BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G45810.1
Length=1452
Score E
Sequences producing significant alignments: (Bits) Value
Ahg494401 jgi|Araly1|494401|fgenesh2_kg.8__217__AT5G45810.1 2316 0.0
Ahg946320 jgi|Araly1|946320|scaffold_702549.1 1098 0.0
Ahg934014 jgi|Araly1|934014|scaffold_402002.1 326 4e-88
> Ahg494401 jgi|Araly1|494401|fgenesh2_kg.8__217__AT5G45810.1
Length=1452
Score = 2316 bits (1254), Expect = 0.0
Identities = 1389/1455 (95%), Gaps = 6/1455 (0%)
Strand=Plus/Plus
Query 1 ATGGCGGATTTGTTAAGAAAAGTGAAATCGATAAAGAAGAAGCAGGATCAGAGCAATCAT 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCGGATTTGTTAAGAAAAGTGAAATCGATAAAGAAGAAGCAGGATCAGAGCAATCAA 60
Query 61 CAAGCTCTGATCCTTGGCAAATACGAAATGGGTAGGCTTCTTGGCCACGGAACCTTCGCT 120
||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||
Sbjct 61 CAAGCTCTGATCCTTGGCAAATATGAAATGGGTAGGCTTCTTGGCCATGGAACCTTTGCT 120
Query 121 AAAGTCTATCTCGCACGAAACGCTCAATCTGGAGAAAGCGTAGCGATCAAGGTAATTGAC 180
||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 121 AAAGTTTATCTCGCAAGAAACGCTCAATCTGGAGAAAGCGTAGCCATCAAGGTAATAGAC 180
Query 181 AAAGAGAAAGTTCTCAAATCCGGTTTAATCGCACACATCAAACGCGAGATCTCGATCTTG 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 181 AAAGAGAAAGTTCTCAAATCTGGTTTAATCGCACACATCAAACGCGAGATCTCGATCTTG 240
Query 241 CGCCGTGTTCGTCATCCTAACATCGTTCAGCTATTCGAAGTCATGGCGACGAAATCTAAG 300
|| |||||||||||||| ||||||||||||||||||||||||||||| ||||| || |||
Sbjct 241 CGTCGTGTTCGTCATCCAAACATCGTTCAGCTATTCGAAGTCATGGCTACGAAGTCCAAG 300
Query 301 ATCTATTTCGTAATGGAATATGTTAAAGGAGGTGAATTGTTCAACAAGGTAGCTAAAGGA 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 ATCTATTTCGTAATGGAATATGTTAAAGGAGGTGAATTGTTCAACAAGGTAGCTAAAGGA 360
Query 361 AGGTTAAAAGAAGAAATGGCACGTAAATATTTTCAACAGTTGATCTCAGCCGTATCGTTT 420
||||||||||||||||||||||||| |||||||||||| |||||||| ||||||| ||||
Sbjct 361 AGGTTAAAAGAAGAAATGGCACGTAGATATTTTCAACAATTGATCTCCGCCGTATGGTTT 420
Query 421 TGTCACTTCCGTGGTGTTTATCATCGAGATTTGAAACCGGAGAATCTTCTTTTAGACGAA 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 421 TGTCACTTCCGTGGTGTTTATCATCGAGATTTGAAACCGGAGAATCTTCTTTTAGACGAA 480
