BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G45530.1 Length=2452 Score E Sequences producing significant alignments: (Bits) Value Ahg494430 jgi|Araly1|494430|fgenesh2_kg.8__246__AT5G45530.1 3624 0.0 Ahg915539 jgi|Araly1|915539|Al_scaffold_0008_290 1877 0.0 Ahg915804 jgi|Araly1|915804|Al_scaffold_0008_555 1310 0.0 > Ahg494430 jgi|Araly1|494430|fgenesh2_kg.8__246__AT5G45530.1 Length=2435 Score = 3624 bits (1962), Expect = 0.0 Identities = 2281/2437 (94%), Gaps = 13/2437 (1%) Strand=Plus/Plus Query 18 AACGAGCTTAGTTTTTCCACACCAAAAGAGTAACAACGATGCAAGTGATTCCACCAGCAA 77 ||||||||||||||||||| || |||||||||| ||| |||||||||||||||||| || Sbjct 1 AACGAGCTTAGTTTTTCCAGACAAAAAGAGTAATAACAATGCAAGTGATTCCACCAAAAA 60 Query 78 TAAAAAAGATATTAGACAAATGGAACATCAGAGGACTTGTGATAATGTCTCTGTTGTTCC 137 ||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||| Sbjct 61 TAAAAAAGATATTAGACAAGTGGAACATCAGAGGACTTGTGATATTATCTCTGTTGTTCC 120 Query 138 AAACGTCTCTTATCTTCCTTGCACCAATGCGGAAACGCACATCAAAGAAGTTGCTCGCCG 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 121 AAACGTCTCTTATCTTCCTTGCACCAATGCGGAAACGCACATCAAAGAAGTTGCTCGCTG 180 Query 198 CGGTTCTATGGACAGCATATCTTTTAGCGGATTGGACCGCTAATTATGCGGTGTCTCAGA 257 || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 CGTTTCTATGGACCGCATATCTTTTAGCGGATTGGACCGCTAATTATGCGGTGTCTCAGA 240 Query 258 TCACTAAGAACCAAGGAAAAGAAACAGAACCTGGCGATCCTCCAAAAAACAAGAAGCTTC 317 ||||||| |||||||| |||||| ||||||||| |||||||||||||||||||||||||| Sbjct 241 TCACTAAAAACCAAGGGAAAGAACCAGAACCTGACGATCCTCCAAAAAACAAGAAGCTTC 300 Query 318 TTGCTCTATGGGCACCATTCTTGTTGTTGCATCTTGGTGGGCCGGACACGATAACCGCGT 377 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 301 TTGCTCTATGGGCACCATTCTTGTTGTTGCATCTTGGTGGTCCGGACACGATAACCGCGT 360 Query 378 TGGCTCTTGAGGATAATGCGTTATGGCAACGTCATTTGTTTGGCCTCGTCTCTCAAGCTC 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 361 TGGCTCTTGAGGATAATGCGTTATGGCAACGTCATTTGTTTGGCCTCGTCTCTCAAGCGC 420 Query 438 TTGCAGGTGTTTATGCGGTGGTGCAATCGCTAGAAAACGTATTATGGCCACCAATTACAC 497 ||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||| Sbjct 421 TTGCAGGTGTTTATGCGGTGGTGCAATCGCTAGAAAACGCACTATGGCCACCAATCACAC 480 Query 498 TTTTATTCATCACAGGAACGATTAAGTACGTGGAGAGGACACGAGCATTGTACTCAGCGA 557 ||||||||||||| | ||||||||| |||||||||||| ||||||||||||||||||||| Sbjct 481 TTTTATTCATCACCGCAACGATTAAATACGTGGAGAGGTCACGAGCATTGTACTCAGCGA 540 Query 558 GCTTAGACAAATTCAAAGACAGAATGCTTCAACGAGCAGACGCTGGTTCTAACTACGCTA 617 |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 541 GCTTGGACAAATTCAAAGACAGAATGCTTCAACGAGCAGACGCTGGTCCTAACTACGCTA 600 Query 618 AGCTAATGGAAGAATTCGCTTCAAGAAAA-ATGTCAAATCTCCCAACTGAAATCTTCTTA 676 ||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||| Sbjct 601 AGCTAATGGAAGAATACGCTTCAAGAAAAGA-GTCAAATCTCCCAACTGAAATCTTCTTA 659 Query 677 ACCGACGAACCCGACAAGCACGAGAGACCCCCTACACTCGTTAAACCGGACCGAGATTTA 736 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 