BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G51060.1
Length=3174
Score E
Sequences producing significant alignments: (Bits) Value
Ahg495172 jgi|Araly1|495172|fgenesh2_kg.8__988__AT5G51060.1 4505 0.0
Ahg492327 jgi|Araly1|492327|fgenesh2_kg.7__1760__AT4G25090.1 1321 0.0
Ahg916132 jgi|Araly1|916132|Al_scaffold_0008_883 518 1e-145
Ahg470991 jgi|Araly1|470991|fgenesh2_kg.1__945__AT1G09090.2 78.7 2e-13
> Ahg495172 jgi|Araly1|495172|fgenesh2_kg.8__988__AT5G51060.1
Length=3038
Score = 4505 bits (2439), Expect = 0.0
Identities = 2827/3013 (94%), Gaps = 31/3013 (1%)
Strand=Plus/Plus
Query 52 AATATTTTCCCGGAAAAATTCTCTCATTTTCTCGGGAAAAATGTTGT-CTCTGCGTTTAC 110
||||||||||||||||| |||||||||||||||||| |||||||| | |||||| |||||
Sbjct 1 AATATTTTCCCGGAAAATTTCTCTCATTTTCTCGGG-AAAATGTT-TACTCTGCCTTTAC 58
Query 111 AAAATTTTCCTCTAAAAAAGTAGTGAGAGATTCCATAAGACC-ATAA-CCAGTAGA-CAA 167
|||| |||||||| || |||||||||||||||| | ||| | || || ||| |
Sbjct 59 AAAA-TTTCCTCT---GAATTAGTGAGAGATTCCAT-A-ACCAAAAATGCAAAAGATGAG 112
Query 168 CAAATTCTTCATCATTTTGTGTCTCTTG-TTTGA-GATCCCGGTGAAATTTAG-CGGCGA 224
||||| ||||||||| || ||||| ||| | | |||||| | ||||| ||||||
Sbjct 113 TTAATTCGCCATCATTTTCCGTTTCTTGATTT-ACTTTACCGGTG-ACTTTAGACGGCGA 170
Query 225 CGAGAAAATTTTCAGGTAGAGTGTGTTAAAAAATGTCTAGAGTGAGTTTTGAAGTGTCAG 284
||| ||||||||| ||||||||| | |||||||| |||||||||||||||||||||||
Sbjct 171 GGAG-AAATTTTCAAGTAGAGTGT-TGAAAAAATGAATAGAGTGAGTTTTGAAGTGTCAG 228
Query 285 GAGGCTATCACTCTGATGCAGAAGCCGGAAACAGCGGACCAATGAGCGGTGGTCAATTAC 344
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 229 GAGGCTATCACTCTGATGCAGAAGCCGGAAACAGCGGTCCAATGAGCGGTGGTCAATTAC 288
Query 345 CACCGATCTATAAAAAACCGGGGAACTCCAGATTCACTGCTGAGAACAGTCAGAGAACAC 404
|||||||||||||||| |||| ||||||||||||||| || ||||||||||| |||||||
Sbjct 289 CACCGATCTATAAAAAGCCGGCGAACTCCAGATTCACGGCGGAGAACAGTCAAAGAACAC 348
Query 405 GT--A-CGGCACCATACGTGGACCTCACGGTAGATGTACAAGACGATACAGTCTCTGTAC 461
|| | |||| ||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct 349 GTACAGCGGCGCCATACGTGGACCTCACGGTAGATGTACAAGACGACAGAGTCTCTGTAC 408
Query 462 ATAGCTTGAAAATGGAAGGTGGATCTAGCGTTGAAGAGAGTCCGGAGCTTACTTTGCTGA 521
| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 409 ACAGCTTGAAAATGGAAGGTGGATCTAGCGTTGAAGAGAGTCCGGAGCTTACGTTGCTGA 468
Query 522 AACGAAACCGTCTTGAGAAGAAAACAACGGTGGTGAAACGTTTGGCGTCTGTTTCTCACG 581
|||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct 469 AACGGAACCGTCTTGAGAAGAAAACAACGGTGGTGAAACGTTTGGCCTCTGTTTCTCATG 528
Query 582 AGCTTAAGCGTTTGACATCTGTTTCTGGTGGTATTGGTGGAAGAAAGCCGCCTCGACCGG 641
||||||| || |||||||| ||||||||| || ||||||| |||||||| ||||||||||
Sbjct 529 AGCTTAAACGCTTGACATCGGTTTCTGGTAGTGTTGGTGGGAGAAAGCCACCTCGACCGG 588
Query 642 CTAAGTTAGACCGGACTAAATCCGCCGCGAGTCAAGCGTTGAAGGGACTTAAGTTCATTA 701
|||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct 589 CTAAGTTAGACCGGACTAAATCCGCCGCAACTCAAGCGTTGAAGGGACTTAAGTTCATTA 648
Query 702 GTAAAACCGACGGTGGCGCCGGTTGGTCTGCCGTGGAGAAGCGGTTTAATCAGATTACCG 761
