BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G49470.2
Length=3018
Score E
Sequences producing significant alignments: (Bits) Value
Ahg495004 jgi|Araly1|495004|fgenesh2_kg.8__820__AT5G49470.2 3110 0.0
Ahg475897 jgi|Araly1|475897|fgenesh2_kg.2__1027__AT1G67890.1 1831 0.0
Ahg477969 jgi|Araly1|477969|fgenesh2_kg.3__670__AT3G06620.1 1120 0.0
Ahg477972 jgi|Araly1|477972|fgenesh2_kg.3__673__AT3G06640.1 798 0.0
Ahg903543 jgi|Araly1|903543|Al_scaffold_0003_671 510 2e-143
> Ahg495004 jgi|Araly1|495004|fgenesh2_kg.8__820__AT5G49470.2
Length=3096
Score = 3110 bits (1684), Expect = 0.0
Identities = 1949/2073 (94%), Gaps = 34/2073 (2%)
Strand=Plus/Plus
Query 1 AAAGATAAGCAAATTAGTTTTCCTTCTTTGTTGACTCTCTCCAGATTCTGTTTCTTCTTC 60
||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1 AAAGATAAGCACAGAAGTTTTCCTTCATTGTTGACTCTCTCCAGATTCTGTTTCTTCTTC 60
Query 61 --C-T--T-AATCCATCTCTCAAGC-TTCTCCACCATTTTCACCTTGATTCAGCTTCTCC 113
| | | |||||||||||||||| || |||||||||||| || |||||||||||| ||
Sbjct 61 TTCTTCCTAAATCCATCTCTCAAGCTTTTTCCACCATTTTCGCCGTGATTCAGCTTCACC 120
Query 114 GATTCAAACTCAGATTTGATCTCCGTTGATTTGATTTGACTGCG--TTTTTCTGGCAATG 171
||||||||||||||||||||||||||||||| |||||||||||| ||||| | ||||||
Sbjct 121 GATTCAAACTCAGATTTGATCTCCGTTGATTAGATTTGACTGCGTTTTTTTTTCGCAATG 180
Query 172 GAGAAGACGACTCCACCAGCGGAGGAGCTTCTAAAGAAGATACGAGAGTTAGAAGAAAGC 231
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 181 GAGAAGACGACTCCACCAGCGGAGGAGCTTCTTAAGAAGATACGAGAGTTAGAAGAAAGC 240
Query 232 CAAGAGCATCTAAAACGAGAGATGTCGAGACTTAAAGTATCGGCGGAGATGAAGCAGCGT 291
|||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 241 CAAGAGCATCTAAAGCGAGAGATGTCGCGACTTAAAGTATCGGCGGAGATGAAGCAGCGT 300
Query 292 TCGCATTCAGCATCGCCGCAACGTCCTGTGAGGAGAAACAGT-AACGACGGAACTCCGAT 350
||||||||||| |||||||||||||||||||||||||| ||| | ||||||||||||||
Sbjct 301 TCGCATTCAGCGTCGCCGCAACGTCCTGTGAGGAGAAATAGTGGA-GACGGAACTCCGAT 359
Query 351 GTGGAGAAAAACCGGTGCGGCTTCGTTTCGTCACGCTTCTCCGTTGCGTAAGGAGAGCCA 410
||||||||||| ||||||||||||||||||||| ||||| |||||||| |||||||||||
Sbjct 360 GTGGAGAAAAAGCGGTGCGGCTTCGTTTCGTCATGCTTCGCCGTTGCGGAAGGAGAGCCA 419
Query 411 TGCGAAAGTTGC-----C-GGCGGC-G-GA-GGCGAGGGGCAATCGGCAGGCAAGTTCAC 461
|||||||||||| | || ||| | || |||||||| ||||||||||||||||||||
Sbjct 420 TGCGAAAGTTGCTGGAGCTGGTGGCGGTGACGGCGAGGGACAATCGGCAGGCAAGTTCAC 479
Query 462 CGATAAACAGTATTTGAATATTTTGCAGTCTATGGCTCAAGCTGTTCATGTCTTCGATCT 521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 480 CGATAAACAGTATTTGAATATTTTGCAGTCTATGGCTCAAGCTGTTCATGTCTTCGATCT 539
Query 522 AAATGGCCAAATTATCTTTTGGAACTCAATGGCGGAGAA-GCTTTATGGATTCTCAGCTT 580
|||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct 540 AAATGGCCAAATTATCTTTTGGAACTCAATGGCGGA-AAGGCTTTATGGATTCTCAGCTG 598
Query 581 CAGAAGCACTGGGGAAGGATCCGATTGATATTCTTGTAGATGTTCAGGATGCTTCGGTTG 640
| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 599 CTGAAGCACTTGGGAAGGATCCGATTGATATTCTTGTAGATGGTCAGGATGCTTCGGTTG 658
Query 641 CACAGAATATCACTCGGCGTTGCAGTAGTGGAGAGAGTTGGACTGGTGAGTTTCCTGTAA 700
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 659 CACAGAATATCACTCGGCGTTGCAGTAGTGGAGAGAGTTGGACTGGTGAGTTTCCTGTCA 718
Query 701 AGAACAAAGCTGGAGAGAGGTTTTCAGTTGTGACTACGATGTCTCCTTCTTATGATGATG 760
|||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 719 AGAACAAAGCCGGAGAGAGGTTTTCAGTTGTGACTACGATGTCTCCTTCATATGATGATG 778
Query 761 ATGGTTGTCTTATTGGGATCATATGTATCACAAATGATTCGGCACTCTTTCAAGACCCGA 820
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 779 ATGGTTCTCTTATTGGGATCATATGTATCACAAATGATTCGGCACTCTTTCAAGACCCGA 838
Query 821 GAGGCTCTCCGGCTAAGACAAGGAGGGGGCAAGAAGGTGAAACGAGCTTTAGTCGGGTGA 880
||||||||||||||||||| | |||||||||||||| || ||||||||||| |||||||
Sbjct 839 GAGGCTCTCCGGCTAAGAC-A--AGGGGGCAAGAAGGGGAGACGAGCTTTAGCCGGGTGA 895
Query 881 CTAGTAGTGTTGCATCTAAGCTTGGTCTTGACTCGAAAGAGGCGGTTGTATCAAAACTTG 940
||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |
Sbjct 896 CTAGTAGTGTTGCATCTAAGCTTGGTCTTGACTCGAAAGAGGCTGTTGTATCGAAACTCG 955
Query 941 GCCTTGATTCTCAGCAGCCTATACAAGTTGCTATAGCTTCAAAGATATCAGATTTGGTGG 1000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 956 GCCTTGATTCTCAGCAGCCTATACAAGTTGCTATAGCTTCAAAGATATCAGATTTGGTGG 1015
Query 1001 GCAACAAGGTCAAGTCGAAAATGCGAGCAGGTGATAATAACGCTGCAAACCTTGAGGGTG 1060
|||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 1016 GCAACAAGGTCAAGTCAAAAATGCGAGCAGGTGATAATAATGCTGCAAATCTTGAGGGTG 1075
Query 1061 GAAGTGGGGACAGTCATCAATCTGATCAGGGTTTCTTTGATGCTGCTTTCGCTGACCGGA 1120
||||||||||||||||||| || |||||||| |||||||||||| | ||| |||||||||
Sbjct 1076 GAAGTGGGGACAGTCATCAGTCCGATCAGGGGTTCTTTGATGCTACCTTCTCTGACCGGA 1135
Query 1121 GGGAGGATGCAGCAACAAGTGGTGCTGATACACCTAGGGGGGATTTTATCCAATCTCCTT 1180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1136 GGGAGGATGCAGCAACAAGTGGTGCTGATACACCTAGGGGGGATTTTATCCAATCTCCAT 1195
