGGAAATACAGGACACAT 2719
||||||| || | || |||||||||| ||| || | || ||||||| ||||||| |
Sbjct 1112 AGAACAGCTCTA-TTGCTAGTTTTGGGAGAGTCAAGCTT-TTTGGAACCGCAGGACATGT 1169
Query 2720 TGTTAATATTCC--TGTAACTGTCATAGCGAAAATCGCTTCGA 2760
|||| ||||||| ||| |||||| || ||||||||| ||||
Sbjct 1170 TGTTCATATTCCGATGT--CTGTCACAGTGAAAATCGCCTCGA 1210
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 108100115310
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5