BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G44750.2 Length=3841 Score E Sequences producing significant alignments: (Bits) Value Ahg494507 jgi|Araly1|494507|fgenesh2_kg.8__323__AT5G44750.2 5788 0.0 Ahg890697 jgi|Araly1|890697|Al_scaffold_0007_2683 178 3e-43 > Ahg494507 jgi|Araly1|494507|fgenesh2_kg.8__323__AT5G44750.2 Length=3789 Score = 5788 bits (3134), Expect = 0.0 Identities = 3576/3787 (94%), Gaps = 39/3787 (1%) Strand=Plus/Plus Query 18 CTTCTTCTTCTCCGTCTCG-T-TGAGATTCCTCCCCAACAACAACAATGAAGCGTAGCTT 75 ||||||||||||||||||| | |||||||| ||||||||||| ||||||||||||||||| Sbjct 24 CTTCTTCTTCTCCGTCTCGCTCTGAGATTCATCCCCAACAACTACAATGAAGCGTAGCTT 83 Query 76 GGGTTCAAATTCTTCAAACAATAGTGGCAGTGGAAGTAACAAGAAGTCTAAGAAGAATAA 135 |||||| |||||||| |||||||||||||||||||||||||||||| |||||||||| || Sbjct 84 GGGTTCCAATTCTTCGAACAATAGTGGCAGTGGAAGTAACAAGAAGACTAAGAAGAAGAA 143 Query 136 TAATCCGAGCAATCAGAAAACCCTAGGCGCGGCATGGGGCGCTGCTTCTTCTCGTTCTTC 195 ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct 144 TAATCCGAGCAATCAGAAAACCCTAGGTGCCGCATGGGGCGCTGCTTCTTCTCGTTCTTC 203 Query 196 TTTCCGGTCTTCTCCTTTCTCCGATTTCGGAAGTTACATGGAAGTGAAAAATAGGAAACT 255 ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| Sbjct 204 TTTCCGGTCTTCTCCTTTCTCTGATTTCGGAAGTTACATGGAAGTGAAAAATCGGAAACT 263 Query 256 TCAGAACCAATTTGAGACTGAGGCTTCTGCTGCTTCTCGTGGTGTTTCGGGTTCTGAGAA 315 ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct 264 TCAGAACCAATTTGAGACTGAGGCTTCTGCTTCTTCTCGTGGTATTTCGGGTTCTGAGAA 323 Query 316 ACTTATTTTCCAAGGGGTTTCAATCTTTGTGGATGGGTTCACTATTCCTTCTCATCAGGA 375 |||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||| Sbjct 324 ACTTATTTTCCAAGGGGTTTCAATCTTTGTGGATGGTTTCACCATTCCTTCCCATCAGGA 383 Query 376 GTTGA-AAGGATACATGATGAAGTATGGTGGAAGATTTGAGAACTACTTTTCTAGGCGTT 434 || | || |||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct 384 ATT-ACGAGCTTACATGATAAAGTATGGTGGAAGATTCGAGAACTACTTTTCTAGGCGTT 442 Query 435 CTGTTACACATATCATTTGCAGCAACCTTCCAGATAGTAAAGTCAAGAATCTTAGGACAT 494 |||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||| Sbjct 443 CTGTAACACATATCATCTGCAGCAACCTTCCAGATAGTAAAGTCAAGAATCTAAGGGCAT 502 Query 495 TCAGCAGAGGATTACCTGTTGTGAAACCTACATGGATAGTGGACTCTATCTCTGCCAACA 554 |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 503 TCAGCAGAGGGTTACCTGTTGTGAAACCCACATGGATAGTGGACTCTATCTCTGCCAACA 562 Query 555 GACTTCTGGGCTGGGTTCCTTACCAGCTAGATCAACTAAATGATACCCAGCCAAAGTTGT 614 ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| Sbjct 