BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G44870.1 Length=3513 Score E Sequences producing significant alignments: (Bits) Value Ahg330904 jgi|Araly1|330904|fgenesh1_pm.C_scaffold_8000247 3790 0.0 Ahg915685 jgi|Araly1|915685|Al_scaffold_0008_436 2093 0.0 > Ahg330904 jgi|Araly1|330904|fgenesh1_pm.C_scaffold_8000247 Length=3471 Score = 3790 bits (2052), Expect = 0.0 Identities = 3039/3498 (87%), Gaps = 138/3498 (4%) Strand=Plus/Plus Query 10 TCTTCCGAAATAC-TCCCGGAGTCGTGGCAAGTGTTCATCAATTTCCGAGGAGCAGATTT 68 ||||||||||||| |||| |||||||||||||||||||||||||| | |||||||| || Sbjct 22 TCTTCCGAAATACTTCCC-AAGTCGTGGCAAGTGTTCATCAATTTCAGGGGAGCAGAATT 80 Query 69 GCGCAACGGTTTCATCAGCCATCTGGCGGGAG-CTTTGAC-CTCAGCTGGAATCACATAC 126 |||||| ||||||| |||||||||| ||||| ||| | | || ||| || |||| |||| Sbjct 81 GCGCAATAGTTTCATTAGCCATCTGGAGGGAGCCTTAG-CGCT-AGCCGGGATCAAATAC 138 Query 127 TACATCGACACGGAAGAAGTCCCGAGCGAAGATCTCACTGTCCTTTTCAAGAGGATAGAG 186 || ||||||||| |||| ||||||||||||||||| | |||||||||| ||||||| ||| Sbjct 139 TATATCGACACGAAAGAGGTCCCGAGCGAAGATCTTAGTGTCCTTTTCGAGAGGATCGAG 198 Query 187 GAATCGGAAATCGCACTGTCCATCTTCTCGAGCAATTATGCTGAGTCAAAATGGTGTTTG 246 |||| ||||| ||||||||||||||||||||||| || ||||| ||||| ||||||||| Sbjct 199 CAATCTGAAATTGCACTGTCCATCTTCTCGAGCAAGTACGCTGAATCAAACTGGTGTTTG 258 Query 247 GACGAGCTCGTGAAGATCATGGAACAAGTAAAGAAAGGAAAGCTCAGAATCATGCCC-GT 305 |||||||| ||||| |||||||||||||| ||||||| ||| ||| ||||||| ||| || Sbjct 259 GACGAGCTGGTGAAAATCATGGAACAAGTCAAGAAAGAAAAACTCCGAATCAT-CCCAGT 317 Query 306 CTTCTTCAACGTGAAGCCAGAGGAGGTGAGAGAGCAGAACGGAGAGTTCGGACTTAAGCT 365 |||||| ||||||||||| |||||||| ||||||||||| |||||||||||||||||||| Sbjct 318 CTTCTTTAACGTGAAGCCTGAGGAGGTTAGAGAGCAGAAAGGAGAGTTCGGACTTAAGCT 377 Query 366 TTACGGAGAAGGTAAAAGCAAACGACCCAACATACCTAATTGGGAGAACGCTTTGCGGTC 425 ||||||||||||||||| ||||||||||| |||||||||||||| |||||| ||| ||| Sbjct 378 ATACGGAGAAGGTAAAAGGAAACGACCCAATATACCTAATTGGGAAAACGCTCTGCAGTC 437 Query 426 TGTCCCAAGCAAGATAGGCTTGAATTTGGCGAATTTTAGAAACGAGAAGGAACTCCTTGA 485 ||| |||||||||||||||||||||||| |||||| ||| ||||||| ||| ||| |||| Sbjct 438 TGTTCCAAGCAAGATAGGCTTGAATTTGTCGAATTATAGGAACGAGAGGGAGCTCGTTGA 497 Query 486 CAAGATCA-TTGACTCCATCAAAAAAGTACTTGCCCGAATTACAC-GAGCAAGCAGAGTA 543 ||||| | ||||||| ||||||| ||| ||||||| |||| ||| | | |||||||||| Sbjct 498 AAAGAT-AGTTGACTCGATCAAAAGAGTGCTTGCCCTAATTCCACTG-GGAAGCAGAGTA 555 Query 544 GCAGAATCTCTAAACGGGATCTCAAAAGACTCAGAGGCAAAGAATGTAGACACATTTTCG 603 |||| | ||| |||||||||||||||| ||||| ||||||||||||||||| ||||||| Sbjct 556 ACAGAGTATCTGAACGGGATCTCAAAAGCCTCAGGGGCAAAGAATGTAGACAGATTTTCG 615 Query 604 CCAAACTCC-AGTGATTTTCCATCTACTTCCATTG----A-C-G--A-CGAC-CT--C-A 649 | || |||| | ||| |||| || | | ||| ||| | | | | | || | | | Sbjct 616 CTAAGCTCCTA-TGAGTTTCAATGTTCCTCCCTTGATATATCAGTCACCAACGATGACAA 674 Query 650 --GTATCAACT-CGCCTCAGTACCAAGCCACAATTCCCCCCG-CAAGC-AGGGAAG-GT- 702 | ||| ||| || ||||| || |||||| ||| | | | || ||| | | || Sbjct 675 TGGAATC-ACTCCGTTTCAGTGCCCAGCCACGATT-GACGAGTTATGCAAGGTAGGAGTA 732 Query 703 GAACGTCTCAA-CACGATCTCTACTGTAAGTTCAACTGG---TAG-T-AT-T-G-AACAT 753 |||| |||||| | |||||||||||||||||||||||| ||| | || | | ||||| Sbjct 733 GAACATCTCAATGA-GATCTCTACTGTAAGTTCAACTGGTAATAGTTCATCTAGAAACAT 791 Query 754 -------CCTCCACCCAACTACGGAATAGAACCACGCCTTAAGGAGA-TGGAAGAAAAGT 805 || |||||| |||||||||||||||||||||||||||| | ||||||||||| Sbjct 792 CGAACAGCCGCCACCCCACTACGGAATAGAACCACGCCTTAAGGA-ACTGGAAGAAAAGA 850 Query 806 TAGATTTTGATAGCCTCGAAACTAAAACTGTTGGAATTGTTGGGATGCCTGGGATTGGTA 865 || | |||||| || |||||||||||| |||||||||||||||||||||||| ||||||| Sbjct 851 TACAATTTGATTGCATCGAAACTAAAATTGTTGGAATTGTTGGGATGCCTGGAATTGGTA 910 Query 866 AAACCACTCTTGCAGAAACGTTGTATAGAAAGTGGGAACACAAGTTTGAGAGGAGTATGT 925 ||||||||||||| ||||| ||||||||||||||| |||||| |||| ||||||| | || Sbjct 911 AAACCACTCTTGCGGAAACATTGTATAGAAAGTGGAAACACAGGTTTAAGAGGAGCAAGT 970 Query 926 TTTTCCCAGATGCCAGTAAGATGGCGAATGAACACGGAATGTGTTGGCTGCAGAAGAGAT 985 || ||||| ||| |||| | | || || | | || | | | | | |||| ||||||| Sbjct 971 TTATCCCAAATGTCAGT-A-A-GGAGAGT-CA-AC-G-A-G-GAT---TGCAAAAGAGAT 1018 Query 986 TATTGGAAGAGCTGTTGAAGGATACTAATCT-CAACATAGGATATACA-ACGAATGAACA 1043 | |||| ||||||||||| ||||| | || | ||| | ||||||| || | ||||||||| Sbjct 1019 TGTTGGTAGAGCTGTTGATGGATATTCAT-TACAAGACAGGATATTCAGA-GAATGAACA 1076 Query 1044 TGAGTTTTGTAAGGATGTTCTTCTCCTAAAGAAAGTTTTTCTTGTCATAGATAATGTTAG 1103 ||||||||||||||||| |||||||| ||||||||||||| |||| |||||| ||||||| Sbjct 1077 TGAGTTTTGTAAGGATGCTCTTCTCCAAAAGAAAGTTTTTGTTGTTATAGATGATGTTAG 1136 Query 1104 TAGCGAGGAACAGATCGAAACTCTTTTTGGTAAATGGAATTGGATTAAAAATGGAAGCAA 1163 |||| ||||||||||| |||||||||||||| ||||| ||||||| ||||| || ||||| Sbjct 1137 TAGCAAGGAACAGATCAAAACTCTTTTTGGTCAATGGGATTGGATCAAAAAAGGTAGCAA 1196 Query 1164 GATTGTTATTACGTCAAGTGATGAGTCAATGCTCAAGGGTTTCGTTAAAGATACTTATGT 1223 |||||||||||| ||||||||||||||| ||||||||| | ||| | ||||||||||| Sbjct 1197 GATTGTTATTACATCAAGTGATGAGTCACTGCTCAAGGAACTGGTTGACGATACTTATGT 