BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G51950.1
Length=1991
Score E
Sequences producing significant alignments: (Bits) Value
Ahg495263 jgi|Araly1|495263|fgenesh2_kg.8__1079__AT5G51950.1 3044 0.0
Ahg916815 jgi|Araly1|916815|Al_scaffold_0008_1566 1086 0.0
Ahg938553 jgi|Araly1|938553|scaffold_502744.1 682 0.0
Ahg949744 jgi|Araly1|949744|scaffold_801631.1 431 1e-119
Ahg952155 jgi|Araly1|952155|scaffold_41700002.1 420 2e-116
Ahg952154 jgi|Araly1|952154|scaffold_41700001.1 292 5e-78
> Ahg495263 jgi|Araly1|495263|fgenesh2_kg.8__1079__AT5G51950.1
Length=1983
Score = 3044 bits (1648), Expect = 0.0
Identities = 1881/1991 (94%), Gaps = 26/1991 (1%)
Strand=Plus/Plus
Query 17 TAAAGAATCAAACTTAATCTTTCACCCATAATGGGTTTACAAATATTATGGTTATTTCGC 76
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1 TAAAGAATCAAACTTAATCTTTCACCCATAATGGGTTTACAAAGATTATGGTTATTTCGC 60
Query 77 AAAATATTCATCATCACATACATCTTCCATGCCTCGTGTTCT-CCAGATAAAGCTGGCTA 135
| ||| |||||| | |||||||||| |||||||||||||| | |||||||||||||||||
Sbjct 61 ATAATTTTCATCGTAACATACATCTCCCATGCCTCGTGTT-TGCCAGATAAAGCTGGCTA 119
Query 136 TTACAGTTTTATGAAAGATGCAACATTAGCACCAATGTTCGCTCGGTTTGATTACATAAT 195
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 120 TTACAGTTTTATGAAAGATGCAACATCGGCACCAATGTTCGCTCGGTTTGATTACATAGT 179
Query 196 CATCGGAGGAGGGACTTCGGGTTGCGCGTTAGCCGCGACGCTATCTCAAAACGCTAGCGT 255
|||||||||||| |||||||||||| |||||||||| |||||| ||||||||||||||||
Sbjct 180 CATCGGAGGAGGAACTTCGGGTTGCTCGTTAGCCGCAACGCTAGCTCAAAACGCTAGCGT 239
Query 256 TTTGGTTCTTGAACGCGGTGGTGCTCCCTACGACAATCCTACGGCAACAGATATCGAAAA 315
||||||||||||||| ||||| ||||||||||||||||| |||||||| |||||||||||
Sbjct 240 TTTGGTTCTTGAACGTGGTGGCGCTCCCTACGACAATCCGACGGCAACGGATATCGAAAA 299
Query 316 CTTTGCCACCACACTCTCAAACACATCACCGAAATCTTGGTCGCAACTTTTTATCTCCGA 375
|||||||||||||||||||||||||||||| || ||||||||||| |||||| |||||||
Sbjct 300 CTTTGCCACCACACTCTCAAACACATCACCCAATTCTTGGTCGCAGCTTTTTGTCTCCGA 359
Query 376 GGACGGCGTTTACAACACTCGTGCACGCGTCCTCGGTGGTGGCTCCGTGTTAAACGCCGG 435
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 360 GGACGGCGTTTACAACACTCGTGCACGCGTCCTCGGTGGTGGCTCGGTGTTAAACGCCGG 419
Query 436 GTTCTACACACGTGCGGGAGATGAGTACGTGAAGGAGACTGAGTGGAAGA-CTGATGAAG 494
||||||||| ||||||||||| |||||||| ||||||||||||||||||| | |||||||
Sbjct 420 GTTCTACACTCGTGCGGGAGAAGAGTACGTTAAGGAGACTGAGTGGAAGAGC-GATGAAG 478
Query 495 TGGAAGCTGCTTACGAGTGGGTCGAGAAGAAAGTGGCGTTTCAACCGCCGGTTCTGGGAT 554
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 479 TGGAAGCTGCTTACGAGTGGGTCGAGAAGAAAGTGGCGTTTCAACCGCCGGTGATGGGAT 538
Query 555 GGCAAACGGCGTTTAAAGATGGGCTTTTGGAGGCTGGTGAGTTTCCTTACAATGGTTTCA 614
|||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 539 GGCAAACGGCGTTTAAAGATGGGCTTTTGGAGGCTGGTGAGTTTCCGTACAACGGTTTCA 598
Query 615 CGTATGATCATATCTATGGGACTAAGATCGGTGGTACGATCTTTGACCGTGCTGGTCATA 674
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 599 CGTATGATCATATTTATGGGACTAAGATCGGTGGTACGATCTTTGACCGTGCTGGTCATA 658
Query 675 GACACACGGCCGCTGATTTGTTGGAATATGCTAATCCGGGCAACATTGTTGTCTACTTGC 734
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 659 GACACACGGCCGCTGATTTGTTGGAATATGCTAATCCGGGCAACATCGTTGTCTACTTGC 718
Query 735 ATGCCTCTGTTCACAAGATCCTCTTCACCACCAAAGGAAGGCCAAGGCCAAAAGCATACG 794
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 719 ATGCCTCTGTTCACAAGATCCTCTTCACCACCAAAGGACGGCCAAGGCCAAAAGCATACG 778