660 ACCGACGAACCCGACAAGCACGAGAGACCCCCTACACTCGTTAAACCGGACCGAGATTTA 719 Query 737 ACCGATCTCGAAATCGTTCAATACGGTTTCAAATTCTTCAACACTTTCAAAGGTCTTGTT 796 |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct 720 ACCGATCTCGAAATCGTTCAATACGGCTACAAATTCTTCAACACTTTCAAAGGTCTTGTT 779 Query 797 GTTGATCTCATTTTCAGTTTCCGTGAGCGAGACGAAAGTAGAGATTTCTTCAA-AGAGTT 855 |||||||| ||||||||||||||||||||||||||||| |||||||||||||| | |||| Sbjct 780 GTTGATCTTATTTTCAGTTTCCGTGAGCGAGACGAAAGCAGAGATTTCTTCAATA-AGTT 838 Query 856 GAAACCTGGAGAAGCTCTTCGAATTATCGAAACCGAGCTCGGTTTTCTTTACGAATCGAT 915 |||||| |||||||||||||| ||||||||||||||||| || ||||| ||||||||||| Sbjct 839 GAAACCGGGAGAAGCTCTTCGGATTATCGAAACCGAGCTTGGATTTCTATACGAATCGAT 898 Query 916 GTATACCAAAACCGCAATTCTTCATACCGGAATCGGTACTCTGTTTCGGTTAATTTCCTT 975 |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 899 GTATACGAAAACCGCAATTCTTCATACGGGAATCGGTACTCTGTTTCGGTTAATTTCCTT 958 Query 976 TGGATCACTTCTTTCTTCCTTCTTTGTCTTCCATCGTAGACCGCTAAAGTCCGAAG-ATT 1034 |||||| |||||||||||||||||||||||||||||||| || || ||||| ||| ||| Sbjct 959 TGGATCGCTTCTTTCTTCCTTCTTTGTCTTCCATCGTAGGCCACTTAAGTCT-AAGGATT 1017 Query 1035 TTCATGGAGCAGATGTGGTGATTACTTACGTTTTGTTTATAGTTGGTATCGCGCTTGATC 1094 |||||||||||||||| ||||| |||||| |||||||||||||||||||||| ||||||| Sbjct 1018 TTCATGGAGCAGATGTTGTGATCACTTACATTTTGTTTATAGTTGGTATCGCACTTGATC 1077 Query 1095 TTGCGTCAATGGTCATTTTCTTGCTCTCGGATTGGACATTCGCAGTACTAAGAAACCTTA 1154 ||||||||||||||||||||||||||||||||||||||||||| ||| | ||||| |||| Sbjct 1078 TTGCGTCAATGGTCATTTTCTTGCTCTCGGATTGGACATTCGCGGTATTGAGAAAGCTTA 1137 Query 1155 AGGATGATCCAGAGGAAAAGAGTACT--T-CTATCGACTCTTTATTCAACTGGTTTCTCG 1211 ||||||||||||||||||||| || | | ||||||||| |||| |||| |||||||||| Sbjct 1138 AGGATGATCCAGAGGAAAAGAATAATAGTTCTATCGACTTTTTACTCAATTGGTTTCTCG 1197 Query 1212 AGTTTAGGAAACCCCGTTGGAAGAAGCATACATGCAACGGAAACCAAACCCACGAGGTAC 1271 |||||||||||| ||||||||| |||||||||||||||||||||| |||||| |||| | Sbjct 1198 CGTTTAGGAAACCGCGTTGGAAGGAGCATACATGCAACGGAAACCAGACCCACAAGGTGC 1257 Query 1272 TCTCGACGGGGTTTTT-TACACGTAGATGGTCAGGCACGATCTACGGATTTAACTTCATC 1330 |||||||||||||||| | |||| ||||||||||||||||||||||||||||| |||||| Sbjct 1258 TCTCGACGGGGTTTTTGT-CACGGAGATGGTCAGGCACGATCTACGGATTTAATTTCATC 1316 Query 1331 GGGTTTTGTCTTAAAGCCAAAGTTTCAAGAATCCACCAGAAGAGAAACTGTAACCTATTA 1390 || |||||||| ||||||||||||||||||||||| ||||||||||||| || | ||| Sbjct 1317 GGATTTTGTCTGAAAGCCAAAGTTTCAAGAATCCATAAGAAGAGAAACTGCAATGTTTTA 1376 Query 1391 GTGTGGGATTACGTGGTTTCGCTATTCGATCTAGTGATAAGAAGAATCCAAATGATGATT 1450 |||||||| | ||||||| | ||||||||||| ||||| ||||||||| ||||| || || Sbjct 1377 GTGTGGGAATCCGTGGTTACACTATTCGATCTGGTGATCAGAAGAATCAAAATGTTGTTT 1436 Query 1451 GGATGGATCAAGAATGTTAATAGATCAATAAGAAGCGTGCTCCGGCAATGGTCTAAGAAG 1510 |||| ||||||||||||||||||||||||||||||||||||||| | |||||||| ||| Sbjct 1437 GGATCGATCAAGAATGTTAATAGATCAATAAGAAGCGTGCTCCGACGGTGGTCTAAAAAG 1496 Query 