1256 Query 1224 AGTCCCAAGTTTGAACAGCAGA-GACAGTCTACTGTGGTTTACTAATCATGCATTTGGTT 1282 |||||| || |||||||||| | || ||| ||||||||||||| ||||| || ||||||| Sbjct 1257 AGTCCCGAGGTTGAACAGCACAGGA-AGTTTACTGTGGTTTACCAATCACGCCTTTGGTT 1315 Query 1283 TGGATGATGCCCAGGGAAACTTGGTAAAGTTGTCCAAACACTTTCTGAATTATGCCAAAG 1342 ||||| ||||| | ||||| || |||||| |||||| ||||||||||||||||||||||| Sbjct 1316 TGGATCATGCCGAAGGAAATTTCGTAAAGCTGTCCAGACACTTTCTGAATTATGCCAAAG 1375 Query 1343 GCAACCCACTAGCCCTCGGAGCTTTTGGTGTAGAACTTTGTGGGAAAGACAAGGCTGATT 1402 | |||||||||| |||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct 1376 GAAACCCACTAGTCCTCAGAGCTTTTGGTGTAGAACTTCGTGGGAAAGACAAGGCTTATT 1435 Query 1403 GGGAAAAGAGAATAAAAACATTGACACTAATTTCCAATAAGATGATCCAAGATGTCTTGA 1462 ||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1436 GGGAACAGAGAATTAAAACATTGAAACTAATTTCCAATAAGATGATCCAAGATGTCTTGA 1495 Query 1463 GAAGAAGGTATGATGAACTCACAGAGAGGCAGAAAGATATTTTTCTTGACGTCGCATGTT 1522 |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 1496 GAAGAAGGTATGATGAACTCACAGAGAGGCAGAAAGATATTTTTCTTGACATTGCATGTT 1555 Query 1523 TCTTCAAATCAGAGAATGAAAGTTATGTACGACACGTGGTGAATTCATGTGATTCTGAGT 1582 ||||| |||||||||||| |||||||||| | | |||| |||||| || | | | Sbjct 1556 TCTTCGAATCAGAGAATGCAAGTTATGTAAGGTGCCTGGTAAATTCAAGT-A---T---T 1608 Query 1583 CTACTAAGAGTTGGGATGAAATAACAGATCTCAAAGGA-AAGTTTCTTGTCAATATTTCT 1641 | | ||||||||||| ||||||| || || |||||||| |||||||||||| Sbjct 1609 C--C---------GGATGAAATAAGAGATCTCCAA-GACAAGTTTCTCGTCAATATTTCT 1656 Query 1642 GGTGGTCGAGTTGAGATGCATGATATACTATGCACATTCGCCAAGGAACTTGCTTCACAA 1701 |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1657 TGTGGTCGATTTGAGATGCATGATATATTATGCACATTCGCCAAGGAACTTGCTTCACAA 1716 Query 1702 GCATTGACTGAAGAT-ACAAGGGTTCATCTCAGGCTGTGGAACTATCAAGATATCATGTG 1760 ||||||||||||| | |||||||||||||||||||||||||| |||||||||||||| || Sbjct 1717 GCATTGACTGAAG-TCACAAGGGTTCATCTCAGGCTGTGGAAATATCAAGATATCATTTG 1775 Query 1761 GTTTCTCAACAATGAATTGGAAATGGAAAATGTCAGAGGTATTTTCTTAGACATGTCTAA 1820 ||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||| | Sbjct 1776 GTTGCTCAACAATAAATTGGAAATGGAAAATGTGAGAGGTATTTTCTTAGACATGTCTGA 1835 Query 1821 AGTTCCGGAGGAAATGACATTTGATGGTAACATCTTTAGCAATATGTGCAATCTTCGATA 1880 ||||||||||||||||| |||||||| ||| |||||| | |||||||||| ||||||| Sbjct 1836 AGTTCCGGAGGAAATGATATTTGATGCTAAAATCTTT--C-GTATGTGCAATATTCGATA 1892 Query 1881 TCTCAAAATATACAGTTCTGTTTGCCATAAGGAAGGCGAAGGTATCTTCAAATTTGACAC 1940 |||||||||||||| |||||| | || |||||||||||||||||||||||||||||||| Sbjct 1893 TCTCAAAATATACAATTCTGTCTACCCTAAGGAAGGCGAAGGTATCTTCAAATTTGACAG 1952 Query 1941 AGTTAGGGAAATT-CAGTTACCATTAGACAAGGTACGCTATCTCCACTGGATGAAATATC 1999 | |||||| | || |||||||||||| | |||||| |||||||||||||||| ||||||| Sbjct 1953 ATTTAGGG-AGTTCCAGTTACCATTAAATAAGGTAAGCTATCTCCACTGGATAAAATATC 2011 Query 2000 CATGGGAGAAACTTCCATCAGACTTCAACCCGGAGAATCTCGTTGATCTTGAACTGCCTT 2059 ||| ||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct 2012 CATTGGATAAACTTCCATCAGACTTCAACCCGGAGAATCTTGTTAATCTTGAACTGCCTT 2071 Query 2060 ATAGCTCCATTAAGAAAGTTTGGGAGGGTGTTAAGGATACCCCGATACTAAAGTGGGCCA 2119 |||||||||||||| |||||||||||||||||||||| ||||| | |||||||||||||| Sbjct 2072 ATAGCTCCATTAAGCAAGTTTGGGAGGGTGTTAAGGAAACCCCAAAACTAAAGTGGGCCA 2131 Query 2120 ATCTAAGCTATTCAAGTAAGTTGACTAACCTTTTAGGGTTGTCAAATGCTAAAAATCTTG 2179 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2132 ATCTCAGCTATTCAAGTAAGTTGACTAACCTTTTAGGGTTGTCAAATGCTAAAAATCTTG 2191 Query 2180 AAAGATTGAATCTTGAAGGTTGCACAAGTTTGCTTAAACTGCCCCAAGAGATGGAGAACA 2239 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 2192 AAAGATTGAATCTTGAAGGTTGCACAAGTTTGCTTAAACTGCCCAAAGAGATGGAGAACA 2251 Query 2240 TGAAAAGTCTTGTCTTCCTGAACATGAGACGTTGCACTAGTCTCACATGTCTTCAAAGTA 2299 || |||||||||| || || ||||||||| |||||| |||||||||| |||||| || | Sbjct 2252 TGGAAAGTCTTGTGTTTCTCAACATGAGAGGTTGCAAGAGTCTCACATTTCTTCATAGGA 2311 Query 2300 TTAAAGTGAGCTCTCTGAA-AATTCTCATACTCAGTGACTGCTCAAAACTTGAGGAATTT 2358 | || |||||||||| || ||| |||||||||||||||||||||||||||||||||||| Sbjct 2312 TGAATTTGAGCTCTCT-AACAATCCTCATACTCAGTGACTGCTCAAAACTTGAGGAATTT 2370 Query 2359 GAGGTGATTTCGGAAAATCTGGAAGAATTATATTTAGATGGAACTGCAATAAAGGGACTT 2418 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 2371 GAGGTGATTTCGGAAAATCTGGAAGCGTTATATTTAGATGGAACTGCAATAAAGGGACTT 2430 Query 2419 CCTCCAGCGG-CCGGGGATCTGACGAGACTTGTCGTCTTAAATATGGAAGGCTGTACAGA 2477 |||||| | | ||||| |||||| |||||||| | | || |||||| |||| |||||||| Sbjct 2431 CCTCCAACCGTCCGGG-ATCTGAAGAGACTTGCCATATTGAATATGAAAGGTTGTACAGA 2489 Query 2478 ACTGGAGAGTCTTCCCAAACGTCTTGGAAAACAGAAAGCTCTTCAAGAACTGGTACTCTC 2537 ||||||||||||||| || ||||||||||||| ||||||||| ||||||| ||||||| Sbjct 2490 ACTGGAGAGTCTTCCTGAATGTCTTGGAAAACAAAAAGCTCTTGAAGAACTCATACTCTC 2549 Query 2538 TGGAT-GTTCAAAGCTCGAGAGCGTTCCAACGGAC-GTAAAAGACATGAAACA-TCTACG 2594 | || |||||||||| ||||| ||||||| || | |||||| |||||||| | | |||| Sbjct 2550 TA-ATTGTTCAAAGCTTGAGAGTGTTCCAAAGG-CTGTAAAAAACATGAAAAAAT-TACG 