563 GACTTCTGGGCTGGGTTCCTTACCAGCTAGATCAACTGAATGATACCCAGCCGAAGTTGT 622 Query 615 CTGCCTTTTTTGCACCCAGAAGCCATTTGACCCCTCAGATGGCTTCGCCGGTTACATCTT 674 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 623 CTGCCTTTTTTGCACCCAGAAGCCATTTGACCCCTCGGATGGCTTCGCCGGTTACATCTT 682 Query 675 TTCAGCCTGATACTGGATACAGTGAAGCTGAAGAAGGAAGTTCAATTAGAGCAGATG-AT 733 || ||||||||||||||||||||||||||||||||||||||||||||| ||||| | || Sbjct 683 GTCCGCCTGATACTGGATACAGTGAAGCTGAAGAAGGAAGTTCAATTAGGGCAGA-GCAT 741 Query 734 TCAGAGGAAGCAAGGGACCACATCGATGATGAAATTGATGGCGTTTATATCGAGAACACT 793 | ||||||||||| ||||| | ||||||||| |||| ||||||||||||| ||||||| Sbjct 742 TTTGAGGAAGCAAGAGACCATGTTGATGATGAATTTGACGGCGTTTATATCGGGAACACT 801 Query 794 ACTCCAGAACTGACAGAACAAACAGGAACTGGTGATCTGAAATCTTCTGAAATGAATGCA 853 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 802 ACTCCAGAACTGACAGAAGAAACAGGAACTGGTGATCTGAAATCTTCTGAAATGAATGCA 861 Query 854 GAAGGACTTGGTAATTATGACATAGAAGAAAAAGAAGTTAGTAGTGAACTTCAATCCACT 913 ||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct 862 GAAAGACTTGCTAATTATGACATAGAAGAAAAAGAAGTGAGTAGTGAACTTCAATCAACT 921 Query 914 ACTAATCTTCATTCCACTTCAGACAACAAGTCCGTTCATGCAAATGGGAAGAATGGTGGC 973 || || ||||||||| ||||||||||||||||||||||||||||||||||||||| |||| Sbjct 922 ACCAAACTTCATTCCGCTTCAGACAACAAGTCCGTTCATGCAAATGGGAAGAATGATGGC 981 Query 974 AAATCAATTGCAACTGCTGCTGGATCTTCTACAAGGCGTCATTCAACTCTCGAGGA-CCC 1032 ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||| Sbjct 982 AAATCGATTGCAACTGCTGCTGGATCTTCTGCAAGGCGTCATTCAACTCTCGAGGATCCC 1041 Query 1033 TAATTTTGTAGAAAACTACTTTAAGAATTCAAGGCTGCATTTTATTGGAACATGGAGGAA 1092 ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1042 -AATTTCGTGGAAAACTACTTTAAGAATTCAAGGCTGCATTTTATTGGAACATGGAGAAA 1100 Query 1093 CAGGTACCGTAAAAGATTTCATGGCTCTTCCAATGGACTTAAATGGGCAGATTCAGGCCA 1152 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1101 CAGGTACCGTAAAAGATTTCATGGCCCTTCCAATGGACTTAAATGGGCAGATTCAGGCCA 1160 Query 1153 GAATACAGCTGAAATGGCCAAGAAGTCAACCATTATCCACATTGATTTGGATTGCTTCTT 1212 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1161 GAATACAGCTGAAATGGACAAGAAGTCAACCATTATCCACATTGATTTGGATTGCTTCTT 1220 Query 1213 TGTGTCAGTGGTAATCAAGAACCGTCTTGAATTACACGACAAGCCGGTAGCTGTATGTCA 1272 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1221 TGTGTCAGTGGTAATCAAGAACCGTCTTGAATTACACGACAAGCCGGTAGCTGTATGTCA 1280 Query 1273 CTCAGATAACCCAAAAGGAACGGCTGAAATTTCATCTGCAAACTATCCAGCGCGGGCTTA 1332 |||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct 1281 CTCAGATAACCCGAAAGGAACGGCTGAAATTTCATCTGCAAATTATCCAGCTCGGGCTTA 1340 Query 1333 TGGAGTGAAGGCAGGTATGTTTGTAAGACATGCAAAAGACCTTTGCCCTCAGCTTGTTAT 1392 ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 1341 TGGAGTGAAGGCAGGTATGTTTGTAAGACATGCAAAAGAGCTTTGTCCTCAGCTTGTTAT 1400 Query 1393 TGTTCCTTACAACTTTGAAGCCTACGAAGAGGTAGCTGATCAGTTTTATGACATCTTGCA 1452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1401 TGTTCCTTACAACTTTGAAGCCTACGAAGAGGTAGCTGATCAGTTTTATGACATCTTGCA 1460 Query 1453 TAGGCATTGCAGAAAAGTCCAGGCGCTAAGCTGCGATGAAGCGTTTTTAGATGTCTCAGA 1512 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1461 TAGGCATTGCAGAAAAGTCCAGGCACTAAGCTGCGATGAAGCGTTTTTAGATGTCTCAGA 1520 Query 1513 TTTGAGTGATGTAGAAACCGAAGTTTTAGCCTCGACAATAAGGAATGAGATCCTTGAGAC 1572 |||||| ||||||||| ||| | ||||||||||||||||||||||||||||||||||||| Sbjct 1521 TTTGAGGGATGTAGAACCCGGATTTTTAGCCTCGACAATAAGGAATGAGATCCTTGAGAC 1580 Query 1573 TACTGGATGCAGTGCAAGTGCTGGAATAGGCGGTACTATGCTAATGGCTCGTCTTGCTAC 1632 |||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct 1581 TACTGGATGCAGCGCAAGTGCTGGGATAGGCGGTACTATGCTAATGGCCCGTCTTGCTAC 1640 Query 1633 CAGAGTTGCTAAACCAGCCGGTCAACTTTATATTTCTGCTGAGAAGGTAGAGGAGTTCTT 1692 ||||||||||||||||||||| || |||||||| |||||||||||||| ||||||||||| Sbjct 1641 CAGAGTTGCTAAACCAGCCGGCCAGCTTTATATCTCTGCTGAGAAGGTTGAGGAGTTCTT 1700 Query 1693 GGATCAGCTTCCAGTCGGGACACTACCTGGTGTAGGTTCTGTGTTGAAGGAGAAGCTGGT 1752 |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1701 GGATGGGCTTCCAGTCGGGACACTACCTGGTGTAGGTTCTGTGTTGATGGAGAAGCTGGT 1760 Query 1753 GAAGCAAAATATTCAAACCTGTGGGCAGTTACGTTTGATTTCCAAGGATTCTCTTCAAAA 1812 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1761 GAAGCAAAATATTCAAACCTGTGGGCAGTTACGTTTGATTTCCAAGGATTCTCTTCAAAA 1820 Query 1813 GGATTTTGGGGTAAAAACCGGCGAGATGCTTTGGAGTTATAGCAGAGGACTAGACCTACG 1872 |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1821 GGATTTTGGGGTGAAAACCGGCGAGATGCTCTGGAGTTATAGCAGAGGACTAGACCTACG 1880 Query 1873 GTCAGTTACAGCAGTGCAGGAGAGTAAGTCCATAGGGGCTGAAGTGAATTGGGGTGTGCG 1932 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1881 GTCAGTTACAGCAGTGCAGGAGAGTAAGTCCATAGGGGCTGAAGTGAATTGGGGTGTGCG 1940 Query 1933 GTTCAGAGATCAGCAAGACGTCTTTATTCTCGTTCAACACTTCCTCCAATGCCTATGCAA 1992 |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| Sbjct 1941 GTTCAGAGATCAGCAAGATGTCTGTATTCTCGTTCAACACTTCCTCCAATGCCTATGCAA 2000 Query 1993 AGAAGTTTCTTTGCGTCTGCAAGGATGTGAAATGATAGGACGCACTTTTACTCTTAAGAT 2052 