BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G50300.1 Length=2057 Score E Sequences producing significant alignments: (Bits) Value Ahg495089 jgi|Araly1|495089|fgenesh2_kg.8__905__AT5G50300.1 2815 0.0 Ahg489598 jgi|Araly1|489598|fgenesh2_kg.6__2732__AT5G50300.1 1029 0.0 > Ahg495089 jgi|Araly1|495089|fgenesh2_kg.8__905__AT5G50300.1 Length=1989 Score = 2815 bits (1524), Expect = 0.0 Identities = 1848/2000 (92%), Gaps = 40/2000 (2%) Strand=Plus/Plus Query 1 CTCCTGCATTTGCTCCCTATATTCCTCATTATTATTAGTCATGGGAAGAGAGAAGACGTT 60 |||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||| Sbjct 1 CTCCTGCATTTGCTCCCTATATTCCTCATTATTATTAGCCATGGGTAGAGAGAAGAAGTT 60 Query 61 ATGCAAGTCGTGGAGCGACATGAAGAAACACTTAAACGACACCGTTTCCAAGAGCTTCAT 120 |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct 61 ATGCAAGTCGTGGAACGACATGAAGAAACACTTAAACGACACCGTTTCCAAGAGTTTCGC 120 Query 121 CGGCCGTTTCTTCAAGCTCGAAGCAAGAAAAACAACGTTCACAACTGAACTACGAGCTGC 180 ||| ||||||||||| || |||||||| |||||||| |||||||| |||||||||||||| Sbjct 121 CGGTCGTTTCTTCAAACTAGAAGCAAGGAAAACAACTTTCACAACCGAACTACGAGCTGC 180 Query 181 GACCGCCACATTCCTCACCATGGCTTATATCATTACCGTGAACGCCAATATCTTAGCCGA 240 ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct 181 AACCGCCACATTCCTCACCATGGCTTATATCATTACTGTTAACGCCAATATCTTAGCCGA 240 Query 241 CTCCGGTGCCACTTGCTCCATCAACGACTGTTCCACCGTGGCCAGTTCTTCACCACCCGG 300 ||||||||||||||||||| || ||||||| ||| | |||||| |||||||| ||||||| Sbjct 241 CTCCGGTGCCACTTGCTCCTTCCACGACTGCTCCGCTGTGGCCGGTTCTTCAGCACCCGG 300 Query 301 TCCAGAATGCGTCCTCGGGTCTAACCCTGGCTACGAACAATGTATTTCTAGGGTTAAAAA 360 |||||| |||||||| || ||||| || ||||||||| ||||| || ||||||||||||| Sbjct 301 TCCAGAGTGCGTCCTTGGTTCTAATCCAGGCTACGAAGAATGTCTTGCTAGGGTTAAAAA 360 Query 361 GGACCTCGTTGTGGCTACTTCTTTATCAGCCATGGTGGGTTCATTAGCAATGGGTTTGTT 420 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 361 GGACCTCGTTGTGGCTACTTCTTTATCAGCCATGGTTGGTTCATTAGCAATGGGTTTGTT 420 Query 421 AGCTAATCTCCCTTTTGGACTTGCTCCGGGTATGGGAGCCAACGCTTACATCGCATACAA 480 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 421 AGCTAATCTCCCTTTTGGACTTGCTCCGGGTATGGGAGCCAATGCTTACATCGCATACAA 480 Query 481 CGTTGTCGGGTTTCGTGGATCCGGTTCTATCTCTTATCATACCGCTATGGCCATTGTGCT 540 ||| ||||| |||||||| || ||||| |||||||| ||||||||||||||||| ||||| Sbjct 481 CGTAGTCGGCTTTCGTGGCTCTGGTTCAATCTCTTACCATACCGCTATGGCCATCGTGCT 540 Query 541 