BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G46540.1
Length=3747
Score E
Sequences producing significant alignments: (Bits) Value
Ahg494323 jgi|Araly1|494323|fgenesh2_kg.8__139__AT5G46540.1 5651 0.0
> Ahg494323 jgi|Araly1|494323|fgenesh2_kg.8__139__AT5G46540.1
Length=3765
Score = 5651 bits (3060), Expect = 0.0
Identities = 3543/3775 (94%), Gaps = 38/3775 (1%)
Strand=Plus/Plus
Query 1 ATGGCGGAGAAAGCGAAGAAGAAGAAAAATGGAGGAGGAGGAAATCAGAGAATAGCGTTT 60
|||||||||||||| |||||||||| || ||||| |||||||| ||||||||||||||||
Sbjct 1 ATGGCGGAGAAAGCAAAGAAGAAGACAACTGGAGAAGGAGGAACTCAGAGAATAGCGTTT 60
Query 61 TACAAGCTTTTCACGTTTGCAGATCGGTACGACATCGTTTTAATGGTCATCGGGACCCTC 120
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 61 TACAAGCTTTTCACGTTTGCAGATCGATACGACATCGTTTTAATGGTCATCGGGACACTC 120
Query 121 TCCGCCATGGCCAACGGCTTAACTCAGCCGTTTATGTCAATACTCATGGGGCAGCTCATT 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 121 TCCGCCATGGCCAACGGCTTAACTCAGCCGTTTATGGCAATACTCATGGGGCAGCTCATT 180
Query 181 AACGTTTTTGGTTTCTCTGATCATGATCACGTGTTTAAAGAAGTCTCCAAGGTTGCTGTG 240
|||||||| |||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct 181 AACGTTTTCGGTTTCTCAGATCATGATCACGTGTTTAAAGAAGTCTTCAAGGTTGCTGTG 240
Query 241 AAGTTTCTTTATCTTGCAGCCTACGCCGGTGTTGTGTCCTTCCTGCAGGTCTCATGCTGG 300
||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||
Sbjct 241 AAGTTTCTTTATCTTGCGGCCTACGCTGGTGTTATGTCCTTCCTGCAGGTCTCATGCTGG 300
Query 301 ATGGTAACTGGGGAGCGTCAATCCACTAGAATCCGCC-GTCTATACCTAAAAACAATTTT 359
|||||||||||||||||||||||||| |||||||||| || |||||||||||||||||||
Sbjct 301 ATGGTAACTGGGGAGCGTCAATCCACAAGAATCCGCCGGT-TATACCTAAAAACAATTTT 359
Query 360 AAGACAAGACATTGGATTTTTCGATACTGAGACAAATACCGGTGAAGTCATCGGAAGAAT 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 360 AAGACAAGACATTGGATTTTTCGATACTGAGACAAATACCGGTGAAGTCATCGGAAGAAT 419
Query 420 GTCAGGAGACACCATTCTTATTCAAGATTCCATGGGAGAAAAGGTTGGGAAATTCACACA 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 GTCAGGAGACACCATTCTTATTCAAGATTCCATGGGAGAAAAGGTTGGGAAATTCACACA 479
Query 480 GCTCGTTTCGTCATTCGTTGGTGGATTCACGGTTGCTTTTATAGTTGGAATGAAACTCAC 539
||||||||| ||||||||||||||||||||||||||||||||||| || | |||||||||
Sbjct 480 GCTCGTTTCATCATTCGTTGGTGGATTCACGGTTGCTTTTATAGTAGGCAGGAAACTCAC 539
Query 540 ATTGGCTCTTCTTCCGTGCGTTCCTCTGATCGTGGGCACAGGTGGAGCAATGACCTATAT 599
| ||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||
Sbjct 540 ACTGGCTCTTCTTCCGTGCATTCCTCTGCTCGTGGGCACGGGTGGAGCAATGACCTATAT 599
Query 600 CATGTCAAAAAAGGCTCAACGTGTTCAACTGGCTTACACAGAAGCTGGAAACGTAGTACA 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 600 CATGTCAAAAAAGGCTCAACGTGTTCAACTGGCTTACACAGAAGCTGGAAACGTAGTACA 659
Query 660 ACAAGCCGTTGGGTCAATTAGAACAGTTGTGGCTTTCACTGGGGAGAAACAATCAATGGG 719