||||||| ||||||||||| || ||| ||||||||||||| ||||||||||||| ||||
Sbjct 649 GTAAAACTGACGGTGGCGCGGGCTGGAGTGCCGTGGAGAAGAGGTTTAATCAGATCACCG 708
Query 762 CGACTACCGGTGGACTACTTCTTCGGACAAAGTTCGGTGAATGCATAGGAATGACTTCAA 821
|||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct 709 CGACTACCGGTGGACTACTTGTTCGGACAAAGTTCGGTGAATGCATAGGGATGACTTCAA 768
Query 822 AGGATTTTGCTTTGGAACTGTTTGATGCATTGGCTAGAAGAAGGAATATAACAGGGGAAG 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 769 AGGATTTTGCTTTGGAACTGTTTGATGCATTGGCTAGAAGAAGGAATATAACAGGGGAAG 828
Query 882 TGATTGATGGAGATCAACTAAAGGAGTTTTGGGAACAAATTAATGATCAAAGTTTTGATT 941
|||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct 829 TGATTGATGGAGATCAACTAAAGGAGTTTTGGGAACAAATCAATGATCAAAGTTTCGATT 888
Query 942 CTCGGCTTAAGACATTCTTTGACATGGTGGATAAAGATGCTGATGGTAGACTTACAGAAG 1001
| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 889 CCCGGCTTAAAACATTCTTTGACATGGTGGATAAAGATGCTGATGGTAGACTAACAGAAG 948
Query 1002 ACGAAGTTAGAGAGATTATCAGTCTTAGTGCTTCTGCGAATAATCTATCTACAATACAGA 1061
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 949 ACGAAGTTAGAGAGATTATCAGTCTTAGTGCTTCTGCGAATAATCTATCTACAATCCAGA 1008
Query 1062 AGAGAGCTGATGAATATGCAGCATTGATCATGGAAGAGTTGGATCCAGACAATATAGGAT 1121
||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 1009 AGAGAGCTGATGAATATGCAGCACTGATCATGGAAGAGCTGGATCCAGACAATATAGGAT 1068
Query 1122 ACATCATGTTGGAGAGTCTTGAGACTCTGCTTTTGCAAGCGGCAACACAGTCTGTGATAA 1181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1069 ACATCATGTTGGAGAGTCTTGAGACTCTGCTTTTGCAAGCGGCAACACAGTCTGTGATAA 1128
Query 1182 CAAGTACTGGGGAGAGAAAGAATCTGAGTCATATGATGAGTCAGAGGCTTAAGCCTACGT 1241
|||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct 1129 CAAGTACTGGGGAGAGAAAGAATCTGAGCCATATGATGAGTCAGAGGCTTAAGCCAACGT 1188
Query 1242 TTAACCGCAACCCGTTGAAGCGATGGTACCGTGGTCTTAGATTCTTCTTGTTAGACAACT 1301
|||||||||| || || ||||||||||||||||| |||||||||||| ||||||||||||
Sbjct 1189 TTAACCGCAATCCATTAAAGCGATGGTACCGTGGCCTTAGATTCTTCGTGTTAGACAACT 1248
Query 1302 GGCAAAGATGTTGGGTTATAGTGCTATGGTTCATAGTTATGGCTATACTCTTCACCTACA 1361
|| ||||||| ||||||||||| |||||| |||||||||||||||| |||||||||||||
Sbjct 1249 GGAAAAGATGCTGGGTTATAGTACTATGGCTCATAGTTATGGCTATCCTCTTCACCTACA 1308
Query 1362 AATATATCCAATACAGGCGTAGCCCT-GTGTATCCAGTGATGGGTGATTGTGTGTGCATG 1420
|||| ||||| |||| |||||| ||| |||||| ||||||||||||||||||| ||||||
Sbjct 1309 AATACATCCAGTACAAGCGTAG-CCTGGTGTATGCAGTGATGGGTGATTGTGTATGCATG 1367
Query 1421 GCTAAAGGTGCTGCAGAAACAGTGAAGCTGAACATGGCTTTGATTCTCTTACCTGTTTGT 1480
|| |||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct 1368 GCCAAAGGTGCAGCAGAAACAGTTAAGCTGAACATGGCTTTAATTCTCTTACCTGTTTGT 1427
Query 1481 AGAAACACCATCACATGGCTTAGAAATAAGACCAGGTTGGGTCG-TGTTGTCCCATTTGA 1539
||||||||||||||||||||||| |||||||||||||||||| | |||||||||||||||
Sbjct 1428 AGAAACACCATCACATGGCTTAGGAATAAGACCAGGTTGGGT-GTTGTTGTCCCATTTGA 1486
Query 1540 TGACAATCTCAACTTCCACAAGGTTATAGCGGTGGGGATTATAGTTGGAGTAACGATGCA 1599
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1487 TGATAATCTCAACTTCCACAAGGTTATAGCGGTGGGGATTATAGTTGGAGTAACGATGCA 1546
