BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G47340.1
Length=954
Score E
Sequences producing significant alignments: (Bits) Value
Ahg915309 jgi|Araly1|915309|Al_scaffold_0008_60 1424 0.0
Ahg494249 jgi|Araly1|494249|fgenesh2_kg.8__65__AT5G47330.1 1092 0.0
Ahg356260 jgi|Araly1|356260|fgenesh1_pg.C_scaffold_8000047 915 0.0
Ahg330701 jgi|Araly1|330701|fgenesh1_pm.C_scaffold_8000044 872 0.0
Ahg915342 jgi|Araly1|915342|Al_scaffold_0008_93 680 0.0
Ahg948213 jgi|Araly1|948213|scaffold_800100.1 368 4e-101
> Ahg915309 jgi|Araly1|915309|Al_scaffold_0008_60
Length=954
Score = 1424 bits (771), Expect = 0.0
Identities = 897/958 (94%), Gaps = 8/958 (1%)
Strand=Plus/Plus
Query 1 ATGGAGAAAGGTTTGAAGCGATCTTGTGTTATGGTGGTGGTTGCATTCTTAGCCAAGGTT 60
|||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||
Sbjct 1 ATGGAGAAAGGTTTGAAGCGGTCTGGTGTTATGGTGGTGGTTGCATTCTTAGCCATGGTT 60
Query 61 GATATCTCAGTTTCAGTTCCGTTCATAATGCTTCACGGAATCGCATCTCAATGTTCTGAT 120
|| |||| | ||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct 61 CATGTCTCTCTATCAGTTCCGTTCATAATGCTTCATGGAATCGCATCTCATTGTTCTGAT 120
Query 121 GATACAAATGCTAACTTCACACAGCTTCTCACTAACCTCTCTGGCTCTCCTGGCTTTTGC 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 GCTACAAATGCTAACTTCACACAGCTTCTCACTAACCTCTCTGGCTCTCCTGGCTTTTGC 180
Query 181 TTAGAAATTGGAAATGGAGTAATAAATTCAATGTTCTTGCCACTTACACAACAAGCAGAA 240
|||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||
Sbjct 181 GTAGAAATTGGAAATGGAGTAGTAACTTCATTGTTCTTGCCACTTACACAACAAGCAGAA 240
Query 241 ATAGCATGTGAGAATGTGAAGGAAATGAAAGAGTTGAGTCAAGGATACAACATTGTTGGA 300
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 241 ATAGCATGTGAGAATGTGAAGCAAATGAAAGAGTTGAGTCAAGGATACAACATTGTTGGA 300
Query 301 AGATCTCAGGGGAACCTAGTGGCTCGAGGCTTGATCGAGTTCTGCGACGGTGGACCTCCT 360
|||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct 301 AGATCTCAGGGGAACCTAGTGGCTAGAGGCTTGATCGAGTTCTGCGACGATGGACCTCCG 360
Query 361 GTTTTCAACTATATATCCTTAGCTGGTCCTCATGCTGGCATTTCTTCTCTTCCTAGGGGT 420
|||| ||||||||||||||||||||||||||||||||||||||||||| ||||| || |
Sbjct 361 GTTTACAACTATATATCCTTAGCTGGTCCTCATGCTGGCATTTCTTCTATTCCTCCGGCT 420
Query 421 CTTTGTGGTTT-AACGTCCGATCCAGCATGTAAGAAATTTAATGAGTTGATCAAGGGAGC 479
|||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 421 ATTTGTGGTTTGAA-GTCCGATCCAGCATGTAAGAAATTTGATGAGTTGATCAAGGGAGC 479
Query 480 TCTCTATAGCGAGACCATTCAAGATCATCTTGCTCCTAGTGGTTACTACAAAATCCCTAA 539
