BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G52320.1 Length=1705 Score E Sequences producing significant alignments: (Bits) Value Ahg495302 jgi|Araly1|495302|fgenesh2_kg.8__1118__AT5G52320.1 2547 0.0 Ahg475591 jgi|Araly1|475591|fgenesh2_kg.2__721__AT1G65340.1 1038 0.0 Ahg907906 jgi|Araly1|907906|Al_scaffold_0002_987 791 0.0 Ahg925517 jgi|Araly1|925517|scaffold_201078.1 747 0.0 Ahg338681 jgi|Araly1|338681|fgenesh1_pg.C_scaffold_2000780 728 0.0 > Ahg495302 jgi|Araly1|495302|fgenesh2_kg.8__1118__AT5G52320.1 Length=1662 Score = 2547 bits (1379), Expect = 0.0 Identities = 1576/1670 (94%), Gaps = 18/1670 (1%) Strand=Plus/Plus Query 1 ACTCATATGAAAATCCATTA-TTTTGTTTGACCaaaaaaaaaaaaaTCATTTTTGTG-TG 58 ||||||| ||||||||||| ||||| |||| | |||||||| || || |||||||| || Sbjct 1 ACTCATACAAAAATCCATTATTTTTG-TTGA-CTAAAAAAAACAACTCCTTTTTGTGTTG 58 Query 59 CAATAATGGCGATGATCATAGGCTTACTTGAAATCTTCATCGCATTCATTTTCTTCTTTG 118 ||||||||| |||||||||||||||||||||||||||| | |||||||||||| ||| Sbjct 59 -AATAATGGCTTTGATCATAGGCTTACTTGAAATCTTCATAACCTTCATTTTCTTCCTTG 117 Query 119 TCTACCAGTGTTTCTCGCTCCACAAGAAAACTCCAAAGCATATGGTCATGAACTGGCCGG 178 ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct 118 CCTACCAGTGTTTCTCGCTCCACAAGAAAACTCCAAAGCATATGGTTACGAACTGGCCGG 177 Query 179 TCCTTGGGATGCTTCCGGGTGTGCTCTTCCAAATCCCTCGTATCTACGACTTTGTTACGG 238 ||||||||||||||||||||||| || |||| ||||||||| |||| ||||| || || | Sbjct 178 TCCTTGGGATGCTTCCGGGTGTGGTCCTCCACATCCCTCGTGTCTATGACTTGGTCACTG 237 Query 239 AGGCTCTTGAGGCAGAAAATATGACGGGTTGTTTCATAGGGCCATGGCTTAGTGGAACAG 298 |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 238 AGGCTCTTGAGGGAGAAAATATGACGGGTTGTTTCATAGGGCCATGGTTTAGTGGAACAG 297 Query 299 ACATATTGCTCACTGTTGACCCGGTGAATATCCAGTATATTCTAAGTTCAAACTTCGTGA 358 ||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||| | Sbjct 298 ACATATTAATCACTGCTGACCCGGTGAATATCCAGTACATTCTAAGTTCAAACTTCGTTA 357 Query 359 ATTACCCCAAAGGGAAGAAGTTTAACAAGATCTTTGAATTCTTGGGAGATGGGATTTTCA 418 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 358 ATTACCCTAAAGGGAAGAAGTTTAACAAGATCTTTGAATTCTTGGGAGATGGGATTTTCA 417 Query 419 ACGTTGACTCGGGCTTGTGGGAGGATATGAGAAACTCGTCTCATGCGATTTTCAGCCATC 478 ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 418 ACGTTGACTCGGGTTTGTGGGAGGATATGAGAATCTCGTCTCATGCGATTTTCAGCCATC 477 Query 479 AAGATTTCCAAAGTTTTTCGGTGAGTACAAGCGTAAGCAAATTAAGTCAAGGGCTTGTTC 