Query 481 AATGGAAACCTAAAAGTCTCTGATTTTGGTCTTAGTGCTGTTTCTGATCAGATTCGACAA 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 481 AATGGAAACCTAAAAGTCTCTGATTTTGGTCTTAGTGCTGTTTCTGATCAGATTCGACAA 540
Query 541 GATGGGTTATTTCATACTTTTTGTGGGACCCCTGCTTACGTGGCACCGGAGGTTCTTGCT 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 GATGGGTTATTTCATACTTTTTGTGGGACCCCTGCTTACGTGGCACCGGAGGTTCTTGCT 600
Query 601 CGGAAAGGCTACGATGGAGCTAAAGTCGATATTTGGTCTTGTGGAGTGATCTTGTTTGTG 660
|||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 601 CGGAAAGGCTACGACGGAGCTAAAGTTGATATTTGGTCTTGTGGAGTGATCTTGTTCGTG 660
Query 661 TTAATGGCAGGGTTTCTTCCTTTTCATGATCGGAATGTTATGGCTATGTATAAGAAGATT 720
|||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 661 TTAATGGCGGGGTTTCTACCTTTTCATGACCGGAATGTTATGGCTATGTATAAGAAGATT 720
Query 721 TACAGAGGAGATTTTAGGTGTCCGAGATGGTTTCCGGTTGAGATTAACCGGTTATTGATT 780
|| | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 721 TATAAAGGAGATTTTAGGTGTCCGAGATGGTTTCCGGTTGAGATTAACCGGTTGTTGATT 780
Query 781 CGAATGTTGGAGACTAAACCGGAGAGACGGTTTACAATGCCGGATATTATGGAGACTAGT 840
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct 781 CGAATGTTGGAGACTAAACCGGAAAGACGGTTTACAATGCCGGAGATTATGGAGACTAGT 840
Query 841 TGGTTCAAGAAAGGTTTTAAGCATATTAAGTTTTATGTTGAAGATGATCATCAGCTTTGT 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 841 TGGTTCAAGAAAGGTTTTAAGCATATTAAGTTTTATGTTGAAGATGATCATCAGCTTTGT 900
Query 901 AACGTTGCTGATGATGATGAGATCGAATCGATTGAATCGGTTTCGGGGAGGTCTTCTACG 960
|| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 901 AATGTTGTTGATGATGATGAGATCGAATCGATTGAATCGGTTTCGGGGAGGTCTTCTACG 960
Query 961 GTTTCTGAACCGGAAGACTTCGAGTCTTTTGATGGGAGGAGAAGAGGTGGTT-CGATGCC 1019
|||||||||||||| ||||| ||||||||||||||||||||||| || | || |||||||
Sbjct 961 GTTTCTGAACCGGATGACTTAGAGTCTTTTGATGGGAGGAGAAG-GGCGTTTTCGATGCC 1019
Query 1020 TAGACCGGCAAGTTTGAATGCTTTCGATCTCATTTCGTTTTCGCCAGGTTTTGATCTTTC 1079
|||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1020 TAGACCCGCGAGTTTGAATGCTTTCGATCTCATTTCGTTTTCGCCTGGTTTTGATCTTTC 1079
Query 1080 GGGTTTGTTTGAGGATGATGGTGAAGGATCTAGGTTTGTGTCTGGTGCTCCTGTTGGTCA 1139
||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||
Sbjct 1080 GGGTTTGTTTGAGGATGATCGTGAAGGCTCTAGGTTTGTGTCTGGTGCTCCTGTTGCTCA 1139