||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 480 TCTCTATAGCGAGTTCATTCAAGATCATCTTGCTCCTAGTGGTTATTACAAAATCCCTAA 539
Query 540 TGATATGAAA-CAGTACTTGGAAAGA-TCTAAGTATCTACCTAAGCTTAACAACGAGATA 597
|||||| ||| |||||||||||| | |||||||||||||||||||||||||| ||||||
Sbjct 540 TGATAT-AAATGAGTACTTGGAAA-ACTCTAAGTATCTACCTAAGCTTAACAATGAGATA 597
Query 598 CCAAACCAAAGAAACCAAACTTACAAAGACCGTTTCACCAGTTTACACAACCTGGTTCTT 657
||| |||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||
Sbjct 598 CCAGACCAAAGAAACCAAACTTACAAAGACCGTTTCACCATTTTACAGAACCTAGTTCTT 657
Query 658 GTCAAGTTTCAGGACGATGAGGTTATTACTCCAAATGATTCAACTTGGTTTGGGTTTTAT 717
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 658 GTCAAGTTTCAGGACGATGAGATTATTACTCCAAATGATTCAACTTGGTTTGGGTTTTAT 717
Query 718 CCGGATGGTGAGTTCGAAACTCTTCTCTCTGCTAACCAGACAAAGCTCTATACAGAGGAT 777
||||| ||||| |||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 718 CCGGAGGGTGAATTCGAACCTCTTCTCTCTCCTAACCAGACAAAGCTCTATACAGAGGAT 777
Query 778 TGGATCGGTCTGAAAACATTGGATGATGCTGGAAAAGTGAAGTTTGTGAGTGTACCCGGT 837
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 778 TGGATCGGTCTGAAAACATTGGATGATGCTGGAAAAGTGAAGTTTGTGAGTGTAGCCGGT 837
Query 838 GGACATGTCAGA-ATGGCAGAAGAAGATGTCGTCAAATACGTTGTACCTTATCTCCAGAA 896
||||| ||| | ||||| || |||||||||||||| | ||||||||||||||||||||
Sbjct 838 GGACACCTCA-ACATGGCGGATCAAGATGTCGTCAAACATGTTGTACCTTATCTCCAGAA 896
Query 897 CCAACAGCCTGCCGCACAAAGCTTCAACCGCAAGACCAAGGAGCCCTTGCATCCTTAA 954
||||| | || ||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct 897 CCAACCGTCTTCCGTACAAAGCTTCAACCGCAAGACCAAGGAGCCCTTGCATCCCTAA 954
> Ahg494249 jgi|Araly1|494249|fgenesh2_kg.8__65__AT5G47330.1
Length=1110
Score = 1092 bits (591), Expect = 0.0
Identities = 838/955 (88%), Gaps = 26/955 (3%)
Strand=Plus/Plus
Query 7 AAAGGTTTGAAGCGATCTTGTGTTATGGTGGTGGTTGCATTCTTAGCCAAGGTTGATATC 66
|||||||||||||| ||||||||| ||||| ||||||||| ||||||| |||| || ||
Sbjct 70 AAAGGTTTGAAGCGGTCTTGTGTTGCGGTGGCGGTTGCATTATTAGCCATGGTTCATGTC 129
Query 67 TCAGTTTCAGTTCCGTTCATAATGCTTCACGGAATCGCATCTCAATGTTCTGATGATACA 126
|| |||||||||||||||||||||||||| |||||| || ||||||||||| ||| || |
Sbjct 130 TCTGTTTCAGTTCCGTTCATAATGCTTCATGGAATCTCAGCTCAATGTTCTAATGCTAGA 189
Query 127 AATGCTAACTTCACACAGCTTCTCACTAACCTCTCTGGCTCTCCTGGCTTTTGCTTAGAA 186
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 190 GATGCTAACTTCACACAGCTTCTCACTAACCTCTCTGGCTCTCCTGGCTTTTGCTTAGAA 249
Query 187 ATTGGAAATGGAGTAATAAATTCAAT-GTTCTTGCCACTTACACAACAAGCAGAAATAGC 245