CCTTGAAGGATGTGCCTTTCTCGCTGTGTCGGCTTTAGGACTCCGCGGGAAACTTGCTCG 600 ||||||||||| || ||||| || || || ||||||||||||||||||||||| ||||| Sbjct 541 GCTTGAAGGATGCGCGTTTCTAGCGGTTTCCGCTTTAGGACTCCGCGGGAAACTAGCTCG 600 Query 601 TCTCATCCCTCAAACGGTGAGACTGGCCTGCGCGGTCGGTATAGGAATGTTCATTGCCTT 660 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct 601 TCTCATCCCTCAAACGGTGAGACTGGCCTGCGCGGTTGGTATAGGAATGTTCATAGCCTT 660 Query 661 TGTAGGTTTACAAATGAACCAGGGCATTGGCCTCGTGGGACCGGATAAGTCAACTCTAGT 720 ||| ||||| || ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 661 TGTCGGTTTGCAGATGAACCAGGGTATTGGCCTCGTGGGACCGGATAAGTCAACTCTAGT 720 Query 721 GACATTAACCGCCTGCGCAGAGACGGATCCTGTCACTGGAGCTTGCTTAGGAGGTAAAAT 780 |||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| Sbjct 721 GACATTAACCGCTTGCGCAGAGACGGATTCTGTCACTGGAGCTTGCTTAGGAGGGAAAAT 780 Query 781 GAAGAGTCCTACGTTTTGGTTAGCCGTTGTCGGGTTTCTTATAACGAG-TTTCGGTCTAA 839 |||||||||||||||||||||||||||||| |||||||| |||||||| ||| ||||||| Sbjct 781 GAAGAGTCCTACGTTTTGGTTAGCCGTTGTAGGGTTTCTCATAACGAGCTTT-GGTCTAA 839 Query 840 TGAAGAACGTCAAAGGTAGTATGATTTACGGAATCGTGTTCGTCACGGCTATTTCTTGGA 899 |||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||| Sbjct 840 TGAAGAACGTCAAAGGTAGTATGATTTATGGAATCGTGTTCGTTACGGCTGTTTCTTGGA 899 Query 900 TTAGAGGCACTCAAGTCACAATCTTTCCACACACTCCTCTTGGAGACTCAAACTACAACT 959 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 900 TTAGAGGCACTCAAGTCACAATCTTTCCACACACTCCTCTTGGAGACTCAAACTATAACT 959 Query 960 ACTTCACAAAAATCGTTGACTTTCACAAGATCCAGTCAACTTTAGGAGCCATAAGCTTCA 1019 |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct 960 ACTTCACAAAAATCGTTGACTTTCACAAGATCCAGTCAACGTTAGGAGCTATAAGCTTCA 1019 Query 1020 CGGAGTTTAGAAAGAGCGAGGTTTGGGTCGCGTTCGCTACACTCTTCTACGTTGACCTTC 1079 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| | Sbjct 1020 CGGAGTTTAGAAAGAGCGAGGTTTGGGTTGCGTTCGCTACACTCTTTTACGTTGACCTCC 1079 Query 1080 TTGGTACGACCGGAGTACTCTACACAATGGCTGAGATCGGAGGATTCGTGGAAGATGGGA 1139 |||| |||||||||||||||||||| ||||||||||||||||| ||||||||||| |||| Sbjct 1080 TTGGCACGACCGGAGTACTCTACACGATGGCTGAGATCGGAGGCTTCGTGGAAGACGGGA 1139 Query 1140 AGTTTGAAGGAGAGTACGCGGCGTACTTAGTAGACGCCGGCTCCTCCGTGGTGGGATCGG 1199 |||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||| Sbjct 1140 AGTTCGAAGGAGAGTACGCGGCTTACTTAGTGGACGCCGGCTCCTCCGTGGTGGGATCGG 1199 Query 1200 CGTTAGGTGTTACAACGACGGCGACTTTTGTGGAGTCTTCGGCGGGGTTGAAAGAAGGAG 