Query 1600 CGCCGGGGCACATTTAGCGTGTGATTTCCCGCGGTTACTACATGCAACTCCAGAGGCATA 1659
||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||
Sbjct 1547 CGCCGGGGCACATTTGGCGTGTGACTTCCCGCGGTTACTACACGCAACTCCAGAGGCATA 1606
Query 1660 TAGGCCTTTAAGACAGTTTTTTGGGGATGAGCAACCAAAGAGCTACTGGCATTTTGTAAA 1719
|||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct 1607 TAGGCCTTTAAGGCAGTTTTTCGGGGATGAGCAACCGAAGAGCTACTGGCATTTTGTAAA 1666
Query 1720 CTCGGTAGAAGGTATAACCGGACTTGTGATGGTTTTGTTAATGGCGATTGCATTCACACT 1779
|||||| |||||||| |||||||| || ||||||||||||||||| ||||||||||||||
Sbjct 1667 CTCGGTGGAAGGTATCACCGGACTCGTAATGGTTTTGTTAATGGCAATTGCATTCACACT 1726
Query 1780 AGCCACGCCTTGGTTCAGAAGAGGGAAGCTAAACTATCTTCCAGGACCATTAAAGAAACT 1839
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1727 AGCCACGCCATGGTTCAGAAGAGGGAAGCTAAACTATCTTCCAGGACCATTAAAGAAACT 1786
Query 1840 AGCTAGCTTCAATGCCTTCTGGTACACTCATCATTTGTTTGTCATAGTCTACATTCTTCT 1899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1787 AGCTAGCTTCAATGCCTTCTGGTACACTCATCATTTGTTTGTCATAGTCTACATTCTTCT 1846
Query 1900 TGTTGCTCATGGATACTACTTGTATCTCACCAGAGACTGGCACAATAAAACGACTTGGAT 1959
|||||||||||| ||||||||||||||||||| |||||||||||| || ||||| |||||
Sbjct 1847 TGTTGCTCATGGGTACTACTTGTATCTCACCAAAGACTGGCACAACAAGACGACATGGAT 1906
Query 1960 GTATTTGGTGGTACCAGTGGTTCTATACGCGTGTGAAAGGTTGATAAGAGCATTCAGGTC 2019
||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||| ||
Sbjct 1907 GTATTTGGTGGCACCAGTGATTCTATACGCGTGCGAAAGGTTGATAAGAGCATTCAGATC 1966
Query 2020 GAGCATCAAGGCGGTGACTATTAGGAAAGTAGCAGTTTATCCAGGAAACGTGCTGGCAAT 2079
|||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct 1967 GAGCATCAAGGCGGTGACTATTAGAAAAGTAGCAGTTTATCCAGGAAACGTGTTGGCAAT 2026
Query 2080 TCACTTGTCAAGGCCTCAAAACTTCAAATACAAGAGTGGTCAATACATGTTTGTTAACTG 2139
|||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2027 TCACTTGTCAAGACCTCAAAACTTCAAATACAAGAGCGGTCAATACATGTTTGTTAACTG 2086
Query 2140 TGCTGCTGTTTCTCCATTTGAATGGCATCCATTTTCAATCACATCTGCACCACAAGATGA 2199
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2087 TGCTGCTGTTTCTCCATTTGAATGGCATCCTTTTTCAATCACATCTGCACCACAAGATGA 2146
Query 2200 TTACCTAAGTGTTCACATTAGAGTTCTTGGGGATTGGACACGAGCTCTCAAAGGAGTCTT 2259
|||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct 2147 TTACCTAAGTGTTCACATTAGAGTTCTTGGGGATTGGACAAGGGCTCTCAAAGGAGTCTT 2206
Query 2260 CTCTGAGGTGTGTAAGCCACCACCGGCAGGAGTTAGTGGTCTGCTTAGAGCCGACATGTT 2319
||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct 2207 CTCTGAGGTGTGTAAGCCACCTCCGGCAGGAGTTAGTGGTCTGCTCAGAGCCGACATGTT 2266
Query 2320 GCATGGTGCAAATAATCCCGACTTCCCGAAAGTCTTGATTGATGGTCCATATGGTGCACC 2379
|||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||
Sbjct 2267 GCATGGTGCAAATAATCCTGACTTCCCGAAAGTCTTGATCGATGGTCCATACGGTGCACC 2326
Query 2380 AGCACAAGACTACAAGAAGTACGAGGTGGTTCTACTAGTTGGTCTCGGGATTGGAGCCAC 2439
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct 2327 AGCACAAGACTACAAGAAATACGAGGTGGTTCTACTAGTTGGTCTCGGGATTGGAGCAAC 2386