Query 1140 GATCATTTCTAAGTTGGAGGAAATCGCGAGGATTGTGAGTTTTACTGTGCGAAAGAAGGA 1199
|||||| ||||| |||||||||||||||| || ||||||||||| ||||||||||||||
Sbjct 1140 GATCATATCTAAATTGGAGGAAATCGCGAAAATCGTGAGTTTTACGGTGCGAAAGAAGGA 1199
Query 1200 TTGTAAAGTGAGTCTTGAAGGTTCAAGAGAAGGAAGTATGAAAGGTCCATTGTCAATTGC 1259
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1200 TTGTAAAGTGAGTCTTGAAGGTTCAAGAGAAGGAAGTAAGAAAGGTCCATTGTCAATTGC 1259
Query 1260 TGCTGAGATATTTGAACTGACACCAGCTTTGGTTGTTGTTGAAGTGAAGAAGAAAGGAGG 1319
|||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||
Sbjct 1260 TGCTGAGATATTTGAATTGACTCCAGCTTTGGTTGTTGTTGAAGTTAAGAAGAAAGGAGG 1319
Query 1320 TGATAAAATGGAGTATGATGAGTTTTGTAATAAGGAGTTGAAACCTAAGTTGCAGAATTT 1379
||||||||||||||||||||||||||||||||| || |||||||| || |||||||||||
Sbjct 1320 TGATAAAATGGAGTATGATGAGTTTTGTAATAAAGAATTGAAACCGAAATTGCAGAATTT 1379
Query 1380 GTCTTCCGAAAATGGCCAA-CGGGTTTCTGGTTCGCGTTCTTTGCCATCGTT-TTTACTT 1437
|||||| ||||| ||| || ||| ||||| ||||||||||||||||| | || |||||||
Sbjct 1380 GTCTTCGGAAAACGGCGAATCGG-TTTCTAGTTCGCGTTCTTTGCCAGC-TTATTTACTT 1437
Query 1438 TCTGATACTGATTAG 1452
|||||||||||||||
Sbjct 1438 TCTGATACTGATTAG 1452
> Ahg946320 jgi|Araly1|946320|scaffold_702549.1
Length=1663
Score = 1098 bits (594), Expect = 0.0
Identities = 1103/1342 (82%), Gaps = 62/1342 (5%)
Strand=Plus/Plus
Query 61 CAAGCTCTGATCCTTGGCAAATACGAAATGGGTAGGCTTCTTGGCCACGGAACCTTCGCT 120
|||||||| ||||| || | |||||||||||||| |||||| ||||| ||||| ||||||
Sbjct 75 CAAGCTCTAATCCTCGGGAGATACGAAATGGGTAAGCTTCTCGGCCATGGAACTTTCGCT 134
Query 121 AAAGTCTATCTCGCACGAAACGCT-CAATCTGGAGAAAGCGTAGCGATCAAGGTAATTGA 179
|| || ||||||||||| |||| | |||| |||||||||||||| ||||| ||||| ||
Sbjct 135 AAGGTTTATCTCGCACGTAACG-TGAAATCAGGAGAAAGCGTAGCAATCAAAGTAATCGA 193
Query 180 CAAAGAGAAAGTTCTCAAATCCGGTTTAATCGCACACATCAAACGCGAGATCTCGA-TCT 238
||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||
Sbjct 194 CAAAGAGAAAGTTCTCAAAGGAGGTTTAATCGCTCACATCAAACGCGAGATCTCGATTC- 252
Query 239 TGCGCCGTGTTCGTCATCCTAACATCGTTCAGCTATTCGAAGTCATGGCGACGAAATCTA 298
| || |||||||||||||| ||||| |||||||||||||||||||||||||||||| | |
Sbjct 253 TCCGACGTGTTCGTCATCCAAACATTGTTCAGCTATTCGAAGTCATGGCGACGAAAGCGA 312
Query 299 AGATCTATTTCGTAATGGAATATGTTAAAGGAGGTGAATTGTTCAACAAGGTAGCTAAAG 358