1511 AATCCGATGATTCGTTGCACAGTTTACCCGTTATATC-TCGTGTTCTTCGCCGGTATTCC 1569 |||| ||||||||||| ||| ||||| ||| ||| || |||| ||||| ||||||||||| Sbjct 1497 AATCGGATGATTCGTTACACGGTTTATCCGATAT-TCCTCGTATTCTTTGCCGGTATTCC 1555 Query 1570 TGAAGTATTCAGAGTCCTTTGGAAATACATTGATCGAATCTTTAGTGTTACATCTTATCT 1629 |||||| || |||||||||||||||||| ||||||||||||| ||||||| | |||| || Sbjct 1556 TGAAGTTTTTAGAGTCCTTTGGAAATACGTTGATCGAATCTTCAGTGTTAAAACTTACCT 1615 Query 1630 AGACGGGATTAGGTTCATTTCGAGAGAGCCTTTGACGAAGAATCAATGGGAGTTTATATT 1689 ||||| |||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct 1616 AGACGAGATTAGGTTCATTTCGAGAGAGCCGTTGACGAAGAATCAATGGGAATTTATATT 1675 Query 1690 CAATGAGGTCAAGGATAAGTCGGGGTTTGCGGAAACGCCTGAAGTTGCAAAGAAAGTGTC 1749 ||||||| | ||||||||||| | ||||||||||| ||||||||||||||||||||||| Sbjct 1676 CAATGAGCTGAAGGATAAGTCCAGCTTTGCGGAAACACCTGAAGTTGCAAAGAAAGTGTC 1735 Query 1750 TTGGGCGAGAGGAGAATGGGCTTTACGAGATTCGAAATTGATGGAAGTTGATACGTTGAT 1809 ||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||| Sbjct 1736 TTGGGCGAGAGGAGAATGGGCTTTACGAGATTCAAAATTGGCGGAAGTTGATACATTGAT 1795 Query 1810 GCGTTACATAGAGAAAGTTGATTATGATCAAAGTCTTCTCCTTTGGCACATTGCTACTGA 1869 |||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct 1796 GCGTTATATAGAGAAAGTTGATTATGATCAAAGTCTCCTCCTTTGGCATATTGCTACTGA 1855 Query 1870 GCTCTGTTTTCAAAAAGAAGAAGGTGGGAAGATGGAGAAGCTGAGCAGAGAAGGTTATGA 1929 ||||||||||||||||||||| | ||||||||||||||| ||||||| |||| ||||||| Sbjct 1856 GCTCTGTTTTCAAAAAGAAGATGATGGGAAGATGGAGAATCTGAGCAAAGAAAGTTATGA 1915 Query 1930 TGACCGAGAATTCAGCAAGATTATATCGGACTACATGATGTATTTGTTGATAATGCGACC 1989 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1916 TGACCGAGAATTCAGCAAGATTATATCGGATTACATGATGTATTTGTTGATAATGCGACC 1975 Query 1990 GAAGCTAATGTCGGAAGTGGCGGGAATCGGGACTATACGGTTTAGAGATACTAAAGCTGA 2049 ||| || ||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct 1976 GAAACTGATGTCGGAAGTGGCGGGAATCGGGACTATACGGTTCAGAGACACTAAAGCTGA 2035 Query 2050 AGCTGAGAGGTTTTTCAAAGGAAGGCAAATCAAGGACTTGAGAGATATGAAACGAGCGAG 2109 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 2036 AGCTGAGAGGTTTTTCAAAGGACGGCAAATCAAGGACTTGAGAGATATGAAACGAGCGAG 2095 Query 2110 TGAGACGGTTCTATTGGTTAGTAACGATATTGAGCCGATACTTGTGAAGGGAGATCGAAG 2169 |||||||||| |||||||||||| ||||||||| ||||| |||||||||||||||||||| Sbjct 2096 TGAGACGGTTTTATTGGTTAGTACCGATATTGAACCGATTCTTGTGAAGGGAGATCGAAG 2155 Query 2170 CAAGTCGGTTCTTTTCGATGCGAGTATGTTGGCGAAAGAGCTTCAGAACTTGAAAGAGAG 2229 ||||||||||||||| ||||||||||||||||| ||| |||||||||| |||||||| || Sbjct 2156 CAAGTCGGTTCTTTTTGATGCGAGTATGTTGGCCAAAAAGCTTCAGAATTTGAAAGACAG 2215 Query 2230 TAGTAATGAAGATGGGAAATGGAGAGTGTTGAGCAAAGTGTGGGTTGAGTTGCTATGTTA 2289 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 2216 TAGTAATGAAGATGGGAAATGGAAAGTGTTGAGCAAAGTGTGGGTTGAGTTGCTATGTTA 2275 Query 2290 CGCAGCAAGTCATTGTAAAGCGACGGAGCATGTGGCGCAACTTAGCAGAGGTGGTGAGCT 2349 ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct 2276 CGCAGCAAGTCATTGTAAAGCGACGGAACATGTGGCGCAACTTAGCAGAGGCGGTGAGCT 2335 Query 2350 TCTTAACTTTGTTTGGTTGTTGATGGCTCACTTCGGATTAGGAGATCAGTTTCAGATCAA 2409 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 2336 ACTTAACTTTGTTTGGTTGTTGATGGCTCACTTTGGATTAGGAGATCAGTTTCAGATCAA 2395 Query 2410 TAAAGGTGATGCTAGAGCTAAACTCGTTGTAGGAGAG 2446 |||||| |||||||||||||||||||||||||||||| Sbjct 2396 TAAAGGAGATGCTAGAGCTAAACTCGTTGTAGGAGAG 2432 > Ahg915539 jgi|Araly1|915539|Al_scaffold_0008_290 Length=2250 Score = 1877 bits (1016), Expect = 0.0 Identities = 1527/1771 (86%), Gaps = 46/1771 (3%) Strand=Plus/Plus Query 702 GACCCCCTACACTCGTTAAACCGGACCGAGATTTAACCGATCTCGAAATCGTTCAATACG 761 ||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 497 GACCCCCGAAACTCGTTAGACCGGACCGAGATTTAACCGATCTCGAAATCGTTCAATACG 556 Query 762 GTTTCAAATTCTTCAACACTTTCAAAGGTCTTGTTGTTGATCTCATTTTCAGTT-TCCGT 820 | | ||||||||||||||||||||||||||||||||||||||| ||||||||| | || Sbjct 557 GCTACAAATTCTTCAACACTTTCAAAGGTCTTGTTGTTGATCTTGTTTTCAGTTCTA-GT 615 Query 821 GAGCGAGACGAAAGTAGAGATTTCTTCAAAGAGTTGAAACCTGGAGAAGCTCTTCGAATT 880 |||||||||||||| |||||||||||||| ||||||||||| |||||||| || | ||| Sbjct 616 GAGCGAGACGAAAGCAGAGATTTCTTCAATGAGTTGAAACCGGGAGAAGCACTAAGGATT 675 Query 881 ATCGAAACCGAGCTCGGTTTTCTTTACGAATCGATGTATACCAAAACCGCAATTCTTCAT 940 || ||| ||||||| | |||||| ||||||| ||||| ||| ||||| || |||||||| Sbjct 676 ATTGAATCCGAGCTTGATTTTCTATACGAATTGATGTTTACTAAAACTGCGATTCTTCAC 735 Query 941 ACCGG-AATCGGTACTCTGTTTCGGTTAATTTCCTTTGGATCACTTCTTTCTTCCTTCTT 999 || | || |||||||||||||||||||||| | |||||||||||| ||||||||||||| Sbjct 736 AC-GATAACCGGTACTCTGTTTCGGTTAATTGCGTTTGGATCACTTATTTCTTCCTTCTT 794 Query 1000 TGTCTTCCATCGTAGACCGCTAAAGTCCGAAGATTTTCATGGAGCAGATGTGGTGATTAC 1059 ||||||||||||||| ||||| ||||| || || |||||||||||||| | |||||||| Sbjct 795 TGTCTTCCATCGTAGGCCGCTTAAGTCTGAGGAATTTCATGGAGCAGACATTGTGATTAC 854 Query 1060 TTACGTTTTGTTTATAGTTGGTATCGCGCTTGATCTTGC-GTCAATGGTCATTTTCTTGC 1118 |||| ||||| || |||||||||||||||||||| | |||||| ||||| |||||| Sbjct 855 TTACACATTGTTCATCGTTGGTATCGCGCTTGATCTC-CTGTCAATAGTCATGTTCTTGT 913 Query 1119 TCTCGGATTGGACAT-TCGCAGTACTAAGAAACCTTAAGGATGATCCAGAGGAAAAGAGT 1177 ||||||||||||||| | || ||| | || || ||||||||||||||||||||| | | | Sbjct 914 TCTCGGATTGGACATAT-GCGGTATTGAGTAAGCTTAAGGATGATCCAGAGGAATATAAT 972 Query 1178 ACTTCTATCGACTCTTTATTCAACTGGTTTCTCGAGTTTAGGAAACCCCGTTGGAAGAAG 1237 | || ||||||||||||| |||| |||||||||| ||||||||||| ||||| |||||| Sbjct 973 AGTTTTATCGACTCTTTACTCAATTGGTTTCTCGCGTTTAGGAAACTGCGTTGTAAGAAG 1032 Query 1238 CATACATGCAACGGAAACCAAACCCACGAGGTACTCTCGACGGGGTTTTT-TACACGTAG 1296 ||||||||||| |||||||| ||||||||||| |||||||||||||||| | |||| || Sbjct 1033 CATACATGCAATGGAAACCATACCCACGAGGTGCTCTCGACGGGGTTTTGGT-CACGGAG 1091 Query 1297 ATGGTCAGGCACGATCTACGGATTTAACTTCATCGGGTTTTGTCTT-AAAGCCAAAGTTT 1355 ||||||||||| |||||||||||| || ||||||||||||||| || ||||||||||||| Sbjct 