BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G51690.1
Length=3179
Score E
Sequences producing significant alignments: (Bits) Value
Ahg949712 jgi|Araly1|949712|scaffold_801599.1 2401 0.0
Ahg949711 jgi|Araly1|949711|scaffold_801598.1 1498 0.0
Ahg926202 jgi|Araly1|926202|scaffold_201763.1 632 4e-180
Ahg343780 jgi|Araly1|343780|fgenesh1_pg.C_scaffold_4000122 534 1e-150
Ahg891256 jgi|Araly1|891256|Al_scaffold_0007_3242 527 2e-148
Ahg887541 jgi|Araly1|887541|Al_scaffold_0891_2 348 2e-94
Ahg937748 jgi|Araly1|937748|scaffold_501939.1 342 8e-93
> Ahg949712 jgi|Araly1|949712|scaffold_801599.1
Length=1536
Score = 2401 bits (1300), Expect = 0.0
Identities = 1460/1538 (95%), Gaps = 8/1538 (1%)
Strand=Plus/Plus
Query 64 CTATCTCCGCGGCGGAGCATTTTCCGATGAGGTTGATAGTACCTCTCCGTGGAGTAATTC 123
||||| |||||||||||| |||||||||||| ||||||||||||||||||| ||||| |
Sbjct 3 CTATCGCCGCGGCGGAGCCGTTTCCGATGAGGCTGATAGTACCTCTCCGTGGCGTAATCC 62
Query 124 AAGGCCGTGGTGGTCTCTTCGTCGGCTCTCTCATTCCTTGTTGTCTCTTCTACTTTCTCC 183
| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 63 ACGGCCGTGGCGGTCTCTTCGTCGGCTCTCTCATTCCTTGTTGTCTCTTCTACTTTCTCC 122
Query 184 AGCTCTACCTTAAACGACGCCGTCCTCCTCCCTCCGACCCGACGGACTTACCGAGAACTT 243
|||| ||||| |||||||||||||||||||||||||||||| |||| ||||||||||| |
Sbjct 123 AGCTTTACCTAAAACGACGCCGTCCTCCTCCCTCCGACCCGGCGGAATTACCGAGAACGT 182
Query 244 TTTCACGGACTAATCTCTTCTCTCGCGGGAACTCGATCGGACGAGTTCGAGTCTCCTCCC 303
||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |
Sbjct 183 CGTCACGGACTAATCTCTTCTCTCGTGGAAACTCGATCGGACGAGTTCGAGTCTCCTCTC 242
Query 304 GAGCAGTTCCTGTAGCTAAACCTTCCGATTCGCCTTATTACATTGGGTTGGAGAGAGTCA 363
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 243 GAGCGGTTCCTGTGGCTAAACCTTCCGATTCGCCTTATTACATTGGGTTGGAGAGAGTCA 302
Query 364 AAACGGATCCGTACGATCGGATTACGAACACGGATGGGATTATTCAGCTTGGATTAGCCG 423
| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct 303 AGACGGATCCGTACGATCGGATTAAGAACACGGATGGGATTATTCAGCTTGGATTAGCTG 362
Query 424 AGAGTACGCTGTGCTTTGACTTGCTACAGAGATGGATGTCAGAGAATTTGATGGAGTCAA 483
|||||||||||||||| |||||||| |||||||||||||| |||||||||||||| ||||
Sbjct 363 AGAGTACGCTGTGCTTGGACTTGCTTCAGAGATGGATGTCTGAGAATTTGATGGATTCAA 422
Query 484 TGATGCAATCTGATGATGGTGAATTTGATATTAGTAGTATCGCCATGTATAAACCTTTTG 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 423 TGATGCAATCTGATGATGGTGAATTTGATATTAGTAGTATCGCCATGTATAAACCTTTTG 482
Query 544 AAGGATTACTTGAACTCAGAGTGGCTTTTGCTGATTTCATGTCACGAATAATGGGAGGTA 603