||||||||||||||| |||| || ||| |||||||||| | ||||| ||||||||
Sbjct 250 ATTGGAAATGGAGTAGGCGATTC-ATGGTTAATGCCACTTACGCGGCAAGCGGAAATAGC 308
Query 246 ATGTGAGAATGTGAAGGAAATGAAAGAGTTGAGTCAAGGATACAACATTGTTGGAAGATC 305
|||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 309 GTGTGAGAAGGTGAAGCAAATGAAAGAGTTGAGTCAAGGATACAACATTGTTGGAAGATC 368
Query 306 TCAGGGGAACCTAGTGGCTCGAGGCTTGATCGAGTTCTGCGACGGTGGACCTCCTGTTTT 365
||||||||||||||||||||||||||| || ||||||||||||||||| ||||| ||||
Sbjct 369 TCAGGGGAACCTAGTGGCTCGAGGCTTAATTGAGTTCTGCGACGGTGGCCCTCCGGTTTA 428
Query 366 CAACTATATATCCTTAGCTGGTCCTCATGCTGGCATTTCTTCTCTTCCTAGGGGTCTTTG 425
|||||| |||||||| ||||||||||||||||| || || ||| |||||| | || ||
Sbjct 429 CAACTACATATCCTTGGCTGGTCCTCATGCTGGAATATCCTCTGTTCCTATGTGTGGTTC 488
Query 426 TGGTTTAACGTCCGATCCAGCATGTAAGAAATTTAATGAGTTGATCAAGGGAGCTCTCTA 485
|||||| | || | | | | || || | ||||| | |||||||||| | ||||
Sbjct 489 TGGTTT-A-TTCTG-T--A--A-GTTAG-CA---GATGAGCTAATCAAGGGAGATATCTA 536
Query 486 TAGCGAGACCATTCAAGATCATCTTGCTCCTAGTGGTTA-CTACAAAATCCCTAATGATA 544
|||||| |||||||||||||||||||||||||||||| || |||||| |||| |||||
Sbjct 537 TAGCGACTTCATTCAAGATCATCTTGCTCCTAGTGGTTATCT-CAAAATTCCTACTGATA 595
Query 545 TGAAACAGTACTTGGAAAGA-TCTAAGTATCTACCTAAGCTTAACAACGAGATACCAAAC 603
||||| |||||||||||| | |||||||||||||||||||||||||| |||||||||||
Sbjct 596 TGAAAAAGTACTTGGAAA-ACTCTAAGTATCTACCTAAGCTTAACAATGAGATACCAAAT 654
Query 604 CAAAGAAAC-CAAACTTACAAAGACCGTTTCACCAGTTTACACAACCTGGTTCTTGTCAA 662
||||||||| | |||||||||||||||||||||||||||||| ||| |||||||| ||||
Sbjct 655 CAAAGAAACTC-AACTTACAAAGACCGTTTCACCAGTTTACATAACTTGGTTCTTATCAA 713
Query 663 GTTTCAGGACGATGAGGTTATTACTCCAAATGATTCAACTTGGTTTGGGTTTTATCCGGA 722
||||||||||||| |||||||| |||||| |||||| | ||||| ||||||||||||||
Sbjct 714 GTTTCAGGACGATAAGGTTATTGTTCCAAAAGATTCATCGTGGTTCGGGTTTTATCCGGA 773
Query 723 TGGTGAGTTCGAAAC-TCTTCTCTCTGCT-AACCAGACAAAGCTCTATACAGAGGATTGG 780
|||||| || | ||| ||||||||||||| || |||||||||||||||||||||||||||
Sbjct 774 TGGTGAATTTG-AACATCTTCTCTCTGCTCAA-CAGACAAAGCTCTATACAGAGGATTGG 831
Query 781 ATCGGTCTGAAAACATTGGATGATGCTGGAAAAGTGAAGTTTGTGAGTGTACCCGGTGGA 840
|| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct 832 ATAGGTCTGAAAACATTGGATGATGCTGGAAAAGTGAAGTTTGTGAGTGTAGCCGGTGAA 891
Query 841 CATGTCAGAATGGCAGAAGAAGATGTCGTCAAATACGTTGTACCTTATCTCCAGAACCAA 900
||| ||||||||||||| ||||||||||||||| | |||||||||||||||||| |||||
Sbjct 892 CATATCAGAATGGCAGATGAAGATGTCGTCAAACATGTTGTACCTTATCTCCAGGACCAA 951