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 2001 AGAAGTTTCTTTGCGTCTGCAAGGATGTGAAATGATAGGACGCAATTTTACTCTTAAGAT 2060 Query 2053 aaaaaagagaaaaaaaGATGCTGAAGAACCTACAAAGTATATGGGTTGTGGAGACTGTGA 2112 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 2061 AAAAAAGAGAAAAAACGATGCTGAAGAACCTACAAAGTATATGGGTTGTGGAGACTGTGA 2120 Query 2113 CAATCTGAGTCGCTCCATCACGGTGCCTGCTGCTACAGATGACATAGAAGTTCTGCAGAG 2172 |||||||||||| |||||||| |||||| |||||||||||||| |||||||||||||||| Sbjct 2121 CAATCTGAGTCGTTCCATCACTGTGCCTACTGCTACAGATGACGTAGAAGTTCTGCAGAG 2180 Query 2173 GATTTCAAAGAAGTTGTTTGGGTCATTTTGCTTGGATGTAAAGGAAGTTCGTGGGGTTGG 2232 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 2181 GATTTCAAAGAAGTTGTTTGGGTCATTTTGCTTGGATGTTAAGGAAGTTCGTGGGGTTGG 2240 Query 2233 GCTTCAGGTCTCTAAGCTTGACAGTGCAGATCCTTCTAATAAAGGTTCAAGGACTCTGAA 2292 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2241 GCTTCAGGTCTCTAAGCTTGACAGTGCAGATCCTTCTAATAAAGGTTCAAGGACTCTGAA 2300 Query 2293 ATCATGGCTCAGCTCTGCACCTGCCGT-TGTCCAAATAGAACAAGATGATAATGTTTTTG 2351 ||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||| Sbjct 2301 ATCATGGCTCAGCTCTGCATCTGCC-TCTGTCCAAATAGAACAAGATGATAATGTTTTTG 2359 Query 2352 CTGCAAAGGTTAGGGAAAACTCAGATTGTAACAGGCCTGTTACTGGTGGAGTTTCTAGAC 2411 ||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct 2360 CTGCAAAAGTTAGGGAAAACTCAGATTGTAATAGGCATGTTACTGGTGGAGTTTCTAGAC 2419 Query 2412 TCCGAGAATCTAATTCAGAAGAATCTTCAATTCAGTCAGGTGATACAAATTCATCCTTAC 2471 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 2420 TCCGAGAATCTAATTCAGCAGAATCTTCAATTCAGTCAGGTGATACAAATTCATCCTTAC 2479 Query 2472 CGCCCATGTGTTATCTCGACATGGAAGTTCTAGAGAACCTTCCTCCAGAGCTCCTTTCAG 2531 |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 2480 CGCCTATGTGTCATCTCGACATGGAAGTTCTAGAGAACCTTCCTCCAGAGCTCCTTTCTG 2539 Query 2532 AATTAGATGGAACCTACGGTGGGAAGCTGTTTGAGTTGATTGAGAAAAAACGAGGCAAAA 2591 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 2540 AATTAGATGGAACCTACGGTGGGAAGTTGTTTGAGTTGATTGAGAAAAAACGAGGCAAAG 2599 Query 2592 GAAGAATCAACT-GCAACTCTCCACATGTCTCCTTGGATGGCACTGCTGCTAGCATTAAA 2650 ||| |||||| | |||| ||||||||||||||||||||||||||||||| | |||||||| Sbjct 2600 GAAAAATCAA-TAGCAATTCTCCACATGTCTCCTTGGATGGCACTGCTGGTGGCATTAAA 2658 Query 2651 GAATTAAAATCTCTCTCAGTTAAGATACATGGCTTGAGCACCTCTGGAGAAAAGGAATAT 2710 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 2659 GAATTAAAATCTCTCTCAGTTAAGATACATGGCTTGAGCACCTCTAGAGAAAAGGAATAT 2718 Query 2711 AAAGAACCATATGTGCCGCATCCTTCCATTGCCAGAACGTCTAATCAGCATACAATAGAA 