Query 795 GAGTGATATTTCAAGACGCGAACGGAGTGTTACACAAGGCAGAGTTAGAGAAGAATTCAA 854
||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||| |||
Sbjct 779 GAGTGATATTTCAAGACGCCAACGGTGTGATACACAAGGCAGAGTTAGAGAAGAATGCAA 838
Query 855 TGAACGAGGTGATTTTGTCCGCGGGGGCGATTGGGAGCCCGCAATTGTTGATGCTGAGCG 914
|||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 839 TGAATGAGGTGATTTTGTCCGCGGGGGCCATTGGGAGCCCGCAATTGTTGATGCTGAGTG 898
Query 915 GCATAGGTCCCGCAGCTCATCTCGCGGCTCACGGGATTAAACCGTTGGTCTTAGATCATC 974
||||||||||||| ||||||||| | |||||||||||||||||| |||||||||||||||
Sbjct 899 GCATAGGTCCCGCGGCTCATCTCACAGCTCACGGGATTAAACCGGTGGTCTTAGATCATC 958
Query 975 CGATGGTAGGGCAAGGTATGGGAGATAATCCCATGAATGCCATATTTATTCCTTCTCCTA 1034
|||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||
Sbjct 959 CGATGGTAGGGCAAGGGATGGGAGATAATCCGATGAATGCCATATTTATTCCGTCTCCTA 1018
Query 1035 CGCCCGTGGAGGTTTCTCTAATACAAGTCGTTGGAATCACAAAGTTTGAAAGTTACATAG 1094
||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct 1019 CGCCCGTCGAGGTTTCTCTAATACAAGTCGTTGGGATCACAAAGTTTGAAAGTTACATTG 1078
Query 1095 AAGGAGCAAGTGGTGTAATCTTCTCATATAGTTGGACTCGTAGATTTTTCGATGGTGTTT 1154
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1079 AAGGAGCAAGTGGTGTCATCTTCTCTTATAGTTGGACTCGTAGATTTTTCGATGGTGTTT 1138
Query 1155 TGAATTATCTCAACGAGATGCAGACAAGCCGTACTACTAGTACTACATCTCCAACACTGT 1214
||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 1139 TGAATTATCTCAACGAGATTCAGACAAGCCGTACTACGAGTACTACATCTCCAACACTGT 1198
Query 1215 CGACCCAATCCATCACAGATTTTTTCAA-TCCCATCAATCCTCTATTGAATGCTACCACG 1273
|||||||||||||||||||||||||||| ||| | | ||||||||||||||| |||||
Sbjct 1199 CGACCCAATCCATCACAGATTTTTTCAAATCC-A--A-TCCTCTATTGAATGCGACCACA 1254
Query 1274 AGAGCCGGTTTGATCCTCCAGAAAATCGCGGGACCGATCTCGAGAGGTCATTTAGAGCTT 1333
|||||||||||||||||||| ||||| |||||||| ||||||||||||||||| ||||||
Sbjct 1255 AGAGCCGGTTTGATCCTCCAAAAAATTGCGGGACCAATCTCGAGAGGTCATTTGGAGCTT 1314
Query 1334 AGGAACACAAACCCGGATGATAATCCTTCAGTAAGGTTCAACTATTATCAAGAGCCAGAG 1393
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1315 AGGAACACAAACCCAGATGATAATCCTTCAGTAAGGTTCAACTATTATCAAGAGCCAGAG 1374
Query 1394 GATCTACAGATATGTGTTGAAGGGATCAACACCATTATTAAAGTGATCAACTCCAAGGCA 1453
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1375 GATCTACAGATATGTGTTGAAGGGATCAACACCATTATCAAAGTGATCAACTCCAAGGCA 1434
Query 1454 TTCTCCAAATTCAAGTACCCGGACGCGACCATACATGGACTACTCGATCTAATGCTAAGC 1513
||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 1435 TTCTCCAAATTCAAGTACCCGGACGCGACGATACATGGACTACTTGATCTAATGCTAAGC 1494
Query 1514 GTTCCTACCAATCTGAGGCCGCGGCATATAACCTCGATGTTCAATTT-AAGGCAGTTTTG 1572
|||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||
Sbjct 1495 GTTCCTACCAATCTGAGGCCGCGGCACATAACCTCGATGTTCAATTTGAAG-CAGTTTTG 1553
Query 1573 CATTGACACTGTGATGACAATTTGGCACTACCATGGAGGTTGCCAAGTTGGAAGAGTGGT 1632
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1554 CATAGACACTGTGATGACAATTTGGCACTACCATGGAGGTTGCCAAGTTGGAAGAGTGGT 1613
Query 1633 TGACAAGAATTACAGAGTCTTAGGCATTGATTCCTTAAGGGTCATCGATGGATCCACATT 1692
|||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 1614 TGACAAGAATTACAGAATCTTAGGCATCGATTCATTAAGGGTCATCGATGGATCCACATT 1673
Query 1693 TCTCAAGTCTCCGGGGACTAATCCTCAAGCTACTGTTATGATGCTCGGAAGGTATATGGG 1752
||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 1674 TCTCAAGTCTCCGGGGACTAATCCTCAAGCTACGGTTATGATGCTCGGAAGGTACATGGG 1733