Query 2440 ACCAATGATCAGTATCGTCAAAGACATTGTTAATAACATCAAGGCCAAGGAACAAGCCCA 2499
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2387 ACCAATGATCAGTATCGTCAAAGACATTGTTAACAACATCAAGGCCAAGGAACAAGCCCA 2446
Query 2500 ACTAAACCGAATGGAGAATGGAACAAGCGAACCACAACGAAGTAAGAAAGAGAGTTTCAG 2559
||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2447 ACTCAACCGAATGGAGAATGGAACAAGCGAACCACAACGAAATAAGAAAGAGAGTTTCAG 2506
Query 2560 GACCCGTAGAGCTTACTTCTATTGGGTTACGCGTGAGCAAGGCTCTTTCGATTGGTTCAA 2619
||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2507 GACACGTAGGGCTTACTTCTATTGGGTTACCCGTGAGCAAGGCTCTTTCGATTGGTTCAA 2566
Query 2620 GAACATAATGAACGAAGTCGCGGAACGAGATGCCAACCGCGTCATCGAAATGCATAACTA 2679
|||||| |||||||||||||||||||||||| |||||||| ||||||| |||||||| ||
Sbjct 2567 GAACATCATGAACGAAGTCGCGGAACGAGATACCAACCGCATCATCGAGATGCATAATTA 2626
Query 2680 TTGTACAAGTGTCTATGAAGAAGGTGACGCTCGTTCCGCACTTATACATATGCTTCAATC 2739
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 2627 TTGTACAAGTGTCTATGAAGAAGGAGACGCTCGTTCCGCACTTATACATATGCTTCAGTC 2686
Query 2740 ACTAAACCATGCAAAGAACGGCGTCGACATTGTCTCTGGAACAAGAGTTATGTCCCATTT 2799
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 2687 ACTAAACCATGCAAAGAACGGCGTTGACATTGTCTCTGGAACAAGGGTTATGTCCCATTT 2746
Query 2800 CGCTAAACCTAATTGGAGAAATGTTTACAAGCGTATAGCTATGGATCATCCTAACACCAA 2859
|||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||
Sbjct 2747 CGCTAAACCTAATTGGAGAAATGTTTACAAACGTATAGCTATGGATCACCCTAACTCCAA 2806
Query 2860 AGTTGGAGTGTTTTACTGTGGAGCACCAGCATTGACAAAGGAGCTAAGGCATCTAGCTTT 2919
|||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2807 AGTTGGAGTGTTCTACTGTGGAGCACCAGCATTGACAAAGGAGCTAAGGCATTTAGCTTT 2866
Query 2920 AGATTTCACCCACAAAACAAGCACCAGATTCTCCTTCCACAAAGAGAATTTCTAAAGGAC 2979
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2867 AGATTTCACCCACAAGACAAGCACCAGATTCTCCTTCCACAAAGAGAATTTCTAAAGGAG 2926
Query 2980 ACACAGAGTTAAAAGGCCTAAACaaaaaaaaTAAAAGAAAGAAGCATGAG-TTA-T-TAT 3036
| ||||||||||||||| ||| ||||| || ||||||| |||||||| ||| | |||
Sbjct 2927 AAACAGAGTTAAAAGGCATAAGCAAAAGAAG-AAAAGAA-GAAGCATGCCCTTACTATAT 2984
Query 3037 GTTTTTCGTAATT 3049
|||||| |||||
Sbjct 2985 TTTTTTCTTAATT 2997
> Ahg492327 jgi|Araly1|492327|fgenesh2_kg.7__1760__AT4G25090.1
Length=2703
Score = 1321 bits (715), Expect = 0.0
Identities = 1841/2369 (78%), Gaps = 139/2369 (6%)
Strand=Plus/Plus
Query 672 GTCAAGCGTTG-AAGGGACTTAAGTTCATTAGTAAAACCGACGGTGGCGCCGGTTGGTCT 730
|||| || ||| ||||| || ||| |||||||||| |||||||| ||| | ||| |
Sbjct 299 GTCAGGCCTTGAAAGGG-CTCAAGCTCATTAGTAAGACCGACGGCAACGCTGCCTGGACG 357
Query 731 GCCGTGGAGAAGCGGT--TTAATCAGATTACCGCGACTACCGGTGGACTACTTCTTCGGA 788
| |||||||||||||| || | |||| || || | ||| | |||| | || ||||||
Sbjct 358 GTCGTGGAGAAGCGGTACTTGA--AGATCACGGCCAATACTGATGGATTGCTGCTTCGGT 415
Query 789 CAAAGTTCGGTGAATGCATAGGAATG-ACTTCAAAGGATTTTGCTTTGGAACTGTTTGAT 847
|||| ||||||||||||||||| ||| || ||||| || ||||| |||||| |||| ||
Sbjct 416 CAAAATTCGGTGAATGCATAGGGATGAAC-TCAAAAGAATTTGCCTTGGAATTGTTCGAC 474