||||||||||||| |||||||||||| |||||||| |||||||| || ||||||||||
Sbjct 313 AGATCTATTTCGTGATGGAATATGTTCGTGGAGGTGAGTTGTTCAATAAAGTAGCTAAAG 372
Query 359 GAAGGT-TAAAAGAAGAAATGGCACGTAAATATTTTCAACAGTTGATCTCAGCCG-TATC 416
| || | ||||||||| | || || |||||||| || || |||||||| || | || |
Sbjct 373 G-TCGTCTTAAAGAAGAAGTAGCTCGGAAATATTTCCAGCAATTGATCTCTGCTGTTA-C 430
Query 417 GTTT-TGTCACTTC-CGTGGTGTTTATCATCGAGATTTGAAACCGGAGAATCTTCTT--T 472
||| |||||| | | |||||||||||| ||||| ||||||| ||||||||| || |
Sbjct 431 -TTTCTGTCAC-GCGAGAGGTGTTTATCATAGAGATCTGAAACCTGAGAATCTT-TTGCT 487
Query 473 TAGACGAAAATGGAAACCTAAAAGTCTCTGATTTTGGTCTTAGTGCTGTTTCTGATCAGA 532
| || || ||||| || || ||||||||||| ||||| ||||||||||| ||||||||||
Sbjct 488 T-GATGAGAATGGTAATCTTAAAGTCTCTGACTTTGGACTTAGTGCTGTCTCTGATCAGA 546
Query 533 TTCGACAAGATGGG-TTATTTCATACTTTTTGTGGGACCCCTGCTTACGTGGCACCGGAG 591
|||| ||||||||| || |||||||| |||||||| || |||||||| || || || |||
Sbjct 547 TTCGTCAAGATGGGCTT-TTTCATACGTTTTGTGGTACTCCTGCTTATGTTGCTCCTGAG 605
Query 592 GTTCTT-GCTCGGAAAGGCTACGATGGAGCTAAAGTCGATATTTGGTCTTGTGGAGTGAT 650
||| || || ||||||| || |||| |||||||| ||||||||||||||||| || ||
Sbjct 606 GTT-TTAGCGAGGAAAGGTTATGATGCTGCTAAAGTTGATATTTGGTCTTGTGGTGTTAT 664
Query 651 CTTGTTTGTGTTAATGGCAGGGTT-TCTT-CCTTTTCATGATCGGAATGTTATGGCTATG 708
|||||||||||| ||||| |||| | || ||||||||||||||||||||||||||||||
Sbjct 665 CTTGTTTGTGTTGATGGC-TGGTTAT-TTGCCTTTTCATGATCGGAATGTTATGGCTATG 722
Query 709 TATAAGAAGATTTACAGAGGAGATTTTAGGTGTCCGAGATGGTTTCCGGTTGAGATTAAC 768
|||||||||||||||||||| || ||||||||||| || |||||| | | |||| ||| |
Sbjct 723 TATAAGAAGATTTACAGAGGGGAGTTTAGGTGTCCTAGGTGGTTTTCTGCTGAGCTTA-C 781
Query 769 C-GGTTATTGATTCGAA--TGTTGGAGACTAAACCGGAGAGACGGTTTACAATGCCGGAT 825
|||| ||| | |||| | |||||||| || ||||||| ||||||||| | || ||
Sbjct 782 GAGGTTGTTG-T-CGAAGCTTTTGGAGACGAATCCGGAGAAACGGTTTACTTTCCCTGAG 839
Query 826 ATTATGGAGACTAGTTGGTTCAAGAAAGGTTTTAAGCATATTAAGTTTTATGTTGAAGAT 885
|||||||||| | |||||| |||||||| ||||||||||||||||||||||| || |||
Sbjct 840 ATTATGGAGAATTCTTGGTTTAAGAAAGGGTTTAAGCATATTAAGTTTTATGTGGAGGAT 899
Query 886 GATCATCAGCTT-TGTAACGTTGCTGATGATGATGAGATCGAA-TCGATTGAATCGGTTT 943
||| | || || ||||| |||| |||||||||||| || | | || | ||||||| |