Query 1753 CCAAAGGATTCTTCAAGAGAGGGAGATAT-ACAACAAACCGGATAAAGAAGCGTGAGATA 1811
||||||||||||||||||||||| || || || |||| |||||||||||||||||||||
Sbjct 1734 CCAAAGGATTCTTCAAGAGAGGGCGA-ATTACCGCAAAACGGATAAAGAAGCGTGAGATA 1792
Query 1812 TTACTT-GT----TTTG--A-GAAAATCTTGATCTTGGAATTGTTTTAATCAATGTATGA 1863
|||||| | |||| | |||||||||||||||||||||||| ||||||||||||||
Sbjct 1793 TTACTTAGAGACATTTGCTAAGAAAATCTTGATCTTGGAATTGTTCTAATCAATGTATGA 1852
Query 1864 TTAACTTAAAGAGTATGAATGTGTACATCTGTTCATGTTCTGTTTCTAATATGTATAATA 1923
| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1853 TGAACTTAAAGAGTATGAATGTGTACATCTGTCCATGTTCTGTTTCTAATATGTATAATA 1912
Query 1924 ATGGT---GG--AATTATGGTACTTGGGGCTTCTAGTTTTGCAGAATTTCGGAATATGAG 1978
||| | || |||||||| |||||||||||||||||||||| ||||| |||||||||
Sbjct 1913 ATGATATAGGGGAATTATGGAACTTGGGGCTTCTAGTTTTGCAAAATTTAGGAATATGAT 1972
Query 1979 TCTAGTATTAT 1989
|| ||||||||
Sbjct 1973 TCCAGTATTAT 1983
> Ahg916815 jgi|Araly1|916815|Al_scaffold_0008_1566
Length=1683
Score = 1086 bits (588), Expect = 0.0
Identities = 1317/1660 (79%), Gaps = 85/1660 (5%)
Strand=Plus/Plus
Query 122 GATAAAGCTGG-CTATTACAGTTTTATGAAAGATGCAACATTAGCACCAATG-TTCGCTC 179
|||||||| || | |||| | |||||||| ||||||||||| ||||||| | | ||||
Sbjct 73 GATAAAGCCGGAC-ATTATACATTTATGAATGATGCAACATTGGCACCAAAGCAT-GCTC 130
Query 180 GGTTT-GATTACATAATCATCGGAGGAGGGACTTCGGGTTGCGCGTTAGCCGCGACGCTA 238
|||| | |||||| |||||| ||||| || | ||||| || |||||||| || ||
Sbjct 131 -GTTTCAACGACATAACCATCGGTGGAGGAACCGCAGGTTGTGCATTAGCCGCAACACTC 189
Query 239 TCTCAAAACGCTAGCGTTTTGGTTCTTGAACGCGGTGG-TGCTCCCTACGACAATCCTAC 297
||||||||||| |||||||||||||| ||||||||||| | | ||||| |||||||| ||
Sbjct 190 TCTCAAAACGCCAGCGTTTTGGTTCTAGAACGCGGTGGCT-CGCCCTATGACAATCCCAC 248
Query 298 GGCAACAGATATCGAAAACTTTGCCACCACACTCTCAAAC-ACATCACCGAAATCTTGGT 356
||| | ||||| | ||||| |||| |||||||| ||| ||| ||||||| || ||||
Sbjct 249 GGCCAGTGATATTGGCAACTTCGCCAACACACTCTTTAACAACA-CACCGAACTCATGGT 307
Query 357 CGCAACTTTTTATCTCCGAGGACGGCGTTTACAACACTCGTG-CACGCGTCCTCGGTGGT 415
|||| | ||| |||||||||||||||||||||||||| || | |||| |||||||||||
Sbjct 308 CGCAGCATTTCATCTCCGAGGACGGCGTTTACAACACACG-GCCACGTGTCCTCGGTGGA 366
Query 416 GGCTCCGTGTTAAACGCCGGGTTCTACACACGTGCGGGAGATGAGTACGT-GAAGGAGAC 474
||||| || |||||| || |||||||| |||||||| ||||| ||||| || | || |
Sbjct 367 GGCTCGGTAATAAACGGTGGATTCTACACGCGTGCGGGCGATGATTACGTGGATGAAG-C 425
Query 475 TGAGTGGAAGACT-GATGAAGTGGAAGCTGCTTACGAGTGGGTCGAGAAGAAAGTGGCGT 533
||||||| ||| | || |||||||||||| ||||| ||||||||||||||||| | | |
Sbjct 426 TGAGTGGGAGA-TGGAGGAAGTGGAAGCTTCTTACCAGTGGGTCGAGAAGAAACTTGTG- 483
Query 534 TTCAA-CCGCCGGTTCTGGGATGGCAAACGGCGTTTAAAGATGGGCTTTTGGAGGCTGGT 592
||||| || | || ||||||||||| ||||||| |||||||||||||||||||||||
Sbjct 484 TTCAAGCCACAAGTGATGGGATGGCAATCGGCGTTCAAAGATGGGCTTTTGGAGGCTGGA 543
Query 593 GAGTTTCCTTACAATGGTTTCACGTATGATCATATCTATGGGACTAAGATCGGTGGTACG 652
|||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct 544 GAGTTTCCGGACAATGGTTTCACGTACGATCATATCTACGGGACTAAGATCGGTGGTACG 603
Query 653 ATCTTTGACCGTGCTGGTCATAGACACACGGCCGCTGATTTGTTGGAATATGCTAATCCG 712
|||||||||| ||| ||||||||||| || || || ||||||| || |||||| |||||
Sbjct 604 ATCTTTGACCATGCCGGTCATAGACATACCGCGGCCAATTTGTTAGAGTATGCTGATCCG 663
Query 713 G-G-CAACATTGTTGTCTACTTGCATGCCTCTGTTCACAAGATCCTCTTCACCACCAAAG 770
| | | | ||||||| ||||||||||| | |||||||||||||||||||||||||||||
Sbjct 664 GAGGCGA--TTGTTGTTTACTTGCATGCTTATGTTCACAAGATCCTCTTCACCACCAAAG 721
