BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G49780.1
Length=2732
Score E
Sequences producing significant alignments: (Bits) Value
Ahg916571 jgi|Araly1|916571|Al_scaffold_0008_1322 1485 0.0
Ahg495036 jgi|Araly1|495036|fgenesh2_kg.8__852__AT5G49760.1 994 0.0
Ahg495037 jgi|Araly1|495037|fgenesh2_kg.8__853__AT5G49770.1 870 0.0
Ahg495035 jgi|Araly1|495035|fgenesh2_kg.8__851__AT5G49750.1 693 0.0
> Ahg916571 jgi|Araly1|916571|Al_scaffold_0008_1322
Length=2904
Score = 1485 bits (804), Expect = 0.0
Identities = 988/1075 (92%), Gaps = 20/1075 (2%)
Strand=Plus/Plus
Query 1662 GCCAAGTGGGATGCGAATCAGAACAGTGTCGATGCACCACAGCTT-ATGGGAACAAAAGC 1720
||||||||||||| ||||||||||||||||||||| |||||| || ||||||||||||||
Sbjct 1846 GCCAAGTGGGATGTGAATCAGAACAGTGTCGATGCTCCACAG-TTAATGGGAACAAAAGC 1904
Query 1721 ATTTACTTTTGAAGAGATGAGGAAATGTGCAAACAACTTTTCAGTGGCAAATGATGTCGG 1780
||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||
Sbjct 1905 ATTTACTTTTGAAGAGATGAGGAAATGCGCAAACAACTTTTCGGTGGCAAATGATGTTGG 1964
Query 1781 TGGTGGAGGTTATGGCCAA-GTATACAAAGGGATTCTTCCTTCTGGTCAACTCATAGCAA 1839
||||||||||||||| ||| || |||| ||||||||||||| ||| |||||||||||||
Sbjct 1965 TGGTGGAGGTTATGG-CAAGGTGTACAGAGGGATTCTTCCTAATGGGCAACTCATAGCAA 2023
Query 1840 TTAAAAGAGCTCAACCAGGATCTTTGCAAGGAGCGTTGGAGTTTAAAACTGAGATCGAGC 1899
||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2024 TTAAAAGGGCTCAACAAGGATCTTTGCAAGGAGCGTTGGAGTTTAAAACTGAGATCGAGC 2083
Query 1900 TTCTTTCAAGGGTCCATCATAAAAATGTTGTCAAACTCTTAGGCTTTTGCTTTGATCGAG 1959
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2084 TTCTTTCAAGAGTCCATCATAAGAATGTTGTCAAACTCTTAGGCTTTTGCTTTGATCGAG 2143
Query 1960 GAGAACAAATGCTCGTCTACGAGTATATTCCAAATGGTTCTCTTAGAGATAGTCTATCAG 2019
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2144 GAGAACAAATGCTCGTATACGAGTACATTCCAAATGGTTCTCTTAGAGATAGTCTATCAG 2203
Query 2020 GGAAAAGTGGGATTAGACTTGATTGGACGAGAAGGCTTAGAATAGCACTTGGTTCAGGGA 2079
|||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 2204 GGAAAAGTGGGATTAGACTTGATTGGACAAGAAGGCTTAGAATAGCACTTGGATCAGGGA 2263
Query 2080 AGGGTTTGGCTTATCTTCATGAGCTTGCAGATCCTCCAATTATACACAGAGACGTTAAAT 2139
|||| ||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||
Sbjct 2264 AGGGCTTGGCTTATCTTCATGAACTTGCTGATCCTCCAATTATACACAGAGACGTCAAAT 2323
Query 2140 CAAGTAATGTATTACTTGATGAAAGTTTAACTGCAAAAGTTGCTGATTTTGGCTTATCTC 2199
|||||||| |||||||||| ||| || ||| |||||||||||||||||||||| |||| |
Sbjct 2324 CAAGTAATATATTACTTGACGAACGTCTAAATGCAAAAGTTGCTGATTTTGGCCTATCCC 2383
Query 2200 AACTTGTGGAAGATGCTGAGAAAGCTAATGTAACGGCACAAGTGAAGGGAACTATGGGCT 2259
|||||||||||||||| ||||||||||||||||| |||||||| |||||||| |||||||
Sbjct 2384 AACTTGTGGAAGATGCAGAGAAAGCTAATGTAACAGCACAAGTTAAGGGAACCATGGGCT 2443
Query 2260 A-CTTGGATCCTGAGTACTACATGACGAATCAATTGACAGAGAAGAGCGATGTATATGGG 2318
| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2444 ATCTTG-ATCCTGAGTACTACATGACGAATCAATTGACAGAGAAGAGCGATGTGTATGGT 2502
Query 2319 TTTGGGGTTATGATGCTTGAGCTACTGACTGGTAAGATTCCTATAGAGAATGGAAAATAT 2378
||||||||| ||||||||||||| | || ||||||||||| ||||||||||||||||||
Sbjct 2503 TTTGGGGTTGTGATGCTTGAGCTGTTAACCGGTAAGATTCCGATAGAGAATGGAAAATAT 2562
Query 2379 GTGGTGAAAGAGATGAAGATGAAGATGAATAAATCGAAGAACTTGTATGACCTACAAGAT 2438
|||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct 2563 GTGGTGAAAGAGATGAAGATGAAGATGAATAAATCGAAAAACTTGTATGACTTACAAGAA 2622
Query 2439 TT-TCTGGACACTACGATCAGCGCAACGTCCAACAGGAATCTTAAGGGATTTGAAAAGTA 2497
|| | |||||||| | || ||| || | ||| || |||||| || ||||||||||||||
Sbjct 2623 TTGT-TGGACACTTCCATTAGCACA--G-CCAGCAAGAATCTCAAAGGATTTGAAAAGTA 2678
Query 2498 TGTAGATGTGGCTCTAAGATGCGTAGATCCAGAAGGAGTGAAGAGGCCATCAATGAATGA 2557