538 ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct 478 AAGATTTCCAAAGTTTTTCGGTGAGCACAAGCGTAAGCAAATTAAGGCAAGGGCTTGTTC 537 Query 539 CTATTCTTGATAACGCTGTTGAGAAACACATTCTTGTCGACTTGCAAGATTTGTTCCAGA 598 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 538 CTATTCTTGATAACGCTGTTGAGAAACACATTCTTGTCGACTTGCAAGATGTGTTCCAGA 597 Query 599 GATTCTTGTTTGACACATCTTCTACTTTGATGGCTGGGTATGATCCAAAATCTCTCTCCG 658 |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| Sbjct 598 GATTCTTGTTTGACACATCTTCGACTTTGATGACTGGGTATGATCCAAAATCTCTCTCCA 657 Query 659 TTGAAATGCCTAAGGTTGAGTTCGCTGATGCGATGGATGGAGTTGCAGATGCCATGTTCT 718 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 658 TTGAAATGCCTAAGGTTGAGTTCGCTGATGCGATGGATGGAGTTGCAGATGCGATGTTCT 717 Query 719 ATAGACATCTCAAGCCGGCTTTCCTGT-GGAGTATCCAATCTTGGATCGGTGTAGGAATA 777 ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| || Sbjct 718 ATAGACATCTCAAGCCGGCTTTCCTGTGGGAG-CTCCAATCTTGGATCGGTGTAGGAGTA 776 Query 778 GAGAAGAAGATGAGAAGAGGTCTCGAC-GTTTTCGATCAAATGCTAGGGAAGATCATATC 836 ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct 777 GAGAAGAAGATGAGAAGAGGTCTCG-CGGTTTTCGATCAAATGCTAGGGAAGATCATATC 835 Query 837 AGCTAAACGAGAGGAGATCAAAAATCATGGGATTCATGACTC-AAAAG-GA-GAGGCCAT 893 |||||||||||||||||||||| |||||||||||||||||| ||| | || |||||||| Sbjct 836 GGCTAAACGAGAGGAGATCAAAAGTCATGGGATTCATGACTCGAAAGGAGAGGAGGCCAT 895 Query 894 GGACGTTTTAACATATTACATGACTATAGACACGACCAAATATAAACACTTGAAACCGAG 953 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 896 GGACGTTTTAACATATTACATGACTATAGACACGACCAAATATAAACACTTGAAACCGAG 955 Query 954 TAACGATAAATTCATCAGAGACACTATTTTGGGTCTTGTGATAGCGGCAAGAGACACAAC 1013 |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct 956 TAACGATAAATTCATCAGAGACACTATTTTGGGTTTTTTGATAGCGGCAAGAGACACAAC 1015 Query 1014 CAGCTCAGCTCTCACTTGGTTTTTCTGGCTTCTCTCTAAGAACCCTGAAGCAATGACCAA 1073 || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1016 AAGATCAGCTCTCACTTGGTTATTCTGGCTTCTCTCTAAGAACCCTGAAGCAATGACCAA 1075 Query 1074 GATCCGACAAGAGATTAACAAGAAGATGCCAAAGTTTGATCCGGCAGATTTAGACAAGCT 1133 ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| Sbjct 1076 GATCCGACAAGAGATTAACAAGAAGATGCCAAAGTTTAATCCCGCAGATTTAGACAAGCT 1135 Query 1134 CGTGTACCTAGACGGTGCCGTGTGTGAGACGCTAAGGCTATACCCATCAGTCCCATTCAA 1193 |||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| || Sbjct 1136 