Query 771 GAAGGCCA-AGGCCAAAAGCATACGGAGTGATATTTCAAGACGCGAACGGAGTGTTACAC 829
| || ||| | ||||||||||||| |||||||||| | ||||| || ||| |||| |||
Sbjct 722 GTAG-CCAGAAACCAAAAGCATACGAAGTGATATTTGAGGACGCAAATGGAATGTTCCAC 780
Query 830 AAGGCAGAGTTAG-AGAAGAATTCAATGAACGAGGTGATTTTGTCCGCGGGGGCGATTGG 888
||||||||| ||| | || || |||||||||| ||||| ||||| || || || || ||
Sbjct 781 AAGGCAGAGCTAGCA-AATAACGCAATGAACGAAGTGATCTTGTCTGCTGGAGCAAT-GG 838
Query 889 G-AGCCCGCAATTGTTGATGCTGAGCGGCATAGGTCCCGCAGCTCATCTCGCGGCTCACG 947
| ||||||||| |||||||||| || ||| ||||||| ||||| ||||| ||||||||||
Sbjct 839 GTAGCCCGCAACTGTTGATGCTAAGTGGCGTAGGTCCTGCAGCCCATCTTGCGGCTCACG 898
Query 948 G-GATTAAACCGTTGGTCTTAGATCATCCGATGGTAGGGCAAG-GTATGGGAGATAATCC 1005
| | | || || | ||| ||||||| || ||||| ||||| | | || | ||||||||
Sbjct 899 GCG-TGAATCCACTCGTCCTAGATCACCCTATGGTTGGGCATGAG-ATCGCTGATAATCC 956
Query 1006 CATGAATGCCATATTTATTCCTTCTCCTACGCCC-GTGGAGGTTTCTCTAATACAAG-TC 1063
|||||| | |||| || ||||||||| | || || || || || || |||||| |
Sbjct 957 CATGAACGTTGTATTCATCCCTTCTCCT-CAACCAGTAGAAGTGTCCCTCATACAAACT- 1014
Query 1064 GTTGGAATCACAAAGTTTGAAAGTTACATAGAAGGAGCAAGTGG-TGTAA-TCTTCTCAT 1121
||||| |||||||||||||| |||||||| ||||| | |||||| | | | ||| ||| |
Sbjct 1015 GTTGGGATCACAAAGTTTGATAGTTACATTGAAGGTGGAAGTGGCT-TGAGTCT-CTCTT 1072
Query 1122 AT-AGTTGGACTCGTAGATTTTTCGATGGTGTTTTGAAT-TATCTCAACGAGATGCAGAC 1179
| | ||| || ||||| ||||||||||||||||||||| | | | ||||||| || |
Sbjct 1073 TTGACTTG-ACCCGTAGGTTTTTCGATGGTGTTTTGAATCTTTTT-AACGAGA--CA-A- 1126
Query 1180 AAGCCGTACTACTAGTACTAC-ATCTCCAACACTGTCGACCCAATCCATC-ACAGATT-T 1236
|||||||||| | | ||| | | | | ||| ||||| || || | || | |
Sbjct 1127 --GCCGTACTAC-A-T-CTAGGAA-T--ATC-CTG---ACCCACTCTATTGA-AG-TCCT 1172
Query 1237 TTTCAA-TCCCATCAATCCTCTATTGAATGCTACCACGAG-A--GCCGGTTTGATCCTCC 1292
||| || || | ||| | |||| | | || | || | | ||||||||| | |
Sbjct 1173 TTTGAAATCTT-TGGATCTTGGATTGGACG-TA--ATGATTAATGGGGGTTTGATCGTTC 1228
Query 1293 AGAAAATCGCGGGACCGATCTCGAGAGGTCATTTAGAGCTTAGGAACACAAACCCGGATG 1352
| ||||||| |||||| ||| | ||| || | ||||| ||||||| |||| | |
Sbjct 1229 AAAAAATCGATGGACCGGCCTCAAAAGGACACATGGAGCTCCGGAACACGGACCCA-AGG 1287
Query 1353 -ATAATCCTTCAGTAAGGTTCAACTATTATCAAGAGCCAGAGGATCT-A-CAGATATGTG 1409
|||| |||||||| | |||||||| |||||||| || |||||| | | || | ||||
Sbjct 1288 GATAACCCTTCAGTGACATTCAACTACTATCAAGAACCTGAGGATTTGAACA-AG-TGTG 1345
Query 1410 TTGAAGGGATCAACACCATTATTAA-AGTGATCAACTCCAAGGCATTCTCCAAATTCAAG 1468
|| ||||| | |||||| ||||| | | ||| || || || || |||||||| | ||||
Sbjct 1346 TTAAAGGGCTTAACACCGTTATTCAGAC-GATAAATTCTAAAGCCTTCTCCAAGTACAAG 1404
Query 1469 TACCC-GGACGCGACCATACATG-GACTACTCGATCTAATGCTAAGCGTTCCTACCAATC 1526
||||| || | |||| || || | || ||| |||| ||| | || |||| | |||||
Sbjct 1405 TACCCAGGT-GTGACCGCACGTGAG-CTGCTCAATCTCATGTTGGGCCTTCCCATCAATC 1462
Query 1527 TGAGGCCGCGGCATATAACCTCGATGTTCAATTTAAGGCAGTTTTGCATTGACACTGTGA 1586
||||| | |||| | ||||| | |||||| || | |||||||||||| ||||||||||
Sbjct 1463 TGAGGACAAGGCACGTGACCTCAACGTTCAACTTGACGCAGTTTTGCATCGACACTGTGA 1522
Query 1587 TGACAATTTGGCACTACCATGGAGGTTGCCAAGTTGGAAGAGTGGTTGACAAGAATTACA 1646
||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1523 TGAGTATTTGGCATTACCATGGAGGTTGCCAAGTTGGAAGAGTGGTTGACAAGAATTACA 1582
Query 1647 GAGTCTTAGGCATTGATTCCTTAAGGGTCATCGATGGATCCACATTTCTCAAGTCTCCGG 1706
|||| ||||||| |||||||||||||| |||||||||||||||||||| |||||||| |