2770 |||||||| ||||||||||||||||||||||||||||| |||||||| | |||||||||| Sbjct 2719 AAAGAACCGTATGTGCCGCATCCTTCCATTGCCAGAACTTCTAATCATCGTACAATAGAA 2778 Query 2771 ATGACGGATTTGTTGCCTTCATCCCTTAGTCAAGTCGACGTCTCTGTGTTACAAGAATTA 2830 ||||| |||||| | ||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 2779 ATGACTGATTTGATACCTTCATTCCTTAGTCAAGTCGACGTCTCTGTGTTACAAGAATTA 2838 Query 2831 CCTGAAGAGTTGAGAGCTGACGTATTGGGAGCATTTCCTTCACA-CAGGAGACAACAGTC 2889 |||||||| ||||| | |||||||||||||||||||||| | || ||||||||||||||| Sbjct 2839 CCTGAAGAATTGAGGGTTGACGTATTGGGAGCATTTCCTGC-CAACAGGAGACAACAGTC 2897 Query 2890 ATCATCAGATGTTCCCAAGGAGACTTGTAAGAAACAAGATGAGGAACCAATAGATTTAAA 2949 ||||||| ||||||||| ||||||||||||||||||||||||||| || |||||| |||| Sbjct 2898 ATCATCAAATGTTCCCATGGAGACTTGTAAGAAACAAGATGAGGAGCCGATAGATATAAA 2957 Query 2950 GGGCACTGAGAATGAGATTGGATTATCATTTAGCTCTCTTTGGTTTGGGAATCCTCCTCT 3009 ||||||||||||| |||||||||| |||| |||||||| ||||||||||||||||||||| Sbjct 2958 GGGCACTGAGAATAAGATTGGATTCTCATGTAGCTCTCGTTGGTTTGGGAATCCTCCTCT 3017 Query 3010 TTGGACAGAGAAGTTCAAAGTTAGTGGCAATTGTACTATGGAAAAACTTTCAGCGATATA 3069 ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct 3018 TTGGACAGAGAAGTTCAAAGTTAGTGGCAATTGTACTTTGGAAAAACTTTCAGGGATATA 3077 Query 3070 CTTCAAGGTTGCTCAGTCAAGGCCCATGTTATCCCTAGTCCTGCAACACGCTATTTCAGA 3129 ||||||||||||||||| ||| || |||||||||| ||||| ||||||||||||||||| Sbjct 3078 CTTCAAGGTTGCTCAGTTAAGACCTATGTTATCCCGGGTCCTACAACACGCTATTTCAGA 3137 Query 3130 AATGAGTAGTTTTCCTGATGCAGCAAGTGCCAGTGATTTGGACAAAGCTATTTACGATGT 3189 ||| |||||||||| ||||||||||||||||| |||||||||||||||||| |||||||| Sbjct 3138 AATCAGTAGTTTTCATGATGCAGCAAGTGCCAATGATTTGGACAAAGCTATATACGATGT 3197 Query 3190 GTGTGAACTTCTTAAACAGTACATTAACCTCAAGGTAGGAGGTGATATTGAGGAGATATA 3249 ||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||| Sbjct 3198 GTGTGAACTTCTTAAACAGTACATTAAGCTCAAGGTAGAAGGTGATATTGAAGAGATATA 3257 Query 3250 TCTCTGCTTCCGACTTCTGAAAAGATTAGCAGCAAGGAGCCAGCTTTTCCTACAAGTCTA 3309 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 3258 TCTCTGCTTCCGACTTCTGAAAAGATTAGCAGCAAGGAGCCAACTTTTCCTACAAGTCTA 3317 Query 3310 TGAGATATTGTCTCCCTTTATTCAGGCCTCGATCAGTGAACACTATGGAGGAAGCTTGAG 3369 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3318 TGAGATATTGTCTCCCTTTATTCAGGCCTCGATCAGTGAACACTATGGAGGAAGCTTGAG 3377 Query 3370 TATACCATGAAAGGTCTTCACTGAGGTTGGACTGAAGTCTGGCTGGATGCTATAAAAGAA 3429 ||| || |||||| |||| ||||||||||| |||||||||||| | |||||||||||||| Sbjct 3378 