||||||| || ||||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct 483 AAGGATTGCTGGAACTTAGAGTGGCTTTTGCTGATTTCATGTCACGAATAATGGGAAGTA 542
Query 604 ATGTGTCATTTGATCCC-TCAAATATGGTTATAACAGCCGGTGGGACTCCTGCTATTGAA 662
||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||||| |||
Sbjct 543 ATGTGTCATTTGA-CCCGTCAAACATGGTTATAACAGCTGGTGGGACTCCTGCTATCGAA 601
Query 663 GTATTGGCCTTCTGTTTGGCTGATCATGGAAATGCTTTTCTAATTCCGACGCCATATTAT 722
|||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct 602 GTATTGGCCTTCTGCTTGGCAGATCATGGAAATGCTTTTCTAATTCCTACGCCATATTAT 661
Query 723 CCAGGCTTTGATAGGGATATTAAATTCCGGACAGGAGTGGAGCTTATACCAGTACACTGC 782
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 662 CCAGGCTTTGACAGGGATATTAAATTCCGGACAGGAGTGGAGCTTATACCAGTACACTGC 721
Query 783 CGTAGCTCTGACAATTTTACTGTAACGGTTTCCGCACTGGAACAAGCTTTGAATCAGGCT 842
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 722 CGTAGCTCTGACAATTTTACTGTAACGGTTTCCGCACTAGAACAAGCTTTGAATCAGGCT 781
Query 843 AGAAAACGAGGAAGCAAGGTTTCTGGCATCCTCTTTTCAAACCCGTCAAATCCTGTTGGA 902
|||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 782 AGAAAACGAGGAAGCAAGGTTTCTGGCATCCTCTTTTCAAACCCTTCAAATCCAGTTGGG 841
Query 903 AACATACTATCAAGGGAGACGCTTTGTGATATTTTGAGATTTGCTCAAGAGAAGAACATC 962
||||||||||| |||||||| || |||||||||||||||||||||||||| ||||||
Sbjct 842 AACATACTATCTAGGGAGACACTCCAAGATATTTTGAGATTTGCTCAAGAGAAAAACATC 901
Query 963 CATGTTATTTCTGATGAAATATTTGCGGGTTCTGTTTACGGGGACAAAGAGTTTGTTAGC 1022
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 902 CATGTTATATCTGATGAAATATTTGCGGGTTCTGTTTACGGGGACAAAGAGTTTGTTAGC 961
Query 1023 ATGGCTGAGATCGCTGGCTCAGGGGAATTTGATAAGACTAGGGTTCATATCATATATGGC 1082
||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct 962 ATGGCTGAGATTGCTGGCTCAGGGGAATTTGATAAGAGTAGGGTTCATATCATCTATGGC 1021
Query 1083 TTGTCAAAAGACCTTTCAATTCCTGGTTTTAGAGCTGGAGTCATCTACTCCTTTCATGAA 1142
|||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1022 TTGTCAAAGGACCTTTCAATTCCCGGTTTTAGAGCTGGAGTCATCTACTCCTTTCATGAA 1081
Query 1143 GACGTAGTAAATGCTGCAAAGAAGCTGATGAGATTTTCATCAGTGCCAGTTC-TAGTTCA 1201
|||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||
Sbjct 1082 GACGTAGTAAATGCTGCAAAGAAGCTGATGAGATTTTCATCAGTGCCAGTTCCT-GTCCA 1140
Query 1202 AAGGATACTTATCTCTCTACTATCTGATGTAAGATTCATTGAGGGATACATG-GCAGCAC 1260
|||||||||||||||||| ||||||||||| ||||||||||||| ||||||| | |||||
Sbjct 1141 AAGGATACTTATCTCTCTGCTATCTGATGTTAGATTCATTGAGGAATACATGAG-AGCAC 1199