||||||| | ||| ||||||| || |||||||||||||||||||||||||||||||||||
Sbjct 2679 TGTAGATCTTGCTTTAAGATGTGTGGATCCAGAAGGAGTGAAGAGGCCATCAATGAATGA 2738
Query 2558 GGTTGTGAAAGAGATTGAGAACATAATGCAGTATGCAGGATTAAACCCTAACGTAGAATC 2617
|| |||||||||||||||||||||||||||| ||||||||||| ||||| ||
Sbjct 2739 GGCTGTGAAAGAGATTGAGAACATAATGCAGCATGCAGGATTA---------GTAGATTC 2789
Query 2618 ATATGCGAGTTCAAGAACGTATGATGAAGCAAGCAAAGAATCTGGAGATCTTTATGGAAA 2677
|| |||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||
Sbjct 2790 ATCTGCGAGTTCAAGAACGTATGATGAAGAAAGCAAAGGATCTGGGGATCTTTATGGAAA 2849
Query 2678 CAACTCTTTTGAGTATAGTGCAAGTTTCCCAACTACAAACCTCGAACCTCAATGA 2732
|||||||||||||||||||||||||||||||||| |||| |||||||| ||||||
Sbjct 2850 CAACTCTTTTGAGTATAGTGCAAGTTTCCCAACTGCAAATCTCGAACCCCAATGA 2904
Score = 1075 bits (582), Expect = 0.0
Identities = 768/855 (90%), Gaps = 23/855 (3%)
Strand=Plus/Plus
Query 750 ACATTAAGGATGGCAGGGCTCCAACTTCAAGGTCCAATACCAACCTCCCTCTTCAGT-CT 808
||||||||||||| |||||||||||||||||||||||||||||||||||| |||| | |
Sbjct 1003 ACATTAAGGATGGAAGGGCTCCAACTTCAAGGTCCAATACCAACCTCCCTATTCA-TCCC 1061
Query 809 TCCTGAATTGCAGACTGTTATCCTAAAGCGTAACTGGCTAAACGAAACACTAGACTTCGG 868
|||| | |||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 1062 TCCTCAGTTGCAGACTGTTATCCTAAAGCGTAACTGGCTAAACGAAACATTGGACTTCGG 1121
Query 869 TACCAACAAGAGCCAA-AACCTAGATTTTGTGGATTTACAATATAATGACATAACAGAGT 927
||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||
Sbjct 1122 TACCAACAAGAGCCAGCAAT-TAGATTTTGTGGATTTACAATATAATGACATAACTGAGT 1180
Query 928 ATATTAAACAACCAGCT-AATAAAGGAAGCAGCAGGATAGTAATCTTGGCAAATAATCCA 986
||| || ||| ||| | |||||||| |||||||||||||||||||||||||||||||||
Sbjct 1181 ATA--AA-CAATCAG-TGAATAAAGGCAGCAGCAGGATAGTAATCTTGGCAAATAATCCA 1236
Query 987 GTGTGCCCCGAGGTAGGGAACCCACCAAATGAATACTGCATAGAAGTCGAACACAATTCC 1046
||||| ||||||||||||||||||||| |||||||||||| || |||| ||||||||||
Sbjct 1237 GTGTGTCCCGAGGTAGGGAACCCACCAGATGAATACTGCAAAGTAGTCAAACACAATTCT 1296
Query 1047 TCATATTCTTC-CC-CTAAGAACACATGTGGTCGTT-GTAGTGGTGAGGACAGGGAACCC 1103
||||||||||| || |||| | |||||||||| ||| || ||| |||||||| ||||||
Sbjct 1297 TCATATTCTTCTCCTCTAA-A-CACATGTGGT-GTTTGTGGTGATGAGGACATGGAACCG 1353
Query 1104 ATTCCCACCACGTGCCGTTGTGTGTATCCAATCACAGGAACACTCACTTTTAGGTCACCT 1163
| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 1354 ACTCCCACCACGTGTCGTTGTGTGTATCCAATCACAGGAACACTCACTTTCAGGTCGCCT 1413
Query 1164 TCCTTCTCAGGGTATTCCAACAACGATACATTCGAGAACCTCAGGCTAAACCTAACTGGT 1223
|||||||||||||||||||||||| | || ||||||| |||||||||||| |||| | |
Sbjct 1414 TCCTTCTCAGGGTATTCCAACAACAACACCTTCGAGATGCTCAGGCTAAACTTAACAGAT 1473
Query 1224 TTCTTTGAGAATAGAAA-TTATACA-GTGGATTCTGTGGCCATAAGAAACATAAGAGAAG 1281
|||||| | || | ||| |||| || || ||||| ||||||||||||||||| ||||| |
Sbjct 1474 TTCTTTAACAAGA-AAAGTTAT-CAAGTAGATTCAGTGGCCATAAGAAACATCAGAGAGG 1531
Query 1282 ATGAAGATGATCATTATCTTCTAATAGATCTCTCTCTCTTTCCATATAAA-CAAGACAGA 1340
||||| |||||||||||||||||||||||||||| |||||||||||||| || || |||
Sbjct 1532 ATGAAAATGATCATTATCTTCTAATAGATCTCTCGGTCTTTCCATATAAAACA-GAGAGA 1590
Query 1341 TTTAATGAGACGGGAATG-GATAGTGTTATTTCCAGGTTTAGCACACAGACTTATAAGCC 1399
|||||||||||||||||| | |||||||||||||||||||||||| ||||||||||| ||
Sbjct 1591 TTTAATGAGACGGGAATGAG-TAGTGTTATTTCCAGGTTTAGCACGCAGACTTATAAACC 1649
Query 1400 TCCTAATACCTTTGGCCCTTACATATTCAAAGCCAATAAGTACAATAAGTTCCCTGCAGG 1459
|||| | ||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 1650 TCCTCCGATGTTTGGCCCTTACATATTCAAAGCCAATGAGTACAATAAGTTCCCTACAGG 1709
Query 1460 AGGTTCAAACTCGTCACACATCATTGGAGCTGTAGTTGGTTCTACTGTTTTTCTGTTAAT 1519
|||||||||||| |||||||||||||||||| || ||||||||| |||||||||||||||
Sbjct 1710 AGGTTCAAACTCATCACACATCATTGGAGCTATACTTGGTTCTAGTGTTTTTCTGTTAAT 1769