1092 ATGGTCAGGCATGATCTACGGATTCAATTTCATCGGGTTTTGT-TTGAAAGCCAAAGTTT 1150 Query 1356 CAAGAATCCACCAGAAGAGAAACTGTAACCTATTAGTGTGGGATTAC-GTGGTTTCGCTA 1414 |||||||||| ||||||||||||| || | ||||||||||| | | |||| |||| | Sbjct 1151 CAAGAATCCATAAGAAGAGAAACTGCAATGTTTTAGTGTGGGAGT-CTGTGGGTTCGATG 1209 Query 1415 TTCGATCTAG-TGATAAGAAGAATCCAAATGATGATTGGATGGATCAAGAATGTTAATAG 1473 |||||| | | | ||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1210 TTCGAT-TGGATAATAAGAAGAATCCAAATGATGTTTGGATGGATCAAGAATGTTAATAG 1268 Query 1474 ATCAATAAGAAGCGTGCTCCGGCAATGGTCTAAGAAGAATCCGATGATTCGTTGCACAGT 1533 |||| | ||||||||| | |||||||||||||||||||||||||| || ||| || || Sbjct 1269 ATCACTCAGAAGCGTGATGAGGCAATGGTCTAAGAAGAATCCGATGTTTTGTTATACGGT 1328 Query 1534 TTACCCGTTATATCTCGTGTTCTTCGCCGGTATTCCTGAAGTATTCAG-AGTCCTTTGGA 1592 |||||||||||| ||||||||||| || ||||||||| |||| ||| | |||| ||||| Sbjct 1329 TTACCCGTTATACCTCGTGTTCTTTGCAGGTATTCCTCAAGTTTTC-GCAGTCTTTTGGG 1387 Query 1593 AAT-ACATTGATCGAATCTTTAGTGTTACATCTTATCTAGACGGGATTAGGTTCATTTCG 1651 | | |||||||||||||| ||||||| |||||||||||||| |||||||||||| ||| Sbjct 1388 G-TCATATTGATCGAATCTTCAGTGTTAAATCTTATCTAGACGAGATTAGGTTCATATCG 1446 Query 1652 AGA-GAGCCTTTGACGAAGAATCAATGGGAGTTTATATTCAATGAGGTCAAGGATAAGTC 1710 | | |||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||| Sbjct 1447 A-ATGAGCCTTTGACGAAGAATCAATGGGAATTTATATTCAATGAGGTAAAGAATAAGTC 1505 Query 1711 GGGGTTTGCGGAAACGCCTGAAGTTGCAAAGAAAGTGTCTTGGGCGAGAGGAGAATGGGC 1770 ||||||||||| || || || |||||||| |||||| |||||||||||| |||| Sbjct 1506 CTACTTTGCGGAAACACCCGACCTTACAAAGAAATTGTCTTCGGCGAGAGGAGAGTGGGT 1565 Query 1771 TTTACGAGAT-TCGAAAT-TGATGGAA-GTTGATACG-TTGATGCGTTACATAGAGAAAG 1826 |||||||||| | || | || ||| || || | | |||||||||||| ||||||| | Sbjct 1566 TTTACGAGATAT-GAT-TCTGGCAGAAAGT-GAGA-GATTGATGCGTTACGTAGAGAATG 1621 Query 1827 TTGATTATGATCAAAGTCTTCTCCTTTGGCACATTGCTACTGAGCTCTGTTTTCAAAAAG 1886 || ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| Sbjct 1622 TTTCTTATGATCAAAGTCTTCTCCTTTGGCATATTGCTACTGAGCTCTGTTTTCAACAAG 1681 Query 1887 AAGAAGGTG-GGAAGATGGAGAAGCTGAGCAGAGA-AGGTTATGATGACCGAGAATTCAG 1944 ||||| || ||| ||||||||| || ||| |||| | ||| |||||||| ||||| || Sbjct 1682 AAGAAAATGAGGA-GATGGAGAATCTAAGCCGAGATAA-TTACGATGACCGTGAATTTAG 1739 Query 1945 CAAGATTATATCGGACTACATGATGTATTTGTTGATAATGCGACCGAAGCTAATGTCGGA 2004 |||||||| |||||| ||||||||||||||||||||||||||||| || | |||||| | Sbjct 1740 CAAGATTACATCGGATTACATGATGTATTTGTTGATAATGCGACCAAAATTGATGTCGCA 1799 Query 2005 AGTGGCGGGAATCGGGACTATACGGTTTAGAGATACTAAAGCTGAAGCTGAGAGGTTTTT 2064 |||||| |||||||| |||||| | || ||||| ||| ||||||||||||||||||||| Sbjct 1800 AGTGGCAGGAATCGGAACTATAAGATTCAGAGACACTTTAGCTGAAGCTGAGAGGTTTTT 1859 Query 2065 CAAAGGAAGGCAAATCAAGGACTTGAGAGATATGAAACGAGCGAGTGAGACGGTTCTATT 2124 |||||||| ||| |||||| || ||||||||||||||||||||||| ||| | || ||| Sbjct 1860 CAAAGGAAAGCATATCAAGAACCTGAGAGATATGAAACGAGCGAGTAAGATGATTTTATC 