2606 Query 2595 GCTCTTATTGCTTGACGGCACAAGAATCAGAA-AGATCCCGAAGATAAAGTCGCTAAAGT 2653 | ||||||||||||| ||||||||||||| || | |||||||||||||| |||||| || Sbjct 2607 GATCTTATTGCTTGATGGCACAAGAATCA-AAGATATCCCGAAGATAAACTCGCTAGAGC 2665 Query 2654 GTTTGTGCTTAAGTAGAAATATTGCAATGGTCAATCTACAAGATAATCTCAAAGATTTCT 2713 |||||| |||||||||||||||||||||| || |||| ||||||| ||||| | |||| Sbjct 2666 GTTTGTCCTTAAGTAGAAATATTGCAATGATCCATCTGCAAGATAGTCTCAGTGGGTTCT 2725 Query 2714 CTAATCTGAAATGTCTTGTCATGAAGAACTGCGAGAATCTCAGATATCTTCCTTCGCTTC 2773 |||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 2726 CTAACCTGAAATGTGTTGTCATGAAGAACTGCGAGAATCTCAGATATCTTCCATCGCTTC 2785 Query 2774 CAAAATGTCTTGAGTACCTAAACGTATATGGTTGTGAAAGACTAGAATCAGTTGAGAATC 2833 || || ||||||||| |||||||||||||||||||||||||||||| |||||||||||| Sbjct 2786 CACGATCTCTTGAGTATCTAAACGTATATGGTTGTGAAAGACTAGAAACAGTTGAGAATC 2845 Query 2834 CACTGGT-TG-CTGATAGGTTAACGTTATTCCTTGATAGATCT-GAGGA-ATTACGTTCC 2889 ||||||| | | | | |||| | ||| | | || | || ||| | || |||||| Sbjct 2846 CACTGGTCTTTC-G-TGGGTT--CTTTAATG-TA-ATTCAGCTTGAGAAGATC-CGTTCC 2898 Query 2890 ACTTTCTTGTTCACTAATTGCCACAATCTGTTTCAAGATGCAAAGGACTCAATCTCAACC 2949 ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| || Sbjct 2899 ACTTTCTTGTTCACTAATTGCAACAATCTGTTTCAAGATGCAAAGGAGTCAATCTCATCC 2958 Query 2950 TACGCGAAATGGAAATGCCACCGACTTGCAGTTGAATGCTACGAACAGGACATAGTTTCT 3009 ||||| ||||||||||||||| |||||||| |||| |||||| || || ||||||||| Sbjct 2959 TACGCAAAATGGAAATGCCACAGACTTGCACTTGACTGCTACCAATTGGGCATAGTTTCA 3018 Query 3010 GGAGCTTTTTTCAACACTTGCTATCCTGGATATATAGTCCCTTCGTGGTTCGA-TCACCA 3068 ||||||||||||||||||||||||||||||| ||||||||||||||||||| | | |||| Sbjct 3019 GGAGCTTTTTTCAACACTTGCTATCCTGGATTTATAGTCCCTTCGTGGTTCCACT-ACCA 3077 Query 3069 AGCAGTTGGATCAGTCTTAGAGCCAAGGCTGGAACCACATTGGTATAACACTATGCTTT- 3127 |||||||||||||||||| |||||||||||| || ||||||||| ||||| |||||||| Sbjct 3078 AGCAGTTGGATCAGTCTTTGAGCCAAGGCTGAAATCACATTGGTGTAACAATATGCTTTA 3137 Query 3128 CTGGGATAGCTCTATGTGCAGTTGTATCATTCCATGAGAACCAAGATCCGATCATCGGCA 3187 | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct 3138 C-GGGATAGCTCTATGTGCAGTTGTCTCATTCCATGAGAACCAAGATCCGATCATCGACA 3196 Query 3188 GTTTCTCAGTAAAATGCACATTGCAATTTGAAAACGAAGATGGGTCTC-T-TC-GCTTTG 3244 |||||||||||||||||||| |||| |||||||||||||| ||||||| | || | |||| Sbjct 3197 GTTTCTCAGTAAAATGCACACTGCAGTTTGAAAACGAAGACGGGTCTCGTATCCGATTTG 3256 Query 3245 ATTGTGATATCGGATGTTTGAACGAA-CCAGGAATGA-TTGAGGCAGACCATGTTTTTAT 3302 |||||||||||||| |||||| | || ||||||| || ||| |||||||||||||||||| Sbjct 3257 ATTGTGATATCGGAAGTTTGA-CAAAACCAGGAA-GAATTGGGGCAGACCATGTTTTTAT 3314 Query 3303 CGGCTATGTCACTTGCTCACGTTTGAAAGATCACCACTCTATACCTATTCATCACCCTAC 3362 |||||||||| |||||||||||||||||||| || |||||||||||||| |||||||||| Sbjct 3315 CGGCTATGTCCCTTGCTCACGTTTGAAAGATTACTACTCTATACCTATTTATCACCCTAC 3374 Query 3363 A-ACTGTAAAAATGCAGTTCCACTTGACTGATG-CTTGTAAAAGTAAAGTGGTGGATTGT 3420 | | ||||||| || ||||| ||||| |||||| || |||||||| |||||||||||||| Sbjct 3375 ATA-TGTAAAAGTGGAGTTCTACTTGCCTGATGGCT-GTAAAAGTGAAGTGGTGGATTGT 3432 Query 3421 GGGTTCCGTTTGATGTAC 3438 |||||||||||||||||| Sbjct 3433 GGGTTCCGTTTGATGTAC 3450 > Ahg915685 jgi|Araly1|915685|Al_scaffold_0008_436 Length=2241 Score = 2093 bits (1133), Expect = 0.0 Identities = 1580/1792 (88%), Gaps = 46/1792 (3%) Strand=Plus/Plus Query 748 GAACA-TCCTCCACCCAACTACGGAATAGAACCACGCCTTAAGGAGA-TGGAAGAAAAGT 805 ||||| | |||||||| ||||||||||||||| ||||||||||| | | |||| |||| Sbjct 475 GAACAGT-CTCCACCCCACTACGGAATAGAACTGCGCCTTAAGGA-ACTAGAAGGAAAGA 532 Query 806 TAGATTTTGATAGCCTCGAAACTAAAACTGTTGGAATTGTTGGGATGCCTGGGATTGGTA 865 || | |||||| || | ||||||| | |||||||||||||||||||||||||||||||| Sbjct 533 TACAATTTGATTGCGTAGAAACTATGATTGTTGGAATTGTTGGGATGCCTGGGATTGGTA 592 Query 866 AAACCACTCTTGCAGAAACGTTGTATAGAAAGTGGGAACACAAGTTTGAGAGGAGTATGT 925 ||||||||||||| ||||| |||||||| |||||||||||||||||||||||||| |||| Sbjct 593 AAACCACTCTTGCGGAAACATTGTATAGGAAGTGGGAACACAAGTTTGAGAGGAGCATGT 652 Query 926 TTTTCCCAGATGCCAGTAAGATGGCGAATGAACACGGAATGTGTTGGCTGCAGAAGAGAT 985 |||||||||||| |||||||||||||| | ||| | | | | | |||||||||||| Sbjct 653 TTTTCCCAGATGTCAGTAAGATGGCGAGTCAAC-C---A-G-GAT---TGCAGAAGAGAT 703 Query 986 TATTGGAAGAGCTGTTGAAGGATACTAATCT-CAACATAGGATATACA-ACGAATGAACA 1043 |||||||||||||||||||||||| | || | ||| | |||||||||| | ||||||||| Sbjct 704 TATTGGAAGAGCTGTTGAAGGATATTCAT-TACAAGACAGGATATACAGA-GAATGAACA 761 Query 1044 TGAGTTTTGTAAGGATGTTCTTCTCCTAAAGAAAGTTTTTCTTGTCATAGATAATGTTAG 1103 ||||||||||||||||| ||||||| ||||||||||||| |||| |||||| ||||||| Sbjct 762 TGAGTTTTGTAAGGATGATCTTCTCGAAAAGAAAGTTTTTGTTGTTATAGATGATGTTAG 821 Query 1104 TAGCGAGGAACAGATCGAAA-CTCTTTTTGGTAAATG-GAATTGGATTAAAAATGGAAGC 1161 |||| |||||||| || ||| ||||||||||| |||| | ||||||| ||||| || ||| Sbjct 822 TAGCAAGGAACAGCTC-AAATCTCTTTTTGGTCAATGTG-ATTGGATCAAAAAAGGTAGC 879 Query 1162 AAGATTGTTATTACGTCAAGTGATGAGTCAATGCTCAAGGGTTTCGTTAAAGATACTTAT 1221 |||||||||||||| ||||||||| ||||| ||||||||| | ||| | ||||| ||| Sbjct 