1259 ||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct 1200 CGTTAGGGGTTACAACGACAGCGACTTTCGTGGAGTCTTCGGCGGGGTTGAAAGAAGGAG 1259 Query 1260 GGAAAACGGGGCTAACGGCCGTTATCGTAGG-GTTGTATTTCTTGGCGTCAATGTTTTTT 1318 |||||||||||||||| |||||||| ||||| | |||||||||||||||| |||||||| Sbjct 1260 GGAAAACGGGGCTAACAGCCGTTATTGTAGGAG-TGTATTTCTTGGCGTCGATGTTTTTG 1318 Query 1319 ACGCCGTTAGTTACTAACGTGCCGAGGTGGGCGGTTGGACCGTCGTTGGTGATGGTTGGT 1378 ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1319 ACGCCGTTAGTGACTAACGTGCCGAGGTGGGCGGTTGGGCCGTCGTTGGTGATGGTTGGT 1378 Query 1379 GTGATGATGATGGGAGTTGTAAAAGATATTAGATGGGGAGAGACTAAAGAAGCCGTGACA 1438 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1379 GTGATGATGATGGGAGTTGTAAAAGATATTAGATGGGGAGAGACTAAAGAAGCCGTGACG 1438 Query 1439 GCATTTGTAACGATCTTGCTTATGCCGTTGACTTATTCCATTGCTAATGGGATTATTGCT 1498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1439 GCATTTGTAACGATCTTGCTTATGCCGTTGACTTATTCCATTGCTAATGGGATTATTGCT 1498 Query 1499 GGTATTGGTATATATCTTGCATTAAGCATGTACGATGTCGTTTTGGGAGTTGCAAAATGG 1558 |||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||| Sbjct 1499 GGTATTGGTATATATCTTGCTTTAAGCATGTACGATGTCGTTTTGGGAGTTGCCAAGTGG 1558 Query 1559 CTTAACGGGGTTAGAAAACGGGTTATGAGAGAGCATAATCAAGTTTCTTCCGTCGCTACC 1618 ||||| || ||||| |||||||||||||||||||||||||||||||| ||||| |||||| Sbjct 1559 CTTAATGGTGTTAGGAAACGGGTTATGAGAGAGCATAATCAAGTTTCCTCCGTTGCTACC 1618 Query 1619 GTCGAGATCGTTTGATTATTAACGATAACCGATGTCACAAAACTGGTTTTAGTGGTGTGT 1678 ||||||||||||||||| || ||||||||||||||||| |||| |||||||||||||||| Sbjct 1619 GTCGAGATCGTTTGATTGTTGACGATAACCGATGTCACGAAACCGGTTTTAGTGGTGTGT 1678 Query 1679 GAGTGTGTACCGGAACTGGTGGAATTTTTCACATGGTCGGTCGTTGGATGACCATGCAAA 1738 | |||||||||||| |||||||| ||||||||||||||||||||||||||| | ||||| Sbjct 1679 G--TGTGTACCGGAAGTGGTGGAACTTTTCACATGGTCGGTCGTTGGATGACAAAGCAAA 1736 Query 1739 GACCCGTCATGAATGCTCTCGGTGtttttttttctctttcttttactttcttgttgtttt 1798 ||||||||||||||||| | | |||| | |||| | |||||||| Sbjct 1737 GACCCGTCATGAATGCT-T---TATTTTATGTTCT-T---------------GTTGTTTT 1776 Query 1799 ggtttagtttgCGTAGGAGAGAGTAGTGAAGTAACATTGGATGCATCAGCTGCCATGAAC 1858 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1777 GGTTTAGTTTGCGTAGGAGAGAGTAGTGAAGTAACATTGGATGCATCAGCTGCCATGAAC 1836 Query 1859 GTGTGTTTGATAATTTCTTGGCTGCTTGTGCATGCATTGTTTCTACTTTGTAGGGTTCTA 1918 |||| || | ||||| | ||||||||||||||||||||||| | ||||||||||| Sbjct 1837 GTGTATT-G-TAATT-CATGGCTGCTTGTGCATGCATTGTT-C------GTAGGGTTCTA 1886 Query 1919 TTGTTTCAACTAAATGCTTCTTTTGTTTGTAGCATATATGTCAATCAAAGACTTCTGAGT 1978 | | |||||| |||||||||||||||||||||||||| | |||||||||||||| || || Sbjct 1887 T-GCTTCAACAAAATGCTTCTTTTGTTTGTAGCATAT-T-TCAATCAAAGACTTTTGGGT 1943 Query 1979 CCTTCAGAAATTGC-AAATT 1997 |||||| |||||| ||||| Sbjct 1944 CCTTCATAAATTGTTAAATT 1963 > Ahg489598 jgi|Araly1|489598|fgenesh2_kg.6__2732__AT5G50300.1 Length=1704 Score = 1029 bits (557), Expect = 0.0 Identities = 877/1013 (87%), Gaps = 95/1013 (9%) Strand=Plus/Plus Query 985 CAAGATCCAGTCAACTTTAGGAGCCATAAGCTTCACGGAGTTTAGAAAGAGCGAGGTTTG 1044 ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 781 CAA-ATCCAGTCAACGTTAGGAGCCATAAGCTTCACGGAGTTTAGAAAGAGCGAGGTTTG 839 Query 1045 GGTCGCGTTCGCTACACTCTTCTACGTTGACCTTCTTGGTACGACCGGAGTACTCTACAC 1104 ||||||||||||||||||||| ||||||||||| || || ||||| |||||||||| || Sbjct 840 GGTCGCGTTCGCTACACTCTTTTACGTTGACCTCCTCGGCACGACTGGAGTACTCT--AC 897 Query 1105 AATGGCTGAGATCGGAGGATTCGTGGAAGATGGGAAG-TTTGAAGGAGAGTACGCGGCGT 1163 | | ||| || | | | |||| ||| | || | ||| || | ||| | Sbjct 898 -A---C---GAT----GG---C-T-G-AGATAGGAGGCTTCG-TGGA-AG-A--CGG-G- 933 Query 1164 ACTTAGTAGACGCCGGCTCCTCCGTGGTGGGATCGGCGTTAGGTGTTACAACGACGGCGA 1223 | | |||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct 934 A---A-TAGACGCCGGCTCCTCCGTGGTGGGATCGGCGCTAGG-GTTACAACGACGGCGA 988 Query 1224 CTTTTGTGGAGTCTTCGGCGGGGTTGAAAGAAGGAGGGAAAACGGGGCTAACGGCCGTTA 1283 |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 989 CTTTCGTGGAGTCTTCGGCGGGGTTGAAAGAAGGAGGGAAAACAGGGCTAACGGCCGTTA 1048 Query 1284 TCGTAGG-GTTGTATTTCTTGGCGTCAATGTTTTTTACGCCGTTAGTTACTAACGTGCCG 1342 | ||||| | |||||||||||||||| |||||||| ||||||||||| |||||||||||| Sbjct 1049 TAGTAGGAG-TGTATTTCTTGGCGTCGATGTTTTTGACGCCGTTAGTGACTAACGTGCCG 1107 Query 1343 AGGTGGGCGGTTGGACCGTCGTTGGTGATGGTTGGTGTGATGATGATGGGAGTTGTAAAA 1402 ||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1108 AGGTGGGCGGTCGGGCCGTCGCTGGTGATGGTTGGTGTGATGATGATGGGAGTTGTAAAA 1167 Query 1403 GATATTAGATGGGGAGAGACTAAAGAAGCCGTGACAGCATTTGTAACGATCTTGCTTATG 1462 ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| Sbjct 1168 GATATTAGATGGGGAGAGATTAAAGAAGCCGTGACGGCATTTGTAACGATCTTGCTTATG 1227 Query 1463 CCGTTGACTTATTCCATTGCTAATGGGATTATTGCTGGTATTGGTATATATCTTGCAT-T 