1919 Query 2125 GGTTAGTAACGAT-ATTGAGCCGATACT-TGTGAAGGGAGATCGAAGCAAGTCGGTTCTT 2182 ||||||||||||| || ||||| || | |||||||||| |||||||||||||||| ||| Sbjct 1920 GGTTAGTAACGATTAT-GAGCCAATG-TATGTGAAGGGAAATCGAAGCAAGTCGGTGCTT 1977 Query 2183 TTCGATGCGAGTATGTTGGCGAAAGAGCTTCAGA-ACTTGAAAGAGAGTAGTAAT-GAA- 2239 || ||||||||||||||||| ||||||||||||| | ||| |||| | || || | ||| Sbjct 1978 TTTGATGCGAGTATGTTGGCAAAAGAGCTTCAGAGA-TTGGAAGATAATAATAGTAGAAA 2036 Query 2240 -G-AT--GGGAAATGGAGAGTGTTGAGCAAAGTGTGGGTTGAGTTGCTATGTTACGCAGC 2295 | || ||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct 2037 CGGATATGGGAAATGGAGAGTGTTAAGTAAAGTGTGGGTTGAGTTGCTATGTTACGCAGC 2096 Query 2296 AAGTCATTGTAAAGCGACGGAGCATGTGGCGCAACTTAGCAGAGGTGGTGAGCTTCTTAA 2355 |||||| |||||||| | |||||||||||||||||||||||||||||| |||||||||| Sbjct 2097 AAGTCAGTGTAAAGCTATGGAGCATGTGGCGCAACTTAGCAGAGGTGGGGAGCTTCTTAG 2156 Query 2356 CTTTGTTTGGTTGTTGATGGCTCACTTCGGATTAGGAGATCAGTTTCAGATCAATAAAGG 2415 ||||||||||||||||||||||||||| || ||| |||||||||| ||||| ||||||| Sbjct 2157 CTTTGTTTGGTTGTTGATGGCTCACTTTGGTTTATCAGATCAGTTTGAGATCGATAAAGG 2216 Query 2416 TGATGCTAGAGCTAAACTCGTTGTAGGAGAG 2446 || || |||||| |||||||| ||||||| Sbjct 2217 AGAACCTCGAGCTATACTCGTTGCAGGAGAG 2247 Score = 667 bits (361), Expect = 0.0 Identities = 444/485 (92%), Gaps = 2/485 (0%) Strand=Plus/Plus Query 56 ATGCAAGTGATTCCACCAGCAATAAAAAAGATATTAGACAAATGGAACATCAGAGGACTT 115 |||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||| Sbjct 1 ATGCAAGTGATTCCACCAAAAATAAAAAAGATCTTAGACATATGGAACATCAGAGGACTT 60 Query 116 GTGATAATGTCTCTGTTGTTCCAAACGTCTCTTATCTTCCTTGCACCAATGCGGAAACGC 175 |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 61 GTGATATTGTCTCTGTTGTTCCAAACGTCTCTTATCTTCCTTGCACCGCTGCGGAAACGT 120 Query 176 ACATCAAAGAAGTTGCTCGCCGCGGTTCTATGGACAGCATATCTTTTAGCGGATTGGACC 235 ||||||||||||| |||||| | |||||| ||||| |||||||||||||||||||||||| Sbjct 121 ACATCAAAGAAGTGGCTCGCTGTGGTTCTTTGGACCGCATATCTTTTAGCGGATTGGACC 180 Query 236 GCTAATTATGCGGTGTCTCAGATCACTAAGAACCAAGGAAAAGAAACAGAACCTGGCGA- 294 ||||||||||||||||| ||||| |||||||| ||||| ||||| ||||||||||||| Sbjct 181 GCTAATTATGCGGTGTCACAGATTACTAAGAATCAAGGGAAAGAGCCAGAACCTGGCGAG 240 Query 295 TCCTCCAAAAAACAAGAAGCTTCTTGCTCTATGGGCACCATTCTTGTTGTTGCATCTTGG 354 | |||||||||||||||| | |||||| | |||||||| ||||||||| |||||||||| Sbjct 241 T-TTCCAAAAAACAAGAAGGTACTTGCTATGTGGGCACCGTTCTTGTTGCTGCATCTTGG 299 Query 355 TGGGCCGGACACGATAACCGCGTTGGCTCTTGAGGATAATGCGTTATGGCAACGTCATTT 414 |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct 300 TGGGCCGGACACGATAACCGCGTTGGCTCTTGAGGATAATGCATTATGGAAACGTCATTT 359 Query 415 GTTTGGCCTCGTCTCTCAAGCTCTTGCAGGTGTTTATGCGGTGGTGCAATCGCTAGAAAA 474 |||| |||||||||||||||| || ||| ||||||||||||||||||||||| | ||||| Sbjct 360 GTTTAGCCTCGTCTCTCAAGCGCTCGCATGTGTTTATGCGGTGGTGCAATCGATGGAAAA 419 Query 475 CGTATTATGGCCACCAATTACACTTTTATTCATCACAGGAACGATTAAGTACGTGGAGAG 534 |||||||||||||||||| ||||| ||||||||||| ||||||||||| ||||||||||| Sbjct 420 CGTATTATGGCCACCAATCACACTGTTATTCATCACCGGAACGATTAAATACGTGGAGAG 479 Query 535 GACAC 539 | ||| Sbjct 480 GTCAC 484 > Ahg915804 jgi|Araly1|915804|Al_scaffold_0008_555 Length=1467 Score = 1310 bits (709), Expect = 0.0 Identities = 885/972 (91%), Gaps = 4/972 (0%) Strand=Plus/Plus Query 1474 ATCAATAAGAAGCGTGCTCCGGCAATGGTCTAAGAAGAATCCGATGATTCGTTGCACAGT 1533 |||||||||||||||||| ||||||||||||| || |||| |||| |||||| |||||| Sbjct 492 ATCAATAAGAAGCGTGCTTAGGCAATGGTCTAAAAAAAATCTGATGTTTCGTTACACAGT 551 Query 1534 TTACCCGTTATATCTCGTGTTCTTCGCCGGTATTCCTGAAGTATTCAGAGTCCTTTGGAA 1593 |||||||||||| || || ||||| || |||||||||||| | ||||||||||||||||| Sbjct 552 TTACCCGTTATACCTTGTATTCTTTGCGGGTATTCCTGAATTTTTCAGAGTCCTTTGGAA 611 Query 1594 ATACATTGATCGAATCTTTAGTGTTACATCTTATCTAGACGGGATTAGGTTCATTTCGAG 1653 |||||||||||||||||||||||||| | |||||||||||| | |||||||| ||| ||| Sbjct 612 ATACATTGATCGAATCTTTAGTGTTAAAACTTATCTAGACGAGTTTAGGTTCGTTTTGAG 671 Query 1654 AGAGCCTTTGACGAAGAATCAATGGGAGTTTATATTCAATGAGGTCAAGGATAAGTCGGG 1713 ||||||||||||||||||||||||||| ||||||||| ||||| | ||||||||||| | Sbjct 672 AGAGCCTTTGACGAAGAATCAATGGGAATTTATATTCTATGAGTTGAAGGATAAGTCCCG 731 Query 1714 GTTTGCGGAAACGCCTGAAGTTGCAAAGAAAGTGTCTTGGGCGAGAGGAGAATGGGCTTT 1773 ||||||||||| ||| |||||||||||||| ||||||||||||||||| |||||||||| Sbjct 732 TTTTGCGGAAACACCTAAAGTTGCAAAGAAACTGTCTTGGGCGAGAGGACAATGGGCTTT 791 Query 1774 ACGAGATTCGAAATTG-ATGGAAGTTGATACGTTGATGCGTTACATAGAGAAAGTTGATT 1832 ||||||||||| |||| | |||| ||||||| |||||| |||| |||||||||||||||| Sbjct 792 ACGAGATTCGATATTGGA-GGAAATTGATACATTGATGTGTTATATAGAGAAAGTTGATT 850 Query 1833 ATGATCAAAGTCTTCTCCTTTGGCACATTGCTACTGAGCTCTGTTTTCAAAAAGAAGAAG 1892 ||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct 851 ATGATCAAAGTCTACTCCTTTGGCATATTGCTACTGAGCTCTGTTTTCAAGAAGAAGAAG 910 Query 1893 GTGGGAAGATGGAGAAGCTGAGCAGAGAAGGTTATGATGACCGAGAATTCAGCAAGATTA 1952 ||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct 911 GTGGGGAGATGGAGAATTTGAGCAGAGAAAGTTATGATGACCGAGAATTCAGCAAGATTA 970 Query 1953 TATCGGACTACATGATGTATTTGTTGATAATGCGACCGAAGCTAATGTCGGAAGTGGCGG 2012 ||||||| ||||||||||||||||||||||||||||| || | ||||| |||||| ||| Sbjct 971 TATCGGATTACATGATGTATTTGTTGATAATGCGACCAAAATTGATGTCAGAAGTGTCGG 1030 Query 2013 GAATCGGGACTATACGGTTTAGAGATACTAAAGCTGAAGCTGAGAGGTTTTTCAAAGGAA 2072 |||| ||||||||||| |||||| | ||||| |||||||||||||||||||||||||||| Sbjct 1031 GAATGGGGACTATACGTTTTAGATACACTAAGGCTGAAGCTGAGAGGTTTTTCAAAGGAA 1090 Query 2073 GGCAAATCAAGGA-CTTGAGAGATATGAAACGAGCGAGTGAGACGGTTCTATTGGTTAGT 2131 ||| |||||| | || |||||||||||||| ||||||| ||| |||| ||| ||||| | Sbjct 1091 AGCATATCAAGAATCT-GAGAGATATGAAACTAGCGAGTAAGATGGTTTTATCGGTTAAT 1149 Query 2132 AACGATATTGAGCCGATACTTGTGAAGGGAGATCGAAGCAAGTCGGTTCTTTTCGATGCG 2191 || ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct 1150 AATGATATTGAGCCGATACTTGTGAAGGGAAATCAAAGCAAGTCGGTTCTTTTCGATGCG 