Query 901 CAGCCTGCCGCACAAAG-CTTCAACCGCAAGACCAAGGAGCCCTTGCATCCTTAA 954
| | || | | ||||| || |||||||||||| ||| |||||||| ||||||||
Sbjct 952 CCGTCTTCGGTGCAAAGACT-CAACCGCAAGACGAAGCAGCCCTTGAATCCTTAA 1005
> Ahg356260 jgi|Araly1|356260|fgenesh1_pg.C_scaffold_8000047
Length=942
Score = 915 bits (495), Expect = 0.0
Identities = 816/967 (84%), Gaps = 38/967 (4%)
Strand=Plus/Plus
Query 1 ATGGAGAAAGGTTTGAAGCGATCTTGTGTTATGGTGGTGGTTGCATTCTTAGCCAAGGTT 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||
Sbjct 1 ATGGAGAAAGGTTTGAAGCGGTCTTGTGTTATGGTGGTGGTTGCATTCTTAGCTATGGTT 60
Query 61 GATATCTCAGTTTCAGTTCCGTTCATAATGCTTCACGGAATCGCATCTCAATGTTCTGAT 120
|| |||| ||||||||||||||||||| ||||| | ||||| | ||||||||||||||
Sbjct 61 CATGTCTCTCTTTCAGTTCCGTTCATAATACTTCATGAAATCGGAACTCAATGTTCTGAT 120
Query 121 GATACAAATGCTAACTTCACACAGCTTCTCACTAACCTCTCTGGCTCTCCTGGCTTTTGC 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 GCTACAAATGCTAACTTCACACAGCTTCTCACTAACCTCTCTGGCTCTCCTGGCTTTTGC 180
Query 181 TTAGAAATTGGAAATGGAGTAATAAATTCAATG-TTCTTGCCACTTACACAACAAGCAGA 239
||||||||||| |||||| ||| ||||| || || |||||||||| | ||||| ||
Sbjct 181 TTAGAAATTGGCAATGGAATAAGCGATTCA-TGGTTAATGCCACTTACGCGGCAAGCGGA 239
Query 240 AATAGCATGTGAGAATGTGAAGGAAATGAAAGAGTTGAGTCAAGGATACAACATTGTTGG 299
|||||| ||||| ||||||||| ||||| |||||||||||| ||||||||||||||||||
Sbjct 240 AATAGCGTGTGATAATGTGAAGCAAATGGAAGAGTTGAGTCTAGGATACAACATTGTTGG 299
Query 300 AAGATCTCAGGGGAACCTAGTGGCTCGAGGCTTGATCGAGTTCTGCGACGGTGGACCTCC 359
|||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct 300 AAGAGCTCAGGGGAACTTAGTGGCTCGAGGCTTGATCGAGTTCTGCGACGGTGGGCCTCC 359
Query 360 TGTTTTCAACTATATATCCTTAGCTGGTCCTCATGCTGGCATTTCTTCTCTTCCTAGGGG 419
||||| ||||||||||||||| |||||||||||||||||||| | || ||||| | |
Sbjct 360 TGTTTACAACTATATATCCTTGGCTGGTCCTCATGCTGGCATCGCCGCTTTTCCTCCGTG 419
Query 420 TCTTTGTGGTTTAACGTCCGATCCAGCATGTAAGAAATTTAATGAGTTGATCAAGGGAGC 479
| || |||| | | | | | ||| || |||| | || || ||||| ||||
Sbjct 420 TAATTCTGGTGGCATTT--G-TA-A-CAT--AACAAATG-A--GA-TT-ATCAATGGAGA 467
Query 480 TCTCTATAGCGAGACCAT--TCAAGATCATCTTGCTCCTAGTGGTTACTACAAAATCCCT 537
| |||||||||| | | ||||||| ||||||||||||||||||| ||||||| ||||
Sbjct 468 TGTCTATAGCGA--CTTTGCTCAAGATAATCTTGCTCCTAGTGGTTATTACAAAAACCCT 525
Query 538 AATGATATGAAACAGTACTTGGAAAGATC-TAAGTATCTACCTAAGCTTAACAACGAGAT 596
|| || ||| | ||||| || |||| | |||||||||||||||||||||||| ||||
Sbjct 526 CATAATGTGACAGAGTACCTG-AAAGGTTGTAAGTATCTACCTAAGCTTAACAATGAGAG 584