1521 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | | Sbjct 1228 CCGTTGACTTATTCCATTGCTAATGGGATTATAGCTGGTATTGGTATATATCTTGC-TCT 1286 Query 1522 AAGCATGTACGATGTCGTTTTGGGAGTTGCAAAATGGCTTAACGGGGTTAGAAAACGGGT 1581 ||||||||||||||||||||||||||||||||| | |||||| |||||||| |||||||| Sbjct 1287 AAGCATGTACGATGTCGTTTTGGGAGTTGCAAAGTTGCTTAATGGGGTTAGGAAACGGGT 1346 Query 1582 TATGAGAGAGCATAATCAAGTTTCTTCCGTCGCTACCGTCGAGATCGTTTGATTATTAAC 1641 |||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||| || Sbjct 1347 TATGAGAGAGCATAATCAAGTTTCCTCCGTTGCTACCGTCTAGATCGTTTGATTATTGAC 1406 Query 1642 GATAACCGATGTCA-CAAAACTGGTTTTAGTGGTGTGTGAGTGTGTACCG-GAACTGGTG 1699 |||||||||||||| |||| | |||||||||||||||||||||| |||| || ||||| Sbjct 1407 GATAACCGATGTCATCAAACC-GGTTTTAGTGGTGTGTGAGTGT--ACCGTGAG-TGGTG 1462 Query 1700 GAATTTTTCACATGGTCGGTCGTTGGATGACCAT-GCAAAGACCCGTCATGAATGCTCTC 1758 ||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||| Sbjct 1463 GAACTTTTCACATGGTCGGTCGTTGGATGACCAAAG-AAAGACCCGTCATGAATGCTCT- 1520 Query 1759 GGTGtttttttttctctttcttttactttcttgttgttttggtttagtttgCGTAGGAGA 1818 | || |||| || | |||||||||||||||||||||||| Sbjct 1521 --T-TTATTTT--CT-T---------------GTTGTTTTGGTTTAGTTTGCGTAG---- 1555 Query 1819 GAGTAGTGAAGTAACATTGGATGCATCAGCTGCCATGAACGTGTGTTTGATAATTTCTTG 1878 |||||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct 1556 ---TAGTGAAGTAACATTGGATGCATCAGCTGCCATGAACGTGTGTTTGATAATT-CATG 1611 Query 1879 GCTGCTTGTGCATGCATTGTTTCTACTTTGTAGGGTTCTATTGTTTCAACTAAATGCTTC 1938 |||||||||||||||||||||| || ||| | | ||||||||||| Sbjct 1612 GCTGCTTGTGCATGCATTGTTT-------GT----TTC-A-------A-CTAAATGCTTC 1651 Query 1939 TTTTGTTTGTAGCATATATGTCAATCAAAGACTTCTGAGTCCTTCAGAAATTG 1991 ||||||||||||||||||| ||| |||||||||| ||||||||||| |||||| Sbjct 1652 TTTTGTTTGTAGCATATATTTCAGTCAAAGACTTTTGAGTCCTTCAAAAATTG 1704 Score = 636 bits (344), Expect = 0.0 Identities = 424/463 (92%), Gaps = 4/463 (1%) Strand=Plus/Plus Query 176 GCTGCGACCGCCACATTCCTCACCATGGCTTATATCATTACCGTGAACGCCAATATCTTA 235 ||||| ||||| ||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct 116 GCTGCAACCGCTACATTCCTCACCATGGCTTAT-TCATTACCGTCAACGCCAATATCTTA 174 Query 236 GCCGACTCCGGTGCCACTTGCTCCATCAACGACTGTTCCACCGTGGCCAGTTCTTCACCA 295 ||||||||||| || ||||||||| || ||||||||||||||||| || ||||||||||| Sbjct 175 GCCGACTCCGGCGCGACTTGCTCCTTCCACGACTGTTCCACCGTGTCCGGTTCTTCACCA 