Query 848 GCATTGGCTAGAAGAAGGAATAT-AACAGGGGAAGTGATTGA-TGGAGATC-AACTAAAG 904
||||| ||||||| ||| | | || |||||| |||||| | | |||| | | | |||
Sbjct 475 GCATTAGCTAGAAAAAGTCACCTGAA-AGGGGATGTGATT-ACT-GAGACCGAGTTGAAG 531
Query 905 GAGTTTTGGGAACAAATTAATGATCAAAGTTTTGATTCTC-GGCTTAAGACATTCTTTGA 963
| |||||||||||||| |||||| |||| |||||||| | |||||| || ||||||||
Sbjct 532 AAATTTTGGGAACAAATAAATGATAAAAGCTTTGATTC-CAGGCTTATCACGTTCTTTGA 590
Query 964 CATGGTGGATAAAGATGCTGATGGTAGACTTACAGAAGACGAAGTTAGAGAGATTATCAG 1023
| || |||||||||| || ||||||||||| || ||||| |||||||||||||| ||||
Sbjct 591 CTTGATGGATAAAGACGCCGATGGTAGACTAACCGAAGATGAAGTTAGAGAGATCATCAA 650
Query 1024 TCTTAGTGCTTCTGCGAATAATCTATC-TACAATACAG-AAGAGAGCTGATGAATATGCA 1081
||||||| | ||||| || |||| || | | || ||| || || || ||||||||||||
Sbjct 651 TCTTAGTTCGTCTGCCAACCATCTGTCATGC-ATCCAGAAAAAG-GCAGATGAATATGCA 708
Query 1082 GCATTGATCATGGAAGAG-TTGGATCCAGA-CAATATAGGATACATCATGTTGGAGAGTC 1139
||| |||| ||||||||| || || || || | |||| |||||||||||| |||||||||
Sbjct 709 GCAATGATAATGGAAGAGCTT-GACCCTGATC-ATATGGGATACATCATGATGGAGAGTC 766
Query 1140 TTGAG-ACTCTGCTTTTGCAAGCGGCAACACAGTCTGT--G-ATAAC-AAGTACTGGGGA 1194
|| || | | ||||| ||||||||| |||| | ||| | | | ||| || || || ||
Sbjct 767 TTAAGAAAT-TGCTTCTGCAAGCGGAAACAAAATCTTTAAGCACAACTAA-TAGTGAAGA 824
Query 1195 GAGAAAGAATCTGAGTC-ATATGATGAGTCAGAGGCTTAAGCCTACGTTTAACCGC-AAC 1252
|||||| | ||||| | ||||| | ||| |||| |||||||||||| | ||| | |||
Sbjct 825 AAGAAAGGAGCTGAG-CGATATGCTAAGTGAGAGTCTTAAGCCTACGCGTGACC-CTAAC 882
Query 1253 CCGTTGAAGCGATGGTACCGTGGTCTTAGATTCTTCTTGTTAGACAACTGGCAAAG-ATG 1311
| |||| | ||||||||||| || ||||||||| | | || | ||||||||| ||
Sbjct 883 CATTTGAGGAGATGGTACCGTCAACTAAGATTCTTCGTACTGGATAGCTGGCAAAGAAT- 941
Query 1312 TTGGGTTATAGTGCTATGGTTCATAG-TTATGGCTATACTCTTCACCTACAAATATATCC 1370
|||||| |||| | ||||| || | ||||||| || |||||| | ||||||||||| |
Sbjct 942 TTGGGTGATAGCGTTATGGCTC-GCGATTATGGCCATCCTCTTCGCGTACAAATATATTC 1000
Query 1371 AATACAGGCGTAGCCCTGTGTATCCAGTGATGGGTG-ATTGTGTGTGCATGGCTAAAGGT 1429
|||||| | ||| | |||||| ||| |||| | |||||||||| |||||||||||
Sbjct 1001 AATACAAGAATAGAGCAGTGTATGAAGTCTTGGG-GCCTTGTGTGTGCTTGGCTAAAGGT 1059
Query 1430 GCTGCAGAAACAG-TGAAGCTGAACATGGCTTTGATTCTCTTACCTGTTTGTAGAAACAC 1488
|| ||||| || | ||||||| |||||||| || ||||| |||||||| || ||||| ||
Sbjct 1060 GCAGCAGAGAC-GTTGAAGCTAAACATGGCCTTAATTCTGTTACCTGTATGCAGAAATAC 1118
Query 1489 CATCACATGGCTTAGAAATAAGAC---CAGGTTGGGTCG-TGTTGTCCCATTTGATGACA 1544
|||||||||||||||||||||||| | |||||||| | | ||||||| ||||||||||
Sbjct 1119 CATCACATGGCTTAGAAATAAGACTAGCTGGTTGGGT-GTTTTTGTCCCTTTTGATGACA 1177
Query 1545 ATCTCAACTTCCACAAGGTTATAGCGGTGGGGATTATAG-TTGGAGTAACG-ATGCACGC 1602
| ||||| || || ||||||||||||||||| |||| | | ||||| | | || |||
Sbjct 1178 ACCTCAATTTTCATAAGGTTATAGCGGTGGGAATTA-CGATAGGAGT-AGGCATACAC-T 1234
Query 1603 CGG-GGCACATTTAGCGTGTGATTTCCCGCGGTTACT-ACATGCAACTCCAGAGGC-ATA 1659
||| ||| || || || |||||||| || ||| || | || |||||||||| || |||
Sbjct 1235 CGGTGGCCCACTTGGCATGTGATTTTCCACGGCTAATCGCA-GCAACTCCAG-CGCAATA 1292