Query 1520 TCTAATGATAGCTGGGATCTATGCTCTTAAGCAAAAGAGAAGAGCAGAGAAAGCAAATGA 1579
|||||||||||||||||||||||||||||||||||||| |||||||||| ||| || ||
Sbjct 1770 GCTAATGATAGCTGGGATCTATGCTCTTAAGCAAAAGAGGAGAGCAGAGAGAGCGAACGA 1829
Query 1580 TCAAATTAATCCTTT 1594
||||||||||||||
Sbjct 1830 ACAAATTAATCCTTT 1844
Score = 955 bits (517), Expect = 0.0
Identities = 573/601 (95%), Gaps = 0/601 (0%)
Strand=Plus/Plus
Query 77 GGATTTGACATCTAATCCTAATTTGACCGGACCGCTTCCACTAAATATCGGTAACCTTAA 136
|||||||||||||||||||||||| || ||||||||||||| ||||||||||||||| ||
Sbjct 408 GGATTTGACATCTAATCCTAATTTAACTGGACCGCTTCCACCAAATATCGGTAACCTCAA 467
Query 137 GGAGTTGACGAACTTAAATCTTATGGGATGTGGTTTCAGTGGTCAAATCCCTGAGTCCAT 196
| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 468 GAAGTTGACGAACTTGAATCTTATGGGATGTGGTTTCAGTGGTCAAATCCCTGAGTCCAT 527
Query 197 AGGATCTCTAGAACAACTTGTAACACTCTCCTTGAATTCAAATAAATTTAATGGAACGAT 256
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||
Sbjct 528 AGGATCTCTAGAACAACTTATAACACTCTCCCTGAATTCAAATAAATTTAATGGAACAAT 587
Query 257 TCCGGCTTCCATTGGCCTGTTATCGAAACTATATTGGTTTGATATAGCTGACAATCAGAT 316
||||||||||||||||| |||||| |||||||||||||| |||||||| |||||||||||
Sbjct 588 TCCGGCTTCCATTGGCCAGTTATCAAAACTATATTGGTTCGATATAGCAGACAATCAGAT 647
Query 317 AGAAGGAAAGCTTCCAGTTTCTGATGGGGCTTCTTTACCTGGACTTGATATGCTTCTTCA 376
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 648 AGAAGGAAAGCTTCCAGTTTCTGATGGAGCTTCTTTACCTGGACTTGATATGCTTCTTGA 707
Query 377 AACTAAGCATTTTCATTTTGGAAAAAACAAGCTTTCTGGTGATATCCCTGAAAAGCTATT 436
||||||||||||||||||||| ||||||||||||||||| ||||| || |||||||| ||
Sbjct 708 AACTAAGCATTTTCATTTTGGCAAAAACAAGCTTTCTGGCGATATACCAGAAAAGCTCTT 767
Query 437 CAGTGCCAACATGACTTTAAAACATTTGCTATTCGATGGAAACCTACTAACCGGTGAAAT 496
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 768 CAGTGCCAACATGACTTTAAAACATTTGCTATTCGATGGAAACCTACTCACGGGTGAAAT 827
Query 497 CCCACAAAGCCTCAGCCTTGTTAAAACATTGACGGTGTTACGCCTTGATAGGAATAGACT 556
|||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 828 CCCACAGAGCCTTAGCCTTGTTAAAACGTTGACGGTGTTACGCCTTGATAGGAATAGACT 887
Query 557 AAGTGGAGAAATTCCTCCAAGTCTTAATAATCTCACAAATCTTCAAGAACTGTACTTGTC 616
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 888 AAGTGGAGAAATTCCTGCAAGTCTTAATAATCTCACAAATCTTCAAGAACTGTACTTGTC 947
Query 617 CGACAACAAATTTACCGGTAGTCTTCCAAGTTTAACCAGCTTGACCAGTCTCTCCACATT 676
||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 948 CGACAACAAATTTACAGGTAGTCTTCCAATTTTAACCAGCTTGACCAGTCTCTCCACATT 1007
Query 677 A 677
|
Sbjct 1008 A 1008
> Ahg495036 jgi|Araly1|495036|fgenesh2_kg.8__852__AT5G49760.1
Length=3322
Score = 994 bits (538), Expect = 0.0
Identities = 912/1089 (84%), Gaps = 39/1089 (4%)
Strand=Plus/Plus
Query 1662 GCCAAGTGGGATGCGAA-TCAGAACAGTGTCGATGCACCACAGCTTATGGGAACAAAAGC 1720
|||||||||| | | || | ||| |||| ||||||| ||||| || |||||| |||||||
Sbjct 2106 GCCAAGTGGGGTAC-AAGTAAGAGCAGTATCGATGCTCCACAACTAATGGGAGCAAAAGC 2164
Query 1721 ATTTACTTTTGAAGAGATGAGGAAATGTGCAAACAACTTTTCAGTGGCAAATGATGTCGG 1780
||||||||||| ||| ||| ||||||| || | |||||||||| |||||||||||| ||
Sbjct 2165 GTTTACTTTTGATGAGCTGAAGAAATGTACAGATAACTTTTCAGAGGCAAATGATGTTGG 2224
Query 1781 TGGTGGAGGTTATGGCCAA-GTATACAAAGGGATTCTTCCTTCTGGTCAACTCATAGCAA 1839
|||||||||||||| ||| || |||| ||||||||||||| ||| |||||||||||||
Sbjct 2225 GGGTGGAGGTTATGG-CAAGGTGTACAGAGGGATTCTTCCTAATGGGCAACTCATAGCAA 2283
Query 1840 TTAAAAGAGCTCAACCAGGATCTTTGCAAGGAGCGTTGGAGTTTAAAACTGAGATCGAGC 1899
||||||| ||||||| ||||||||||||||||| ||||||||| ||||||||||| ||||
Sbjct 2284 TTAAAAGGGCTCAACAAGGATCTTTGCAAGGAGGGTTGGAGTTCAAAACTGAGATTGAGC 2343
Query 1900 TTCTTTCAAGGGTCCATCATAAAAATGTTGTCAAACTCTTAGGCTTTTGCTTTGATCGAG 1959