||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||
Sbjct 660 ACAAGCCGTTGGGTCAATTAGAACAGTCGTGGCGTTCACTGGGGAGAAACAAGCAATGGA 719
Query 720 AAAATATGAGAAGAAGCTTGAGATAGCCTACAAATCTATGGTTAAACAAGGGCTATACTC 779
|||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||
Sbjct 720 AAAATATGAGAAGAAGCTTGAGATTGCTTACAGATCTATGGTTAAACAAGGGCTATACTC 779
Query 780 CGGTCTAGGCATTGGGATAATGATGGTTGTGGTATATTGTACTTATGGTTTTGCGATTTG 839
||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct 780 TGGTCTAGGCATTGGGATAATGCTGGTTGTGGTATATTGTACCTATGGTTTTGCGATTTG 839
Query 840 GTACGGTGCTAGGCAGATAATAGAGAAAGGATATACTGGAGGTCAAGTCATGAACGTGAT 899
|||||||||| ||| |||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 840 GTACGGTGCTCGGCTGATAATGGAGAAAGGATATACTGGAGGTCAAGTCATAAACGTGAT 899
Query 900 TACGTCAATCTTGACTGGAGGAATGGCGTTGGGGCAGACATTGCCTTCTCTTAACTCTTT 959
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 900 TATGTCAATCTTGACTGGAGGAATGGCGTTGGGGCAGACATTGCCTTCTCTTAACTCTTT 959
Query 960 TGCGGCCGGAACAGCTGCAGCTTACAAAATGTTTGAGACTATCAAAAGAAAACCAAAGAT 1019
|||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct 960 TGCGGCCGGAACAGCTGCAGCTTACAAAATGTTTGAGACTATCAAAAGAAGACCGAAGAT 1019
Query 1020 CGATGCTTATGACATGAGTGGTGAGGTTTTAGAAGAAATTAAAGGTGACATTGAGCTAAG 1079
|||||||||||||||||||||| ||||||| |||||||||||||| ||||| ||||||||
Sbjct 1020 CGATGCTTATGACATGAGTGGTAAGGTTTTGGAAGAAATTAAAGGCGACATCGAGCTAAG 1079
Query 1080 AGACGTGTACTTTCGATATCCGGCTAGACCTGACGTGCAGATATTTGTTGGATTTTCGTT 1139
||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct 1080 AGATGTGTACTTTCGATATCCGGCTAGACCTGACGTGCAGATCTTTGCTGGATTTTCGTT 1139
Query 1140 GACTGTACCGAATGGCATGACCGTGGCTTTGGTGGGACAGAGCGGTAGCGGAAAATCAAC 1199
|||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct 1140 GACTGTACCGAATGGCATGACCATGGCTTTGGTGGGACAGAGTGGTAGCGGAAAATCAAC 1199
Query 1200 TGTGATCAGTTTAATTGAGAGGTTCTACGATCCGGAATCAGGAGAAGTTTTAATAGATGG 1259
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1200 TGTGATCAGTTTAATTGAGAGGTTCTACGATCCGGAATCAGGAGAAGTTTTAATTGATGG 1259
Query 1260 AATTGACTTAAAGAAATTTCAAGTGAAATGGATCAGAAGTAAGATTGGTCTCGTAAGCCA 1319
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1260 GATTGACTTAAAGAAATTTCAAGTGAAATGGATCAGAAGTAAGATTGGTCTCGTAAGCCA 1319
Query 1320 AGAACCTATACTATTTGCTACCACAATTAGGGAGAACATTGTTTACGGCAAAAAAGATGC 1379
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1320 AGAACCTATACTTTTTGCGACCACAATTAGGGAGAACATTGTTTACGGCAAAAAAGATGC 1379
Query 1380 GTCCGACCAAGAAATTAGAACCGCACTTAAGCTCGCCAACGCTAGTAACTTCATCGACAA 1439
|||||| ||||||||||| ||||| ||| ||||||| ||||||||||| |||||||||||
Sbjct 1380 GTCCGATCAAGAAATTAGGACCGCGCTTCAGCTCGCTAACGCTAGTAAATTCATCGACAA 1439
Query 1440 ACTTCCGCAGGGTTTGGAAACGATGGTAGGAGAGCATGGGACGCAATTATCCGGTGGGCA 1499