Query 597 ACCAAACCAAAGAAACCAAACTTACAAAGACCGTTTCACCAGTTTACACAACCTGGTTCT 656
||| ||||||||||||||||||||||||||||||||||||||||||| || |||||| |
Sbjct 585 ACCGGACCAAAGAAACCAAACTTACAAAGACCGTTTCACCAGTTTACAGAAGCTGGTTTT 644
Query 657 TGTCAAGTTTCAGGACGATGA-GGTTATTACTCC-AAATGATTCAACTTGGTTTGGGTTT 714
|||| ||||||| ||||| | ||||||| ||| ||| || ||| ||||||| ||||||
Sbjct 645 TGTCCTGTTTCAGAACGAT-ACGGTTATTG-TCCCAAAAGAGTCATCTTGGTTCGGGTTT 702
Query 715 TATCCGGATGGTGAGTTCGAA-AC-TCTTCTCTCTGCTAACC-AGACAAAGCTCTATACA 771
||||| |||||||| || || || | ||||| ||| | || ||||||||||||||| |
Sbjct 703 TATCCAGATGGTGACTT--AACACATGTTCTCCCTG-TGTCCCAGACAAAGCTCTATATA 759
Query 772 GAGGATTGGATCGGTCTGAAAACATTGGAT-GATGCTGGAAAAGTGAAGTTTGTGAGTGT 830
||||||||||| ||||||||| |||||| | | ||||||||||||| ||||||||| |||
Sbjct 760 GAGGATTGGATAGGTCTGAAAGCATTGGCTCG-TGCTGGAAAAGTGCAGTTTGTGATTGT 818
Query 831 ACCCGGTGGACA-TGTCAGAATGGCAGAAGAAGATGTCGTCAAATACGTTGTACCT-TAT 888
|||| ||| || | | | ||| || || |||||| ||||||| ||||| |||||| | |
Sbjct 819 ACCCAGTGCCCACT-TAATAATTGCGGATGAAGATCTCGTCAACTACGTCGTACCTCT-T 876
Query 889 CTCCAGAACCAACAGCCTGCCGCACAAAG-CTTCAACCGCAAGACCAAGGAGCCCTTGCA 947
||| || ||||| | ||||||||| ||| || |||||||||||||||||||||||||||
Sbjct 877 CTCGAGGACCAAGTGTCTGCCGCACCAAGACT-CAACCGCAAGACCAAGGAGCCCTTGCA 935
Query 948 TCCTTAA 954
|||||||
Sbjct 936 TCCTTAA 942
> Ahg330701 jgi|Araly1|330701|fgenesh1_pm.C_scaffold_8000044
Length=951
Score = 872 bits (472), Expect = 0.0
Identities = 818/978 (84%), Gaps = 51/978 (5%)
Strand=Plus/Plus
Query 1 ATGGAGAAAGGTTTGAAGCGATCTTGTGTTATGGTGGTGGTTGCATTCTTAGCCAAGGTT 60
|||||||| ||||||||||| |||||||||||||||||||| ||||||||||||| | ||
Sbjct 1 ATGGAGAAGGGTTTGAAGCGGTCTTGTGTTATGGTGGTGGTCGCATTCTTAGCCATGTTT 60
Query 61 GATATCTCAGTTTCAGTTCCGTTCATAATGCTTCAC-GGAATCGCATCTCAATGTTCTGA 119
|| |||| ||||||||||||||| |||| |||| | | ||||| | |||||||||||||
Sbjct 61 CATGTCTCTGTTTCAGTTCCGTTCCTAATACTTC-CTGAAATCGGAACTCAATGTTCTGA 119
Query 120 TGATACAAATGCTAACTTCACACAGCTTCTCACTAACCTCTCTGGCTCTCCTGGCTTTTG 179
||||||| || |||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 120 TGATACAGTTGGTAACTTCACACAGCTTCTCACTAACCTCTCAGGCTCTCCTGGCTTTTG 179
Query 180 CTTAGAAATTGGAAATGG--A-GTAATA---AATTCAAT-GTTCTTGCCACTTACACAAC 232
||||| |||||| |||| | | |||| ||| || ||| | |||||||||||||
Sbjct 180 CTTAGTAATTGGCGATGGAAATGAAATAGCCGGTTC-ATGGTTAATACCACTTACACAAC 238
Query 233 AAGCAGAAATAGCATGTGAGAATGTGAAGGAAATGAAAGAGTTGAGTCAAGGATACAACA 292