|||||||||||||||||||||| |||||||||| |||||||||||| |||||||| || |
Sbjct 2344 TTCTTTCAAGGGTCCATCATAAGAATGTTGTCAGACTCTTAGGCTTCTGCTTTGACCG-G 2402
Query 1960 GA-GAACAAATGCTCGTCTACGAGTATATTCCAAATGGTTCTCTTAGAGATAGTCTATCA 2018
| |||||||||||||| |||||||| ||| ||||||| ||||||| ||| ||| | |||
Sbjct 2403 AATGAACAAATGCTCGTATACGAGTACATTTCAAATGGGTCTCTTAAAGACAGTTTTTCA 2462
Query 2019 GGGAAAAGTGGGATTAGACTT-GATTGGACGAGAAGGCTTAGAATAGCACTTGGTTCAGG 2077
||||| ||||| ||| || || |||||||| || || |||| |||||| |||||||||||
Sbjct 2463 GGGAAGAGTGGAATTCGA-TTAGATTGGACAAGGAGACTTAAAATAGCGCTTGGTTCAGG 2521
Query 2078 GAAGGGTTTGGCTTATCTTCATGAGCTTGCAGATCCTCCAATTATACACAGAGACGTTAA 2137
|| || ||||||||||||||||| ||||| ||||||||||||||||| |||||| | ||
Sbjct 2522 CAAAGGCTTGGCTTATCTTCATGAACTTGCTGATCCTCCAATTATACATAGAGACATCAA 2581
Query 2138 ATCAAGTAATGTATTACTTGATGAAAGTTTAACTGCAAAAGTTGCTGATTTTGGCTTATC 2197
||||| ||| | ||||||||||||| | ||||||||||||||||||||||||| | ||
Sbjct 2582 ATCAAATAACATCTTACTTGATGAAAATCTAACTGCAAAAGTTGCTGATTTTGG--TCTC 2639
Query 2198 T-C-AACTTGTGGAAGATGCTGAGAAAGCTAATGTAACGGCACAAGTGAAGGGAACTATG 2255
| | ||||||||| ||| |||||||| || |||| || ||||||| || ||||| |||
Sbjct 2640 TCCAAACTTGTGGGAGACCCTGAGAAAACTCATGTGACAACACAAGTTAAAGGAACCATG 2699
Query 2256 GGCTA-CTTGGATCCTGAGTACTACATGACGAATCAATTGACAGAGAAGAGCGATGTATA 2314
||||| ||| ||||||||||||||||||||||||||||| || |||||||||||||| ||
Sbjct 2700 GGCTACCTT-GATCCTGAGTACTACATGACGAATCAATTAACGGAGAAGAGCGATGTGTA 2758
Query 2315 TGGGTTTGGGGTTATGATGCTTGAGCTACTGACTGGTAAGAT-TCCTATAGAGA-ATGGA 2372
||||||||| || ||||||| |||||| | || || | || ||||||||||| | ||
Sbjct 2759 TGGGTTTGGTGTGGTGATGCTGGAGCTATTAACCGGGA-GAAGTCCTATAGAGAGA-GGC 2816
Query 2373 AAATATGTGGTGAAAGAGATGAAGATGAAGATGAATAAATCGAAGAACTTGTATGACCTA 2432
||||||||||||| |||| |||||| |||||||||| ||||| ||| ||||||||||||
Sbjct 2817 AAATATGTGGTGAGAGAGGTGAAGACAAAGATGAATACATCGAGGAATTTGTATGACCTA 2876
Query 2433 CAAGATTT-TCTGGACACTACGATCAGCGCAACGTCCAACAGGAATCTTAA-GGGATTTG 2490
||||| || | ||||||| ||||||| ||||| | | | ||||||| || ||| ||||
Sbjct 2877 CAAGAATTGT-TGGACACAACGATCATCGCAA-G-C-AGTGGGAATCTGAAAGGG-TTTG 2931
Query 2491 AAAAGTATGTAGA-TGTGGCTCTAAGATGCGTAGATCCAG-AAGGAGTGAAGAGGCCATC 2548
| ||||||||||| | ||||| | ||||| || || || ||||||| || ||||||||
Sbjct 2932 AGAAGTATGTAGACT-TGGCTTTGAGATGTGTGGAGG-AGGAAGGAGTTAATAGGCCATC 2989
Query 2549 AATGAATGAGGTTGTGAAAGAGATTGAGAACATAATGCAG-TATGCAGGATTAAACCCTA 2607
|||| |||||| ||||||||||||||||||||||||||| | ||| |||||||| ||||
Sbjct 2990 AATGGGTGAGGTGGTGAAAGAGATTGAGAACATAATGCAGCT-TGCGGGATTAAATCCTA 3048
Query 2608 ACGT-AGAATCAT-ATGCGAGTTCAAGAACGTATGATGAAGCAAGCAAAGAATCTGGAGA 2665
|| | ||| ||| | ||||||||||||||||||| || |||| ||||| |||||| ||
Sbjct 3049 AC-TCAGATTCAGCAA-CGAGTTCAAGAACGTATGAAGACGCAATCAAAGGATCTGGTGA 3106
Query 2666 TCTTTATGGAAAC-AACTCTTTTGAGTATAGTGC-AAGTTTCCCAACTACAAACCTCGAA 2723
|| |||||| | || |||||| |||| |||| || ||||||| || |||| || ||
Sbjct 3107 TCCTTATGGCAGTGAA-TCTTTTCAGTACAGTGGGAA-TTTCCCAGCTTCAAAGCTTGAG 3164
Query 2724 CCTCAATGA 2732
|| ||||||
Sbjct 3165 CCACAATGA 3173
Score = 852 bits (461), Expect = 0.0
Identities = 1236/1588 (78%), Gaps = 142/1588 (9%)
Strand=Plus/Plus
Query 77 GGATTTGACAT-CTAATCCTAATTTGA-CCGGACCGCTTCCACTAAATATCGGTAACCTT 134
||||||| ||| | |||||||| || | ||||||||||||||| ||||||||||||||||
Sbjct 593 GGATTTGTCATAC-AATCCTAAATT-ATCCGGACCGCTTCCACCAAATATCGGTAACCTT 650
Query 135 AAGG-AGTTGACGAACTTAAAT-CTTATGGGATGTGGTTTCAGTGGTCAAATCCCTGAGT 192
|| |||||| |||||| || ||| |||||||| |||||||||||||| |||||||||
Sbjct 651 -GGGAAGTTGAGGAACTT-GATCCTTGTGGGATGTAGTTTCAGTGGTCAACTCCCTGAGT 708
Query 193 CCATAGG-ATCTCTAGAACAACTTGTAACA-CTCTCCTTGAATTCAAATAAATTTAATGG 250