CGTGTATCTAGATGGTGCCGTGTGTGAAACGCTAAGGCTATACCCATCAGTCCCATTTAA 1195 Query 1194 CCACAAGTCACCGGCAAAGCCAGACGTGCTTCCAAGTGGTCATAAAGTTGATAAGAATTG 1253 |||||||||||||||||||||||| || ||||||||||| |||| ||| ||| ||||||| Sbjct 1196 CCACAAGTCACCGGCAAAGCCAGATGTTCTTCCAAGTGGGCATAGAGTCGATGAGAATTG 1255 Query 1254 GAGGGTAGTAATCCCTATTTATT-CATTAGGCAGGATGAAATCTGTTTGGGGAGATGACG 1312 |||||||||||||||||||| || || | || |||||||||||||||||||||||||||| Sbjct 1256 GAGGGTAGTAATCCCTATTT-TTGCAGTGGGGAGGATGAAATCTGTTTGGGGAGATGACG 1314 Query 1313 CAGAAGATTTTCGACCAGAGAGATGGATTTCAGACAGTGGAATGTTGAGACAAGAGTCTT 1372 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1315 CAGAAGATTTTCGACCAGAGAGATGGATTTCAGACAGTGGAATGTTGAGACAAGAATCTT 1374 Query 1373 CATATAAGTTTTTGGCGTTTAACGCTGGTCCAAGAACTTGCTTGGGGAAAAGATTAACAT 1432 |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1375 CATATAAGTTTTTGGCATTTAACGCTGGTCCAAGAACTTGCTTGGGGAAAAGGTTAACAT 1434 Query 1433 TCTTGCAGATGAAGACAGTAGCGGTCGAAATCATTAGAAACTATGACATTAAGGTCGTTG 1492 |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1435 TCTTGCAGGTGAAGACAGTAGCGGTCGAAATCATAAGAAACTATGACATTAAGGTCGTTG 1494 Query 1493 AAGGGCACAAACCAAAACCAGTTCCTTCCGTTCTTCTTCGCATGCAACATGGTCTCAAAG 1552 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1495 AAGGGCACAAACCCAAACCAGTTCCTTCCGTTCTTCTTCGCATGCAACATGGTCTCAAAG 1554 Query 1553 TTAGTGTCACTAAGATTTAGTGATA-TTTTATTTTTGTTTTATGTTACAATAAAATATTC 1611 ||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||| || Sbjct 1555 TTAGTGTCACTAAGATTTAGTGA-ACTTTTATTTTTGTTTTATGTTA-AATAAAATACTC 1612 Query 1612 CA-TTGTGAAAGAATATTTATGGGTAAAGATTTAGAACCTCATGataata 1660 || ||||||||| | ||| ||||||||||||| ||||||||||||||||| Sbjct 1613 CAGTTGTGAAAGGAGATTAATGGGTAAAGATTAAGAACCTCATGATAATA 1662 > Ahg475591 jgi|Araly1|475591|fgenesh2_kg.2__721__AT1G65340.1 Length=1380 Score = 1038 bits (562), Expect = 0.0 Identities = 835/966 (86%), Gaps = 21/966 (2%) Strand=Plus/Plus Query 378 GTTTAACAAGATCTTTGAATTCTTGGGAGATGGGATTTTCAACGTTGACTCGGGCTTGTG 437 |||||| |||||||||||| || |||| ||| |||||||||||||||||||| ||||| Sbjct 258 GTTTAAGAAGATCTTTGAAGTCGTGGGTGATTCCATTTTCAACGTTGACTCGGGTTTGTG 317 Query 438 GGAGGATATGAGAAACTCGTCTCATGCGATTTTCAGCCATCAAGATTTCCAAAGTTTTTC 497 |||||||||||| |||||||||||||| ||||| |||||||||||||||||||| || | Sbjct 318 GGAGGATATGAGGAACTCGTCTCATGCCATTTTTAGCCATCAAGATTTCCAAAGGTTCTG 377 Query 498 