Query 1181 TTGGTGTATTCTTACGTAGCGATGAGAAAGCTTCTACAAAGCCCTTCAGAGATTCCAGTG 1240
|||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||
Sbjct 1196 TTGGTGTATTCTTACGTAGCGATGAGAAGGCTTCTTCAAAGCCGTTCAGAGATTCCAGTG 1255
Query 1241 ATGAAAGTGATGGAAACTCTGTTGTACCTAAAACACTGACCTCAAAAGCTGAAGAGTGGA 1300
|||||| ||| |||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 1256 ATGAAAATGACGGAAACTCTGTTATCCCTAAAACACTGACCTCAAAAGCTGAAGAGTGGA 1315
Query 1301 TGGTAAAGAAAGGATTATCATGGCCATGGAAAGGGAATGAAAGGGAAGGTTTGGAAGGAA 1360
||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct 1316 TGGTAAAGAAAGGATTATCATGGCCGTGGAAAGGGAATGAAAGGGAAGGTTCGGAAGGAA 1375
Query 1361 GGCGTAGTCATTCTGTGTGGCCTTGGGTGCGGAATGAACAACAAAAACAACAGGCTTATC 1420
|||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||| ||||
Sbjct 1376 GGCGTAGTCATTCTGTGTGGCCTTGGATGCAGAATGAACAACATAAAGAACAGGCATATC 1435
Query 1421 AAAGCAATTCTAATCACAGTGTTAAGTCTGAAAGCCAGGCATGTGAAAGTATTAAGGCTT 1480
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1436 AAAGTAATTCTAATCACAGTGTTAAGTCTGAAAGCCAGGCATGTGAAAGTATTAAGGCTT 1495
Query 1481 CCAGTAACGAGCCTATGGGGTATTGGTCTTCCTCTGTTAATGTGAACAGCACAAGCAGTA 1540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1496 CCAGTAACGAGCCTATGGGGTATTGGTCTTCCTCTGTTAATGTGAACAGCACAAGCAGTA 1555
Query 1541 GTAGCAGCTGTGGAAGTACCAGCAGCAGTGTTATGAACAAGGTCGATATGGATAGTGACT 1600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1556 GTAGCAGCTGTGGAAGTACCAGCAGCAGTGTTATGAACAAGGTCGATATGGATAGTGACT 1615
Query 1601 GCTTGGATTATGAAATCTTATGGGAAGATTTGACAATTGGAGAACAAATCGGGCAAGGTT 1660
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct 1616 GCTTGGATTATGAAATCTTATGGGATGACTTGACAATTGGAGAACAAATCGGGCAAGGTT 1675
Query 1661 CATGTGGAACTGTCTATCACGGTCTATGGTTTGGATCCGATGTGGCTGTAAAGGTGTTTT 1720
|||| |||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 1676 CATGCGGAACTGTTTATCACGGTCTGTGGTTTGGATCTGATGTGGCTGTAAAGGTGTTTT 1735
Query 1721 CCAAACAAGAATATTCAGAAGAGATCATAACATCTTTTAGACAAGAGGTATCGTTGATGA 1780
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1736 CCAAACAAGAATATTCAGAAGAGATCATAACATCTTTTAGACAAGAGGTATCATTGATGA 1795
Query 1781 AAAGACTTAGACATCCTAACGTTTTACTGTTTATGGGAGCCGTGACATCACCTCAGCGTC 1840
|||||||| |||| || |||||||| || ||||||||||| |||||||| ||||||||||
Sbjct 1796 AAAGACTTCGACACCCGAACGTTTTGCTATTTATGGGAGCTGTGACATCGCCTCAGCGTC 1855
Query 1841 TCTGTATAGTGACAGAGTTCCTTCCACGGTTTGGTCTTAT-TACTTTGGCTAATATTACA 1899
|||||||||| |||||||||||||||||||| ||||| || | |||||||||||| ||||
Sbjct 1856 TCTGTATAGTAACAGAGTTCCTTCCACGGTTCGGTCTCATCT-CTTTGGCTAATAGTACA 1914
Query 1900 CTTCCTTTTGTGCTATTCGAACTCCGGGGCCAAAACTCTGACTTACCC-TA--T----CA 1952
| ||||||| |||| || || ||||||||||||||||||||| |||| || | ||
Sbjct 1915 CGTCCTTTTTTGCTTTTTAAAATCCGGGGCCAAAACTCTGACTCACCCCTAAATTTATCA 1974
Query 1953 AATAACATTTGCAGTGGAAGTCTCTTCCGTTTGCTGCAGAGGAACACGTCAAAACTGGAT 2012
|||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1975 AATAACATATGCAGTGGAAGTCTCTTCCGGTTGCTGCAGAGGAACACGTCAAAACTGGAT 2034
Query 2013 TGGAGGCGACGTATCCATATGGCCTCGGATATT 2045
||||||||||||||||||||||||||||| |||
Sbjct 2035 TGGAGGCGACGTATCCATATGGCCTCGGACATT 2067
Score = 1345 bits (728), Expect = 0.0
Identities = 895/973 (92%), Gaps = 21/973 (2%)
Strand=Plus/Plus
Query 2045 TCTATCTTGCGTATTATTCTTTGGAC-TCTTTAATTCAGTTACTGTATCT-TGTCTACAA 2102
||| |||||| ||| ||||||| | ||||| |||||| ||||||||| | |||||||
Sbjct 2128 TCTGTCTTGCATATCATTCTTTTCCCTTCTTTGATTCAGCCACTGTATCTCT-TCTACAA 2186
Query 2103 CATGTTACACATTTTTCTTACATACTTCTTCGCACAGGCTCGTGGCATGAATTATCTTCA 2162
||||||||| || |||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct 2187 CATGTTACATATATTTCTTACATACGTCTTCCCACAGGCTCGTGGCATGAATTATCTTCA 2246
Query 2163 CCATTGTACTCCACCGATCATTCACCGAGATTTGAAGTCATCAAATCTACTGGTTGATAA 2222
||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||
Sbjct 2247 CCATTGTACTCCACCCATCATTCACCGAGATCTGAAGTCGTCAAATCTACTGGTTGATCG 2306
Query 2223 AAACTGGACCGTGAAGGTTGCTGACTTTGGTCTTTCGCGTATCAAGCATGAGACGTACCT 2282
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 2307 AAACTGGACCGTGAAGGTTGCTGATTTTGGTCTTTCGCGTATCAAGCATGAGACATACCT 2366
Query 2283 CACTACAAAGACAGGAAGGGGAACGCCTCAATGGATGGCACCGGAAGTTCTCCGAAATGA 2342
|||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 2367 CACTACAAAGACTGGAAGGGGAACGCCTCAATGGATGGCACCAGAAGTTCTTCGAAATGA 2426
Query 2343 GGCTGCTGATGAAAAGTCTGACGTTTACAGCTTTGGAGTAATACTATGGGAGCTGGTGAC 2402
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct 2427 GGCTGCTGATGAAAAGTCCGACGTTTACAGCTTTGGAGTAATACTATGGGAGCTTGTGAC 2486
Query 2403 TGAGAAGATCCCGTGGGAAAGTCTAAATGCTATGCAGGTGATTGGAGCTGTAGGGTTCAT 2462
|||||||||||||||||||| ||||||| | |||||||||||||||||||| ||||||||