|||| || || ||| || ||||| | | | |||||| | |||| |||| |||||| |||
Sbjct 709 CCATTGGAAT-GCTAAAAGAACTTAT-ATATCTCTCCCTAAATTTAAATCAATTTAGTGG 766
Query 251 AACGATTCCGGCTTCCATTGGCCTGTTATCGAAACTATATTGGTTTGATATAGCTGACAA 310
||| ||||||||||| ||||||| |||||| |||||||||||||| |||||||| |||||
Sbjct 767 AACAATTCCGGCTTCAATTGGCCAGTTATCAAAACTATATTGGTTCGATATAGCAGACAA 826
Query 311 TCAGATAGAAGGAAAGCTTCCAGTTTCTGATGGGGCTTCTTTACCTGGACTTGATATGCT 370
||||||||||||| |||||||||||||| ||||| |||||| |||||||||||| |||||
Sbjct 827 TCAGATAGAAGGAGAGCTTCCAGTTTCTAATGGGACTTCTTCACCTGGACTTGACATGCT 886
Query 371 TCTTCAAACTAAGCATTTTCATTTTGGAAAAAACAAGCTTTCTGGTGATATCCCTGAA-A 429
|||||||||||||||||||||||||||||||||||||||||| || | ||||| || |
Sbjct 887 TCTTCAAACTAAGCATTTTCATTTTGGAAAAAACAAGCTTTCGGGCAAGATCCCAAAAGA 946
Query 430 AGCTATTCAG-TGCCAACATGACTTTAAAACATTTGCTATTCGATGGAAACCTACTAACC 488
| || ||||| | | ||||||||||| | |||| |||||||||||||||||| | | ||
Sbjct 947 A-CTTTTCAGCT-CAAACATGACTTTGATACATGTGCTATTCGATGGAAACCAATTCACG 1004
Query 489 GGTGAAATCCCACAAAGCCTCAGCCTTGTTAAAACATTGACGGTGTTACGCCTTGATAGG 548
|| ||||||||| | | |||||| || |||||||| ||||||||||||||||||||||||
Sbjct 1005 GGCGAAATCCCAGAGACCCTCAGTCTCGTTAAAACGTTGACGGTGTTACGCCTTGATAGG 1064
Query 549 AATAGACTAAGTGGAGAAATTCCTCCAAGTCTTAATAATCTCACAAATCTTCAA-GAACT 607
|| | ||| | |||||| |||||| ||| |||||||||||||||||||||| || |||||
Sbjct 1065 AACAAACTCATTGGAGATATTCCTTCAAATCTTAATAATCTCACAAATCTT-AATGAACT 1123
Query 608 GTACTTGTCCGACAACAAATTTACCGGTAGTCTTCCAAGTTTAACCAGCTTGACCAGTCT 667
||||||| || |||||| |||||| |||| |||||||| |||||||||||||||||||||
Sbjct 1124 GTACTTGGCCAACAACAGATTTACTGGTACTCTTCCAAATTTAACCAGCTTGACCAGTCT 1183
Query 668 CTCCACATTAGCTGTCAGCAATAAC-CGATTA-ACTTCCTCACAAATTTCATCATGGATC 725
|| |||||| | ||| ||||||||| | || | ||| |||| ||| |||||||||||
Sbjct 1184 CTACACATTTGATGTGAGCAATAACACT-TTGGATTTC-TCACCCATTCCATCATGGATC 1241
Query 726 TCATT-ATTACCGACTTCCT-TGGCAACATTAAGGATGGCAGGGCTCCAACTTCAA-GGT 782
|| || |||||| || ||| | ||||||||||||||| |||| |||||||| || |||
Sbjct 1242 TC-TTCATTACC--CTCCCTAT--CAACATTAAGGATGGAAGGGATCCAACTT-AATGGT 1295
Query 783 CCAATACCAACCTCCCTCTTCAGTCTTCCTGAATTGCAGACTGTTATCCTAAAGCGTAAC 842
||||||||| || | ||||| | |||| | ||||||||||| || ||||||| ||
Sbjct 1296 TCAATACCAATATCATTTTTCAGCCCTCCTCAGTTGCAGACTGTAATTTTAAAGCGCAA- 1354
Query 843 TGGCTAAAC-G-AAACACT-AGACTTCGGTACCA-ACA--AG-AGCCAAAACCTAGATTT 895
| | || | | |||| || |||||| ||||| | || || ||||| | || ||
Sbjct 1355 TAG-TATAGTGGAAAC-CTTAGACTTTGGTAC-AGACTTTAGCAGCCAGT---TGGAGTT 1408
Query 896 TGTGGATTTACAATATAATGACATAACAGAGTATATTAAACAACCAGCTAATAAAGGAAG 955
||||||||||||||| ||||| ||||| || | ||| |||| | ||||||||||||
Sbjct 1409 TGTGGATTTACAATACAATGAAATAACTGA-T-TAT-AAACCAGCAGCTAATAAAGTCCT 1465
Query 956 CAGCAGGATAGTAATCTTGGCAAATAATCCAGTGTGCCCCGAGGTAGGGAACCCA-CCAA 1014
| || | ||||| |||||||||||||||||||||| |||| ||||| | || |
Sbjct 1466 C--CA--A--GTAATATTGGCAAATAATCCAGTGTGCCTAGAGGC-GGGAAACGGGCCGA 1518
Query 1015 ATGAATACTGCAT-AG-AAGTCGAACACAATTCCTCATATTCTTC-C-CCTAAGAACACA 1070
|| |||||| | || || || |||||||| |||||| |||| | | || || || ||
Sbjct 1519 AT---TACTGC-TCAGTAA-TCCAACACAATACCTCATTTTCTACACTCCCAACAA-AC- 1571
Query 1071 TGTGGTCGTTGTAGTGGTGAGGACAGGGAACCCATTCCCACCACGTGCCGTTGTGTGTAT 1130
||| || ||| | | ||| || |||| | | ||| || |||| | |||| ||||
Sbjct 1572 TGTCCTCCCTGT-GA--TAAGGGCATGGAAGCGAGTCCTAC---GTGCAGCTGTGCGTAT 1625
Query 1131 CCAATCACAGGAACACTC-ACTTTTAGGTCACCTTCCTTCTCAGGGTA-TTCCAACAACG 1188
||| ||| ||||||||| |||| |||| |||||||||||||||| ||| ||| |
Sbjct 1626 CCATTCATGGGAACACTCTACTTCC-GGTCTCCTTCCTTCTCAGGGTTGTTC-AACTCC- 1682
Query 1189 A-TA-CATTCGAGAAC-CT-CAGGCTAAACCTA-A-CTGG-TTTCTTTGAGAA-TAGAAA 1240