234 Query 296 CCCGGTCCAGAATGCGTCCTCGGGTCTAACCCTGGCTACGAACAATGTATTTCTAGGGTT 355 || ||||||||||||||||| || |||||||||||||||||| ||||| || |||||||| Sbjct 235 CCGGGTCCAGAATGCGTCCTTGGTTCTAACCCTGGCTACGAAGAATGTCTTGCTAGGGTT 294 Query 356 AAAAAGGACCTCGTTGTGGCTACTTCTTTATCAGCCATGGTGGGTTCATTAGCAATGGGT 415 |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| Sbjct 295 AAAAAGGACCTCGTTGTGGCTA---CTTTATCAGCCATGGTTGGTTCATTAGCAATGGGT 351 Query 416 TTGTTAGCTAATCTCCCTTTTGGACTTGCTCCGGGTATGGGAGCCAACGCTTACATCGCA 475 ||||| |||||||| |||||||||||||||||||||||||| ||||||||| |||||||| Sbjct 352 TTGTTCGCTAATCTACCTTTTGGACTTGCTCCGGGTATGGGCGCCAACGCTCACATCGCA 411 Query 476 TACAACGTTGTCGGGTTTCGTGGATCCGGTTCTATCTCTTATCATACCGCTATGGCCATT 535 ||||||||||||||||||||||| |||||||| |||||||| ||||| ||||||||||| Sbjct 412 TACAACGTTGTCGGGTTTCGTGGCTCCGGTTCAATCTCTTACCATACGGCTATGGCCATC 471 Query 536 GTGCTCCTTGAAGGATGTGCCTTTCTCGCTGTGTCGGCTTTAGGACTCCGCGGGAAACTT 595 ||||| ||||| ||||| || |||||||| ||||| ||||||||||||||||||||||| Sbjct 472 GTGCTGCTTGAGGGATGCGCATTTCTCGCGGTGTCTGCTTTAGGACTCCGCGGGAAACTG 531 Query 596 GCTCGTCTCATCCCTCAAACGGTGAGACTGGCCTGCGCGGTCG 638 ||| ||||||||||||||||||||||||| |||||| |||||| Sbjct 532 GCTTGTCTCATCCCTCAAACGGTGAGACTAGCCTGCACGGTCG 574 Score = 207 bits (112), Expect = 2e-52 Identities = 131/140 (94%), Gaps = 1/140 (1%) Strand=Plus/Plus Query 674 ATGAACCAGGGCATTGGCCTCGTGGGACCGGATAAGTCAACTCTAGTGACATTAACCGCC 733 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| | Sbjct 575 ATGAACCAGGGCATTGGGCTCGTGGGACCGGAAAAGTCAACTCTAGTGACATTAACCG-C 633 Query 734 TGCGCAGAGACGGATCCTGTCACTGGAGCTTGCTTAGGAGGTAAAATGAAGAGTCCTACG 793 || |||||||||||| ||||||||||| ||||||| ||||| |||||||||||||||||| Sbjct 634 TGTGCAGAGACGGATTCTGTCACTGGAACTTGCTTGGGAGGGAAAATGAAGAGTCCTACG 693 Query 794 TTTTGGTTAGCCGTTGTCGG 813 |||||||||||||| ||||| Sbjct 694 TTTTGGTTAGCCGTCGTCGG 713 Score = 108 bits (58), Expect = 2e-22 Identities = 67/71 (94%), Gaps = 1/71 (1%) Strand=Plus/Plus Query 844 GAACGTC-AAAGGTAGTATGATTTACGGAATCGTGTTCGTCACGGCTATTTCTTGGATTA 902 ||||||| ||||||||||||||||||||||||||||| || |||||| |||||||||||| Sbjct 713 GAACGTCAAAAGGTAGTATGATTTACGGAATCGTGTTTGTTACGGCTGTTTCTTGGATTA 772 Query 903 GAGGCACTCAA 913 ||||||||||| Sbjct 773 GAGGCACTCAA 783 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 77361287595 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5