Sbjct 900 GAT-A--AG-TTATGTAATGTTGTTGATGATGATGA-ATTGGAGTC--T-GAATCGGATA 951
Query 944 CGGGGAGGTCTTCTACGGTTTCTGAACCGGAAGACTTCGAGTCTTTTGATGGG-AGGAGA 1002
| | | || | ||||||||||| |||| || || |||| ||| || | || ||
Sbjct 952 -GAG-AT-TC--CG-CGGTTTCTGAATCGGA-GA-TT-GAGTATTTGGA-GCCTAGAAGG 1001
Query 1003 AGAGGTGGTTCGATGCCTAGACCGGCAAGTTTGAATGCTTTCGATCTCATTTCGTTTTCG 1062
|||| ||| | |||||||||| || |||||||||||||||||| |||| |||||||||
Sbjct 1002 AGAGTTGGGGGGTTGCCTAGACCTGCGAGTTTGAATGCTTTCGATATCATATCGTTTTCG 1061
Query 1063 CCAGGTTTTGATCTT-TCGGGTTTGTTTGAGGATGATGGTGAAGGATCTAGGTTTGTGTC 1121
| ||| |||||| || ||||| |||||||| || ||||| || || ||||||||||| ||
Sbjct 1062 CAAGGGTTTGAT-TTATCGGGGTTGTTTGATGACGATGGGGAGGGTTCTAGGTTTGTTTC 1120
Query 1122 TGGTGCTCCTGTTGGTC-A-GATCATTTCTAAGTTGGAGGAAATCGCGAG-GATTGTGAG 1178
|| ||||| ||| || | ||| || || |||||||| || || || | | |||||||
Sbjct 1121 GGGAGCTCCGGTT--TCGAAGATTATATCGAAGTTGGAAGAGATTGCTAAAG-TTGTGAG 1177
Query 1179 TTTTACTGTGCGAAAGAAGGATTGTAAAGTGAGTCTTGAAGGTTCAAGAGAAGGAAGTAT 1238
||||| ||| | ||||||||||||| || |||||||||||||||||| ||||| ||
Sbjct 1178 CTTTACGGTGAGGAAGAAGGATTGTAGGGTAAGTCTTGAAGGTTCAAGACAAGGA-GT-- 1234
Query 1239 GAAAGGTCCATTGTCAATTGCTGCTGAGATATTTGAACTGACACCAGCTTTGGTTGTTGT 1298
||||||||||||| | ||||| || |||||||| || |||||||| | |||||||||||
Sbjct 1235 GAAAGGTCCATTGACGATTGCAGCAGAGATATTCGAGTTGACACCATCGTTGGTTGTTGT 1294
Query 1299 TGAAGTGAAGAAGAAAGGAGGTGATAAAATGGAGTATGATGAGTTTTGTAATAAGGAGTT 1358
||||| |||||||||||||| ||||||| |||||||| ||||||||||| || || ||
Sbjct 1295 GGAAGTCAAGAAGAAAGGAGGAGATAAAACAGAGTATGAAGAGTTTTGTAACAACGAATT 1354
Query 1359 GAAACCTAAGTTGCAGAATTTG 1380
|||||| |||||||| ||||||
Sbjct 1355 GAAACCCAAGTTGCAAAATTTG 1376
> Ahg934014 jgi|Araly1|934014|scaffold_402002.1
Length=1558
Score = 326 bits (176), Expect = 4e-88
Identities = 946/1305 (72%), Gaps = 104/1305 (8%)
Strand=Plus/Plus
Query 97 CTTCTTGGCCACGGAACCTTCGCTAAAGTCTATCTCG-CACGAAACGCTCAA-TCTGGAG 154
||||| || ||||||| |||||||||||||||||| | || | ||| | || || || |
Sbjct 204 CTTCTCGGTCACGGAAGCTTCGCTAAAGTCTATCTAGCCAAG-AAC-ATTAATTCCGGCG 261
Query 155 AAAG-CGTAGCGATCAAGGTAATTGACAAAGAGAAAGTTC-TCAA-ATCCGGTTTAATCG 211
| | || || ||||| || |||||||| ||| ||| || | || | ||| | ||