1209 Query 2192 AGTATGTTGGCGAAAGAGCTTCAGAACTTGAAAGAGAGTAGTAATGAAGATGGGAAATGG 2251 ||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct 1210 AGTATGTTGGCAAAAGAGCTTCGGAATTTGAAAGAGAGTAGTAATGAAGATGGGAAATGG 1269 Query 2252 AGAGTGTTGAGCAAAGTGTGGGTTGAGTTGCTATGTTACGCAGCAAGTCATTGTAAAGCG 2311 ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1270 AGAGTATTGAGCAAAGTGTGGGTTGAGTTGCTATGTTACGCTGCAAGTCATTGTAAAGCT 1329 Query 2312 ACGGAGCATGTGGCGCAACTTAGCAGAGGTGGTGAGCTTCTTAACTTTGTTTGGTTGTTG 2371 ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct 1330 ACGGAGCATGTGGCGCAACTTAGCAGAGGCGGTGAGCTTCTTAACTTCGTTTGGTTGTTG 1389 Query 2372 ATGGCTCACTTCGGATTAGGAGATCAGTTTCAGATCAATAAAGGTGATGCTAGAGCTAAA 2431 |||| ||||||||| |||| |||| ||||| |||||||| |||| ||||||||||||||| Sbjct 1390 ATGGTTCACTTCGGTTTAGCAGATAAGTTTGAGATCAATGAAGGAGATGCTAGAGCTAAA 1449 Query 2432 CTCGTTGTAGGA 2443 ||| |||||||| Sbjct 1450 CTCCTTGTAGGA 1461 Score = 702 bits (380), Expect = 0.0 Identities = 455/492 (92%), Gaps = 2/492 (0%) Strand=Plus/Plus Query 56 ATGCAAGTGATTCCACCAGCAATAAAAAAGATATTAGACAAATGGAACATCAGAGGACTT 115 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1 ATGCAAGTGATTCCACCAGCAATAAAAAAGATATTAGACATATGGAACATCAGAGGACTT 60 Query 116 GTGATAATGTCTCTGTTG-TTCCAAACGTCTCTTATCTTCCTTGCACCAATGCGGAAACG 174 |||||| ||||||||||| || ||||||||||||||||| |||||||| ||||||||||| Sbjct 61 GTGATACTGTCTCTGTTGCTT-CAAACGTCTCTTATCTTTCTTGCACCTATGCGGAAACG 119 Query 175 CACATCAAAGAAGTTGCTCGCCGCGGTTCTATGGACAGCATATCTTTTAGCGGATTGGAC 234 ||| || |||||||||||||| ||||| ||||||| || |||||||||||||||||||| Sbjct 120 CACGTCGAAGAAGTTGCTCGCATCGGTTATATGGACCGCTTATCTTTTAGCGGATTGGAC 179 Query 235 CGCTAATTATGCGGTGTCTCAGATCACTAAGAACCAAGGAAAAGAAACAGAACCTGGCGA 294 |||||||||| ||| ||||||||||||||||||||||| ||||| ||||||||||||| Sbjct 180 AGCTAATTATGTGGTATCTCAGATCACTAAGAACCAAGGGAAAGACTCAGAACCTGGCGA 239 Query 295 TCCTCCAAAAAACAAGAAGCTTCTTGCTCTATGGGCACCATTCTTGTTGTTGCATCTTGG 354 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 240 TCTTCCAAAAAACAAGAAGCTTCTTGCTCTATGGGCACCATTCTTGTTGTTGCATCTTGG 299 Query 355 TGGGCCGGACACGATAACCGCGTTGGCTCTTGAGGATAATGCGTTATGGCAACGTCATTT 414 ||| |||||||| |||||||| ||||||||||||||||||||||||||| |||||||||| Sbjct 300 TGGTCCGGACACCATAACCGCATTGGCTCTTGAGGATAATGCGTTATGGAAACGTCATTT 359 Query 415 GTTTGGCCTCGTCTCTCAAGCTCTTGCAGGTGTTTATGCGGTGGTGCAATCGCTAGAAAA 474 ||||||||||||| |||||| |||||||||||||||| ||||||||||||| | ||||| Sbjct 360 ATTTGGCCTCGTCTTTCAAGCGCTTGCAGGTGTTTATGTGGTGGTGCAATCGTTGGAAAA 419 Query 475 CGTATTATGGCCACCAATTACACTTTTATTCATCACAGGAACGATTAAGTACGTGGAGAG 534 ||| |||||||||||||| |||||||||||| |||| ||||||||||| || || ||||| Sbjct 420 CGTCTTATGGCCACCAATCACACTTTTATTCGTCACCGGAACGATTAAATATGTAGAGAG 479 Query 535 GACACGAGCATT 546 |||||||||||| Sbjct 480 GACACGAGCATT 491 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 92406934370 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5