Sbjct 1583 AAGTCATAGGCATAGATTCCTTAAGGGTAATCGATGGATCCACATTTCTGAAGTCTCCAG 1642
Query 1707 GGACTAATCCTCAAGCTACTGTTATGATGCTCGGAAGGTA 1746
|||||||||| ||||| || || |||||||| ||||||||
Sbjct 1643 GGACTAATCCCCAAGCCACGGTCATGATGCTTGGAAGGTA 1682
> Ahg938553 jgi|Araly1|938553|scaffold_502744.1
Length=1774
Score = 682 bits (369), Expect = 0.0
Identities = 859/1091 (79%), Gaps = 52/1091 (5%)
Strand=Plus/Plus
Query 97 CATCTTCCATGCCTCGTGTT-CTCCAGATAAAGCTGGCTATTACAGTTTTATGAAAGATG 155
||||||||| | |||||||| ||| ||| ||||||| | || | |||||||||||||
Sbjct 71 CATCTTCCACGACTCGTGTTATTCC-GATGAAGCTGGAAACTATGGATTTATGAAAGATG 129
Query 156 CAACATTAGCACCAATGTTCGCTCGGTTTGATTACATAATCATCGGAGGAGGGACTTCGG 215
|||||| |||||||| ||| ||| || || |||||||||||||||||||| || | |
Sbjct 130 CAACATCAGCACCAAAGTTATCTCACTTCGACTACATAATCATCGGAGGAGGAACCGCTG 189
Query 216 GTTGCGCGTTAGCCGCGACGCTATCTCAAAACGCTAGCGTTTTGGTTCTTGAACGCGGTG 275
| || || |||||||| ||||| ||||||||||| | |||||| || || |||||||| |
Sbjct 190 GATGTGCATTAGCCGCAACGCTCTCTCAAAACGCAACCGTTTTAGTCCTCGAACGCGGCG 249
Query 276 GTGCTCCC-TACGACAATCCTACGGCAACAGATATCGAA-AACTTTGCCACCACACTCTC 333
|| | ||| || ||||| || ||||| |||| || || ||||| || | ||||||||
Sbjct 250 GTTC-CCCTTATGACAACCCAACGGCCTCAGACAT-AAACAACTTCGCGAACACACTCTT 307
Query 334 AAACACATCACCGAAA-TCTTGGTCGCAACTTTTTATCTCCGAGGACGGCGTTTACAACA 392
||| | | || ||| || ||||| || || || |||||||| |||||||||| ||||
Sbjct 308 GGACATAACTCC-AAACTCATGGTCACAGCTATTCATCTCCGAAGACGGCGTTTTCAACT 366
Query 393 CTCGTGCACGCGTCCTCGGTGGTGGCTCCGTGTTAAACGCCGGGTTCTACACACGTGCGG 452
| || || || || || ||||| ||| | || ||||||| ||||||||| |||||||||
Sbjct 367 CACGCGCTCGTGTACTAGGTGGAGGCACGGTCATAAACGCAGGGTTCTACTCACGTGCGG 426
Query 453 GAGATGAGTACGTGAAGG-AGAC-TGAGTGGAAGACTGATGAAGTGGAAGCTGCTTACGA 510
||| || | |||| || || | || ||| ||| ||||| || ||||| ||||||||
Sbjct 427 AAGAAGATTTCGTGGCGGAAG-CAGGA-TGGGAGAGAGATGAGGTCGAAGCGGCTTACGA 484
Query 511 GTGGGTCGAGAAGAAAGTGGCGTTTCAACCGCCGGTTCTGGGATGGCAAACGGCGTTTAA 570
|||||||||||||||||||| ||| |||| |||||| |||||||||| |||||||||
Sbjct 485 GTGGGTCGAGAAGAAAGTGGTTTTTGAACCACCGGTTAAGGGATGGCAATCGGCGTTTAG 544
Query 571 AGATGGGCTTTTGGAGGCTGGTGAGTTTCCTTACAATGGTTTCACGTATGATCATATC-T 629
|||||| |||||||| ||||||| | ||| ||||||||||||||||| || |||||| |
Sbjct 545 AGATGGACTTTTGGAAGCTGGTGTGAGTCCGTACAATGGTTTCACGTACGAACATATCGT 604
Query 630 ATGGGACTAAGATCGGTGGTACGATCTTTGACC-GTGCTGGTCATAGACACACGGCCGCT 688
|||||| ||| | ||||||||||| ||||||| | | |||||||||||||||||| ||
Sbjct 605 -TGGGACGAAGTTTGGTGGTACGATATTTGACCCG-GATGGTCATAGACACACGGCGGC- 661
Query 689 GA-TTTGTTGGAATATGCTAATCCGGGCAAC-ATTGTTGTCTACTTGCATGCCTCTGTTC 746
|| ||||||||| |||||||||||| || | |||||||||||||||||||| ||||| |
Sbjct 662 GAATTTGTTGGAGTATGCTAATCCGAACA-CGATTGTTGTCTACTTGCATGCTTCTGTCC 720
Query 747 ACAAGATCCTCTTCACCACCAAAGG-AAGGCCA-AGGCCAAAAGCATACGGAGTGATATT 804
| |||||||||||||| | ||||| || ||| ||||| |||||||| |||||||||||
Sbjct 721 ATAAGATCCTCTTCACTAATAAAGGTAA--CCAGAGGCCCAAAGCATATGGAGTGATATT 778
Query 805 TCAAGACGCGAACGGAGTGTTAC-ACAAGGCAGAGTTAG-A--G-AAGAATTCAATGA-- 857
||| || || || ||||||| | |||||||||| || | | | |||| | |||| |
Sbjct 779 TCAGGATGCAAATGGAGTGTC-CTACAAGGCAGAATTGGCAACGCAAGACT-CAATAATG 836
Query 858 AC-GAGGTGATTTTGTCCGCGGGGGCGATTGGGAGCCCGCAATTGTTGATGCTGAGCGGC 916
| |||||||| || || || || || || | |||||||||| | |||||||| || ||
Sbjct 837 AGTGAGGTGATCTTATCGGCAGGTGCCATCGCGAGCCCGCAACTATTGATGCTAAGTGGT 896