Query 1660 TAGGCCT-TTAAGACAGTTTTTTGGGGATGAGCAACCAAAGAGCTACTGGCATTTTGTAA 1718
| |||| | ||| | || || ||||| |||||||||||||| |||| ||||||||| |
Sbjct 1293 CATGCCTCTCGAGA-AATTCTTCGGGGAGGAGCAACCAAAGAGGTACTTGCATTTTGTGA 1351
Query 1719 ACTCGGTAGAAGGTATAACCGGACTTGTGATGGTTTTGTTAATGGCGATTGCATTCACAC 1778
| || |||||| ||||| || ||||| ||||| | || |||| ||||| || ||||
Sbjct 1352 AGTCAACAGAAGGAATAACAGGGCTTGTAATGGTCCTCTTGATGGTTATTGCTTTTACAC 1411
Query 1779 TAGCCACGCCTTGGTTCAGAAGAGGGAAGCT---AAACTATCTTCCAGGACCATTAAAGA 1835
| || | ||||||||| ||| |||||||||| ||| | |||||||| ||| ||||||
Sbjct 1412 TGGCTATGCCTTGGTTTAGACGAGGGAAGCTAGAAAAAAAGCTTCCAGGGCCACTAAAGA 1471
Query 1836 AACTAGCTAGCTTCAATGCCTTCTGGTACACTCATCATTTGTTTGTCATAGTCTACATTC 1895
|||| || |||||||| ||||||||||||||||| ||||||||||| |||||||||||||
Sbjct 1472 AACTCGCGAGCTTCAACGCCTTCTGGTACACTCACCATTTGTTTGTTATAGTCTACATTC 1531
Query 1896 TTCTTGTTGC-TCATGGATACTACTTGTATCTCA-CCAGAGACTGGCACAATAAAACGAC 1953
| |||| | | ||| |||||||||||||| |||| || || ||| |||| ||||||||
Sbjct 1532 TACTTG-TCCTTCACGGATACTACTTGTACCTCAGTAAG-GAATGGTACAAGAAAACGAC 1589
Query 1954 TTGGATGTATTTGGTGGTACCAGTGGTTCTATACGCGTGTGAAAGGTTGATAAGAGCATT 2013
|||||||| |||| |||||||| | ||| || || | || || |||||| |||||||
Sbjct 1590 GTGGATGTACTTGGCAGTACCAGTAGCTCTCTATGCATACGAGAGATTGATACGAGCATT 1649
Query 2014 CAGGTCGAGCATCAAGG-CGGTGACTA-TTAGGAAAGTAGCAGTTTATCCAGGAAACGTG 2071
|||||| |||||| ||| | || | | || || || || | |||||| ||||| ||
Sbjct 1650 CAGGTCCAGCATC-AGGACTGT-AAAAGTTCTTAAGGTCGCGGCTTATCCGGGAAAAGTA 1707
Query 2072 CTGGCAATT-CACTTGTCAAGGCCTCA-AAACTTCAAATACAAGAGTGGTCAATACATGT 2129
|| | || || |||||| |||| | |||||||||||||||||| |||||||||||||
Sbjct 1708 TTGAC-TTTGCAAATGTCAAAGCCT-ACAAACTTCAAATACAAGAGCGGTCAATACATGT 1765
Query 2130 TTGTTAACTGTGCTGCTGTTTCTCCATTTGAATGGCATCCATTTTCAATCACATCTGCAC 2189
|||| || ||| | || || || || ||||| ||||||||||||||||| || || |||
Sbjct 1766 TTGTAAATTGTCCAGCAGTCTCACCGTTTGAGTGGCATCCATTTTCAATAACTTCAACAC 1825
Query 2190 CACAAGATGATTACCTAAGTGTTCACATTAGAGTTC-TTGGG-GATTGGACACGA-GCTC 2246
||||||| || || || || ||||| | || | || |||| ||||||||| || |||
Sbjct 1826 CACAAGAAGACTATCTGAGCGTTCATA-TA-AAATCACTGGGAGATTGGACA-GAGGCTA 1882
Query 2247 TCAAAGGAGTCTTCTCTGAGGTGTGTAAGCCACCACCGGCAGGAGTTAGTGGTCTGCTTA 2306
|| ||||||| ||||| ||||||| ||||||||| | | |||| |
Sbjct 1883 TCCAAGGAGTTTTCTCCGAGGTGTCTAAGCCACC-TC--C----------GGTC-G---- 1924
Query 2307 GAGCCGACATGTTGCATGGTGCAAATAATCCCGACTT-CCCGAAAGTCTTGATTGATGGT 2365
|| |||||||||||||||||||||| ||||| || ||| ||| | | ||||||||||
Sbjct 1925 GA---GACATGTTGCATGGTGCAAATAGTCCCGGTTTTCCCAAAATTAT-GATTGATGGT 1980
Query 2366 CCATATGGTGCACCAGCACAAGACTACAAGAAGTACGAGGTGGTTCTACTAGTT-GGTCT 2424
|| || || |||||||| ||||||||||||||||||||||||||||| || | | |||||
Sbjct 1981 CCGTACGGCGCACCAGCTCAAGACTACAAGAAGTACGAGGTGGTTCTGCT-GATCGGTCT 2039
Query 2425 CGGGATTGGAGCCACACCAATGATCAGTATCGTCAAAGACATTGTTAATAACATCA-AGG 2483
|| ||||||||||| || |||||||| || |||| |||||| | || || | | ||