|||| || ||||| |||||||| |||||| ||||| ||||||||||||| ||||||||||
Sbjct 239 AAGCGGAGATAGCGTGTGAGAAGGTGAAGCAAATGGAAGAGTTGAGTCATGGATACAACA 298
Query 293 TTGTTGGAAGATCTCAGGGGAACCTAGTGGCTCGAGGCTTGATCGAGTTCTGCGACGGTG 352
||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct 299 TTGTTGGAAGAGCTCAGGGGAACCTAGTGGCTCGAGGCTTAATCGAATTCTGCGACGGTG 358
Query 353 GACCTCCTGTTTTCAACTATATATCCTTAGCTGGTCCTCATGCTGGCAT-TTCTTCTCTT 411
| ||||| |||| ||||||||||||||| |||||||||||||||||||| | | ||||
Sbjct 359 GCCCTCCGGTTTACAACTATATATCCTTGGCTGGTCCTCATGCTGGCATCGCCGT-TCTT 417
Query 412 CCTAGGGGT-CT--TTGTGGTTTAACGTCCGATCCAGCATGTAAG-AAATTTAATGAGTT 467
||| || || || | || ||| || | | | ||| | || |||| || ||
Sbjct 418 CCTCGGTGTACTACATCTGATTT-AC-TTTG-T--GGCA--T-AGCAAATGGGAT-AG-- 466
Query 468 GATCAAGGGAGCTCTCTATAGCGAGACCATTCAAGATCA-TCTTGCTCCTAGTGGTTACT 526
| ||| |||| | |||||||||| |||||||| | |||||||||||||||||| |
Sbjct 467 G--CAATGGAGATGTCTATAGCGACTTTGTTCAAGAT-AGTCTTGCTCCTAGTGGTTATT 523
Query 527 ACAAA-ATCCCTAATGATATGAAACAGTACTTGGAAA-GATCTAAGTATCTACCTAAGCT 584
|||| | |||||| || ||| | ||||| | |||| | | ||||||||||||||||||
Sbjct 524 TCAAAGA-CCCTAAAAATGTGACAGAGTACCT-GAAAGGTTGTAAGTATCTACCTAAGCT 581
Query 585 TAACAACGAGATACCAAACCAAAGAAACCAAACTTACAAAGACCGTTTCACCAGTTTACA 644
|||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 582 TAACAATGAGAGACCAGACCAAAGAAACCAAACTTACAAAGACCGTTTCACCAGTTTACA 641
Query 645 CAACCTGGTTCTTGTCAAGTTTCAGGACGATGA-GGTTATTACTCCAAATGATTCAACTT 703
|||||||||||||||| ||||||| ||||| | ||||||| |||||| || ||| |||
Sbjct 642 CAACCTGGTTCTTGTCCTGTTTCAGAACGAT-ACGGTTATTGTTCCAAAAGAATCATCTT 700
Query 704 GGTTTGGGTTTTATCCGGATGGTGAGTTCGAA-AC-TCTTCTCTCTGCTA-ACCAGACAA 760
|||| |||||||||||||||||||| || || || | ||||||||| | || ||||||
Sbjct 701 GGTTCGGGTTTTATCCGGATGGTGACTT--AACACATGTTCTCTCTG-TGGACAAGACAA 757
Query 761 AGCTCTATACAGAGGATTGGATCGGTCTGAAAACATTGGATGATGCTGGAAAAGTGAAGT 820
||||||||| |||||||||||| ||||||||| |||||| || ||||||||||||| |||
Sbjct 758 AGCTCTATATAGAGGATTGGATAGGTCTGAAAGCATTGGTTGTTGCTGGAAAAGTGCAGT 817
Query 821 TTGTGAGTGTACCCGGTGGAC-A-TGTCAGAATGGCAGAAGAAGATGTCGTCAAATACGT 878
|||||| |||||||||| || | | | | ||| || || || ||| |||||||||||||
Sbjct 818 TTGTGAATGTACCCGGTA-ACCACT-TAATAATAGCTGATGAGGATCTCGTCAAATACGT 875
Query 879 TGTACCT-TATCTCCAGAACCAACAGCCTGCCGCACAAAG-CTTCAACCGCAAGACCAAG 936
|||||| | ||||||| |||| ||| ||||||||| ||| || ||||||||||||||||
Sbjct 876 CGTACCTCT-TCTCCAGGACCAGCAGTCTGCCGCACCAAGACT-CAACCGCAAGACCAAG 933