Query 917 ATAGGTCCC-GCAGCTCATCTCGCGGC-TCACGGGATTAAACCGTTGGTCTTAGATCATC 974
| || ||| || |||||||| || || | | ||| | || ||| | || ||||||| |
Sbjct 897 GTGGG-CCCTGCGGCTCATCTTGCAGCCT-ATGGGGTGAATCCGGTCATCGTAGATCAAC 954
Query 975 CGATGGTAGGGCAAGGTATGGGAGATAATCCC-ATGAATGCCA-TATTT-ATTCCTTCTC 1031
| ||||| |||||||| ||| | || || ||| |||||| || | ||| || |||||||
Sbjct 955 CCATGGTGGGGCAAGGGATGAGTGACAA-CCCGATGAAT-CCGGT-TTTCATCCCTTCTC 1011
Query 1032 CT-ACGCCCGTGGAGGTTTCTCTAATACAAGTCGTTGGAATCACAAAGTTTGAAAGTTAC 1090
|| | |||||| || || ||||| |||||| |||||||||||| ||||||| ||||||
Sbjct 1012 CTGA-GCCCGTAGAAGTGTCTCTTGTACAAGCCGTTGGAATCACCAAGTTTGGTAGTTAC 1070
Query 1091 ATAGAAGGAGCAAGTGG-TGTAA-TCTTCTCATAT-AGTTGGACTCGTAGATTTTTCGAT 1147
|| ||||| | ||||| | | | | | ||| ||| |||| ||||||||| || ||||||
Sbjct 1071 ATTGAAGGTGGAAGTGCCT-TGAGTGT-CTC-TATTAGTTTGACTCGTAGCTTCTTCGAT 1127
Query 1148 GGTGTTTTGAA 1158
|||||||||||
Sbjct 1128 GGTGTTTTGAA 1138
> Ahg949744 jgi|Araly1|949744|scaffold_801631.1
Length=1626
Score = 431 bits (233), Expect = 1e-119
Identities = 408/494 (83%), Gaps = 6/494 (1%)
Strand=Plus/Plus
Query 1283 TTGATCCTCCAGAAAATCGCGGGACCGA-TCTCGAGAGG-TCATTTAGAGCTTAGGAACA 1340
|||||| |||| ||| | | ||||| | |||| ||||| | | |||| || ||||||
Sbjct 1046 TTGATCTTCCACAAAGTAGATGGACC-AGTCTCAAGAGGAT-ACCTAGAACTCCGGAACA 1103
Query 1341 CAAACCCGGATGATAATCCTTCAGTAAGGTTCAACTATTATCAAGAGCCAGAGGATCTAC 1400
|||||||||||| || |||||||| | ||||| || || ||||| ||||| |||||
Sbjct 1104 AAAACCCGGATGAGAACCCTTCAGTGACATTCAATTACTACCAAGAACCAGAAGATCTTG 1163
Query 1401 AGATATGTGTTGAAGGGA-TCAACACCATTATTAAAGTGATCAACTCCAAGGCATTCTCC 1459
| | |||||| || ||| | || ||||||||||||||||| || || ||||| |||||
Sbjct 1164 AAAGGTGTGTT-AAAGGACTTAATACCATTATTAAAGTGATAAAATCGAAGGCCTTCTCG 1222
Query 1460 AAATTCAAGTACCCGGACGCGACCATACATGGACTACTCGATCTAATGCTAAGCGTTCCT 1519
|| | |||||||||| | | |||| ||| ||||||||| ||| | ||| ||| |||||
Sbjct 1223 AAGTACAAGTACCCGAATGAGACCGTACGCGGACTACTCAATCGCACGCTTAGCCTTCCT 1282
Query 1520 ACCAATCTGAGGCCGCGGCATATAACCTCGATGTTCAATTTAAGGCAGTTTTGCATTGAC 1579
| |||||| ||||| || || |||||| || ||| || | |||||||||||| |||
Sbjct 1283 ATCAATCTAAGGCCAAAACACATCTCCTCGAAGTCCAACTTGACGCAGTTTTGCATAGAC 1342
Query 1580 ACTGTGATGACAATTTGGCACTACCATGGAGGTTGCCAAGTTGGAAGAGTGGTTGACAAG 1639
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1343 ACTGTGATGACTATTTGGCATTACCATGGAGGTTGCCAAGTTGGAAGAGTGGTTGACAAG 1402
Query 1640 AATTACAGAGTCTTAGGCATTGATTCCTTAAGGGTCATCGATGGATCCACATTTCTCAAG 1699
||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct 1403 AATTACAAAGTCTTAGGTATTGATGCCTTAAGGGTCATCGATGGATCCACATTTCTCAAG 1462
Query 1700 TCTCCGGGGACTAATCCTCAAGCTACTGTTATGATGCTCGGAAGGTATATGGGCCAAAGG 1759
||||| ||||| ||||| ||||| || || ||||||||||||||||| ||||| |||| |
Sbjct 1463 TCTCCAGGGACCAATCCACAAGCCACGGTCATGATGCTCGGAAGGTACATGGGGCAAAAG 1522
Query 1760 ATTCTTCAAGAGAG 1773
||||||| ||||||
Sbjct 1523 ATTCTTCGAGAGAG 1536
Score = 377 bits (204), Expect = 1e-103
Identities = 345/412 (84%), Gaps = 13/412 (3%)
Strand=Plus/Plus
Query 134 TATTACAGTTTTATGAAAGATGCAACATTAGCACCAATGTT-CGCTCGGTTTGATTACAT 192
|||||| | |||||||||||||||||| ||||||||| || ||||| || || |||||
Sbjct 11 TATTACGGATTTATGAAAGATGCAACACTAGCACCAA-CTTATGCTCGCTTCGACTACAT 69
Query 193 AATCATCGGAGGAGGGACTTCGGGTTGCGCGTTAGCCGCGACGCTATCTCAAAACGCTAG 252
| ||||||||||||| ||||| ||||| || |||||||| ||||| |||||||||||||