Sbjct 2040 TGGCATTGGAGCCACCCCGATGATCAGCATTATCAAGGACATTATCAACAATA-CGGAGA 2098
Query 2484 CCAAGGAACAAGCCCAACTAAACCGA-ATGGAGAATGGAACAAGCGAACCACAACGAAGT 2542
||||||| || || || | ||| || | || | | | || | || | | | | ||||
Sbjct 2099 CCAAGGAGCA-GCTCAGCCAAATGGAGAAGGGGGCTCCA-CA-G-GAGC-A-A-C-AAGT 2150
Query 2543 -AAGAAAGAGAGTTTCAGGACCCGTAGAGCTTACTTCTATTGGGTTACGC-GTGAGCAAG 2600
|||||||| | ||||| ||| || || ||||||||||| ||||| || | ||||| |
Sbjct 2151 TAAGAAAGAAACTTTCAAGACGCGAAGGGCTTACTTCTACTGGGTAACAAAG-GAGCAGG 2209
Query 2601 GCT-C-TTTCGATTGGTTCAAGAACATAATGAACGA-AGTCGCGGAACGAGATGCCAACC 2657
| | | ||| ||||||||||||||| | |||||||| | | || |||||||| | ||
Sbjct 2210 G-TACATTT-GATTGGTTCAAGAACGTCATGAACGAGATT-GCAGAACGAGA--CAAAA- 2263
Query 2658 GC---GTCATCGAAATGCATAA-CTATTGTACAAGTGTCTATGAAGAAGGTGACGCTCGT 2713
|| ||||| ||| | || || | |||| || |||||||| |||||||| |||| ||||
Sbjct 2264 GCAAAGTCATAGAACTACACAATC-ATTGCACTAGTGTCTACGAAGAAGGAGACGTTCGT 2322
Query 2714 TCCGCACTTATACATATGCTTCAATCACTAAACCATGCAAAGAACGGCGTCGACATTGTC 2773
|||||||| |||| |||||||| || ||||| |||| ||||| || | ||||||||
Sbjct 2323 TCCGCACTCATACGGATGCTTCAGTCTCTAAATTATGCCAAGAATGGTTTAGACATTGT- 2381
Query 2774 T-CTGGAACAAGAGTTATGTCCCATTTCGCTAAACCTAATTGGAGAAATGTTTACAAGC- 2831
| |||| ||||| || |||||||||||||| | ||||||||||| ||| |||||||| |
Sbjct 2382 TGCTGGGACAAGGGTCATGTCCCATTTCGCCAGACCTAATTGGAAAAACGTTTACAAACA 2441
Query 2832 GTATAGCTATGGATCATCCTAACACCAAAGTTGGAGTGTTTTACTGTGGAGCACCAGCAT 2891
| || || |||||||| ||| | || ||||||||||| || ||||||||||| | ||
Sbjct 2442 G-ATTGCCATGGATCACCCTGGTGCTAATGTTGGAGTGTTCTATTGTGGAGCACCGGTAT 2500
Query 2892 TGACAAAGGAGCTAAGGCATCTAGCTTTAGATTTCACCCACAAAACAAGCACCAGATTCT 2951
|||| |||||| |||||||||||||||| || ||||| ||||| ||||| || |||||||
Sbjct 2501 TGACGAAGGAGTTAAGGCATCTAGCTTTGGAATTCACACACAAGACAAGTACTAGATTCT 2560
Query 2952 CCTTCCACAAAGAGAATTTCTAAAGGACA 2980
| |||||||||||||| |||||||| |||
Sbjct 2561 CTTTCCACAAAGAGAACTTCTAAAG-ACA 2588
> Ahg916132 jgi|Araly1|916132|Al_scaffold_0008_883
Length=1893
Score = 518 bits (280), Expect = 1e-145
Identities = 679/868 (78%), Gaps = 41/868 (5%)
Strand=Plus/Plus
Query 1015 GATTATCAGTCTTAGTGCTTCTGCGAATAATCTATCTACAATACAGAAGAGA-GCTGATG 1073
||| || ||||||||| | ||||| || |||| || || ||| || | | | || ||||
Sbjct 21 GATCATTAGTCTTAGTTCGTCTGCCAACCATCTTTCAACCATAAAG-ACAAATGCAGATG 79
Query 1074 AATATGCAGCATTGATCATGGAAGAG-TTGGATC-CAGACAATATAGGATACATCATGTT 1131
|||||||||| |||| ||| ||| | || || | ||| ||||| |||||||||||| |
Sbjct 80 GATATGCAGCAATGATAATGAAAGTGCTT-GA-CAAAGATAATATTGGATACATCATGAT 137
Query 1132 GGAG-AGTCTTGAGACT-C-TGCTTTTGCAAGCGGCAACACAGTCTGTGATAACAAGTAC 1188
|| | |||||| | | | | ||||| || |||| | |||||| || | | |||| |
Sbjct 138 GG-GTAGTCTT-A-AATCCTTGCTTCTGGAAGCTGAAACACATTCCATCAGCACAAACAG 194
Query 1189 TGGGGAGAGAAAGAA-TCTGAGTC-ATATGATGAGTCAGAGGCTTAAGCCTACGTTTAAC 1246
|| || |||||||| | || | | | ||||| ||| | | |||||||||||| || ||
Sbjct 195 TGAAGAAAGAAAGAAGT-TG-GGCGACATGATAAGTAACAAGCTTAAGCCTACACTTGAC 252
Query 1247 CGC-AACCCGTTGAAGCGATGGTACCGTGGTCTTAGATTCTTCTTGTTAGACAACTGGCA 1305