| || | ||| || || ||| || | | | | || ||||||| |||| | ||
Sbjct 1683 ACTAAC-TTCTC-AATTCTACAG---AAGGCAATAGC-GGATTTCTTTAAGAAGTTCAA- 1735
Query 1241 TTATACAGTGGATTCTGTGGCCATAAGAAACATAAGAGAAGA-TG-AAGATGATCATTAT 1298
|||| | || || || |||| | ||||||||||||| || | || ||||||| |
Sbjct 1736 TTATCCTGTAGACTCCGTGGGTGTCCGAAACATAAGAGA-GAATCCAAC-TGATCATCAA 1793
Query 1299 CTTCTAATAGATCTCTCTC-TCTTTCCATATAAACAAGACAGA-TTT-AATGAGACGGGA 1355
|||||||||||||| | | ||||||||| | || | ||| ||| ||| |||| |||
Sbjct 1794 CTTCTAATAGATCTAT-TAGTCTTTCCAT-TGGGCAGGG-AGACTTTTAATCAGACAGGA 1850
Query 1356 ATGG-A-TAGT-GTTATTTCCAGGTTTAGCACAC-AGACTTATAAGCCTCCTA--ATACC 1409
||| | | || | | ||| || ||||||| || ||| ||||||||||||| |||
Sbjct 1851 ATGTCACTTGTTGGT-TTTGCA--TTTAGCA-ACCAGAGTTATAAGCCTCCTCCGATA-- 1904
Query 1410 TTTGGCCCTTACATATTCAAAGCCAATAAGTACAATA-AGTTCCCTGCA-G--GA-GGTT 1464
||||||||||| || |||||||| || |||||| | ||||| ||| | | || ||||
Sbjct 1905 TTTGGCCCTTATATTTTCAAAGCTGATTTGTACAA-ACAGTTCTCTG-ATGTAGAAGGTT 1962
Query 1465 CA--AAC-TCGTCA--CA----CAT-C--ATTGGAGCTGTAGTTGGTTCTACTGTT-TT- 1510
|| || || ||| || ||| | |||||||| ||||||||| ||| |||| ||
Sbjct 1963 CATCAAAGTCATCAAACAAAAGCATTCTCATTGGAGCAGTAGTTGGTGCTATTGTTCTTC 2022
Query 1511 T-CTGTTAATTCTAATGATAGCTGGGATCTATGCTCTTAAGCAAAAGA-GAAGAGCAGAG 1568
| ||||| || || ||||||||||| || ||||||| ||| |||| || ||||||||
Sbjct 2023 TACTGTTG-TT--AACAATAGCTGGGATTTACGCTCTTAGGCAGAAGAAGA-GAGCAGAG 2078
Query 1569 AAAGCAAATGATCAAATTAATCCTTTTG 1596
| ||||| || ||||| |||||||||||
Sbjct 2079 AGAGCAACTGGTCAAAATAATCCTTTTG 2106
> Ahg495037 jgi|Araly1|495037|fgenesh2_kg.8__853__AT5G49770.1
Length=2972
Score = 870 bits (471), Expect = 0.0
Identities = 1226/1575 (78%), Gaps = 113/1575 (7%)
Strand=Plus/Plus
Query 77 GGATTTGACA-TCTAATCCT-AATTTGACCGGACCGCTTCCA-CTAAATATCGGTAACCT 133
|||||||||| | |||||| || ||| | |||||||||||| | |||||||||||||||
Sbjct 419 GGATTTGACAGGC-AATCCTGAA-TTGTCTGGACCGCTTCCAGC-AAATATCGGTAACCT 475
Query 134 TAAGGAGTTGA-CGAACTTAAATCTTATGGGATGTGGTTTCAGTGGTCAAATCCCTGAGT 192
||| |||||| | ||| | ||||||||||||| ||||| |||| |||||||||| |
Sbjct 476 CAAGAAGTTGATTG-TCTTGAGCCTTATGGGATGTGATTTCAATGGTGAAATCCCTGATT 534
Query 193 CCATA-GG-ATCTCTAGAACAACTTGTAACACTCTCCTTGAATTCAAATAAATTTAATGG 250
||||| || |||| | ||||||||| || ||||||| |||||| ||||||||||| |||
Sbjct 535 CCATAGGGAATCT-T-GAACAACTTACAAGACTCTCCCTGAATTTAAATAAATTTACTGG 592
Query 251 AACGATTCCGGCTTCCATTGGCCTGTTATCGAAACTATATTGGTTTGATATAGCTGACAA 310
||| ||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||
Sbjct 593 AACAATTCCGGCTTCCATTGGACGGTTATCGAAACTATATTGGTTCGATATAGCTGACAA 652
Query 311 TCAGATAGAAGGAAAGCTTCCAGTTTCTGATGGGGCTTCTTTACCTGGACTTGATATGCT 370
|||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct 653 TCAGATCGAAGGAAAGCTTCCAGTTTCTGATGGGGCTTCTTTATCTGGACTTGACATGCT 712
Query 371 TCTTCAAACTAAGCATTTTCATTTTGGAAAAAACAAGCTTTCTGGTGATATCCCTGAAAA 430
|||||||||| ||||||||||||| | || ||||||||||| || || ||||| |||||
Sbjct 713 TCTTCAAACTGGGCATTTTCATTTTAGTAATAACAAGCTTTCAGGCGAAATCCCAGAAAA 772
Query 431 GCTATTCAG-TGCCA-ACATGACTTTAAAACATTTGCTATTCGATGGAAACCTACTAACC 488
||| || || | | | |||||||||| |||| ||||||| |||||||||| | | ||
Sbjct 773 GCTCTTTAGCT-C-AGACATGACTTTGCTACATGTGCTATTTGATGGAAACCAATTCACG 830
Query 489 GGT-GAAATCCCACAAAGCCTCAGCCTTGTTAAAACATT-GACGGTGTTACGCCTTGATA 546
||| | | ||||| | |||||| | || ||||||| ||| ||| ||||||||||||||||
Sbjct 831 GGTAGGA-TCCCAGAGAGCCTCGGTCTAGTTAAAA-ATTTGACAGTGTTACGCCTTGATA 888
Query 547 GGAATAGACTAAGTGGAGAAATTCCTCCAAGTCTTAATAATCTCACAAATCTTCAAGAAC 606
|||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct 889 GGAATAGACTAACTGGAGACATTCCTTCAAGTCTTAATAATCTCACAAATCTTCAAGAAC 948