Query 1261 ACAGGCAAAGGATCCGGGATAAGCATATTCGGTTTGTGGAAGGTTTGAAACAATTAGGAA 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1200 ACAGGCAAAGGATCCGGGATAAGCATATTCGGTTTGTGGAAGGTTTGAAACAATTAGGAA 1259
Query 1321 TACCATGTGCTGAGAGTGGTGGTGGGTTGTATTGTTGGGTAGACATGAGCAGTTTACTGA 1380
| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1260 TTCCATGTGCTGAGAGTGGTGGTGGGTTGTATTGTTGGGTTGACATGAGCAGTTTACTGA 1319
Query 1381 CATCTTACAGTGAGAAAGGAGAACTCGAGTTATTTGAGAAGCTATTGACTGTTGCTAAGA 1440
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1320 CATCCTACAGTGAGAAAGGAGAACTCGAATTATTTGAGAAGCTATTGACTGTTGCTAAGA 1379
Query 1441 TTAATGCCACTCCAGGAACAGCCTGTTATTGTATAGAACCAGGTTGGTTCAGGTGCTGTT 1500
|||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct 1380 TTAATGCCACTCCAGGAACAGCCTGTTATTGTATTGAACCGGGTTGGTTCAGGTGCTGTT 1439
Query 1501 TCACCGCTTTAGCTGATGAAGATATCCCAGTGATTATGGAACGAATCAGACAGCTT-GCT 1559
| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct 1440 TTACCGCTTTAGCTGATGAAGATATCCCAGTGATTATGGAACGGATCAGACAGCTTAGG- 1498
Query 1560 GAATCATTTAGATCTTGAGGTCGAACCAGAATTTTGGT 1597
||||||| |||||||||||||||||||||||||| |||
Sbjct 1499 GAATCATCTAGATCTTGAGGTCGAACCAGAATTTAGGT 1536
> Ahg949711 jgi|Araly1|949711|scaffold_801598.1
Length=1073
Score = 1498 bits (811), Expect = 0.0
Identities = 899/943 (95%), Gaps = 0/943 (0%)
Strand=Plus/Minus
Query 2080 TGTAAGGATTCTGCTTTCTCATTTCAACAGCTCTTCTCATATAACTTCTCCTTCTGCTCA 2139
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 943 TGTAAGGATTCTGCTTTCTCATTTCAACAGCTCTTCTCATATAACTTCTCCTTCGGCTCA 884
Query 2140 TCATTATCAGCTCCCCGAGTGTCTGTGGCGTCCTCACAGGAAAGCCAATACTCATGTTGT 2199
||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct 883 TCATTATCAGCTCCCCGAGTGTCTGAGGCGTCCTCACAGGAAATCCAATACTCATGTTGT 824
Query 2200 CAGTTTCTGTAGTAAGCTTCACTTCTTCATGCAACGGATGAGTAGAAACCTGAACGTCCT 2259
||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct 823 CAGATTCTGTAGTAAGCTTTACTTCTTCATGCAACGGATGAGTAGAAACCTGAACGTCTT 764
Query 2260 CAGAAACAGCAGCTTTGACCTTTTCTGATGGAAGAAGACGTGGAAAGAGCTTTTCCAAGA 2319
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 763 CAGAATCAGCAGCTTTGACCTTTTCTGATGGAAGAAGACGTGGAAAGAGCTTTTCCAAGA 704
Query 2320 ACGAAGCTCCCACAAGACTGGAAGCTCCCGTCATGTAACTGCTAGTACTGTCATCAGATT 2379
||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct 703 ACGAAGCTCCCACAAGACTGGAAGCGCCCGTCATGTAACTGCTCGTACTGTCATCAGATT 644
Query 2380 CATAAGCTGGCGATGTTGGCATCGAGCTAGTCACTGTATTCAGGTTGTCATCAAATTCAT 2439