Sbjct 262 -AGGATGTTGCCATCAAAGTCATTGACAAGGAG-AAGATCGTGAAGA-GCGGAATGGCCG 318
Query 212 CACACATCAAACGCGAGATCTCGATCTTGCGCCGTGTTCGTCATCCTAACATCGTTCAGC 271
|| || ||||| |||||||| ||| | || ||||| || || ||| |||| || || |
Sbjct 319 GTCATATAAAACGGGAGATCTCTATCCTCCGACGTGTCCGCCACCCTTACATTGTCCACC 378
Query 272 TATTCGAAGTCATGGCGACGAA-ATCTAAGATCTA-TTTCGTAATGGAATATGTTA-AAG 328
|| |||| || ||||| ||||| | | ||||| || || || ||||| || | || ||
Sbjct 379 TACTCGAGGTTATGGCTACGAAGA-CAAAGATTTACATT-GTGATGGAGTACG-TACGAG 435
Query 329 GAGGTGA-ATTGT-TCAACAAGGTAGCTAAAGGAAGG-TTAAAAGAAGAAATGGC-ACGT 384
| || || || | | || | ||| |||| ||| || || ||||| || || | |
Sbjct 436 GCGGAGAGCTT-TAT-AATACGGTGGCTAGAGGCCGGCTT-CGAGAAGGAACCGCGA-GG 491
Query 385 AAATATTTTCAACAGTTGATCTCAGCCGTATCG-TTT-TGTCACTTCCGTGGTGTTTATC 442
| |||||| || ||||||||||||||||| | | ||| || ||| ||| |||||||| |
Sbjct 492 AGATATTTCCAGCAGTTGATCTCAGCCGT-T-GCTTTCTGCCACAGCCGCGGTGTTTACC 549
Query 443 ATCGAGATTTGAAACCGGAGAATCTTCTTTTAGACGAAAAT-GGAAACCTAAAAGTCTCT 501
| || ||| | || | |||||||| ||||| |||| | || |||||| | |||||||||
Sbjct 550 ACCGCGATCTCAAGCTTGAGAATCTGCTTTTGGACG-ATATGGGAAACGTTAAAGTCTCT 608
Query 502 GATTTTGGTCTTAGTGCTGTTTCTGATCAGATTCGA-CAAGATGGGTTATTTCATACTTT 560
|| ||||| || || | ||| || || ||| || | ||||| || | | ||| || ||
Sbjct 609 GACTTTGGGCTCAGCGTTGTCTCGGAGCAG-CTCAAGCAAGACGGAATCTGTCAAACGTT 667
Query 561 TTGTGGGACCCCTGCTTA-CGTGGCACCGGAGGTTCTTG-CTCGGAAAGGCTACGATGGA 618
||| ||||| || ||||| | |||| || |||||| ||| | ||||||| || |||||
Sbjct 668 TTGCGGGACGCCGGCTTATC-TGGCGCCTGAGGTT-TTGACAAGGAAAGGGTATGATGGT 725
Query 619 GCTAAAGTCGATATTTGGTCTTGTGGAGTGATCTTGTTTGTGTTAATGGCAGGGTT-TCT 677
|| || | |||||||||||||||||||||||||||||||||||| ||||| || || |||
Sbjct 726 GCCAAGGCCGATATTTGGTCTTGTGGAGTGATCTTGTTTGTGTTGATGGCTGG-TTATCT 784
Query 678 TCCTTTTCATGATCG-GAATGTTAT-GGCTATGTATAAGAAGATTTACAGAGGAG-ATTT 734
||| ||| |||| | ||| | || || |||||| |||||||| || | ||| | | ||
Sbjct 785 TCCATTTGATGA-CAAGAACAT-ATTGGTTATGTACAAGAAGATATATAAAGG-GCAGTT 841
Query 735 TAGGTGTCCGAGATGGTTTCCGGTTGAGATT--AACCGG-TTATTGATTCGAATGTTGGA 791
|| ||||| | ||||||| | |||| | || || || | || || ||| | ||
Sbjct 842 TAAATGTCCTAAATGGTTTGCTCCTGAGCTCGCAA--GGCTTGT-GACCCGGATGCTAGA 898