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1440 ACTTCCGCAGGGTTTGGAAACGATGGTAGGAGAGCATGGGACACAATTATCCGGTGGGCA 1499
Query 1500 AAAGCAGAGGATTGCGATTGCGAGGGCGATTTTGAAAAACCCAAAAATATTGCTTCTTGA 1559
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1500 AAAGCAAAGGATAGCGATTGCGAGGGCGATTTTGAAAAACCCAAAAATATTGCTTCTTGA 1559
Query 1560 TGAAGCTACAAGCGCTTTGGACGCAGAATCTGAACGCATTGTTCAAGATGCTCTTGTAAA 1619
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1560 TGAAGCTACAAGCGCTTTGGATGCAGAATCTGAACGCATTGTTCAAGATGCTCTTGTAAA 1619
Query 1620 GCTAATGTTGAGCAGGACCACTGTAGTGGTGGCTCACCGACTTACCACCATTAGAACCGC 1679
||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1620 GCTAATGCTGAGCAGAACCACTGTAGTGGTGGCTCACCGACTTACCACAATTAGAACCGC 1679
Query 1680 TGATATGATCGCTGTTGTGCAGCAGGGAAAAGTCATTGAGAAAGGAACTCATGATGAGAT 1739
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1680 CGATATGATCGCTGTTGTGCAGCAGGGAAAAATCATTGAGAAAGGAACTCATGATGAGAT 1739
Query 1740 GATTAAAGATCCCGAAGGAACATATTCACAGCTAGTTCGTCTACAAGAAGGATCTAAGAA 1799
||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1740 GATTAAAGATCCCGAGGGAACATATTCACAGCTAGTTCGTCTACAGGAAGGATCTAAGAA 1799
Query 1800 AGAAGAAG-C-AA-TAGACAAGGAACCAGAAA--AG-TGTGAAA-TG--AGTTTGGA-AA 1849
|||||||| | || ||| || | |||| || | |||| || || | ||| ||
Sbjct 1800 AGAAGAAGCCGAACCAGA-AA--AGTGTGAAATGAGTTCCGAAATTGAAAGATCGGATAA 1856
Query 1850 TCGAAA---G-T---TCGGA-TAGC-CA--AAATGGAATCCATTCC-GGCACTCTCACAT 1897
| ||| | | | | | | | || || | | ||||||| | ||||||||||
Sbjct 1857 CCAAAATGGGATCCATAGAAGGAACTCATCAAGTAGCCGCCATTCCTTG-ACTCTCACAT 1915
Query 1898 CACCATCTGGTTTACCGGGAGTGATTAGCTTGGACCAGACGGAAGAGTTCCACGAGAATA 1957
|||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct 1916 CACCATTTGGTTTACCGGGAGTGATTAGCTTGAACCAGACGGAAGAGTTCCCCGAGAATA 1975
Query 1958 TATCTTCCACC-AAAACTCAAACGGTTAAGAAAGGCAAGGAAGTATCATTAAGAAGGCTT 2016
| |||||||| |||| |||||||| |||||| ||||| || |||||||||||||||||
Sbjct 1976 TCCCTTCCACCGAAAA-TCAAACGGCCAAGAAAAGCAAGAAATTATCATTAAGAAGGCTT 2034
Query 2017 GCTCACCTTAACAAACCGGAGATTTCGGTTTTGTTGCTCGGTTCATTGGCTGCAGTGATT 2076
||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct 2035 GCTCACCTTAACAAACCAGAGATTTCGGTTTTGTTGGTCGGTTCATTGGCTGCAGTGATT 2094
Query 2077 CACGGTATTGTG-TTCCCTGTTCAAGGTTTGCTTTTGTCTCGCACAATCAGGATATTCTT 2135
|||||||||||| || ||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct 2095 CACGGTATTGTGCTT-CCTGTCCAAGGTTTGCTTTTGTCTCACACAATCAGGATATTCTT 2153
Query 2136 TGAGCC-TTCAAATAAACTAAAGAATGATTCTC-TTTTCTGGGCTCTCATTTTTGTCGCC 2193
|||||| ||| ||| |||||||||||||||||| |||| |||||||||||||| ||| ||
Sbjct 2154 TGAGCCTTTC-AATCAACTAAAGAATGATTCTCATTTT-TGGGCTCTCATTTTCGTCTCC 2211
Query 2194 CTTGGCTTAACCGACCTGATTGTGATTCCGTTACAAAACTACTTATTCGCTATCGCTGGA 2253