|||||||||| ||||||||||| || || |||||| ||||||||||||||||||||||||
Sbjct 643 CATAAGCTGGTGATGTTGGCATTGAACTTGTCACTCTATTCAGGTTGTCATCAAATTCAT 584
Query 2440 CCACCGCAACAGCACCGGATATCGAAACCGAGCGGTTTGTTGCTAATAGAGACGGCACAG 2499
|||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||
Sbjct 583 CCACCGCAACAGCACCGGATATCGAAACTGAGCGGTTTGTTGCTAATAGAGATGGTACAG 524
Query 2500 AGCTGAAGGAGTCACTGCTTGCATCATCAAAAATATCGCTGCTGGTTTCAACATCACCGT 2559
|||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 523 AGCTGAAGGAATCACTGCTTGCGTCATCAAAAATATCGCTGCTGGTTTCAACCTCACCGT 464
Query 2560 ACATGGGAGGCGGTGGCAGCGGTTGATCCAACAGCTCAGGTGGACTGGTATCAACAAAGC 2619
|||||||||| ||||||||||| ||||||||| ||||||||||| |||||||||||||||
Sbjct 463 ACATGGGAGGAGGTGGCAGCGGCTGATCCAACGGCTCAGGTGGATTGGTATCAACAAAGC 404
Query 2620 ATGGGTATGGTTGTCCTGGAGTTTCTTCCCAATCGAAAGGAACCGAAGTAACCTGCTTAA 2679
|||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||
Sbjct 403 ATGGGTATGGTTGTCCAGGAGTTTCTTCCCAATCGAACGGAACTGAAGTAACCTGCTTAA 344
Query 2680 CCGGAACAGGAACTGGAGGCGGTAATGGAGTCGGCGTAGCGGTTTCCAATGGTGGATGTG 2739
| ||||| ||||| ||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct 343 CGGGAACTGGAACCGGAGGCGGTAATGGAGTCGTCGTAGCGGTTTCCGATGGTGGATGTG 284
Query 2740 GAAGCTGAGGTGGGTCATTTGAGGAAGCAGGGAGTGGTTTTCCAGGCGTTTCTTCCCAAC 2799
||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct 283 GAAGCTGTGGTGGGTCATTTGAGGATGGAGGGAGTGGTTTTCCAGGCGTTTCTTCCCAAC 224
Query 2800 GGAAAGGAACTGATGTTACCAGCTTAACCGGGACTGGGATAGGTGGCGGAAGCGGAGGAG 2859
|||||||||| ||||| |||||||||||||||||||||| ||||||||||||| ||||||
Sbjct 223 GGAAAGGAACCGATGTGACCAGCTTAACCGGGACTGGGACAGGTGGCGGAAGCTGAGGAG 164
Query 2860 GAGAAGGCACAAAAGTGGCTAGTGAAGGTTGCCAATTCTTCTTGGGGAAGCCAGGCCGCT 2919
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 163 GAGAAGGCACAAAAGTGGCTAGTGAAGGTTGCCAATTCTTCTTGGGGAAGCCAGGCCGTT 104
Query 2920 CTTCCCAAATGAAAGGAACAGAAGGAGGCTGTCTCAATTGTTTTCGAGGTGGTTTTGTTT 2979
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 103 CTTCCCAAATGAAAGGAACAGAAGGAGGCTGTCTCAATTGTTTTTGAGGTGGTTTTGTTT 44
Query 2980 CTTTTGGTTCCATATCAGACATTTGTTCGTATCTCTTACGTTG 3022
|||| |||||||| |||||||||| ||||||||||||||||||
Sbjct 43 CTTTAGGTTCCATTTCAGACATTTATTCGTATCTCTTACGTTG 1
Score = 219 bits (118), Expect = 1e-55
Identities = 126/130 (97%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 1817 ATCTTTATAAGTGTTTTCTTCTAAATGAGCTTCAACCTCGGTTGGTATTTTTTCCACTCA 1876