Sbjct 2487 TGAGAAGATCCCGTGGGAAAATCTAAATCCCATGCAGGTGATTGGAGCTGTGGGGTTCAT 2546
Query 2463 GAACCAGAGACTGGAAGTCCCGAAAAATGTTGATCCTCAGTGGATTTCTTTAATGGAAAG 2522
||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2547 GAACCAGAGGCTGGAAGTCCCGAAGAATGTTGATCCTCAGTGGATTTCTTTAATGGAAAG 2606
Query 2523 CTGCTGGCATAGTGAACCGCAGGACAGACCATCGTTCCAAGAAATTATGGAGAAACTAAG 2582
|||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||
Sbjct 2607 CTGCTGGCATAGTGAACCGCAGCACAGACCATCGTTTCAAGAAATCATGGAGAAACTAAG 2666
Query 2583 AGAGCTTCAAAGAAAGTACACTATACAGTTTCAGGCGGCTCGTGCTGCATCAATAGAAAA 2642
||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct 2667 AGAGCTTCAAAGAAAGTACACAATACAGTTCCAGGCGGCTCGTGCTGCATCAATAGAAAA 2726
Query 2643 CTCTGCCCTCAAGGAAAAATAAACCATTAAATGGACCGAGCGGAGTCTGATTATGCGTTG 2702
|||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||
Sbjct 2727 CTCTGCCCTCAAGGAAAAATAAACCATTAAATGGACAGAGCTAAAACTGATTATGCGTTG 2786
Query 2703 A-GAAAGCTGAGCTACATAAGCAAAGCAGAAAGGTGTTTCATGTTTGCGTTGAAGCGCAA 2761
| ||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct 2787 ATGAA-GCTGAGCTACATAAGCAAAGCAGAAAGGTGTTTTGTGTTTGTGTTGAAGCGCAA 2845
Query 2762 TGACGAGAA-GCACCAAAAAGAAGG-GTTTTGGTATATGCAAACATATTCTCTC-GA--- 2815
||||||||| ||||||| ||||| | |||||||||||||| || |||||||||| ||
Sbjct 2846 TGACGAGAAAGCACCAACAAGAAAGAGTTTTGGTATATGCGAATATATTCTCTCTGATTA 2905
Query 2816 ---G--CCATTCTTTTGTATGGAATTGATTCTGAAAACGTCATC-GATTGCGAGGCGAGC 2869
| ||||||||||||||||||||||||||||||||||||| | |||| ||||||||
Sbjct 2906 CAAGAGCCATTCTTTTGTATGGAATTGATTCTGAAAACGTCATGTGCTTGCTAGGCGAGC 2965
Query 2870 TAAAGAGGTTATTTATGTAAAACCATTATGCCTG-TGACAGACCCAATTTTTTAA-GAAT 2927
|| ||||||||||||| ||||||||||||||||| | |||||||||||||||||| ||||
Sbjct 2966 TAGAGAGGTTATTTATATAAAACCATTATGCCTGAT-ACAGACCCAATTTTTTAAAGAAT 3024
Query 2928 AGTCTGTACAGGTGAAAGTATGAGATAGAATCAAGATTTGGAACACTGATTCTGAGTAAA 2987
||||||||||||| |||||||||||||||||||||||||||| || ||||| ||||||||
Sbjct 3025 AGTCTGTACAGGTAAAAGTATGAGATAGAATCAAGATTTGGA-CAGTGATTTTGAGTAAA 3083
Query 2988 TATTGCCATTTTT 3000
|||||||| ||||
Sbjct 3084 TATTGCCACTTTT 3096
> Ahg475897 jgi|Araly1|475897|fgenesh2_kg.2__1027__AT1G67890.1
Length=2769
Score = 1831 bits (991), Expect = 0.0
Identities = 1485/1713 (87%), Gaps = 75/1713 (4%)
Strand=Plus/Plus
Query 183 TCCACCAGCGGAGGAGCT-TCTAAAGAAGATACGAGAGTTAGAAGAAAGCCAAG-AGCAT 240
||||||||| ||| |||| | | ||||||||||||||| ||||||||||||||| || ||
Sbjct 141 TCCACCAGCAGAGAAGCTAT-TGAAGAAGATACGAGAGCTAGAAGAAAGCCAAGAAG-AT 198
Query 241 CTAAAACGAGAGATGTCGAGACTTAAAGTATCGGCGGAGATGAAGCA-GCGTTCGCATTC 299
||||| ||||||||||||| ||| |||||||| |||||||| || | ||||||||||||
Sbjct 199 CTAAAGCGAGAGATGTCGAAACTCAAAGTATCTGCGGAGATTAA-AAGGCGTTCGCATTC 257
Query 300 AGCATCGCCGCAACGTCCTGT-GAGGAGAAACAGT-AACGACGGAACTCCGATGTGGAGA 357
|||| || |||| ||| | ||||||||||| | | |||||||||||| | ||||||
Sbjct 258 TTCATCACCTAAACGACCT-TCGAGGAGAAACACTGGA-GACGGAACTCCGTTATGGAGA 315
Query 358 AAAACCGGTGCGGCTTCGTTTCGTCACGCTTCTCCGTTGCGTAAGGAGAGCCATGCGAAA 417
|||| ||| || || ||||| ||||||||||||||||| || || |||| | | |
Sbjct 316 AAAAGCGGCGCCGCATCGTTCCGTCACGCTTCTCCGTTACGGAA--AGAG----G-G--A 366
Query 418 GTTGCCGGCGGCGGAGGCGAGGGGCAATCGGCAGGCAAGTTCACCGATAAACAGTATTTG 477
| | || || || || || | ||||||||||||||||||||||||||||||||||
Sbjct 367 ---G-C--TGGTGGTGGTGAAGGACCATCGGCAGGCAAGTTCACCGATAAACAGTATTTG 420
Query 478 AATATTTTGCAGTCTATGGCTCAAGCTGTTCATGTCTTCGATCTAAATGGCCAAATTATC 537
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 421 AATATTTTGCAGTCTATGGCTCAAGCTGTTCATGTCTTCGATCTTAATGGCCAAATTATC 480
Query 538 TTTTGGAACTCAATGGCGGAGAAGCTTTATGGATTCTCAGCTTCAGAAGCACTGGGGAAG 597
||||||||||| |||||||||||||||||||||||||||||| ||||||| | ||||||
Sbjct 481 TTTTGGAACTCGATGGCGGAGAAGCTTTATGGATTCTCAGCTGCAGAAGCGTTAGGGAAG 540
Query 598 GA-TCCGATTGATATTCTTGTAGATGTTCAGGATGCTTCGGTTGCACAGAATATCACTCG 656
|| || |||| |||| |||||||||| |||||||||| | ||||||||||||||| ||
Sbjct 541 GACTC-GATTAATATACTTGTAGATGGTCAGGATGCTGCTGTTGCACAGAATATCTTTCA 599
Query 657 GCGTTGCAGTAGTGGAGAGAGTTGGACTGGTGAGTTTCCTGTAAAGAACAAAGCTGGAGA 716
||||||||| |||||||||||||||||||| ||||||||||| ||||||||||| |||||
Sbjct 600 GCGTTGCAGCAGTGGAGAGAGTTGGACTGGAGAGTTTCCTGTCAAGAACAAAGCAGGAGA 659
Query 717 GAGGTTTTCAGTTGTGACTACGATGTCTCCTTCTTATGATGATGA-TGGTTGTCTTATTG 775
||| ||||| |||||||| || || ||||||| |||||||||| | || || ||||||||
Sbjct 660 GAGATTTTCGGTTGTGACCACAATTTCTCCTTTTTATGATGAT-ACTGATTCTCTTATTG 718
Query 776 GGATCATATGTATCACAAATGATTCGGCACTCTTTCAA-GACCCGAGAGGCTC-TCCGGC 833
|||| ||||||||||| || |||||||||||||||||| | |||||||| || || ||
Sbjct 719 GGATTATATGTATCACGAACGATTCGGCACTCTTTCAACG-CCCGAGAGT-TCCTCTAGC 776
Query 834 TAAGACAAGGAGGGGGCAAGAAGGTGAAACGAGCTTTAGTCGGGTGACTAGTAGTGTTGC 893
||| |||||| ||| |||||||| ||||| |||||||| |||| ||| | | |||||||