GGTGAGTA-CAAGCGTAAGCAAATTAAGTCAAGGGCTTGTTCCTATTCTTGATAACGCTG 556 |||||| | |||| |||| ||||||||| ||||||||||||||||||||||| ||| ||| Sbjct 378 GGTGAG-AGCAAGTGTAAACAAATTAAGGCAAGGGCTTGTTCCTATTCTTGAGAACACTG 436 Query 557 TTGAGAAACACATTCTTGTCGACTTGCAAGATTTGTTCCAGAGATTCTTGTTTGACACAT 616 ||| ||| | |||||||| ||||| ||||||||||||||||||||||||||||| |||| Sbjct 437 CTGATAAAAATATTCTTGTAGACTTCCAAGATTTGTTCCAGAGATTCTTGTTTGATACAT 496 Query 617 CTTCT-ACTTTGATGGCTGGGTATGATCCAAAATCTCTCTCCGTTGAAATGCCTAAGGTT 675 ||| | | ||||||| | |||||||||||||||| | | ||| ||||||||||||| || Sbjct 497 CTT-TGATTTTGATGACCGGGTATGATCCAAAATGTTTATCCATTGAAATGCCTAAAGTC 555 Query 676 GAGTTCGCTGATGCGATGGATGGAGTTGCAGATGCCATGTTCTATAGACATCTCAAGCCG 735 ||||| | ||| ||| | ||||| ||| |||| | | |||||||| ||| | |||||| Sbjct 556 GAGTTTGGTGACGCGGTTGATGGTGTTTCAGACGGGGTTTTCTATAGGCATGTTAAGCCG 615 Query 736 GCTTTCCTGTGGAG-TATCCAATCTTGGATCGGTGTAGGAATAGAGAAGAAGAT-GAGAA 793 | |||||||||||| | |||||| |||||| ||||||||| | |||||| ||| || || Sbjct 616 GTTTTCCTGTGGAGGT-TCCAATATTGGATTGGTGTAGGAGTCGAGAAGC-GATTGAAAA 673 Query 794 GAGGTCTCGACG-TTTTCGATCAAATGCTAGGGAAGATCATATC-AGCTAAACGAGAGGA 851 ||||||| | || ||||||||||| | || | |||||||||| | | | ||| ||||||| Sbjct 674 GAGGTCTTG-CGGTTTTCGATCAACTTCTTGAGAAGATCATAACGACCAAAA-GAGAGGA 731 Query 852 GATCAAAAATCATGGGA-T--TCATGACTCAAAAGGAGAGGCCATGGACGTTTTAACATA 908 |||||||| |||||||| | |||| |||||| |||||||||||| |||||||| ||||| Sbjct 732 GATCAAAAGTCATGGGACTGATCATCACTCAAGAGGAGAGGCCATAGACGTTTTGACATA 791 Query 909 TTACATGACTATAGACACGACCAAATATAA-ACACTTGAAACCGAGTAACGATAAATTCA 967 ||||||||| | ||||||||||| ||||| | |||||||||||||| | |||||||||| Sbjct 792 CTACATGACTGTGGACACGACCAAGTATAAGA-ACTTGAAACCGAGTGATGATAAATTCA 850 Query 968 TCAGAGACACTATTTTGGGTCTTGT-GATAGCGGCAAGAGACACAACCAGCTCAGCTCTC 1026 ||| |||||||||||||||| || | ||||||||||||||||||||| || ||||||||| Sbjct 851 TCAAAGACACTATTTTGGGT-TTCTTGATAGCGGCAAGAGACACAACAAGTTCAGCTCTC 909 Query 1027 ACTTGGTTTTTCTGGCTTCTCTCTAAGAACCCTGAAGCAATGACCAAGATCCGACAAGAG 1086 |||||||| ||||||||||| || ||||||||||||||||||| |||||| ||||||||| Sbjct 910 ACTTGGTTCTTCTGGCTTCTGTCCAAGAACCCTGAAGCAATGAACAAGATTCGACAAGAG 969 Query 1087 ATTAACAAGAAGATGCCAAAGTTTGATCCGGCAGATTTAGACAAGCTCGTGTACCTAGAC 1146 |||||||||||||||| | |||| |||| ||||||||||||||||||||||| ||| || Sbjct 970 GTTAACAAGAAGATGCCGAGGTTTAATCCCGCAGATTTAGACAAGCTCGTGTATCTACAC 1029 Query 1147 