Query 937 GAGCCCTTGCATCCTTAA 954
||||||||||||| ||||
Sbjct 934 GAGCCCTTGCATCTTTAA 951
> Ahg915342 jgi|Araly1|915342|Al_scaffold_0008_93
Length=915
Score = 680 bits (368), Expect = 0.0
Identities = 703/860 (82%), Gaps = 42/860 (5%)
Strand=Plus/Plus
Query 65 TCTCAGTTTCAGTTCCGTTCATAATGCTTCACGGAATCGCATCT-CAATGTTCTGATGAT 123
||||||| || ||||||||| | |||||||||||||| | || | ||||| |||
Sbjct 68 TCTCAGTCTCGGTTCCGTTCGTCGTGCTTCACGGAATCACCGCTGC-GTGTTCCGATCCG 126
Query 124 ACAAATGCTAACTTCACACAGCTTCTCACT-AACCTCTCTGGCTCTCCTGGCTTTTGCTT 182
|| ||||| ||||||||||||||||||| | |||||||||||||||| || | |||||
Sbjct 127 ACGAATGCCAACTTCACACAGCTTCTCA-TGAACCTCTCTGGCTCTCAAGGGTCATGCTT 185
Query 183 AGAAATTGGAAATGGAGTAATAAATTCAATGTTCTTGCCACTTACACAACAAGCAGAAAT 242
|||||||||| ||||| | | ||||||| || ||||||||||||| ||||| || ||
Sbjct 186 AGAAATTGGAGATGGATTCTTCGCTTCAATGCTCATGCCACTTACACAGCAAGCTGAGAT 245
Query 243 AGCATGTGAGAATGTGAAGGAAATGAAAGAGTTGAGTCAAGGATACAACATTGTTGGAAG 302
||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 246 AGCGTGTGAGAAGGTGAAGCAAATGAAAGAGTTGAGTCAAGGATACAACATTGTTGGAAG 305
Query 303 ATCTCAG--GG----G---AACCTAGTGGCTCGAGGCTTGATCGAGTTCTGCGACGGTGG 353
||||||| || | |||||||||||||||||||||||||||||||||||||| ||
Sbjct 306 ATCTCAGATGGAACAGGGGAACCTAGTGGCTCGAGGCTTGATCGAGTTCTGCGACGGCGG 365
Query 354 ACCTCCTGTTTTCAACTATATATCCTTAGCTGGTCCTCATGCTGGCATTTCTTCTCTTCC 413
||||| || | |||||| ||||| |||| ||||||||||||||| || || ||| ||||
Sbjct 366 GCCTCCGGTGTACAACTACATATCTTTAGGTGGTCCTCATGCTGGGATATCCTCTGTTCC 425
Query 414 TAGGGGTCTTTGTGGTTTA-ACGTCCGATC-CAGCATGTAA-GAAATTTAATGAGTT-GA 469
|| | || ||| | | | ||| || | | |||| | | | ||| ||| | | |
Sbjct 426 TACGTGTG---GTGCAC-AGATGCCCGGTCTC-GTATGTGATGCA-TTTGATGCGCTAG- 478
Query 470 TCAAGGGAGCTCTCTATAGCGAGACCATTCAAGATCATCTTGCTCCTAGTGGTTACTACA 529
|||| | || | ||||||||||| | |||| |||||| ||||||| |||||||| | ||
Sbjct 479 TCAAAGCAGATGTCTATAGCGAGTTCGTTCAGGATCATTTTGCTCCCAGTGGTTATTTCA 538
Query 530 AAATCCCTAATG-ATATGAAACAG-TACTTGGAAAGA-TCTAAGTATCTACCTAAGCTTA 586
||| ||||| || ||||||| || ||| |||||| | || |||||||| ||||||||||
Sbjct 539 AAAACCCTA-TGGATATGAAG-AGGTACCTGGAAA-ACTCGAAGTATCTGCCTAAGCTTA 595
Query 587 ACAACGAGATACCAAACCAAAGAAAC-CAAACTTACAAAGACCGTTTCACCAGTTTACAC 645
||| ||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||
Sbjct 596 GCAATGAGATACCAAACCAAAGAAACTCAA-CTTACAAAGATCGTTTCACCAGTTTACAC 654
Query 646 AACCTGGTTCTTGTCAAGTTTCAGGACGATGAGG-TTATTACTCC-AAATGATTCAACTT 703