TATTCCTTGAAAGATCTTTACTGAGGTTGGGCTGAAGTCTGGCCGAATGCTATAAAAGAA 3437 Query 3430 TGTATACTTGCAGGACAATGTGGATTCTGAAGGGCATCATGGTGAACGCACACGGACAAT 3489 ||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||| Sbjct 3438 TGTATACTTGCAGGACAATGTGGATCCTGAAGGGCATCATGGTGAATGCACTCGGACAAT 3497 Query 3490 ACACGAAGCAGCTTAAGCAAAC--CAAACTCGGGAAGATTTTTGGGCAATAGA-AGGCTA 3546 ||||||||||||||||| |||| ||| | | ||| | | | |||| | || Sbjct 3498 ACACGAAGCAGCTTAAGAAAACGGCAA--TAG--AAGGCTA--G--C--TAGATA---TA 3544 Query 3547 GCTGCTGCAAATCCGCGTGTGAAATGGAGTCTCGAAAGCACTTATTGTTGCATTTGCACA 3606 |||||||||| ||||||| |||||||||||||||| ||| ||||| ||||||||||| Sbjct 3545 T-TGCTGCAAATTCGCGTGTCAAATGGAGTCTCGAAAACACCCATTGTGGCATTTGCACA 3603 Query 3607 ATGAGATATGGAAGTGATTCAAATCTCAAAGTGCAGAGCCATTAGGAGCCACTGCTTTTC 3666 ||| ||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||| Sbjct 3604 ATGGGATATGGAAGTTATTCAAATCTCAAAGTGCAGAGCCATTAGGAGCAACTACTTTTC 3663 Query 3667 TCTGTTCATAGAAATGTAACTGAACTTGATAATCATTTCTTCCCATGACACGAGCT-A-- 3723 ||||||||||| |||||| |||||||||||||||||||| ||||||||||||||| | Sbjct 3664 TCTGTTCATAGGAATGTATCTGAACTTGATAATCATTTCGTCCCATGACACGAGCGCAGC 3723 Query 3724 ---ATATATCACCTAGTTCCTTGTTCATGAATTGTCTTTATTT-TTAAAAACGATAATTT 3779 |||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||| Sbjct 3724 TGTATATATCACCTAGTTCCTTGTTCATGAATTTTCTTTATTTGTTAAAA-CGATAATTT 3782 Query 3780 ATTCTCT 3786 ||||||| Sbjct 3783 ATTCTCT 3789 > Ahg890697 jgi|Araly1|890697|Al_scaffold_0007_2683 Length=408 Score = 178 bits (96), Expect = 3e-43 Identities = 177/213 (83%), Gaps = 18/213 (8%) Strand=Plus/Plus Query 2838 AGTTGAGAGCT--GACGTATTGGGAGCATTTCCTTCACACA-GGAGACAACAGTCATCAT 2894 ||||||||| | || | ||| |||||||||||| | |||| || ||||||||||||||| Sbjct 188 AGTTGAGAGTTGGGA-GCATT-GGAGCATTTCCTACCCACATGG-GACAACAGTCATCAT 244 Query 2895 CAGATGTTCCCAAGGAGACTTGTAAGAAACAAGATGAGGAACCAATAGATTTAAAGGGCA 2954 |||||||||||||| | | | ||||||||||| | |||||| ||||||||| Sbjct 245 CAGATGTTCCCAAG-A-A-----A-----CAAGATGAGGAGTCGATAGATATAAAGGGCA 292 Query 2955 CTGAGAATGAGATTGGATTATCATTTAGCTCTCTTTGGTTTGGGAATCCTCCTCTTTGGA 3014 || ||||||||| |||||| |||| ||||||||| |||||||||||||||||| |||||| Sbjct 293 CTAAGAATGAGACTGGATTCTCATGTAGCTCTCTCTGGTTTGGGAATCCTCCTATTTGGA 352 Query 3015 CAGAGAAGTTCAAAGTTAGTGGCAATTGTACTA 3047 || ||||||||||| || | ||||||||||||| Sbjct 353 CATAGAAGTTCAAACTTTGGGGCAATTGTACTA 385 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 145151583422 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5