Sbjct 70 AGTCATCGGAGGAGGAACTTCCGGTTGTGCATTAGCCGCAACGCTCTCTCAAAACGCTAA 129
Query 253 CGTTTTGGTTCTTGAACGCGGTGG-TGCTCCCTACGACAATCCTACGGCAACAGATATCG 311
|||||||||||||||||| || || | ||||||| || |||||| | || || |||||||
Sbjct 130 CGTTTTGGTTCTTGAACGAGGCGGCT-CTCCCTATGATAATCCTGCCGCTACGGATATCG 188
Query 312 AAAACTTTGCCACCACACTCTCAAACA-CATCACCGAAATCTTGGTCGCAACTTTTTATC 370
|||| || |||| |||||||| ||||| || |||| ||| | |||||||| ||||| ||
Sbjct 189 AAAAATTCGCCAACACACTCTTAAACACCA-CACCAAAAGCGTGGTCGCAGCTTTTCATA 247
Query 371 TCCGAGGACGGCGTTTACAA-CACTCGTGCACGCGTCCTCGGTGGTGGCTCCGTGTTAAA 429
||||||||||||||||| || || |||||| |||||||||||||| | ||| ||||| ||
Sbjct 248 TCCGAGGACGGCGTTTATAACCA-TCGTGCGCGCGTCCTCGGTGGAGACTCGGTGTTGAA 306
Query 430 CGCCGGGTTCTACACACGTGCGGGA-GATGAGTACGTGAAGGAGACTGAGTGGAAGACT- 487
||| ||||| ||| ||||||| ||| ||| | || ||| || || |||||||| ||| |
Sbjct 307 CGCTGGGTTTTACTCACGTGC-GGAGGATTATTATGTGGAGAAGTCTGAGTGGGAGA-TG 364
Query 488 GATGAAGTGGAAGCTGCTTACGAGTGGGTCGAGAAGAAAGTGGCGTTTCAAC 539
|| |||||||||||||||||||||||||||||||||||| | | ||| ||||
Sbjct 365 GAGGAAGTGGAAGCTGCTTACGAGTGGGTCGAGAAGAAACTTGTGTT-CAAC 415
> Ahg952155 jgi|Araly1|952155|scaffold_41700002.1
Length=1361
Score = 420 bits (227), Expect = 2e-116
Identities = 406/494 (82%), Gaps = 6/494 (1%)
Strand=Plus/Plus
Query 1283 TTGATCCTCCAGAAAATCGCGGGACCGA-TCTCGAGAGG-TCATTTAGAGCTTAGGAACA 1340
|||||| |||| ||| ||| ||||| | |||| ||||| | | |||| || ||||||
Sbjct 781 TTGATCTTCCACAAAGTCGATGGACC-AGTCTCAAGAGGAT-ACCTAGAACTCCGGAACA 838
Query 1341 CAAACCCGGATGATAATCCTTCAGTAAGGTTCAACTATTATCAAGAGCCAGAGGATCTAC 1400
|||||||||||| || |||||||| | ||||| || || ||||| ||||| |||||
Sbjct 839 AAAACCCGGATGAGAACCCTTCAGTGACATTCAATTACTACCAAGAACCAGAAGATCTTG 898
Query 1401 AGATATGTGTTGAAGGGA-TCAACACCATTATTAAAGTGATCAACTCCAAGGCATTCTCC 1459
| | |||||| || ||| | || ||||||||||||||||| || || ||||| ||||
Sbjct 899 AAAGGTGTGTT-AAAGGACTTAATACCATTATTAAAGTGATAAAATCGAAGGCCTTCTTG 957
Query 1460 AAATTCAAGTACCCGGACGCGACCATACATGGACTACTCGATCTAATGCTAAGCGTTCCT 1519
|| | |||||||||| | | |||| ||| ||||||||| ||| | ||| ||| |||||
Sbjct 958 AAGTACAAGTACCCGAATGAGACCGTACGCGGACTACTCAATCGCACGCTTAGCCTTCCT 1017
Query 1520 ACCAATCTGAGGCCGCGGCATATAACCTCGATGTTCAATTTAAGGCAGTTTTGCATTGAC 1579
| |||||| ||||| || | |||||| || ||| || | |||||||||||| |||
Sbjct 1018 ATCAATCTAAGGCCAAAACACGTCTCCTCGAAGTCCAACTTGACGCAGTTTTGCATAGAC 1077
Query 1580 ACTGTGATGACAATTTGGCACTACCATGGAGGTTGCCAAGTTGGAAGAGTGGTTGACAAG 1639
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1078 ACTGTGATGACTATTTGGCATTACCATGGAGGTTGCCAAGTTGGAAGAGTGGTTGACAAG 1137
Query 1640 AATTACAGAGTCTTAGGCATTGATTCCTTAAGGGTCATCGATGGATCCACATTTCTCAAG 1699
||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct 1138 AATTACAAAGTCTTAGGTATTGATGCCTTAAGGGTCATCGATGGATCCACATTTCTCAAG 1197
Query 1700 TCTCCGGGGACTAATCCTCAAGCTACTGTTATGATGCTCGGAAGGTATATGGGCCAAAGG 1759
||||| ||||| ||||| ||||| || || ||||||||||||||||| |||| |||| |
Sbjct 1198 TCTCCAGGGACCAATCCACAAGCAACGGTCATGATGCTCGGAAGGTACGTGGGGCAAAAG 1257
Query 1760 ATTCTTCAAGAGAG 1773
||||||| ||||||
Sbjct 1258 ATTCTTCGAGAGAG 1271
Score = 392 bits (212), Expect = 5e-108
Identities = 559/724 (77%), Gaps = 33/724 (5%)
Strand=Plus/Plus
Query 464 GTGAAGGAGACTGAGTGGAAGACT-GATGAAGTGGAAGCTGCTTACGAGTGGGTCGAGAA 522
||| || || |||||||| ||| | || ||||||||||||||||||||||||||||||||
Sbjct 1 GTGGAGAAGTCTGAGTGGGAGA-TGGAGGAAGTGGAAGCTGCTTACGAGTGGGTCGAGAA 59