Sbjct 777 TAAAACAAGG-GGG--CAAGAAGGGGAAACTAGCTTTAGCCGGGGGACGAATGGTGTTGC 833
Query 894 ATCTAAGCTTGGTCTTGACTCGAAAGAGGCGGTTGTATCAAAACTTGGCCTTGATTCTCA 953
||||| ||||||| |||| || |||||||| ||||| || ||||||||||||||||||||
Sbjct 834 ATCTAGGCTTGGTTTTGATTCCAAAGAGGCTGTTGTGTCGAAACTTGGCCTTGATTCTCA 893
Query 954 GCAGCCTATACAAGTTGCTATAGCTTCAAAGATATCAGATTTGG--T----GG-G--CAA 1004
||||||||| |||||||||||||| || |||||||||||||||| | || | |||
Sbjct 894 GCAGCCTATTCAAGTTGCTATAGCATCTAAGATATCAGATTTGGCATCCAAGGTGGGCAA 953
Query 1005 CAAGGTCAAGTCGAAAATGCGAGCAGGTGATAATAACGC-TGCAAACCTTGAGGGTGGAA 1063
|||||||| |||||||||||||||||||||||||||||| | || ||| |||||||||||
Sbjct 954 CAAGGTCAGGTCGAAAATGCGAGCAGGTGATAATAACGCCT-CACACCCTGAGGGTGGAA 1012
Query 1064 GTGGGGACAGTCATCAATCTGATCAGGGTTTCTTT-GATGCTGCTTTCGCTGACCGGAGG 1122
||||| ||||||||| |||||||||||||| ||| |||||||||||| |||||| ||||
Sbjct 1013 ATGGGGGCAGTCATCAGTCTGATCAGGGTTT-TTTCGATGCTGCTTTCTCTGACCAGAGG 1071
Query 1123 GAGGATGCAGCAACAAGTGGTGCT-GATACACCTAGGGGGGATTTTATCCAATCTCCTTT 1181
|||||||||| ||||||||||||| | ||||||||||||||||| ||||| ||||||||
Sbjct 1072 GAGGATGCAGAAACAAGTGGTGCTAGC-ACACCTAGGGGGGATTTGATCCAGTCTCCTTT 1130
Query 1182 TGGTGTATTCTTACGTAGCGATGAGAAAGCTTCTAC-AAAGCCCTTCAGAGATTCCAGTG 1240
|||||| |||||| ||| |||||||||| | ||| | ||| |||| |||||| |||| ||
Sbjct 1131 TGGTGTGTTCTTATGTAACGATGAGAAATCGTCTTCGAAA-CCCTCCAGAGAATCCAATG 1189
Query 1241 ATGAAAGTGATGGAAACTCTGTTGTACCTAAAACACTGACCTCAAAAGCTGAAGAGTGGA 1300
|||||| |||||||||||||||| | ||||| ||||| ||||||||| ||||||||||||
Sbjct 1190 ATGAAAATGATGGAAACTCTGTTATCCCTAAGACACTTACCTCAAAAACTGAAGAGTGGA 1249
Query 1301 TGGTAAAGAAAGGATTATCATGGCCATGGAAAGGGAATGAA-AGGGAAGGTTTGGAAGGA 1359
|||||||||||||| | ||||||||||||||||||||||| ||| ||||||||||| ||
Sbjct 1250 TGGTAAAGAAAGGACTGCCATGGCCATGGAAAGGGAATGAACAGG-AAGGTTTGGAAAGA 1308
Query 1360 AGGCGTAG-TCATTCTGTGTGGCCTTGGGTGCGGAATGAACAACAAAAACAACAGGCTTA 1418
| | | ||||||||||||||||||||||| |||||||||||| ||| || ||||| |
Sbjct 1309 AAAAAT-GCTCATTCTGTGTGGCCTTGGGTGCAGAATGAACAACAGAAAGAAGAGGCTCA 1367
Query 1419 TCAAAGC-AATTC-TAATCACAGTGTTAAGTCTGAAAGCCAGGCATGTGAAAGTATTAAG 1476
||| | | ||||| || | | | |||||||||||||||||||||| ||||||||| |||
Sbjct 1368 TCATA-CTAATTCCTA-TAATAATGTTAAGTCTGAAAGCCAGGCAAGTGAAAGTAATAAA 1425
Query 1477 GCTTCCAGTAACGAGCCTATGGGGTATTGGTCTTCCTCTGTTAATGTGAACAGCACAAGC 1536
|| ||| ||||||| |||||| | | || | | |||||||| ||| |||||
Sbjct 1426 CCTGCCAATAACGAGAATATGGG-T-T----CTA--T-T---AATGTGAATAGCGCAAGC 1473
Query 1537 AGTAG-TAGCAGCTGTGGAAGTACCAGCAGCAGTGTTATGAACAAGGTCGATATGGATAG 1595
||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1474 AGT-GCTAGCAGCTGTGGAAGTACCAGCAGCAGTGTTATGAACAAGGTCGATATGGATAG 1532
Query 1596 TGACTGCTTGGATTATGAAATCTTATGGGAAGATTTGACAATTGGAGAACAAATCGGGCA 1655
|||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1533 CGACTGCTTGGATTACGAAATCTTATGGGAAGATTTGACAATTGGAGAGCAAATCGGGCA 1592
Query 1656 AGGTTCATGTGGAACTGTCTATCACGGTCTATGGTTTGGATCCGATGTGGCTGTAAAGGT 1715
|||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||
Sbjct 1593 AGGTTCATGTGGAACTGTCTATCATGGTCTATGGTTTGGATCTGATGTGGCTGTTAAGGT 1652
Query 1716 GTTTTCCAAACAAGAATATTCAGAAGAGATCATAACATCTTTTAGACAAGAGGTATCGTT 1775
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1653 GTTTTCCAAACAAGAATATTCAGAAGAGATCATAACATCTTTTAAACAAGAGGTATCGTT 1712
Query 1776 GATGAAAAGACTTAGACATCCTAACGTTTTACTGTTTATGGGAGCCGTGACATCACCTCA 1835
||||||||||||||||||||| |||||| | |||||||||||||| ||| ||||||||||
Sbjct 1713 GATGAAAAGACTTAGACATCCAAACGTTCTGCTGTTTATGGGAGCTGTGGCATCACCTCA 1772
Query 1836 GCGTCTCTGTATAGTGACAGAGTTCCTTCCACG 1868
|||||| ||||||||||||||||| ||||||||
Sbjct 1773 GCGTCTTTGTATAGTGACAGAGTTTCTTCCACG 1805
Score = 678 bits (367), Expect = 0.0
Identities = 477/530 (90%), Gaps = 7/530 (1%)
Strand=Plus/Plus
Query 2140 GCTCGTGGCATGAATTATCTTCACCATTGTACTCCACCGATCATTCACCGAGATTTGAAG 2199
||||| |||||||||||||||||||| |||| |||||| ||||||||||| ||| |||||
Sbjct 1885 GCTCGGGGCATGAATTATCTTCACCACTGTAGTCCACCCATCATTCACCGTGATCTGAAG 1944
Query 2200 TCATCAAATCTACTGGTTGATAAAAACTGGACCGTGAAGGTTGCTGACTTTGGTCTTTCG 2259
|| |||||||||||||| ||| |||||||| ||||||||||||||||||||||||||
Sbjct 1945 TCGTCAAATCTACTGGTCGATCGGAACTGGACTGTGAAGGTTGCTGACTTTGGTCTTTCT 2004
Query 2260 CGTATCAAGCATGAGACGTACCTCACTACAAAGACAGGAAGGGGAACGCCTCAATGGATG 2319
|| |||||||||||||||||||||||||| | || ||||||||||| ||||||||||||
Sbjct 2005 CGCATCAAGCATGAGACGTACCTCACTAC-GA-AC-GGAAGGGGAACACCTCAATGGATG 2061
Query 2320 GCACCGGAAGTTCTCCGAAATGAGGCTGCTGATGAAAAGTCTGACGTTTACAGCTTTGGA 2379
||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2062 GCACCAGAAGTTCTTCGAAATGAGGCTGCTGATGAAAAGTCTGATGTTTACAGCTTTGGA 2121
Query 2380 GTAATACTATGGGAGCTGGTGACTGAGAAGATCCCGTGGGAAAGTCTAAATGCTATGCAG 2439