GGTGCCGTGTGTGAGACGCTAAGGCTATACCCATCAGTCCCATTCAACCACAAGTCACCG 1206 |||||||||||||||||||||||| |||| ||| |||||||||| ||||||||||||||| Sbjct 1030 GGTGCCGTGTGTGAGACGCTAAGGTTATATCCACCAGTCCCATTTAACCACAAGTCACCG 1089 Query 1207 GCAAAGCCAGACGTGCTTCCAAGTGGTCATAAAGTTGATAAGAATTGGAGGGTAGTAATC 1266 |||| ||||||||||||||||||||| |||||||| ||| ||||||||| | | || || Sbjct 1090 GCAATGCCAGACGTGCTTCCAAGTGGGCATAAAGTCGATGAGAATTGGAAGATTGTCATA 1149 Query 1267 CCTATTTATTCATTAGGCAGGATGAAATCTGTTTGGGGAGATGACGCAGAAGATTTTC-G 1325 |||| ||| ||||||| ||||||||||||||||||||||||||||| |||||||| | | Sbjct 1150 TCTATGTATGCATTAGGGAGGATGAAATCTGTTTGGGGAGATGACGCGGAAGATTT-CAG 1208 Query 1326 ACCAGA 1331 |||||| Sbjct 1209 ACCAGA 1214 > Ahg907906 jgi|Araly1|907906|Al_scaffold_0002_987 Length=1059 Score = 791 bits (428), Expect = 0.0 Identities = 574/644 (89%), Gaps = 11/644 (2%) Strand=Plus/Plus Query 935 ATAAAC-ACTTGAAACCGAGTAACGATAAATTCATCAGAGACACTATTTTGGGTCTT-GT 992 ||| || |||||||||| ||| | ||||||||||| | |||||||||||||||| || | Sbjct 421 ATAGACTACTTGAAACCAAGTGATGATAAATTCATTAAAGACACTATTTTGGGT-TTCTT 479 Query 993 GATAGCGGCAAGAGACACAACCAGCTCAGCTCTCACTTGGTTTTTCTGGCTTCTCTCTAA 1052 ||||| ||||||||||||||| || ||||||||||||||||| ||||||||||| || || Sbjct 480 GATAGTGGCAAGAGACACAACAAGTTCAGCTCTCACTTGGTTCTTCTGGCTTCTGTCCAA 539 Query 1053 GAACCCTGAAGCAATGACCAAGATCCGACAAGAGATTAACAAGAAGATGCCAAAGTTTGA 1112 ||||||||||||||||| |||||| ||||||||| |||||||||||||||| | |||||| Sbjct 540 GAACCCTGAAGCAATGAACAAGATTCGACAAGAGGTTAACAAGAAGATGCCGAGGTTTGA 599 Query 1113 TCCGGCAGATTTAGACAAGCTCGTGTACCTAGACGGTGCCGTGTGTGAGACGCTAAGGCT 1172 ||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||| | Sbjct 600 TCCCGCAGATTTAGACAAGCTCGTGTATCTACACGGTGCCGTGTGTGAGACGCTAAGGTT 659 Query 1173 ATACCCATCAGTCCCATTCAACCACAAGTCACCGGCAAAGCCAGACGTGCTTCCAAGTGG 1232 ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 660 ATACCCACCAGTCCCATTTAACCACAAGTCACCGGCAAAGCCAGACGTGCTTCCAAGTGG 719 Query 1233 TCATAAAGTTGATAAGAATTGGAGGGTAGTAATCCCTATTTATTCATTAGGCAGGATGAA 1292 |||||||| ||| ||||||||| | | || || |||| ||| ||||||| |||||||| Sbjct 720 GCATAAAGTCGATGAGAATTGGAAGATTGTCATATCTATGTATGCATTAGGGAGGATGAA 779 Query 1293 ATCTGTTTGGGGAGATGACGCAGAAGATTTTC-GACCAGAGAGATGGATTTCAGACAGTG 1351 ||||||||||||||||||||| |||||||| | |||||||||||||||||||| |||||| Sbjct 780 ATCTGTTTGGGGAGATGACGCGGAAGATTT-CAGACCAGAGAGATGGATTTCATACAGTG 838 Query 1352 