Query 523 GAAAGTGGCGTTTCAA-CCGCCGGTTCTGGGATGGCAAACGGCGTTTAAAGATGGGCTTT 581
|||| | | ||| ||| || | || ||||||||||| |||| || | |||||||||||
Sbjct 60 GAAATTTGTGTT-CAAGCCACTAGTGATGGGATGGCAATCGGCATTGAGAGATGGGCTTT 118
Query 582 TGGAGGCTGGTGAGTTTCCTTACAATGGTTTCACGTAT-GATCATATC-TATGGGACTAA 639
|||| ||||| | | |||| |||||||||||||||| | ||||||||| | |||||||||
Sbjct 119 TGGAAGCTGGGGTGGTTCCATACAATGGTTTCACGT-TCGATCATATCGT-TGGGACTAA 176
Query 640 GATCGGTGGTACGATCTTTGACCGTGCTGGTCATAGACACACGGCCGCTGATTTGTTGGA 699
||| || ||||| |||||||||| || || |||||||| |||| || || |||| ||
Sbjct 177 GATTGGCGGTACAATCTTTGACCCCGCGGGCCATAGACATTCGGCTGCAAATCTGTTAGA 236
Query 700 ATATGCTAATCCGGGCAAC-ATTGTTGTCTACTTGCATGCCTCT-GTTCACAAGATCCTC 757
|||||||| |||| || | |||||||| |||||||| || ||| |||||||| ||||||
Sbjct 237 GTATGCTAACCCGGACA-CGATTGTTGTTTACTTGCACGC-TCTTGTTCACAAAATCCTC 294
Query 758 TTCACCACCAAAGGAAGGCCAAGGCCAAAAGCATACGGAGTGATATTTCAAGACGCGAAC 817
|||||||| |||||||| | ||||| || || | ||||| |||| ||||||||| ||
Sbjct 295 TTCACCACTAAAGGAAGATCGAGGCCTAAGGCGTGTGGAGTTATATATCAAGACGCAAAT 354
Query 818 GGAGTGTTACACAAGGCAGAGTTAGAGAAGAATTCAATGAACGAGGTGATTTTGTCCGCG 877
|||||||| ||||||| | | | | ||| || |||||| |||||||||||||| |||
Sbjct 355 GGAGTGTTTCACAAGGTAAAACTGGCGAAAAACGCAATGAGCGAGGTGATTTTGTGTGCG 414
Query 878 GGGGCGATTGGGAGCCCGCAATTGTTGATGCTGAGCGGCATAGGTCCCGCAG-CTCATCT 936
|| || || ||||||||||| | |||||||||| || | ||||| || | |||||
Sbjct 415 GGCGCCATCGGGAGCCCGCAGCTACTGATGCTGAGTGGTGTGGGTCCTA-AGTCCCATCT 473
Query 937 CGCGGCTCACGGGATTAAACCGTTGGTCTTAGATCATCCGATGGTAGGGCAAGGTATGGG 996
| ||| || ||| | | ||| | || | ||||| || ||||| |||||||| |||||
Sbjct 474 TGAGGCCCATGGGGTCGATCCG--G-TCATCGATCAACCCATGGTTGGGCAAGGGATGGG 530
Query 997 AGATAATCCCATGAATGCCATATT-TATTCC-TTCTCCTACGCCC-GTGGAGGTTTCTCT 1053
||||||||| ||||| || | | | ||| ||||||| | | || || | || ||
Sbjct 531 AGATAATCCAATGAA--CCTTGTCCTCGTCCCTTCTCCT-CAACTTGTAGAACTGTCCCT 587
Query 1054 AATACAAGTCGTTGGAATCACAAAGTTTGAA-AGTTACATAGAAGGAGCAAGTGG-TGTA 1111
|| | |||||||| ||||| |||||| | | || ||| ||||| | |||||| | ||
Sbjct 588 CGTAGAGGTCGTTGGTATCACCAAGTTTTATGATTT-CATTGAAGGTGGAAGTGGCT-TA 645
Query 1112 ATC-T-TCTCATATAGTTGGACTCGTAGATTTTTCGATGGTGTTTTGAATTAT-CTCAAC 1168
| | | ||||| | | ||| || ||||| || || ||| || ||||||| || ||||||
Sbjct 646 AGCCTCTCTCAAA-ACTTG-ACCCGTAGGTTCTTAGATAGTAATTTGAAT-ATTCTCAAC 702
Query 1169 GAGA 1172
||||
Sbjct 703 GAGA 706
> Ahg952154 jgi|Araly1|952154|scaffold_41700001.1
Length=220
Score = 292 bits (158), Expect = 5e-78
Identities = 183/195 (94%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 27 AACTTAATCTTTCACCCATAATGGGTTTACAAATATTATGGTTATTTCGCAAAATATTCA 86
||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||
Sbjct 1 AACTTAATCTTTCACCCATAATGGGTTTACAAAGATTATGGTTATTTCGCATAATTTTCA 60
Query 87 TCATCACATACATCTTCCATGCCTCGTGTTCT-CCAGATAAAGCTGGCTATTACAGTTTT 145
|| | |||||||||| |||||||||||||| | |||||||||||||||||||||||||||
Sbjct 61 TCGTAACATACATCTCCCATGCCTCGTGTT-TGCCAGATAAAGCTGGCTATTACAGTTTT 119
Query 146 ATGAAAGATGCAACATTAGCACCAATGTTCGCTCGGTTTGATTACATAATCATCGGAGGA 205
|||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct 120 ATGAAAGATGCAACATCGGCACCAATGTTCGCTCGGTTTGATTACATAGTCATCGGAGGA 179
Query 206 GGGACTTCGGGTTGC 220
|| ||||||||||||
Sbjct 180 GGAACTTCGGGTTGC 194
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 74847331425
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5