Query 792 GACTAAACCGGAGAGACGGTTTACAATGCCGGATATTATGGAG-ACTAGTTGGTTCAAGA 850
|| || ||||| | || | ||||| ||||| || ||| || | ||| ||||||||||
Sbjct 899 CACGAATCCGGATACCCGAATCACAATACCGGAGATCATGAAGCA-TAGATGGTTCAAGA 957
Query 851 AAGGTTTTAAGCATATTAAGTTTTATGTTGAAGATGATCATCAGCTT-TGTAACGTTGCT 909
|||| || || ||| | || || ||| | ||| | ||| | || || |||| | | |
Sbjct 958 AAGGGTTCAAACATGTCAAATTCTATATCGAAAACGAT-A--AG-TTGTGTAGGGAGGAT 1013
Query 910 GATGA---TGATGA-GATCGAATCGATTGAATCGGT-T--TCGGGGAGGTCTTCTACGGT 962
||||| |||||| || ||| || || | || | | || || | || || || |
Sbjct 1014 GATGACAATGATGAAGA-CGATTC--TTCA-TCATTGTCATCAGGCCGATCATCGACTGC 1069
Query 963 TTCTGAACCGGAAGACT-TCGAGTCTTTTGATGGGAGGAGAAGAGGTGG-TTCGATGCCT 1020
||| ||| ||| || | | |||| || ||| | | ||| ||| | ||| |||||
Sbjct 1070 TTCAGAA--GGA-GA-TGTAGAGT-TT--GATATTA--A-AAG-GGTTGATTCAATGCCG 1118
Query 1021 AGACCGGCAAGTTTGAATGC-TTTCGATC-TCATTTCGTTTTCGCC-AGGTTTTGATCTT 1077
||||| || ||| | || || ||| || | |||| ||||| || | || ||| ||||||
Sbjct 1119 AGACCCGCCAGTCTAAACGCATTT-GA-CATCATATCGTTCTCTTCGAG-TTTGGATCTT 1175
Query 1078 TCGGGTTTGTTTGAGGATGATGGTGAAGGATCTAGGTTTGTGTCTGGTGCTCCTGTTGGT 1137
|||||||||||||| || | ||| ||||| | |||||||| |||| ||||||||| |
Sbjct 1176 TCGGGTTTGTTTGAAGAAGGTGGACAAGGAGCAAGGTTTGTATCTGCTGCTCCTGT-GAA 1234
Query 1138 CA-GATCATTTCTAAGTTGGAGGAAATCGCGAG-GATTGTGAGTTTTACTGTGCGAAAGA 1195
| |||||| || || |||| || || |||| || || | ||||| ||| | ||||
Sbjct 1235 AAAGATCATATCGAAACTGGAAGAGATTGCGAAAGAG-GTAAACTTTACAGTGAGGAAGA 1293
Query 1196 AGGATTGTAAAGTGAGTCTTGAAGGTTCAAGAGAAGGAAGTATGAAAGGTCCATTGTCAA 1255
||||||| | ||||| || ||||||| |||||||| | | ||||| || ||| |||
Sbjct 1294 AGGATTGGAGCGTGAGGCTAGAAGGTTGTAGAGAAGGT-GC-T-AAAGGACCGTTGACAA 1350
Query 1256 TT-GCTGCTGAGATATTTGAACTGACACCAGCT-TTGGTTGTTGTTGAAGTGAAGAAGAA 1313
|| | | |||||| ||||| ||||| ||| || ||| | || |||||||||||||||||
Sbjct 1351 TTAGA-GTTGAGATCTTTGAGCTGACGCCATCTCTTG-TGGTGGTTGAAGTGAAGAAGAA 1408
Query 1314 AGGAGGTGA-TA-A-AATGGAGTATGATGAGTTTTGTAATAAGGA 1355
|||||| || || | || | ||||||| |||||||| || |||||
Sbjct 1409 AGGAGG-GAATATAGAA-G-AGTATGAAGAGTTTTGCAACAAGGA 1450
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 54316689370
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5