GAATGTTGAGACAAGAGTCTTCATATAAGTTTTTGGCGTTTAACGCTGGTCCAAGAACTT 1411 ||| ||| | ||| || ||||||||||||| |||||||||||||||||||||||| ||| Sbjct 839 GAAGGTTAAAACATGAACCTTCATATAAGTTCTTGGCGTTTAACGCTGGTCCAAGAGCTT 898 Query 1412 GCTTGGGGAAAA-GATTAACATTCTTGCAGATGAAGACAGTAGCGGTCGAAATCATTA-G 1469 ||||||| |||| | ||||| |||||||||||||||||||| || || |||||||| | | Sbjct 899 GCTTGGGAAAAAAG-TTAACGTTCTTGCAGATGAAGACAGTGGCTGTGGAAATCAT-ACG 956 Query 1470 AAACTATGACATTAAGGTCGTTGAAGGGCACAAA-CCAAAACCAGTTCCTTCCGTTCTTC 1528 |||||||||||| ||||||||||||||||||||| || || || |||||||| |||||| Sbjct 957 AAACTATGACATCAAGGTCGTTGAAGGGCACAAAACCGAA-CCTGTTCCTTCTGTTCTTT 1015 Query 1529 TTCGCATGCAACATGGTCTCAAAGTTAGTGTCACTAAGATTTAG 1572 ||||||||||||||||||||||||||| | |||||||||| ||| Sbjct 1016 TTCGCATGCAACATGGTCTCAAAGTTAATATCACTAAGATCTAG 1059 Score = 374 bits (202), Expect = 2e-102 Identities = 342/407 (84%), Gaps = 19/407 (5%) Strand=Plus/Plus Query 502 AGTACAAGCGTAAGCAAATTAAGTCAAGGGCTTGTTCCTATTCTTGATAACGCTGTTGAG 561 |||||||| |||| ||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct 28 AGTACAAGTGTAAACAAATTAAGGCAAGGGCTTGTTCCTATTCTTGAGAACGCTGTTGAT 87 Query 562 AAACACATTCTTGTCGACTTGCAAGATTTGTTCCAGAGATTCTTGTTTGACACATCTTCT 621 ||| | || |||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 88 AAAAATATCCTTGTCGACTTGCAAGATGTGTTCCAGAGATTCTTGTTTGACACATCTT-T 146 Query 622 -ACTTTGATGGCTGGGTATGATCCAAAATCTCTCTCCGTTGAAATGCCTAAGGTTGAGTT 680 | ||||||| | |||||||||||||||| | | || |||||||||||||||||||||| Sbjct 147 GATTTTGATGTCCGGGTATGATCCAAAATGTTTATCTATTGAAATGCCTAAGGTTGAGTT 206 Query 681 CGCTGATGC-GATGGATGGAGT-T--G-CAGATGCCATGTTCTATAGACATCTCAAGCCG 735 || ||| || | | ||||| || | | |||| | | |||||||||||| |||||||| Sbjct 207 CGGTGACGCAG-TAGATGGTGTCTCTGACAGA-GT--T-TTCTATAGACATGTCAAGCCG 261 Query 736 GCTTTCCTGTGGAGTATCCAATCTTGGATCGGTGTAGGAATAGAGAAGAAGAT-GAGAAG 794 | |||| ||||||| |||||| |||||| ||||||||| | ||||| ||||| || ||| Sbjct 262 GTTTTCTTGTGGAGGCTCCAATATTGGATTGGTGTAGGACTCGAGAA-AAGATTGAAAAG 320 Query 795 AGGTCTCGACG-TTTTCGATCAAATGCTAGGGAAGATCATATCAGCTAAACGAGAGGAGA 853 |||||| | || ||||||||||| | || | |||||||||| | |||||| ||||||||| Sbjct 321 AGGTCTTG-CGGTTTTCGATCAACTTCTCGAGAAGATCATAACGGCTAAAAGAGAGGAGA 379 Query 854 TCAAAAATCATGGGATTCA---TGACTCAAAAGGAGAGGCCATGGAC 897 |||||| || ||||| ||| | |||||| |||||||||||| ||| Sbjct 380 TCAAAAGTCTTGGGACTCAACATCACTCAAGAGGAGAGGCCATAGAC 426 > Ahg925517 