| | |||||||||||| ||||||||| | |||||||||||| | | || ||||||||
Sbjct 253 C-CTAACCCGTTGAAGAGATGGTACCATAAACTTAGATTCTTCGTACTGGATAACTGGCA 311
Query 1306 AAG-ATGTTGGGTTATAGTGCTATGGTTCATAG-TTATGGCTATACTCTTCACCTACAAA 1363
||| || |||||| |||||||||||| |||| | ||||||| || ||||||| ||||||
Sbjct 312 AAGAAT-TTGGGTAATAGTGCTATGGCTCAT-GATTATGGCCATCCTCTTCATATACAAA 369
Query 1364 TATATCCAATACAGGCGTAGCCCTGTGTATCCAGTGATGGGTG-ATTGTGTGTGCATGGC 1422
||||| ||||||| | ||| |||||| |||| |||| | ||||||||||| ||||
Sbjct 370 TATATTCAATACAAGAATAGAGAAGTGTATGAAGTGTTGGG-GCATTGTGTGTGCTTGGC 428
Query 1423 TAAAGGTGCTGCAGAAACAGTGAAGCTGAACATGGCTTTGATTCTCTTACCTGTTTGTAG 1482
||||||||| || || ||| |||||||||||||||| |||||||| |||||||| || ||
Sbjct 429 TAAAGGTGCAGCTGAGACACTGAAGCTGAACATGGCCTTGATTCTGTTACCTGTATGCAG 488
Query 1483 AAACACCATCACATGGCTTAGAAATAAGACCAGGTTGGGTCG-TGTTGTCCCATTTGATG 1541
||| ||||| ||||||||||||| ||| || || |||||| | | ||||||| |||||||
Sbjct 489 AAATACCATTACATGGCTTAGAACTAAAACTAGTTTGGGT-GTTATTGTCCCTTTTGATG 547
Query 1542 ACAATCTCAACTTCCA-CAAGGTTATAGCGGTGGGGATTATAG-TTGGAGTAACGATGCA 1599
|||| |||||||| || | |||||||||||||||| || || | | |||||| | || ||
Sbjct 548 ACAACCTCAACTTTCATC-AGGTTATAGCGGTGGGAATCAT-GATAGGAGTAGCCATACA 605
Query 1600 CGCCGG-GGCACATTTAGCGTGTGATTTCCCGCGG-TTACTACATGCAACTCCAGAGGCA 1657
| ||| | | || || ||||| ||||| || ||| | | | | ||||||||||||| |
Sbjct 606 C-TCGGTGACCCACTTGGCGTGCGATTTTCCACGGCTAATTGC-GGCAACTCCAGAGGAA 663
Query 1658 TATAGGCCTTTAAGACAGTTTTTTGGGGATGAGCAACCAAAGAGCTACTGGCATTTTGTA 1717
|| | |||| || || | || ||||| || |||||||||||||| |||| |||||||||
Sbjct 664 TACATGCCTCTACGAAAATTCTTTGGAGAAGAGCAACCAAAGAGATACTTGCATTTTGTG 723
Query 1718 AACTCGGTAGAAGGTATAACCGGACTTGTGATGGTTTTGTTAATGGCGATTGCATTCACA 1777
|| || |||||| ||||| || || | |||||||| || ||||| ||||| || |||
Sbjct 724 AAGTCAACAGAAGGAATAACAGGGCTCATAATGGTTTTCTTGATGGCAATTGCTTTTACA 783
Query 1778 CTAGCCA-CGCCTTGGTTCAGAAGAGGGAAGCT---AAACTATCTTCCAGGA-CCATTAA 1832
||||| | | |||||||| ||| |||||||||| ||| | |||||| || ||| |||
Sbjct 784 CTAGCTATC-CCTTGGTTTAGACGAGGGAAGCTCGAAAAAAAGCTTCCA-GAGCCACTAA 841
Query 1833 AGAAACTAGCTAGCTTCAATGCCTTCTG 1860
||||||||||||||||||||||||||||
Sbjct 842 AGAAACTAGCTAGCTTCAATGCCTTCTG 869
> Ahg470991 jgi|Araly1|470991|fgenesh2_kg.1__945__AT1G09090.2
Length=2304
Score = 78.7 bits (42), Expect = 2e-13
Identities = 97/124 (78%), Gaps = 2/124 (2%)
Strand=Plus/Plus
Query 2360 GATGGTCCATATGGTGCACCAGCACAAGACTACAAGAAGTACGAGGTGGTT-CTACTAGT 2418
||||||||||||||||||||||||||||| ||| | | ||||| || || || || ||
Sbjct 1677 GATGGTCCATATGGTGCACCAGCACAAGATTACCGGCACTACGATGTA-TTGCTTCTGGT 1735
Query 2419 TGGTCTCGGGATTGGAGCCACACCAATGATCAGTATCGTCAAAGACATTGTTAATAACAT 2478
||||| ||||| ||||| || ||| | ||||| || ||| ||| | |||| |||||
Sbjct 1736 AGGTCTAGGGATCGGAGCGACGCCATTAATCAGCATAATCAGGGACGTCCTTAACAACAT 1795
Query 2479 CAAG 2482
||||
Sbjct 1796 CAAG 1799
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 119908091260
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5