Query 607 TGTACTTGTCCGACAACAAATTTACCGGTAGTCTTCCAAGTTTAACCAGCTTGACCAGTC 666
|| | |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct 949 TGCATTTGTCCGACAACAAATTTACAGGTAGTCTTCCAAATTTAACCAGCTTGACCAGTC 1008
Query 667 TCTCCACATTAGCTGTCAGCAATAACCGATTAAC-TTCCTCACAAATTTCATCATGGATC 725
||| |||||| | ||| |||||||||| || | || |||| || |||||||||||
Sbjct 1009 TCTACACATTGGATGTGAGCAATAACCCCTTGGCATTA-TCACCGGTTCCATCATGGATC 1067
Query 726 TCATTATTACCGACTTCCTTGGCAACATTAAGGATGGCAGGGCTCCAACTTCAAGGTCCA 785
| || ||| ||| | ||| ||||||||||||||| || | || ||| | ||||||
Sbjct 1068 CCTTTCTTAA--ACT-CTTTGTCAACATTAAGGATGGAAGATATTCAGCTTGATGGTCCA 1124
Query 786 ATACCAACCTCCCTCTTCAGTCTTCCTGAATTGCAGACTGTTATCC-TAAAGCGTAA-CT 843
||||||| |||||||| || | || | | |||||||||||| ||| |||||| || ||
Sbjct 1125 GTACCAACGTCCCTCTTTAGCCCTCTTCAGTTGCAGACTGTT-TCCCTAAAGCACAATCT 1183
Query 844 GGCTAAACGA-AACACTAGAC-TTCGGTACCAACAAGAGC-CAAAACCTAGATTTTGTGG 900
||||| | |||| | ||| || ||||||||| | ||| || || | ||||||||||
Sbjct 1184 TA-TAAAC-ACAACATTGGACCTT-GGTACCAACTATAGCACACAAT-TGGATTTTGTGG 1239
Query 901 ATTTACAATATAA-TGACATAACAGAGTATATTAAA-CAACCAGCTAATAAAGGAAGCAG 958
|| ||| | |||| | |||||| | || ||| ||| || | ||||||||| | |
Sbjct 1240 ATCTACGAGATAACTT-CATAACTG-GT-TAT-AAATCAGC-AGCTAATAACC-ACGT-- 1291
Query 959 CAGGATAGTAATCTTGGCAAATAATCCAGTGTGCCCCGAGGTAGG-GAACCCACCAAA-T 1016
| | | |||||| |||||| |||||| |||||||| || || ||||| | || | |
Sbjct 1292 C-G-A-AGTAATGTTGGCAGATAATCAAGTGTGCCAAGACCC-GGCGAACC-AGCATAGT 1346
Query 1017 GAATACTGCA-TAGAAGTCGAACACAA-TTCCTCATATTCTTCC--CCTAAGAACACATG 1072
|||||||||| | | |||| || ||| |||| ||| |||| || || || || || ||
Sbjct 1347 GAATACTGCAGT-GCAGTCCAAG-CAAGTTCCACATTTTCTACCATCCCAA-AAGAC-TG 1402
Query 1073 TGGTCGTTGTAGTGGTGA-GGACAGGGAACCCATTCCCACCACGTGCCGTTGTGTGTATC 1131
||||| | | || || | || |||||||| | || | | |||| ||||||||||
Sbjct 1403 TGGTCATCATTGTAGTAAAGGT-AGGGAACCGAATCA-AGG-C-TGCCACTGTGTGTATC 1458
Query 1132 CAATCACAGGAACACTCACTTTTAGGTCACCTTCCTTCTCAGGGTATTCCAACAAC-GAT 1190
|| | |||||| | |||| || ||||| ||||||||||| |||| |||||||||| | |
Sbjct 1459 CACTTACAGGAGTATTCACCTTAAGGTCTCCTTCCTTCTCCGGGTTTTCCAACAACAG-T 1517
Query 1191 ACATTCGAGA-ACCTCAGGCTAAACCT-AACTGG-TTTCTTTGAGAATAGAAATTATACA 1247
|| || | | | || || | | | ||| || ||||||| ||||| | || ||| |
Sbjct 1518 ACGTTT-ATACAGTTCGGGG-AGAGTTTAAC-GGCTTTCTTTAAGAATGGCAAGTATCCT 1574
Query 1248 GTGGATTCTGTGGCCATAAGAAACATAAGAGAAGA-TG-AAGATGATCATTATCT-TCTA 1304
||||| ||||||||||| || |||||||| || || | || |||| || |||| | ||
Sbjct 1575 GTGGACTCTGTGGCCATGAGCAACATAAGCGA-GAATCCAAC-TGATTATCATCTAT-TA 1631
Query 1305 ATAGATCTCTCTCTCTTTCCATATAA-ACAAGACAGATTTAATGAGACGGGAATGGA-TA 1362
|||||||| | ||||||||| | | | ||| | |||||| ||||||||||||| |
Sbjct 1632 ATAGATCTAACGATCTTTCCAT-TGGGAGACGACCGTTTTAATCAGACGGGAATGGACTC 1690
Query 1363 GTGTTATTTCCAGG-TTTAGCACACAGACTTATAAGCCTCCT--AATACCTTTGGCCCTT 1419
| ||| ||| | |||| || ||| |||||||||||||| || | ||||| ||||
Sbjct 1691 -TATTAATTCT-GTATTTACCATTCAGGCTTATAAGCCTCCTCCAAGA--TTTGGTCCTT 1746
Query 1420 ACATATTCAAAGCCAATAAGTACAATA-AGTTCCCTG---CAGGAGGTTCAAACTC-GTC 1474
| || || ||| || ||||||| | | ||| ||| ||| | ||| || || ||
Sbjct 1747 ATATTTTTGTCGCCGATCAGTACAAAACA-TTCTCTGATACAGAAACTTCCAAGTCAGTA 1805
Query 1475 AC-A----C---ATCATTGGAGCTGTAGTTGGT-TC-TACTGTTTTTCTGTTAATTCTAA 1524
| | | || |||||| | ||||||||| | || ||| | ||||| || |
Sbjct 1806 AGTATGAGCGTTATAATTGGAACAGTAGTTGGTGTTGTA--GTTCTACTGTTG-TTGT-- 1860
Query 1525 TGA-TA-G-CTGGGATCTATGCTCTTAAGCAAAAGAGAAGAGCAGAGAAAGCAAATGATC 1581
|| || | ||||||| || ||||||| ||| ||||| ||||||||||||||||||||||
Sbjct 1861 TGGCTATGGCTGGGATTTACGCTCTTAGGCAGAAGAGGAGAGCAGAGAAAGCAAATGATC 1920
Query 1582 AAATTAATCCTTTTG 1596
|||||||||||||||