880 AAGATTGTTATTACATCAAGTGATAAGTCACTGCTCAAGGAACTGGTTGACGATACCTAT 939 Query 1222 GTAGTCCCAAGTTTGAACAGCAGAGACAGTCTACTGTGGTTTACTAATCATGCATTTGGT 1281 ||||||||||| |||||||||||||||||| ||||||||||||| ||||| || |||||| Sbjct 940 GTAGTCCCAAGGTTGAACAGCAGAGACAGTTTACTGTGGTTTACCAATCACGCCTTTGGT 999 Query 1282 TTGGATGATGCCCAGGGAAACTTGGTAAAGTTGTCCAAACACTTTCTGAATTATGCCAAA 1341 |||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||| Sbjct 1000 TTGGATGATGCCGAGGGAAACTTCGTAAAGTTGTCCACACACTTTCTGAATTATGCCAAA 1059 Query 1342 GGCAACCCACTAGCCCTCGGAGCTTTTGGTGTAGAACTTTGTGGGAAAGACAAGGCTGAT 1401 ||||||||||||| |||| |||||||||||||||||||| ||||||||||| ||||| || Sbjct 1060 GGCAACCCACTAGTCCTCAGAGCTTTTGGTGTAGAACTTCGTGGGAAAGACGAGGCTTAT 1119 Query 1402 TGGGAAAAGAGAATAAAAACATTGACACTAATTTCCAATAAGATGATCCAAGATGTCTTG 1461 |||||| |||| || |||| || ||| || |||||||||||||||||| |||||||| Sbjct 1120 TGGGAACAGAGGATTGGAACACTGGCACAAAGCTCCAATAAGATGATCCAATATGTCTTG 1179 Query 1462 AGAAGAAGGTATGATGAACTCACAGAGAGGCAGAAAGATATTTTTCTTGACGTCGCATGT 1521 |||| ||| ||||||||||||||||||||||| |||||| |||||||||||| |||||| Sbjct 1180 AGAAAAAGATATGATGAACTCACAGAGAGGCAAAAAGATGCTTTTCTTGACGTTGCATGT 1239 Query 1522 TTCTTCAAATCAGAGAATGAAAGTTATGTACGACACGTGGTGAATTCATGTGATTCTGAG 1581 ||||||||||||||||||| ||||||||||||| | |||| ||||||||||| ||| || Sbjct 1240 TTCTTCAAATCAGAGAATGTAAGTTATGTACGATGCTTGGTAAATTCATGTGAATCTAAG 1299 Query 1582 TCTACTAAGAG-TTGGGATGAAATAACAGATCTCAAAGGA-AAGTTTCTTGTCAATATTT 1639 ||||||| | | |||| |||| |||| ||||||| || || |||||||| |||||||||| Sbjct 1300 TCTACTATG-GTTTGGCATGACATAAGAGATCTCCAA-GACAAGTTTCTCGTCAATATTT 1357 Query 1640 CTGGTGGTCGAGTTGAGATGCATGATATACTATGCACATTCGCCAAGGAACTTGCTTCAC 1699 ||||||||||||||||||||||||||||| |||| |||||||| |||||| ||||||||| Sbjct 1358 CTGGTGGTCGAGTTGAGATGCATGATATAGTATGTACATTCGCTAAGGAAATTGCTTCAC 1417 Query 1700 AAGCATTGACTGAAG---ATACAAGGGTTCATCTCAGGCTGTGGAACTATCAAGATATCA 1756 |||||||||| |||| |||||| ||||||||||| ||| |||||||||||||||||| Sbjct 1418 AAGCATTGACCGAAGAAAATACAAAGGTTCATCTCATGCTCCGGAACTATCAAGATATCA 1477 Query 1757 TGTGGTT-TCTCAACAATGAATTGGAAATGGAAAATGTCAGAGGTATTTTCTTAGACATG 1815 | | ||| || || ||| ||||||||||| |||||||||||||||| |||||||||||| Sbjct 1478 T-TTGTTGGCTGAAGAATAAATTGGAAATGAAAAATGTCAGAGGTATATTCTTAGACATG 1536 Query 1816 TCTAAAGTTCCGGAGGAAATGACATTTGATGGTAACATCTTTAGCAATATGTGCAATCTT 1875 ||| ||||||||||||||| || ||||||| | ||||||||||||| |||||||||||| Sbjct 1537 TCTGAAGTTCCGGAGGAAACGATATTTGATTCTCACATCTTTAGCAAAATGTGCAATCTT 