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1073 ATCTTTGTAAGTGTTTTCTTCTAAATGAGCTTCAACCTCGGTTGGTATTTTTTCCACTCA 1014
Query 1877 AGGCCTTCTATCATTTTGATGCCCGGCACAAAGAGGCAGCAGCTATCAGCTCCATTCTTT 1936
|||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||
Sbjct 1013 AGGCCTTCTATCATTTTGATTCCCGGCACAAAAAGGCAGCAGTTATCAGCTCCATTCTTT 954
Query 1937 GTAAATTCCT 1946
||||||||||
Sbjct 953 GTAAATTCCT 944
> Ahg926202 jgi|Araly1|926202|scaffold_201763.1
Length=915
Score = 632 bits (342), Expect = 4e-180
Identities = 399/427 (93%), Gaps = 2/427 (0%)
Strand=Plus/Plus
Query 139 TCTTCGTCGGCTCTCTCATTCCTTGTTGTCTCTTCTACTTTCTCCAGCTCTACCTTAAAC 198
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct 111 TCTTCGTCGGCTCTCTCATTCCTTGTTGTCTCTTCTACTTTCTCCAGCTTTACCTAAAAC 170
Query 199 GA-CGCCGTCCTCCTCCCTCCGACCCGACGGACTTACCGAGAACTTTTTCACGGACTAAT 257
|| | |||||||||||||||| |||||||||| ||||||||||| | ||||||||||||
Sbjct 171 GATC-CCGTCCTCCTCCCTCCAACCCGACGGAGTTACCGAGAACGTCGTCACGGACTAAT 229
Query 258 CTCTTCTCTCGCGGGAACTCGATCGGACGAGTTCGAGTCTCCTCCCGAGCAGTTCCTGTA 317
||||||||||| || ||||||||||||||||||||||||||||| ||||| |||||| |
Sbjct 230 CTCTTCTCTCGTGGAAACTCGATCGGACGAGTTCGAGTCTCCTCTCGAGCTGTTCCTCTG 289
Query 318 GCTAAACCTTCCGATTCGCCTTATTACATTGGGTTGGAGAGAGTCAAAACGGATCCGTAC 377
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 290 GCGAAACCTTCCGATTCGCCTTATTACATTGGGTTGGAGAGAGTCAAGACGGATCCGTAC 349
Query 378 GATCGGATTACGAACACGGATGGGATTATTCAGCTTGGATTAGCCGAGAGTACGCTGTGC 437
|||||||||| ||||||||| ||||||||||||||||||||||| |||||||| ||||||
Sbjct 350 GATCGGATTAAGAACACGGACGGGATTATTCAGCTTGGATTAGCTGAGAGTACACTGTGC 409
Query 438 TTTGACTTGCTACAGAGATGGATGTCAGAGAATTTGATGGAGTCAATGATGCAATCTGAT 497
|||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct 410 TTTGACTTGCTACAGAGATGGATGTCTGAGAATTTGATGGAGTCGATGATGCAATCTGAT 469
Query 498 GATGGTGAATTTGATATTAGTAGTATCGCCATGTATAAACCTTTTGAAGGATTACTTGAA 557
|||||| |||| ||||||||||||||||| |||||||||||| ||||||||||||| |||
Sbjct 470 GATGGTAAATTCGATATTAGTAGTATCGCAATGTATAAACCTATTGAAGGATTACTGGAA 529
Query 558 CTCAGAG 564
|||||||
Sbjct 530 CTCAGAG 536
> Ahg343780 jgi|Araly1|343780|fgenesh1_pg.C_scaffold_4000122
Length=600
Score = 534 bits (289), Expect = 1e-150
Identities = 349/378 (92%), Gaps = 4/378 (1%)
Strand=Plus/Plus
Query 189 TACCTTAAACGA-CGCCGTCCTCCTCCCTCCGACCCGACGGACTTACCGAGAACTTTTTC 247
||||| |||||| | |||||||||||||||| |||||||||| ||||||||||| | ||
Sbjct 16 TACCTAAAACGATC-CCGTCCTCCTCCCTCCAACCCGACGGAGTTACCGAGAACGTCGTC 74