|| ||||||||||||||||||||| |||| | | |||| | ||| |||||| |||||||
Sbjct 655 AATCTGGTTCTTGTCAAGTTTCAGAACGAA-ACGATTATCA-TCCCAAATGACTCAACTT 712
Query 704 GGTTTGGGTTTTATCCGGATGGTGAGTTCGAAACTC-TTCTCTCTGCTAACCAGACAAAG 762
|||| |||||||| ||||||||| || ||||| | | ||||| | |||||| ||||| |
Sbjct 713 GGTTCGGGTTTTACCCGGATGGTCAGGTCGAACC-CGTTCTCCCGGCTAACAAGACAGCG 771
Query 763 CTCTATACAGAGGATTGGATCGG-TCTGAAAACATTGGATGATGCTGGAAAAGTGAAGTT 821
||||| || |||||||||||||| | ||||||||||||||| |||||||||||||||||
Sbjct 772 CTCTACACCGAGGATTGGATCGGAT-TGAAAACATTGGATGCGGCTGGAAAAGTGAAGTT 830
Query 822 TGTGAGTGTACCCGGTGGACATGTCAGAA-TGGCAGAAGAAGATGTCGTCAAATACGTTG 880
||||||||||| ||||||||| || ||| ||||||| | |||||| |||||||| | |
Sbjct 831 CGTGAGTGTACCAGGTGGACATCTC-GAAATGGCAGATCATGATGTCCTCAAATACATCG 889
Query 881 TACCTTATCTCCAGAACCAA 900
| || ||||| ||||| |||
Sbjct 890 TCCCGTATCTTCAGAATCAA 909
> Ahg948213 jgi|Araly1|948213|scaffold_800100.1
Length=495
Score = 368 bits (199), Expect = 4e-101
Identities = 306/357 (86%), Gaps = 9/357 (3%)
Strand=Plus/Plus
Query 65 TCTCAGTTTCAGTTCCGTTCATAATGCTTCACGGAATCGCATCT-CAATGTTCTGATGAT 123
||||||| || ||||||||| | |||||||||||||| | || | ||||| |||
Sbjct 92 TCTCAGTCTCGGTTCCGTTCGTCGTGCTTCACGGAATCACCGCTGC-GTGTTCCGATCCG 150
Query 124 ACAAATGCTAACTTCACACAGCTTCTCACT-AACCTCTCTGGCTCTCCTGGCTTTTGCTT 182
|| ||||| ||||||||||||||||||| | |||||||||||||||| || | |||||
Sbjct 151 ACGAATGCCAACTTCACACAGCTTCTCA-TGAACCTCTCTGGCTCTCAAGGGTCATGCTT 209
Query 183 AGAAATT-G-GA-AATGGAGTAA-TAAATTCAATGTTCTTGCCACTTACACAACAAGCAG 238
||||||| | || |||||| || | | |||||| ||| ||||||||||||| ||||| |
Sbjct 210 AGAAATTGGAGACAATGGA-CAACTCACTTCAATCTTCATGCCACTTACACAGCAAGCTG 268
Query 239 AAATAGCATGTGAGAATGTGAAGGAAATGAAAGAGTTGAGTCAAGGATACAACATTGTTG 298
|||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct 269 AAATAGCATGTGAGAAGGTGAAGCAAATGAAAGAGTTGAGTCAAGGATACAACATTGTTG 328
Query 299 GAAGATCTCAGGGGAACCTAGTGGCTCGAGGCTTGATCGAGTTCTGCGACGGTGGACCTC 358
||||||||||||||||| |||||||||||||||||||||| ||||||||||| || ||||
Sbjct 329 GAAGATCTCAGGGGAACTTAGTGGCTCGAGGCTTGATCGAATTCTGCGACGGCGGGCCTC 388
Query 359 CTGTTTTCAACTATATATCCTTAGCTGGTCCTCATGCTGGCATTTCTTCTCTTCCTA 415
| |||| |||||| ||||| |||| ||||||||||||||| || || ||| ||||||
Sbjct 389 CGGTTTACAACTACATATCTTTAGGTGGTCCTCATGCTGGGATATCCTCTGTTCCTA 445
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 35416189893
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5