jgi|Araly1|925517|scaffold_201078.1 Length=671 Score = 747 bits (404), Expect = 0.0 Identities = 544/611 (89%), Gaps = 12/611 (2%) Strand=Plus/Plus Query 987 TCTTGTGATAGCGGCAAGAGACACAACCAGCTCAGCTCTCACTTGGTTTTTCTGGCTTCT 1046 ||||||| || |||||||||||||| || ||||||||||||||||| ||||||||||| Sbjct 67 TCTTGTG-GAGTGGCAAGAGACACAATAAGTTCAGCTCTCACTTGGTTCTTCTGGCTTCT 125 Query 1047 CTCTAAGAACCCTGAAGCAATGACCAAGATCCGACAAGAGATTAACAAGAAGATGCCAAA 1106 || ||||||||||||||||||| |||||| ||||||||| |||||||||||||||| | Sbjct 126 GTCCAAGAACCCTGAAGCAATGAACAAGATTCGACAAGAGGTTAACAAGAAGATGCCGAG 185 Query 1107 GTTTGATCCGGCAGATTTAGACAAGCTCGTGTACCTAGACGGTGCCGTGTGTGAGACGCT 1166 ||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct 186 GTTTGATCCCGCAGATTTAGACAAGCTCGTGTATCTACACGGTGCCGTGTGTGAGACGCT 245 Query 1167 AAGGCTATACCCATCAGTCCCATTCAACCACAAGTCACCGGCAAAGCCAGACGTGCTTCC 1226 |||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 246 AAGGTTATACCCACCAGTCCCATTTAACCACAAGTCACCGGCAAAGCCAGACGTGCTTCC 305 Query 1227 AAGTGGTCATAAAGTTGATAAGAATTGGAGGGTAGTAATCCCTATTTATTCATTAGGCAG 1286 |||||| |||||||| ||| ||||||||| | | || || |||| ||| ||||||| || Sbjct 306 AAGTGGGCATAAAGTCGATGAGAATTGGAAGATTGTCATATCTATGTATGCATTAGGGAG 365 Query 1287 GATGAAATCTGTTTGGGGAGATGACGCAGAAGATTTTC-GACCAGAGAGATGGATTTCAG 1345 ||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||| Sbjct 366 GATGAAATCTGTTTGGGGAGATGACGCGGAAGATTT-CAGACCAGAGAGATGGATTTCAT 424 Query 1346 ACAGTGGAATGTTGAGACAAGAGTCTTCATATAAGTTTTTGGCGTTTAACGCTGGTCCAA 1405 ||||||||| ||| | |||||| ||||||||||||| |||||||||||||||||||||| Sbjct 425 ACAGTGGAAGGTTAAAACAAGAACCTTCATATAAGTTCTTGGCGTTTAACGCTGGTCCAA 484 Query 1406 GAACTTGCTTGGGGAAAA-GATTAACATTCTTGCAGATGAAGACAGTAGCGGTCG-AAAT 1463 || |||||||||| |||| | ||||| |||||||||||||||||||| || | || |||| Sbjct 485 GAGCTTGCTTGGGAAAAAAG-TTAACGTTCTTGCAGATGAAGACAGTGGCTG-CGGAAAT 542 Query 1464 CATTA-GAAACTATGACATTAAGGTCGTTGAAGGGCACAAA-CCAAAACCAGTTCCTTCC 1521 ||| | ||||||||||||| ||||||||||||||||||||| || || || |||||||| Sbjct 543 CAT-ACGAAACTATGACATCAAGGTCGTTGAAGGGCACAAAACCGAA-CCTGTTCCTTCT 600 Query 1522 GTTCTTCTTCGCATGCAACATGGTCTCAAAGTTAGTGTCACTAAGATTTAGTGATA-TTT 1580 |||||| ||||||||||||||||||||||||||| | |||||||||| |||| | | ||| Sbjct 601 GTTCTTTTTCGCATGCAACATGGTCTCAAAGTTAATATCACTAAGATCTAGTAACAGTTT 660 Query 1581 TATTTTTGTTT 1591 ||||||| ||| Sbjct 661 TATTTTTATTT 671 > Ahg338681 