Query 248 ACGGACTAATCTCTTCTCTCGCGGGAACTCGATCGGACGAGTTCGAGTCTCCTCCCGAGC 307
||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||
Sbjct 75 ACGGACTAATCTCTTCTCTCGTGGAAACTCGATCGGACGAGTTCGAGTCTCCTCTCGAGC 134
Query 308 AGTTCCTGTAGCTAAACCTTCCGATTCGCCTTATTACATTGGGTTGGAGAGAGTCAAAAC 367
|||||| | || |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 135 TGTTCCTCTGGCGAAACCTTCCGATTCGCCTTATTACATTGGGTTGGAGAGAGTCAAGAC 194
Query 368 GGATCCGTACGATCGGATTACGAACACGGATGGGATTATTCAGCTTGGATTAGCCGAGAG 427
|||||||||||||||||||| ||||||||| | ||||||||||||||||||||| |||||
Sbjct 195 GGATCCGTACGATCGGATTAAGAACACGGACGAGATTATTCAGCTTGGATTAGCTGAGAG 254
Query 428 TACGCTGTGCTTTGACTTGCTACAGAGATGGATGTC-AGAGAATTTGATGGAGTCAATGA 486
||| |||||||||||||||||||||||||||||||| | |||||||||||||||| ||||
Sbjct 255 TACACTGTGCTTTGACTTGCTACAGAGATGGATGTCTA-AGAATTTGATGGAGTCGATGA 313
Query 487 TGCAATCTGATGATGGTGAATTTGATATTAGTAGTATCGCCATGTATAAACCTTTTGAAG 546
||||||||||||||||| |||| ||||||||||||||||| |||||||||||| ||||||
Sbjct 314 TGCAATCTGATGATGGTAAATTCGATATTAGTAGTATCGCAATGTATAAACCTATTGAAG 373
Query 547 GATTACTTGAACTCAGAG 564
||||||| ||||||||||
Sbjct 374 GATTACTGGAACTCAGAG 391
> Ahg891256 jgi|Araly1|891256|Al_scaffold_0007_3242
Length=696
Score = 527 bits (285), Expect = 2e-148
Identities = 346/376 (92%), Gaps = 2/376 (1%)
Strand=Plus/Plus
Query 189 TACCTTAAACGA-CGCCGTCCTCCTCCCTCCGACCCGACGGACTTACCGAGAACTTTTTC 247
||||| |||||| | |||||||||||||||| |||||||||| |||||||| || | ||
Sbjct 4 TACCTAAAACGATC-CCGTCCTCCTCCCTCCAACCCGACGGAGTTACCGAGGACGTCGTC 62
Query 248 ACGGACTAATCTCTTCTCTCGCGGGAACTCGATCGGACGAGTTCGAGTCTCCTCCCGAGC 307
|| ||| |||||||||||||| || ||||||||||||||||||||||||||||| |||||
Sbjct 63 ACAGACAAATCTCTTCTCTCGTGGAAACTCGATCGGACGAGTTCGAGTCTCCTCTCGAGC 122
Query 308 AGTTCCTGTAGCTAAACCTTCCGATTCGCCTTATTACATTGGGTTGGAGAGAGTCAAAAC 367
|||||| | || |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 123 TGTTCCTCTGGCGAAACCTTCCGATTCGCCTTATTACATTGGGTTGGAGAGAGTCAAGAC 182
Query 368 GGATCCGTACGATCGGATTACGAACACGGATGGGATTATTCAGCTTGGATTAGCCGAGAG 427
|||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||
Sbjct 183 GGATCCGTACGATCGGATTAAGAACACGGACGGGATTATTCAGCTTGGATTAGCTGAGAG 242
Query 428 TACGCTGTGCTTTGACTTGCTACAGAGATGGATGTCAGAGAATTTGATGGAGTCAATGAT 487
||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct 243 TACACTGTGCTTTGACTTGCTACAGAGATGGATGTCTGAGAATTTGATGGAGTCGATGAT 302