Sbjct 1921 AAATTAATCCTTTTG 1935
> Ahg495035 jgi|Araly1|495035|fgenesh2_kg.8__851__AT5G49750.1
Length=1327
Score = 693 bits (375), Expect = 0.0
Identities = 753/929 (81%), Gaps = 52/929 (6%)
Strand=Plus/Plus
Query 99 TTGACCGGACCGCTTCCACTAAATATCGGTAACCTTAAGGAGTTGACGAACTTAAAT-CT 157
||||| ||||| ||||||| ||| || |||||||||||| |||| | |||||| || ||
Sbjct 353 TTGACTGGACCACTTCCACCAAACATTGGTAACCTTAAGAAGTTAAAGAACTT-GATCCT 411
Query 158 TATGGGATGTGGTTTCAGTGGTCAAATCCCTGAGTCCATAGGATCTCTAGAACAACTT-G 216
| ||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||
Sbjct 412 TGTGGGATGTGGTTTTAGTGGTCAAATCCCTGAGTCCGTAGGATCTTTAGAACAACTTAT 471
Query 217 TAACACTC-TCCTTGAATTCAAATAAATTTAATGGAACGATTCCGGCTTCCATTGGCCTG 275
||| ||| |||| ||||||||||||||||||||||| ||||| || ||| |||| | |
Sbjct 472 TAA-GCTCGCCCTT-AATTCAAATAAATTTAATGGAACAATTCCAGCATCCGTTGGACGG 529
Query 276 TTATCGAAACTATATTGGTTTGATATAGCTGACAATCAGATAGAAGGAAAGCTTCCAGTT 335
|| ||||||||| ||||||| ||||||| |||||||| |||||||||| |||||||| |
Sbjct 530 TTGTCGAAACTAGATTGGTTCGATATAGATGACAATCGGATAGAAGGAGAGCTTCCAATA 589
Query 336 TCTGATGGGGCTTCTTTACCTGGACTTGATATGCTTCTTCAAACT-AAGCATTTTCATTT 394
||| ||||| |||||| |||||||||||| ||||||||||||||| || || || |||||
Sbjct 590 TCTAATGGGACTTCTTCACCTGGACTTGACATGCTTCTTCAAACTCAA-CACTTCCATTT 648
Query 395 TGGAAAAAACAAGCTTTCTGGTGATATCCCTGAAAAGCTATTCAG-TGCCAACATGACTT 453
||||||||| |||||||| || |||||||| |||||||| ||||| | | ||||||| |
Sbjct 649 TGGAAAAAATAAGCTTTCAGGCGATATCCCGGAAAAGCTCTTCAGCT-CAAACATGAAAT 707
Query 454 TAAAACATTTGCTATTCGATGGA-AACCTACTAACCGGTGAAATCCCACAAAGCCTCAGC 512
| | |||| |||||||| || || |||| | | || || |||||||| |||||||| ||
Sbjct 708 TGATACATGTGCTATTCAAT-GATAACCAATTCACAGGAAAAATCCCAAAAAGCCTCGGC 766
Query 513 CTTGTTAAAAC-ATTGACGGTGTTACGCCTTGATAGGAATAGACTAAGTGGAGAAATTCC 571
|| |||| ||| | || ||| |||||||||||| |||||||||||||||||| |||||
Sbjct 767 CTCGTTACAACGA-TGTTAGTGATACGCCTTGATACGAATAGACTAAGTGGAGATATTCC 825
Query 572 TCCAAGTCTTAATAATCTCACAAATCTTCAAGAACTGTACTTGTCCGACAACAAATTTAC 631
||||||||||||||||||||||| ||| | ||||| ||||| || |||||||||||||
Sbjct 826 TCCAAGTCTTAATAATCTCACAAGGCTTGACCAACTGCACTTGGCCAACAACAAATTTAC 885
Query 632 CGGTAGTCTTCCAAGTTTAACCAGCTTGACCAGTCTCTCCAC-AT-TAGCTGTCAGCAAT 689
||||||||||||| |||| |||| |||||| || |||| | | ||| ||| ||||||
Sbjct 886 AGGTAGTCTTCCAAATTTAGCCAGTTTGACC-GT-TCTCGATGAAATAGATGTGAGCAAT 943
Query 690 AAC-CGATT--AACTTCCTCACAAATTTCATCATGGATCTCATT-ATTACCGACTTCCTT 745
||| | || || ||| |||| || ||||||||||||| || ||||| | | ||||
Sbjct 944 AACACT-TTGGAA-TTC-TCACTCGTTCCATCATGGATCTC-TTCATTAC-G-CAACCTT 997
Query 746 GGCAACATTAAGGATGGCAGGGCTCCAACTTCAA-GGTCCAATACCAACCTCCCTCTTCA 804
||||||||| ||||| |||| ||||||| || ||| ||||||||| ||| |||||||
Sbjct 998 T-CAACATTAAAGATGGAAGGGATCCAACT-CATTGGTTCAATACCAATCTCACTCTTCA 1055
Query 805 GTCTTCCT-GAATTGCAG-ACTGTTATCCTAAAGCGTAA-CTGGCTAAACGAAACACTAG 861
||||| | || ||||| | ||||| ||| |||||||| | || |||||| ||| || |
Sbjct 1056 GTCTTATTCGA-TTGCAATA-TGTTAACCTTAAGCGTAATC-GGATAAACGGAAC-CTTG 1111
Query 862 -ACTTCGGTACCAACAAGAGCCAA-AACCTAGAT-TTTGTGGATTTACAATATAATGACA 918
| || ||||||||| | ||| || ||| | || ||||| ||||||| ||| ||| |||
Sbjct 1112 GAATTTGGTACCAACTATAGCAAACAAC-T-GAAGTTTGTTGATTTACGATACAATAACA 1169
Query 919 TAACAGAGTATATTAAACAACCAGCTAATAAAGGAAGCAGCAGGATAGTAATCTTGGCAA 978
|||| | || ||| |||||| |||||||| || | | | || | ||||| |||||||
Sbjct 1170 TAACTG-GT-TAT-AAACAAGCAGCTAATGAACGCATC--CA--A--GTAATATTGGCAA 1220
Query 979 ATAATCCAGTGTGCCCCGAGGTAGGGAAC 1007
|||||||||||||| ||||||||||||
Sbjct 1221 ATAATCCAGTGTGCGGGGAGGTAGGGAAC 1249
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 103072202970
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5