1596 Query 1876 CGATATCTCAAAATATACAGTTCTGTTTGCCATAAGGAAGGCGAAGGTATCTTCAAATTT 1935 |||||||||||||||| || ||||| |||| |||| |||||||||||||||||| |||| Sbjct 1597 CGATATCTCAAAATATGCACTTCTGCCTGCCCTAAGCAAGGCGAAGGTATCTTCACATTT 1656 Query 1936 GACACAGT-TAGGGAAATTCAG-TTACCATTAGACAAGGTACGCTATCTCCACTGGATGA 1993 |||| | || |||||||| | ||||||||| | |||||||| |||||||||||||||| Sbjct 1657 GACA-TCTATAAGGAAATTC-GCTTACCATTACATAAGGTACGGTATCTCCACTGGATGA 1714 Query 1994 AATATCCATGGGAGAAACTTCCATCAGACTTCAACCCGGAGAATCTCGTTGATCTTGAAC 2053 ||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||| Sbjct 1715 AATATCCATGGGAGAAACTGCCATCAGACTTCAACCCGAAGAATCTTGTTGATCTTGAAC 1774 Query 2054 TGCCTTATAGCTCCATTAAGAAAGTTTGGGAGGGTGTTAAGGATACCCCGATACTAAAGT 2113 |||||||||||||||||||| ||||||||| |||||| ||||||||||| | |||||||| Sbjct 1775 TGCCTTATAGCTCCATTAAGCAAGTTTGGGTGGGTGTAAAGGATACCCCAAAACTAAAGT 1834 Query 2114 GGGCCAATCTAAGCTATTCAAGTAAGTTGACTAACCTTTTAGGGTTGTCAAATGCTAAAA 2173 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1835 GGGCCAATCTCAGCTATTCAAGTAAGTTGACTAACCTTTTAGGGTTGTCAAATGCTAAAA 1894 Query 2174 ATCTTGAAAGATTGAATCTTGAAGGTTGCACAAGTTTGCTTAAACTGCCCCAAGAGATGG 2233 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1895 ATCTTGAAAGATTGAATCTTGAAGGTTGCACAAGTCTGCTTAAACTGCCCCAAGAGATGG 1954 Query 2234 AGAACATGAAAAGTCTTGTCTTCCTGAACATGAGACGTTGCACTAGTCTCACATGTCTTC 2293 | |||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||| Sbjct 1955 AAAACATGAAAAGTCTTGTCTTCCTGAATATGAGACGTTGCACGAGTCTCACATTTCTTC 2014 Query 2294 AAAGTATTAA-AGTGAGCTCTCTGAAAATTCTCATACTCAGTGA-CTGC-TCAAAACTTG 2350 |||| || || | |||| |||||||||||||||||||||||||| | | | | || Sbjct 2015 AAAGAATGAATA-TGAGTTCTCTGAAAATTCTCATACTCAGTGAACCACATGGTA-CTC- 2071 Query 2351 AGGAATTTGAGGTGATT--TCGGAAAATCTGGAAGAATTATATTTAGATGGAACTGCAAT 2408 ||| || | | || |||||||||||||||| |||||||||||||||||||||||| Sbjct 2072 AGGGG---GACG-GCTTCCTCGGAAAATCTGGAAGCATTATATTTAGATGGAACTGCAAT 2127 Query 2409 AAAGGGACTTCCTCCAGCGGCCGGGGATCTGACGAGACTTGTCGTCTTAAATATGGAAGG 2468 ||||||||| |||||||| |||||||||||| |||||||| | ||||||||||| |||| Sbjct 2128 AAAGGGACTCCCTCCAGCCACCGGGGATCTGATGAGACTTGCCATCTTAAATATGAAAGG 2187 Query 2469 CTGTACAGAACTGGAGAGTCTTCCCAAACGTCTTGGAAAACAGAAAGCTCTT 2520 ||||||||||| |||||||||||||||| ||||||||| |||||||||||| Sbjct 2188 ATGTACAGAACTAGAGAGTCTTCCCAAACATCTTGGAAACCAGAAAGCTCTT 2239 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 132668699478 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5