||| ||||||||||||| ||||| ||||||||||| ||||||| ||||||||||||||||
Sbjct 2122 GTAGTACTATGGGAGCTTGTGACAGAGAAGATCCCATGGGAAAATCTAAATGCTATGCAG 2181
Query 2440 GTGATTGGAGCTGTAGGGTTCATGAACCAGAGACTGGAAGTCCCGAAA-AATGTTGATCC 2498
|||||||||||||| ||||||||||||||||| || ||| |||| ||| | ||||| ||
Sbjct 2182 GTGATTGGAGCTGTGGGGTTCATGAACCAGAGGCTAGAACTCCC-AAAGGACGTTGACCC 2240
Query 2499 TCAGTGGATTTCTTTAATGGAAAGCTGCTGGCATAGTGAACCGCAG-GACAGACCATCGT 2557
|||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||
Sbjct 2241 TCAGTGGATTTCTTTAATGGAAAGCTGCTGGCATAGCGAACCGCAGTGT-AGACCATCGT 2299
Query 2558 TCCAAGAAATTATGGAGAAACTAAGAGAGCTTCAAAGAAAGTACACTATACAGTTTCAGG 2617
|||||||| | ||||| |||||||||||||||||||||||||||||| ||||||| ||||
Sbjct 2300 TCCAAGAACTGATGGACAAACTAAGAGAGCTTCAAAGAAAGTACACTGTACAGTTCCAGG 2359
Query 2618 CGGCTCGTGCTGCATCAATAGAAAACTCTGCCCTCAAGGAAAAATAAACC 2667
| |||||||||| ||||||||| |||||| | | |||| ||||||||||
Sbjct 2360 CAGCTCGTGCTGGATCAATAGACAACTCTTCTATGAAGGGAAAATAAACC 2409
> Ahg477969 jgi|Araly1|477969|fgenesh2_kg.3__670__AT3G06620.1
Length=3122
Score = 1120 bits (606), Expect = 0.0
Identities = 1384/1748 (79%), Gaps = 100/1748 (6%)
Strand=Plus/Plus
Query 183 TCCACCAGCGGAGGAGCTTCTAAAGAAGATACGAGAGTTAGAAGAAAGCCAAGAGCATCT 242
|||||| ||||||||||| || |||||||||| |||| |||| || || || ||||||||
Sbjct 277 TCCACCTGCGGAGGAGCTGCTGAAGAAGATACTAGAGCTAGAGGAGAGTCAGGAGCATCT 336
Query 243 AAAACGA-GAGATGTCGAGACTTAAAGTATCGGCGGAGATGAAGCAGCGTTCGCATTCAG 301
||| | | |||||||| || ||||||||||| ||||| | | |||||| |||||||| |
Sbjct 337 AAAGC-AGGAGATGTCTAGGCTTAAAGTATCCACGGAGCTTAGGCAGCGATCGCATTCGG 395
Query 302 CATCGCCGCAACGTCCTGTGAGGAGAAAC-AGT-AACGACGGAACTCCGATGTGGAGAAA 359
|| || || ||||| | |||||| ||| | | ||| ||| ||||| |||||| ||
Sbjct 396 TGTCTCCTCATCGTCCGGCGAGGAG-AACTA-TCGGCGAGGGAGCTCCGGCGTGGAGGAA 453
Query 360 AACCGGTGCGGCTTCGTTTCGTCACGCTTCTCCGTTGCGTAAGGAGAGCC--AT---G-- 412
| |||||| || ||||||||| ||||||| ||||| | |||||||||| || |
Sbjct 454 GAGCGGTGCCGCCTCGTTTCGTAACGCTTCGCCGTTAAGGAAGGAGAGCCGTATCCAGAA 513
Query 413 --CGA-AAG-TTGCCGG-C-G--G-CGGAGGCGAGGGG-CAATCGGCAGGCAAGTTCACC 462
||| || ||| || | | | || |||| |||| | |||||| ||||| |||||
Sbjct 514 TTCGATGAGATTG-AGGTCTGAAGTTGGTGGCG-GGGGACCATCGGCTGGCAAATTCACT 571
Query 463 GATAAACAGTATTTGAATATTTTGCAGTCTATGGCTCAAGCTGTTCATGTCTTCGATC-T 521
||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||| |
Sbjct 572 GATAAACAGTATTTGAATATTTTACAGTCGATGGCTCAAGCTGTTCATGCCTTCGATCTT 631
Query 522 AA-ATGGCCAAATTATCTTTTGGAACT-CAATGGCGGAGAAGCTTTATGGATTCTCAGCT 579
|| || | | || ||||||||||| | | |||||||| ||| ||||||| | ||| ||
Sbjct 632 AATAT-G-CGGATAATCTTTTGGAA-TGCTATGGCGGAAAAGGTTTATGGGTACTCTGCA 688
Query 580 TCAGAAGCAC-TGGGGAAGGATCCGATTGATATTCTTGTAGATGTTCAG-GATGCTTCGG 637
||||||||| ||||| || | || ||| || || ||| ||||| || | || ||| |
Sbjct 689 GCAGAAGCACTTGGGG-AGAACCCTATTAATGTTATTGCAGATGATC-GAGACGCTGCCT 746
Query 638 TTGCACA-GAATATCACTCGGCGTTGCAGT-AGTGGAGAGAGTTGGACTGGTGAGTTTCC 695
||||| | | |||| |||| ||||| || |||||||||| |||||||||||||||||
Sbjct 747 TTGCA-ATGGATATTGCTCGACGTTG-TGTCCGTGGAGAGAGCTGGACTGGTGAGTTTCC 804
Query 696 TGTAAAGAACAAAGCTGGAGAGAGGTTTTCAGTTGTGACTACGATG-T-CTCCTTCTTAT 753
||| |||| |||| | || || || ||||||| ||| |||||| || | | ||||| ||
Sbjct 805 TGTCAAGAGCAAATCAGGGGATAGATTTTCAGCTGTCACTACG-TGTTCCCCCTTC-TAC 862
Query 754 GATGATGATGGTTG-TCTTATTGGGATCATATGTATCACAAATGATTCGGCACTC-TTTC 811
|||||||| || || ||| || |||||||| |||||||||| | | |||||| | | ||
Sbjct 863 GATGATGACGG-TGCTCTGATGGGGATCATTTGTATCACAACTAACACGGCAC-CATATC 920
Query 812 -AAGACCCGAGAGGCTCTCCGGCT-AA-GACAAGGAGGGGGCAAGAAGGTGAAACGAGCT 868
|| |||| ||| |||| |||| || | |||| | | |||||||||| |||||||
Sbjct 921 TAA-ACCCAAGAATCTCTTTGGCTAAATTA-AAGGCGCAAG-AAGAAGGTGAGACGAGCT 977
Query 869 TTAGTCGGGTGACTAGTAGTGTTGCATCTAAGCTTGGTCTT-GACTCGA-AAGAGGCGGT 926
|| || | | | |||| |||| ||||| ||||| ||| ||||| | | || || |
Sbjct 978 CTATTCCTGCAAGGAATAGTTTTGCCTCTAAACTTGG-CTTGGACTCCAGAGGA-GCTAT 1035
Query 927 TGTATCAAAACTTGGCCTTGATTCTCAGCAGCCTATACAAGTTGCTATAGCTTC-AAAGA 985
| |||| ||| |||||||||| ||| | ||||||||||||||||||||||| || ||| |
Sbjct 1036 TATATCCAAATTTGGCCTTGACTCTGACCAGCCTATACAAGTTGCTATAGCATCGAAA-A 1094
Query 986 TATCAGATTTGG--T-----G-G-GCAACAAGGTCAAGTCGAAAATGCGAGCAGGTGATA 1036
| |||||||||| | | | |||||||| ||| |||||||||||||||||||||||
Sbjct 1095 TCTCAGATTTGGCATCCAAGGTGAGCAACAAGATCAGGTCGAAAATGCGAGCAGGTGATA 1154
Query 1037 ATAACGCTG-CAAAC-CT-TGAGGGTGGAAGTGGGGACAGTCATCAATCTGATCAGGGTT 1093
|| | | || || || || |||||||| |||||||| |||||||| || ||||| |||
Sbjct 1155 AT-A-G-TGCCACACTCTCGGAGGGTGGCAGTGGGGATAGTCATCATTCAGATCATGGTG 1211
Query 1094 TCTTTGATGCTGCTTTCGCTGACCGGAGGGAGGATGCAGCAACAAGTGGTG-CTGATACA 1152
|||| | ||| || || |||||| | ||| ||||||||| ||||||||| | | |||