||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct 2212 CTTGGCTTAACAAACCTGATTGTGATTCCGTTTCAAAACTACTTCTTCGCTATCGCTGGA 2271
Query 2254 GCAAAACTAATCAAACGTATCAGATCGTTGTCGTTTGATAGAGTCTTGCACCAAGATATA 2313
| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct 2272 GGAAAACTAATCAAACGTATCAGATCGTTGTCGTTTGATAAAGTTTTGCACCAAGATATA 2331
Query 2314 AGTTGGTTCGACGATACTAAAAATTCTAGCGGTGTGATTGGAGCGAGGTTGTCCACGGAT 2373
||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||
Sbjct 2332 AGTTGGTTCGACGATACTACGAATTCTAGCGGAGCGATTGGAGCGAGGTTGTCCACGGAT 2391
Query 2374 GCTTCTACAGTGAAGAGTATAGTAGGAGATGTGTTAGGGTTGATCATGCAAAATATGGCG 2433
||||| || ||||||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct 2392 GCTTCCACTGTGAAGAGTATCGTAGGAGATGCGTTAGGGTTGATCATGCAAAATATGGCA 2451
Query 2434 ACTATAATTGGAGCATTTATTATAGCGTTTACGGCTAATTGGTTATTAGCTTTAATGGCC 2493
|||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct 2452 ACTATAATTGCAGCATTTATTATAGCGTTCACGGCTAATTGGTTATTAGCTCTAATGGCC 2511
Query 2494 CTTTTGGTGGCACCAGTAATGTTTTTTCAAGGATACTACCAGATCAAGTTTATAACGGGT 2553
||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct 2512 CTTCTGGTGGCACCAGTAATGTTCTTTCAAGCATACTACCAGATCAAGTTTATAACGGGT 2571
Query 2554 TTTGGAGCAAAAGCAAGAGGAAAATATGAAGAGGCTAGCCAGGTTGCGAGTGACGCGGTG 2613
||||| |||||||||| |||||| ||||||||||||||||||||||| | ||||||||||
Sbjct 2572 TTTGGCGCAAAAGCAAAAGGAAAGTATGAAGAGGCTAGCCAGGTTGCAAATGACGCGGTG 2631
Query 2614 AGCAGCATAAGAACAGTTGCATCGTTCTGCGCAGAGGATAAAGTGATGGATTTATACCAA 2673
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2632 AGCAGCATAAGAACAGTTGCATCATTCTGCGCAGAGGATAAAGTGATGGATTTATACCAA 2691
Query 2674 GAGAAATGTGACGAACCAAAGCAACAAGGCTTCAAATTAGGACTGGTGAGTGGTTTGTGC 2733
||||||||||| | ||||||||||||||| |||||||||||||| || ||||||||||||
Sbjct 2692 GAGAAATGTGATGTACCAAAGCAACAAGGTTTCAAATTAGGACTCGTAAGTGGTTTGTGC 2751
Query 2734 TATGGTGGCTCATACTTGGCTCTCTATGTCATCGAGTCCGTATGCTTTCTCGGCGGTTCC 2793
||||||||||||| ||||||||||||| | ||||||||| |||||||| |||||||||||
Sbjct 2752 TATGGTGGCTCATTCTTGGCTCTCTATTTAATCGAGTCCTTATGCTTTGTCGGCGGTTCC 2811
Query 2794 TGGTTGATTCAGAACAGGAGGGCAACGTTCGGAGAATTCTTTCAGGTTTTCTTCGCGTTA 2853
||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 2812 TGGTTGATTCAGACCAGGAGAGCAACGTTCGGAGAATTCTTTCAGGTTTTCTTTGCGTTA 2871
Query 2854 ACTTTGACAGCCGTAGGAGTGACTCAAACTAGTACTATGGCACCTGACATAAACAAAGCA 2913
|||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 2872 ACTTTGACAGCCATAGGAGTGACTCAATCTAGTGCTATGGCACCTGACATAAACAAAGCA 2931
Query 2914 AAAGACTCTGCTGCTTCGATATTCGATATCCTCGATAGTAAACCGAAAATCGATTCGAGT 2973
|||||||||||||||||||| || ||||| ||||||| |||| |||||||||| ||||||
Sbjct 2932 AAAGACTCTGCTGCTTCGATTTTTGATATTCTCGATACTAAATCGAAAATCGACTCGAGT 2991
Query 2974 TCCGAGAAAGGGACAATATTACCAATCGTCCACGGCGATATCGAGTTGCAACATGTTAGT 3033
|||||||| |||||| || |||||||||||||||| |||||||||||||||||||| |||