Query 488 GCAATCTGATGATGGTGAATTTGATATTAGTAGTATCGCCATGTATAAACCTTTTGAAGG 547
|||||||||||||||| |||| ||||||||||||||||| |||||||||||| |||||||
Sbjct 303 GCAATCTGATGATGGTAAATTCGATATTAGTAGTATCGCAATGTATAAACCTATTGAAGG 362
Query 548 ATTACTTGAACTCAGA 563
|||||| |||||||||
Sbjct 363 ATTACTGGAACTCAGA 378
> Ahg887541 jgi|Araly1|887541|Al_scaffold_0891_2
Length=480
Score = 348 bits (188), Expect = 2e-94
Identities = 224/242 (93%), Gaps = 0/242 (0%)
Strand=Plus/Plus
Query 189 TACCTTAAACGACGCCGTCCTCCTCCCTCCGACCCGACGGACTTACCGAGAACTTTTTCA 248
||||| |||||||||||||||||||||||| |||||||||| ||||||||||| | |||
Sbjct 4 TACCTAAAACGACGCCGTCCTCCTCCCTCCAACCCGACGGAGTTACCGAGAACGTCGTCA 63
Query 249 CGGACTAATCTCTTCTCTCGCGGGAACTCGATCGGACGAGTTCGAGTCTCCTCCCGAGCA 308
|||||||||||||||||||| || |||||||||| ||||||||||| |||||| |||||
Sbjct 64 CGGACTAATCTCTTCTCTCGTGGAAACTCGATCGAACGAGTTCGAGCCTCCTCTCGAGCT 123
Query 309 GTTCCTGTAGCTAAACCTTCCGATTCGCCTTATTACATTGGGTTGGAGAGAGTCAAAACG 368
|||||| | || |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 124 GTTCCTCTGGCGAAACCTTCCGATTCGCCTTATTACATTGGGTTGGAGAGAGTCAAGACG 183
Query 369 GATCCGTACGATCGGATTACGAACACGGATGGGATTATTCAGCTTGGATTAGCCGAGAGT 428
||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct 184 GATCCGTACGATCGGATTAAGAACACGGATGGGATTATTCAGCTTGGATTAGCTGAGAGT 243
Query 429 AC 430
||
Sbjct 244 AC 245
> Ahg937748 jgi|Araly1|937748|scaffold_501939.1
Length=472
Score = 342 bits (185), Expect = 8e-93
Identities = 219/236 (93%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 184 AGCTCTACCTTAAACGACGCCGTCCTCCTCCCTCCGACCCGACGGACTTACCGAGAACTT 243
|||| ||||| |||||||||||||||||||||||| |||||||||| ||||||||||| |
Sbjct 34 AGCTTTACCTAAAACGACGCCGTCCTCCTCCCTCCAACCCGACGGAGTTACCGAGAACGT 93
Query 244 TTTCACGGACTAATCTCTTCTCTCGCGGGAACTCGATCGGACGAGTTCGAGTCTCCTCCC 303
||||||||||||||||||||||| || |||||||||||||||||||||| |||||| |
Sbjct 94 CGTCACGGACTAATCTCTTCTCTCGTGGAAACTCGATCGGACGAGTTCGAGCCTCCTCTC 153
Query 304 GAGCAGTTCCTGTAGCTAAACCTTCCGATTCGCCTTATTACATTGGGTTGGAGAGAGTCA 363
|||| |||||| | || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 154 GAGCTGTTCCTCTGGCGAAACCTTCCGATTCGCCTTATTACATTGGGTTGGAGAGAGTCA 213
Query 364 AAACGGATCCGTACGATCGGATTACGAACACGGATGGGATTATTCAGCTTGGATTA 419
| |||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 214 AGACGGATCCGTACGATCGGATTAAGAACACGGATGGGATTATTCAGCTTGGATTA 269
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 120098542485
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5