Sbjct 1212 TCTTCGGGGCTACTCTCACTGACCACAAGGACGATGCAGCATCAAGTGGTGCCAG-CACA 1270
Query 1153 CCTAGGGGGGATTTTATCCAATCTCCTTTTGGTGTATTCTTACGTAGCGATGAGAAAGCT 1212
|| || ||||||||| |||| |||||||||||||||||| | ||| ||||| ||| |
Sbjct 1271 CCAAGAGGGGATTTTCTCCAGTCTCCTTTTGGTGTATTCACATGTAATGATGA-CAAGTT 1329
Query 1213 T-CTAC-AAAGCCCTTCAGAGATTCCAGTGATGAAAGTGATGGAAA-CTCTGTTGTACC- 1268
| | | ||| ||||||| ||||||||||||||| ||||||||||| | ||| | ||
Sbjct 1330 TGTTTCGAAA-CCCTTCAAAGATTCCAGTGATGAGAGTGATGGAAAGC-CTGCAAT-CCA 1386
Query 1269 TAAAACACTGACCTCAAAAGCTGAAGAGTGGATGGTAAAGAAAGGATTATCATGGCCATG 1328
||| || ||||||||||| ||||||||||||||||||||||| || |||||||||||
Sbjct 1387 TAAGGTTCTCACCTCAAAAGCGGAAGAGTGGATGGTAAAGAAAGGTTTGTCATGGCCATG 1446
Query 1329 GAAAGGGAATGA-AAGGGAAGGTTTGGAAGGAAGGCGTAGTCATTCTGTGTGGCCTTGGG 1387
|||||||||||| | |||||||| ||||||| | || ||||||| ||||||||||
Sbjct 1447 GAAAGGGAATGAGCA-GGAAGGTTCAAAAGGAAGACCTACAAATTCTGTATGGCCTTGGG 1505
Query 1388 TGCGGAATGAACAACAAAAACAACAGG-CTTATCAAAGCAATTCTAATCAC-AGTGTTAA 1445
| | ||||| |||| | ||| | ||| || | || | ||| | | | |||||||
Sbjct 1506 TACAGAATGCACAAGAGAAA-GAGAGGTCTCACCAGATTAATCCCGCT-GCTGGTGTTAA 1563
Query 1446 GTCTGAAAGCCAGGCATGTGAAAGTATTAAGGCT-TCCAGTAACGAGCCTATGGGGTAT- 1503
|||||||||||| || | |||||||| |||| || | || ||| ||| || | || |
Sbjct 1564 GTCTGAAAGCCATGCCTTTGAAAGTAATAAGCCTAT-CAATAATGAGGCT-TCTTGTTTG 1621
Query 1504 TGGTCTTCCTCTGTTAATGTGAACAGCACAAGCAGTAG-TAGCAGCTGTGGAAGTACCAG 1562
|||||||||||| | |||| ||||| |||||||| | ||| ||||| |||||||||||
Sbjct 1622 TGGTCTTCCTCTATAAATGCAAACAGTACAAGCAG-CGCTAGTAGCTGCGGAAGTACCAG 1680
Query 1563 CAGCAGTGTTATGAACAAGGTCGATA-TGGATAGTGACTGCTTGGATTATGAAATCTTAT 1621
||||||||||||||||||||| |||| || |||| || ||||||| |||||||| ||||
Sbjct 1681 CAGCAGTGTTATGAACAAGGTTGATACTG-ATAGCGAAGGCTTGGAATATGAAATTTTAT 1739
Query 1622 GGGAAGATTTGACAATTGGAGAACAAATCGGGCAAGGTTCATGTGGAACTGTCTATCACG 1681
|||| ||||||||||||||||||||| |||| |||||||||||||||||||| |||||||
Sbjct 1740 GGGATGATTTGACAATTGGAGAACAAGTCGGACAAGGTTCATGTGGAACTGTTTATCACG 1799
Query 1682 GTCTATGGTTTGGATCCGATGTGGCTGTAAAGGTGTTTTCCAAACAAGAATATTCAGAAG 1741
|||| ||||||||||| ||||| |||||||| ||||| ||||||||||||||||||| ||
Sbjct 1800 GTCTCTGGTTTGGATCTGATGTAGCTGTAAAAGTGTTCTCCAAACAAGAATATTCAGCAG 1859
Query 1742 AGATCATA-ACATCTTTTAGACAAGAGGTATCGTTGATGAAAAGACTTAGACATCCTAAC 1800
|| ||||| | |||||||| ||||||||||| ||||||||||||||||||||| ||||||
Sbjct 1860 AGGTCATAGA-ATCTTTTAAACAAGAGGTATTGTTGATGAAAAGACTTAGACACCCTAAC 1918
Query 1801 GTTTTACTGTTTATGGGAGCCGTGACATCACCTCAGCGTCTCTGTATAGTGACAGAGTTC 1860
|| | |||||||||||||| ||||| |||||||| || |||||||||||| | ||||||
Sbjct 1919 GTCCTGCTGTTTATGGGAGCTGTGACTTCACCTCATCGCCTCTGTATAGTGTCGGAGTTC 1978
Query 1861 CTTCCACG 1868
||||||||
Sbjct 1979 CTTCCACG 1986
> Ahg477972 jgi|Araly1|477972|fgenesh2_kg.3__673__AT3G06640.1
Length=2278
Score = 798 bits (432), Expect = 0.0
Identities = 1132/1455 (78%), Gaps = 107/1455 (7%)
Strand=Plus/Plus
Query 454 AAGTTCACCGATAAACAGTATTTGAATATTTTGCAGTCTATGGCTCAAGCTGTTCATGTC 513
|||||||| |||||||||||| | |||||||||||||| ||||| ||| ||||||||| |
Sbjct 178 AAGTTCACTGATAAACAGTATCTCAATATTTTGCAGTCCATGGCACAATCTGTTCATGCC 237
Query 514 TTCGATCT-AA-ATGGCCAAATTATCTTTTGGAACT-CAATGGCGGAGAAGCTTTATGGA 570
|||||||| || || | | ||||||||||||||| | | |||||||| ||| |||||||
Sbjct 238 TTCGATCTCAATAT-G-CGAATTATCTTTTGGAA-TGCTATGGCGGAAAAGGTTTATGGG 294
Query 571 TTCTCAGCTTCAGAAGCACTGGGGAAGGATCCGATTGATATTCTTGTAGATGTTCAGGAT 630
| ||| ||| |||||||| | ||| || | || ||||| | | ||||||| || ||||
Sbjct 295 TACTCTGCTGCAGAAGCAGTTGGGCAGAACCCAATTGACGTAATGGTAGATGATCGGGAT 354
Query 631 GCTTCGGTTGCACA-GAATATCACTCGGCGTTGCAGTAGTGGAGAGAGTTGGACTGGTGA 689
|| | ||||| | |||||| ||| | ||| | |||||||| |||||||| |
Sbjct 355 GCCCCCTTTGCA-ATGAATATTGCTCAACTTTGTTCCAATGGAGAGACCTGGACTGGCAA 413
Query 690 GTTTCCTGTAAAGAACA-AAGCTGGAGAGAGGTTTTCAGTTGTGACTACGATG-T-CTCC 746
||||||||| |||| || || ||||||||| ||||||||||| ||||| ||| | | ||
Sbjct 414 GTTTCCTGTCAAGAGCAGAA-CTGGAGAGAAATTTTCAGTTGTCACTAC-ATGTTCCCCC 471
Query 747 TTCTTATGATGATGATGGTTGTCTTATTGGGATCATATGTATCACAAATGATTCG--GCA 804
||| |||| |||||| |||| |||||||||||| | | | |||||| ||| || |||
Sbjct 472 TTC-TATGCTGATGACGGTTCCCTTATTGGGATCGTTTCTGTCACAAGTGA--CGTAGCA 528
Query 805 C--TCTTTCAAGACCCGAGAGGCTCTCCGGCTAAGA-CAAGGAGGGGGCAAGAAGGTGAA 861
| | | || | |||||||| |||| |||| | | || ||| | | ||||| ||||
Sbjct 529 CAGTATCTC-A-ACCCGAGAATCTCTTTGGCT-ACATTAA--AGGCGTC-AGAAGTTGAA 582
Query 862 ACGAGCTTTAGTCGGGTGA-CTAGTAGTGTTGCATCTAAGCTTGGTCTT-GACT-CGAAA 918
||||||| || | | | | | |||| |||| | ||| |||||| || |||| | |||
Sbjct 583 ACGAGCTCAAGCCCTGCAAGC-AATAGTTTTGCCTTTAAACTTGGT-TTGGACTCCAAAA 640
Query 919 GAGGCGGTTGTATCAAAACTTGGCCTTGATTCTCAGCAGCCTATACAAGTTGCTATAGCT 978
|| || |||||||| ||| |||||||||||||| | ||||||||||||||||||||||||