jgi|Araly1|338681|fgenesh1_pg.C_scaffold_2000780 Length=771 Score = 728 bits (394), Expect = 0.0 Identities = 519/579 (90%), Gaps = 10/579 (2%) Strand=Plus/Plus Query 999 GGCAAGAGACACAACCAGCTCAGCTCTCACTTGGTTTTTCTGGCTTCTCTCTAAGAACCC 1058 ||||||||||||||| || ||||||||||||||||| ||||||||||| || |||||||| Sbjct 198 GGCAAGAGACACAACAAGTTCAGCTCTCACTTGGTTCTTCTGGCTTCTGTCCAAGAACCC 257 Query 1059 TGAAGCAATGACCAAGATCCGACAAGAGATTAACAAGAAGATGCCAAAGTTTGATCCGGC 1118 ||||||||||| |||||| ||||||||| |||||||||||||||| | ||||||||| || Sbjct 258 TGAAGCAATGAACAAGATTCGACAAGAGGTTAACAAGAAGATGCCGAGGTTTGATCCCGC 317 Query 1119 AGATTTAGACAAGCTCGTGTACCTAGACGGTGCCGTGTGTGAGACGCTAAGGCTATACCC 1178 ||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||| Sbjct 318 AGATTTAGACAAGCTCGTGTATCTACACGGTGCCGTGTGTGAGACGCTAAGGTTATACCC 377 Query 1179 ATCAGTCCCATTCAACCACAAGTCACCGGCAAAGCCAGACGTGCTTCCAAGTGGTCATAA 1238 | |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 378 ACCAGTCCCATTTAACCACAAGTCACCGGCAAAGCCAGACGTGCTTCCAAGTGGGCATAA 437 Query 1239 AGTTGATAAGAATTGGAGGGTAGTAATCCCTATTTATTCATTAGGCAGGATGAAATCTGT 1298 ||| ||| ||||||||| | | || || |||| ||| ||||||| |||||||||||||| Sbjct 438 AGTCGATGAGAATTGGAAGATTGTCATATCTATGTATGCATTAGGGAGGATGAAATCTGT 497 Query 1299 TTGGGGAGATGACGCAGAAGATTTTC-GACCAGAGAGATGGATTTCAGACAGTGGAATGT 1357 ||||||||||||||| |||||||| | |||||||||||||||||||| ||||||||| || Sbjct 498 TTGGGGAGATGACGCGGAAGATTT-CAGACCAGAGAGATGGATTTCATACAGTGGAAGGT 556 Query 1358 TGAGACAAGAGTCTTCATATAAGTTTTTGGCGTTTAACGCTGGTCCAAGAACTTGCTTGG 1417 | | ||| || ||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct 557 TAAAACATGAACCTTCATATAAGTTCTTGGCGTTTAACGCTGGTCCAAGAGCTTGCTTGG 616 Query 1418 GGAAAA-GATTAACATTCTTGCAGATGAAGACAGTAGCGGTCG-AAATCATTA-GAAACT 1474 | |||| | ||||| |||||||||||||||||||| || | || ||||||| | |||||| Sbjct 617 GAAAAAAG-TTAACGTTCTTGCAGATGAAGACAGTGGCTG-CGGAAATCAT-ACGAAACT 673 Query 1475 ATGACATTAAGGTCGTTGAAGGGCACAAA-CCAAAACCAGTTCCTTCCGTTCTTCTTCGC 1533 ||||||| ||||||||||||||||||||| || || || |||||||| |||||| ||||| Sbjct 674 ATGACATCAAGGTCGTTGAAGGGCACAAAACCGAA-CCTGTTCCTTCTGTTCTTTTTCGC 732 Query 1534 ATGCAACATGGTCTCAAAGTTAGTGTCACTAAGATTTAG 1572 |||||||||||||||||||||| | |||||||||| ||| Sbjct 733 ATGCAACATGGTCTCAAAGTTAATATCACTAAGATCTAG 771 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 63953521355 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5