Sbjct 2992 TCCGAGAAGGGGACAGTACTACCAATCGTCCACGGGGATATCGAGTTGCAACATGTCAGT 3051
Query 3034 TTCCGGTATCCTATGCGACCGGATATACAGATTTTTAGTGACTTGTGCTTAACTATCTCA 3093
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3052 TTCCGGTACCCTATGCGACCGGATATACAGATTTTTAGTGACTTGTGCTTAACTATCTCA 3111
Query 3094 TCTGGACAGACCGTTGCATTGGTTGGAGAAAGCGGGAGCGGTAAATCGACGGTGATAAGC 3153
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 3112 TCTGGACAGACCGTTGCATTGGTTGGAGAGAGCGGGAGCGGTAAATCGACGGTCATAAGC 3171
Query 3154 TTACTAGAGAGATTCTACGATCCGGATTCAGGCAAGATTCTTTTAGATCAAGTTGAAATT 3213
||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||
Sbjct 3172 TTACTAGAGAGATTCTATGATCCAGATTCAGGCAAGATTCTTTTAGATGAAGTTGAAATT 3231
Query 3214 CAATCGTTAAAATTGAGTTGGTTAAGGGAACAAATGGGTTTGGTTAGTCAAGAACCGGTT 3273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3232 CAATCGTTAAAATTGAGTTGGTTAAGGGAACAAATGGGTTTGGTTAGTCAAGAACCGGTT 3291
Query 3274 CTGTTCAATGAGACAATAGGATCAAACATAGCATATGGTAAAA-TCGGAGGAGCCACAGA 3332
||||||||||||||||| |||||||||||| |||||| |||| | | ||||||||| ||
Sbjct 3292 TTGTTCAATGAGACAATAAGATCAAACATAGTATATGGCAAAACTAG-AGGAGCCACTGA 3350
Query 3333 GGAAGAGATTATAACCGCGGCAAAAGCGGCTAATGTGCATAACTTCATCAGCTCATTGCC 3392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3351 GGAAGAGATTATAACCGCGGCAAAAGCGGCTAATGTGCATAACTTCATCAGCTCATTGCC 3410
Query 3393 TCAAGGCTACGAAACGTCCGTTGGTGAACGTGGAGTACAATTATCCGGTGGTCAAAAACA 3452
|||||||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||
Sbjct 3411 TCAAGGCTACGAAACGTCGGTTGGTGAACGCGGCGTACAATTATCTGGTGGTCAAAAACA 3470
Query 3453 GAGGATCGCGATCGCTCGGGCTATTCTCAAGGATCCTAAAATTTTGTTGCTTGATGAAGC 3512
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3471 GAGGATCGCGATTGCTCGGGCTATTCTCAAGGATCCTAAAATTTTGTTGCTTGATGAAGC 3530
Query 3513 GACAAGCGCGTTGGATGCAGAGTCTGAGCGGGTGGTGCAAGATGCGCTTGATCAGGTGAT 3572
||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct 3531 GACAAGCGCGTTGGATGCAGAGTCTGAGCGGGTAGTGCAAGATGCGCTTGATCGGGTGAT 3590
Query 3573 GGTGAACAGGACCACGGTTGTGGTGGCTCACCTGCTCACTACCATTAAGGACGCTGATAT 3632
||||||| |||||||||||||||||||||||| ||||||||| ||||||||||| ||| |
Sbjct 3591 GGTGAACCGGACCACGGTTGTGGTGGCTCACCGGCTCACTACGATTAAGGACGCGGATGT 3650
Query 3633 GATCGCGGTTGTGAAGAACGGTGTGATCGCGGAGAGTGGGAGACATGAAACGTTAATGGA 3692
|||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||
Sbjct 3651 GATCGCGGTTGTGAAGAACGGTGTGATCGCAGAGAGTGGAAGACATGAGACGTTAATGGA 3710
Query 3693 GATTTCAGGTGGTGCTTATGCATCGCTTGTAGCTTTTAATATGAGTGCAAACTGA 3747
|||||||||||||||||||||||| |||||||||||| | |||||||| ||||||
Sbjct 3711 GATTTCAGGTGGTGCTTATGCATCACTTGTAGCTTTTCACATGAGTGCGAACTGA 3765
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 141574171560
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5