Sbjct 641 GA-GCTGTTGTATCCAAATTTGGCCTTGATTCTGATCAGCCTATACAAGTTGCTATAGCT 699
Query 979 TCAAAGATATCAGATTTGG--T----GG-GC-AA-CAAGGTCAAGTCGAAAATGCGAGCA 1029
||||||||||||||||||| | || | || |||||||| ||||||||||| ||||
Sbjct 700 TCAAAGATATCAGATTTGGCATCTAAGGTGAGAAACAAGGTCAGGTCGAAAATGCCAGCA 759
Query 1030 GGTGATAATAACGCTGCAAACC-T-TGAGGGTGGAAGTGGGGACAGTCATCAATCTGATC 1087
||||||| || | | || | | ||||||||| |||||||| |||||||| || ||||
Sbjct 760 GGTGATAGTAGTG-T-CACAGTGTCTGAGGGTGGCAGTGGGGATAGTCATCATTCAGATC 817
Query 1088 AGGGTTTCTTTGATGCTGCTTTCGCTGACCGGAGGGAGGATGCAGCAACAAGTGGTGCTG 1147
| ||| |||| | |||| || || |||||| ||||| ||||||||| ||||
Sbjct 818 ATGGTGTCTTCGGTGCTACTCTCTCTGACCACAGGGACGATGCAGCACCAAG-------- 869
Query 1148 ATACACCTAGGGGGGATTTTATCCAATCTCCTTTTGGTGTATTCTTACGTAGCGATGAGA 1207
| |||| |||||||||| |||||||||||||||||| | ||| |||||| |
Sbjct 870 A--------GGGG--ATTTTATCCAGTCTCCTTTTGGTGTATTCACATGTAACGATGACA 919
Query 1208 AAGCTTCTA-C-AAAGCCCTTCAGAGATTCCAGTGATG-AAAGTGATGGAAACTCTGTTG 1264
| | || | | ||| ||||||| |||||||||||||| |||| || || | || ||
Sbjct 920 A-GTTTGTTTCGAAA-CCCTTCAAAGATTCCAGTGATGGAAAGCC-TGTAACC-CT-TT- 973
Query 1265 TACCTAAAACACTGACCTCAAAAGCTGAAGAGTGGATGGTAAAGAAAGGATTATCATGGC 1324
| | | | || | |||||||||||| ||||||||||||||||| || || | ||
Sbjct 974 T-C--A---C-CT--C---AAAAGCTGAAGAATGGATGGTAAAGAAAGGTTTGTCGTTGC 1021
Query 1325 CATGGAAAGGGAATGAA-AGGGAAGGTTTGGAAG-G-AAGGCGTAGTCATTCTGTGTGGC 1381
|||||||||||| ||| ||| |||||| ||| | || || | ||||||||| ||||
Sbjct 1022 CATGGAAAGGGACTGAGCAGG-AAGGTTC--AAGAGTAAAGCCTTCTCATTCTGTATGGC 1078
Query 1382 CTTGGGTGCGGAATGAACAACAA-AAACA-ACAGGCTTATCAAAGCAATTC-TAATCACA 1438
|||| || | ||||||| || || ||| | | || || | || | |||| | | ||
Sbjct 1079 CTTGTGTACAGAATGAAAAA-AAGAAAGATA-AGTCTCACCAGATCAATCCCTCTTCTG- 1135
Query 1439 GTGTTAAGTCTGAAAGCCAGGCATGTGAAAGTATTAAGGCTTCCAGTAACGAGCCTATGG 1498
||||||||||| ||||||| || | |||||||| |||| || ||| |||| || || |
Sbjct 1136 GTGTTAAGTCTAAAAGCCATGCCTCTGAAAGTAATAAGCCTACCAATAACAAGGCT-TCT 1194
Query 1499 GGTATTG-G-TCTTCCTCTGT-TAATGTGAACAGCACAAGCAGTAGTAGCAGCTGTGGAA 1555
|| | | | ||| ||| | | || |||||||||||||||||| ||| ||| || ||
Sbjct 1195 AGT-TCGCGGTCTGCCTATATATA-TGTGAACAGCACAAGCAGCCCTAGTAGCCGTAAAA 1252
Query 1556 GTACCAGC-AGCAGTGTTATGAACAAGGTCGATATGGATAGTGACTGCTTGGATTATGAA 1614
|| |||| | ||||||||||| |||||| |||| ||||| | |||||||| ||||||
Sbjct 1253 CTATCAGCTA-CAGTGTTATGAGCAAGGTGGATACATATAGTAATTGCTTGGAGTATGAA 1311
Query 1615 ATCTTATGGGAAGATTTGACAATTGGAGAACAAATCGGGCAAGGTTCATGTGGAACTGTC 1674
|| |||||||| ||||||||||| ||||||||||| || ||||| |||||||||||||||
Sbjct 1312 ATTTTATGGGATGATTTGACAATCGGAGAACAAATTGGACAAGGCTCATGTGGAACTGTC 1371
Query 1675 TATCACGGTCTATGGTTTGGATCCGATGTGGCTGTAAAGGTGTTTTCCAAACAAGAATAT 1734
||||||||||| ||||||||||| ||||| |||||||| ||| | ||||||||||||||
Sbjct 1372 TATCACGGTCTGTGGTTTGGATCTGATGTAGCTGTAAAAGTGATCCCCAAACAAGAATAT 1431
Query 1735 TCAGAAGAGATCATAACA-TCTTTTAGACAAGAGGTATCGTTGATGAAAAGACTTAGACA 1793
||||||||| ||||| || || |||||||||||||||||| ||||||||||||| || ||
Sbjct 1432 TCAGAAGAGGTCATA-CAATCATTTAGACAAGAGGTATCGCTGATGAAAAGACTCAGGCA 1490
Query 1794 TCCTAACGTTTTACTGTTTATGGGAGCCGTGACATCACCTCAGCGTCTCTGTATAGTGAC 1853
|||||||||| | |||||||||||||| ||||| | ||||||| |||||||||||||| |
Sbjct 1491 TCCTAACGTTCTGCTGTTTATGGGAGCAGTGACTTTACCTCAGGGTCTCTGTATAGTGTC 1550
Query 1854 AGAGTTCCTTCCACG 1868
||| |||||||||||
Sbjct 1551 AGAATTCCTTCCACG 1565
> Ahg903543 jgi|Araly1|903543|Al_scaffold_0003_671
Length=2076
Score = 510 bits (276), Expect = 2e-143
Identities = 622/781 (80%), Gaps = 55/781 (7%)
Strand=Plus/Plus
Query 1111 GCTGACCGGAGGGAGGATGCAGCAACAAGTGGTG-CTGATACACCTAGGGGGGATTTTAT 1169
||||||| | ||| ||||||||| ||||||||| | | ||| |||| | |||||||||
Sbjct 703 GCTGACCACATGGACGATGCAGCATCAAGTGGTGCCAG-CACATCTAGAGAGGATTTTAT 761
Query 1170 CCAATCTCCTTTTGGTGTATTCTTACGTAGCGATGAGAAAGCTT-CTACAAAGCCCTTCA 1228
||| |||||||||||| ||||| | ||| |||||| ||| || || |||| |||||||
Sbjct 762 CCAGTCTCCTTTTGGTATATTCACATGTAACGATGA-CAAGTTTCCTTCAAAACCCTTCA 820
Query 1229 GAGATTCCAGTGATGAAAGTGATGGAAA-CTCTGTTGTACCTA-AA-ACACTGACCTCAA 1285
|||||||||| |||| |||||| |||| | ||| | || | || | |||||||
Sbjct 821 AAGATTCCAGTAATGAGAGTGATAGAAAGC-CTGCAAT-CC-AGAAGGTTCCCACCTCAA 877
Query 1286 AAGCTGAAGAGTGGATGGTAAAGAAAGGA-TTATCATGGCCATGGAAAGGGAATGAA-AG 1343
|||||||||| ||||||||||||||| || || ||| |||||||||||||||||||| |
Sbjct 878 AAGCTGAAGAATGGATGGTAAAGAAA-GATTTGTCACGGCCATGGAAAGGGAATGAACA- 935
Query 1344 GGAAGGTT-TGGAAGGAAGGCGTAGTCATTCTGTGTGGCCTTGGGTGCGGAATGAACAAC 1402
|||||||| || || || || || ||||||| | |||||||| || | ||||||||||
Sbjct 936 GGAAGGTTCAGG-AGTAAAGCCTACTCATTCTCTATGGCCTTGTGTACAGAATGAACAA- 993
Query 1403 AA-AAA-CAACAGGCTTATCAAAGCAATTCTAATC-AC-AGTGTTAAGTCTGAAAGCCA- 1457
|| ||| | || || | || | ||| || ||| | || ||||||||||||||||
Sbjct 994 AAGAAAGGTA-AGTCTCACCAGATCAA-TC-CATCTTCTGGTATTAAGTCTGAAAGCCAT 1050
Query 1458 GGCATGTGAAAGTATTAAGGCTTC-CA-G-TAACG-AGCCTATGGGGTAT-TGGTCTTCC 1512
| | | |||||||| |||| || | | | | ||| || || | |||| |||||||||
Sbjct 1051 GAC-TCTGAAAGTAATAAGCCTACTGATGATGACGAAG-CT-TCTAGTATGTGGTCTTCC 1107
Query 1513 TCTGTTAATGTGAACAGCACAAGCAGTAGTAGCAGCTGTGGAAGTACCAGCAGCAGTGTT 1572
||| | |||| |||| | ||| | |||||| ||||||||||| || ||||||
Sbjct 1108 TCTATAAATGCGAAC-G-----GCA-CA--AGCAGC---GGAAGTACCAGTAGGAGTGTT 1155
Query 1573 ATGAACAAGGTCGAT-ATGGATAG-TGACT-GCTTGGATTATGAAATCTTATGGGAAGAT 1629
||| ||||| | | | | || ||| | | | |||||| |||||||| |||||||| ||
Sbjct 1156 ATGGACAAGATTGCTAAAGG-TAGCT-A-TCACTTGGAATATGAAATTTTATGGGATCAT 1212
Query 1630 TTGACAATTG-GAGAACAAATCGGGCAAGGTTCATGTGGAACTGTCTATCACGGTCTATG 1688
|||||||| | | |||||||| || |||||||||||||||||||||||||||||||| ||
Sbjct 1213 TTGACAATCGCG-GAACAAATTGGACAAGGTTCATGTGGAACTGTCTATCACGGTCTCTG 1271
Query 1689 GTTTGGATCCGATGTGGCTGT-AAAGGTGTTTTCCAAACAAGAATATTCAGAAGAGATCA 1747
||||||||| ||||| ||||| |||| |||| |||||||||||||||||||||| |||||
Sbjct 1272 GTTTGGATCTGATGTAGCTGTGAAAG-TGTTCTCCAAACAAGAATATTCAGAAGCGATCA 1330
Query 1748 TAACATCTTTTAGACAAGAGGTATCGTTGATGAAAAGACTTAGACATCCTAACGTTTTAC 1807
||| |||||||| ||||||||||||| ||||||||||||| || ||||||||||| | |
Sbjct 1331 TAAAATCTTTTAAACAAGAGGTATCGCTGATGAAAAGACTCAGGCATCCTAACGTCCTGC 1390
Query 1808 TGTTTATGGGAGCCGTGACATCACCTCAGCGTCTCTGTATAGTGACAGAGTTCCTTCCAC 1867
||||||||||||| ||||| ||||| |||| ||||||||||||| |||||||| ||||||
Sbjct 1391 TGTTTATGGGAGCTGTGACTTCACCCCAGCATCTCTGTATAGTGTCAGAGTTCGTTCCAC 1450
Query 1868 G 1868
|
Sbjct 1451 G 1451
Score = 392 bits (212), Expect = 7e-108
Identities = 335/395 (85%), Gaps = 6/395 (2%)
Strand=Plus/Plus
Query 2140 GCTCGTGGCATGAATTATCTTCACCATTGTACTCCACCGATCATTCACCGAGATTTGAAG 2199
||||| || ||||||||||||||| ||||| | |||| ||||| || || ||| |||||
Sbjct 1531 GCTCGCGGTATGAATTATCTTCACTGTTGTAGTTCACCCATCATCCATCGTGATCTGAAG 1590
Query 2200 TCATCAAATCTACTGGTTGATAAAAACTGGACCGTGAAGGTTGCTGACTTTGGTCTTTCG 2259
|| |||||||| ||||| || | ||||||||||| ||||| ||||||||||||||||||
Sbjct 1591 TCGTCAAATCTTCTGGTAGACAGGAACTGGACCGTTAAGGTAGCTGACTTTGGTCTTTCG 1650
Query 2260 CGTATCAAGCATGAGACGTACCTCACTA-CAAAGACAGGAAGGGGAACGCCTCAATGGAT 2318
|||||||||||| |||| ||||| || | ||| | | |||| ||||||||||||||||||
Sbjct 1651 CGTATCAAGCATCAGACATACCTAACCAGCAA-GTCGGGAAAGGGAACGCCTCAATGGAT 1709
Query 2319 GGCACCGGAAGTTCTCCGAAATGAGGCTGCTGATGAAAAGTCTGACGTTTACAGCTTTGG 2378
|||||| |||||||| ||||||||| |||||||||| ||||||||| |||||||||||||
Sbjct 1710 GGCACCAGAAGTTCTTCGAAATGAGTCTGCTGATGAGAAGTCTGACATTTACAGCTTTGG 1769
Query 2379 AGTAATACTATGGGAGCTGGTGACTGAGAAGATCCCGTGGGAAAGTCTAAA-TGCTATGC 2437
|||| ||||||||||||| | || ||||||||||| ||||||| ||| || | | ||||
Sbjct 1770 AGTAGTACTATGGGAGCTTGCCACAGAGAAGATCCCTTGGGAAAATCTCAACT-CGATGC 1828
Query 2438 AGGTGATTGGAGCTGTAGGGTTCATGAACCAGAGACTGGAAGTCCCGAAAA-ATGTTGAT 2496
||||||| |||||||| ||||||||||||||||| |||||| | || ||| | |||||
Sbjct 1829 AGGTGATCGGAGCTGTGGGGTTCATGAACCAGAGGCTGGAAATTCC-AAAGGACATTGAT 1887
Query 2497 CCTCAGTGGATTTCTTTAATGGAAAGCTGCTGGCA 2531
||| | ||||| || ||||| || |||||||||||
Sbjct 1888 CCTGATTGGATCTCATTAATAGAGAGCTGCTGGCA 1922
Score = 233 bits (126), Expect = 5e-60
Identities = 280/353 (79%), Gaps = 16/353 (5%)
Strand=Plus/Plus
Query 454 AAGTTCACCGATAAACAGTATTTGAATATTTTGCAGTC-TATGGCTCAAGCTGTTCATGT 512
|||||||| ||||||||||||||||||||||||||||| | |||||||| ||||||||||
Sbjct 154 AAGTTCACTGATAAACAGTATTTGAATATTTTGCAGTCGT-TGGCTCAATCTGTTCATGT 212
Query 513 CTTCGATCTAAATGGC-CAAATTATCTTTTGGAACT-CAATGGCGGAGAAGCTTTATGGA 570
||| ||||| ||| | | ||||||||||||||| | | ||| |||| ||||| |||||
Sbjct 213 CTTAGATCTCAATA-CACGAATTATCTTTTGGAA-TGCCATGTCGGAAAAGCTGTATGGG 270
Query 571 TTCTCAGCTTCAGAAGCACTGGGGAAGGATCC-GATTGATATTCTTGTAGATGTTCAGGA 629
| ||| ||| |||||| | | |||||| | || | || || || ||||||||| |||| |
Sbjct 271 TACTCTGCTGCAGAAGTAGTTGGGAAGAACCCAG-TTCATGTTATTGTAGATGATCAGAA 329
Query 630 TGCTTCGGTTGCACA-GAATATCACTCGGCGTTGCAGT-AGTGGAGAGAGTTGGACTGGT 687
|||| | |||| | |||| | |||| |||||| || | ||||||||| |||||||||
Sbjct 330 TGCTGCCTTTGC-CTTGAATGTTGCTCGACGTTGC-GTCAATGGAGAGAGCTGGACTGGT 387
Query 688 GAGTTTCCTGTAAAGAACAAAGCTGGAGAGAGGTTTTCAGTTGTGACTACGATGT-CTCC 746
||||||||||| |||| |||| | || | | ||||||| ||| |||||| ||| | ||
Sbjct 388 GAGTTTCCTGTCAAGACCAAATCAGGGGTCATCTTTTCAGCTGTCACTACG-TGTTCCCC 446
Query 747 -TTCTTATGATGATGATGGTTGTCTTATTGGGATCATATGTATCACAAATGAT 798
|| |||||||||| | || | || |||| ||||| | |||||||| ||||
Sbjct 447 CTT-TTATGATGATAACGGCACTATTCTTGGTATCATTTCTATCACAAGTGAT 498
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 113966013040
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5