BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G52990.1 Length=1360 Score E Sequences producing significant alignments: (Bits) Value Ahg495365 jgi|Araly1|495365|fgenesh2_kg.8__1181__AT5G52990.1 1504 0.0 Ahg949878 jgi|Araly1|949878|scaffold_801765.1 1092 0.0 Ahg916929 jgi|Araly1|916929|Al_scaffold_0008_1680 747 0.0 Ahg481613 jgi|Araly1|481613|fgenesh2_kg.4__673__AT5G52990.1 702 0.0 > Ahg495365 jgi|Araly1|495365|fgenesh2_kg.8__1181__AT5G52990.1 Length=1238 Score = 1504 bits (814), Expect = 0.0 Identities = 921/971 (95%), Gaps = 14/971 (1%) Strand=Plus/Plus Query 234 ttttCGCTTCG-ATCTCCATTGAAAAGGATGATTTCAAATCCAAGTTTATTATCGTACAC 292 |||| |||||| ||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct 161 TTTT-GCTTCGAATCTCCATTGAAAAGGATGATTTCAAATCCAAGTTTATTGTCTTACAC 219 Query 293 TTGCATTGCGAAAGGAACCGTAGTTCTCGCGGAGTTCGTTT-CAAGGCAAGAGCCAGGAA 351 |||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||| Sbjct 220 TTGCATTGCGAAAGGAACCGTAGTTCTCGCTGAGTTCGTTTCCAAGG-AAGAGCCAGGAA 278 Query 352 TCGAAGCTATAGCTTTACGATGCATCGAGAACACGCCTCCTCATCATTCAATGTTTTCTC 411 |||||||| ||||||||||||| ||||||||||||||||| |||||||||||||| |||| Sbjct 279 TCGAAGCTGTAGCTTTACGATGTATCGAGAACACGCCTCCACATCATTCAATGTTCTCTC 338 Query 412 ATACAGTTCACAAGAAGACGTATACATTCGCAATCGACGATGATTCCTTTGTTTATTTCT 471 |||||||||||||||||| ||| |||||||||||||| |||||||| |||||||||||| Sbjct 339 ATACAGTTCACAAGAAGAGGTACACATTCGCAATCGATGATGATTCGTTTGTTTATTTCG 398 Query 472 CGATTTCT-GATGAATCCATGGAGAAACCTGAATCATTCTGGGTTTTGAATCGTTTGAGA 530 |||||| | |||||| |||||||||||||||||||||||||||||||||||| ||||| Sbjct 399 CGATTT-TGGATGAAAGTATGGAGAAACCTGAATCATTCTGGGTTTTGAATCGTCTGAGA 457 Query 531 TCAGCTATTGAAGATCTGATTAAAGACGGTGGATCTGATGTTGAGACGCTGATTAATCCT 590 |||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||| Sbjct 458 TCAGCTATTGAAGATCTGATTAGAGACGGTGGATCTGATGTTGAAACGTTGATTAATCCG 517 Query 591 GTTTCTCATTGTCTTCAATTGAAGCTTGATCCAGTTTTCGCTGAGATTGTTGGTGTTGTT 650 ||||| || ||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct 518 GTTTCGCACTGTCTTCAATTGAAGATTGATCCAATTTTCGCTGAGATTGTTGGTGTTGTT 577 Query 651 GATTTGGAATTATTGGATATGGATTTGGTTGGATCACCGAGGAGTGTAGCGAGAGAGAGT 710 ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 578 GATTTGG-A--ATTGGATATGGATTTGGTTGGATCACCGAGGAGTGTAGCGAGAGAGAGT 634 Query 711 CGAAATCCGAGTATTGATTCATCTAAAGGAAGAAGAGCTGCTTTGATGCCACTTTTGGGG 770 || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 635 CGGAATCCGAGTATTGATTCGTCTAAAGGAAGAAGAGCTGCTTTGATGCCACTTTTGGGG 694 Query 771 AAACCATTGAAGGCGTTGAAGAAGAAGAAGAGATTGCATAATGAAGCAAAAGGGGGAGAT 830 || |||||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct 695 AAGCCATTGAAGGCGTTGAAGAAGAAGAAGAGATTGCATAATGAAGCAAAAGGAGAAGAT 754 Query 831 TCTTGTGAGGTTGGTTCGATTCAGGAGATATCAGAGAAGAATGTTGATTTATGTGGGAAT 890 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 755 TCTTGTGAGGTTGGTTCGATTCAGGAGATATCAGAGAAGAATGTTGATTTATGTGGGAAT 814 Query 891 GGTAATAATGGAGTCTTACGCAAGGAACTGAGAAATGGTTTGTTGAGTGATCATCATCAT 950 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 815 GGTAACAATGGAGTCTTACGCAAGGAACTGAGAAATGGTTTGTTGAGTGATCATCATCAT 874 Query 951 AGACAAAAGGCGAAACAGATTTGGAAGAAACATGTTTGGGTTGTGTTGATGTTTGATTTC 1010 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 875 AGACAAAAGGCGAAACAGATATGGAAGAAACATGTTTGGGTTGTGTTGATGTTTGATTTC 934 Query 1011 TGCATCTGTGCTGTTTTGTTTGGAATTTGGCTTTGGATTTGTGAAGGGTTTCAATGCATT 1070 ||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||| Sbjct 935 TGCATCTGTGCTGTTTTATTTGGAATCTGGCTTTGGATTTGTGAAGGGTTTCAGTGCATT 994 Query 1071 CAAGGGTAAAAGTTATCATCATCTGTGTACATCTCCAAATTCATATTCTTTGAATCTGCA 1130 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 995 CAAGGGTAAAAGTTATCATCATCTGTGTACATCTCCAAATTCATATTGTTTGAATCTGCA 1054 Query 1131 TCAAAATTTGATCATTTGACATCTT-TTTT--CTGGGTATCCGtttttttGGATCAAATC 1187 |||||||||||||||| |||||||| |||| |||||||| |||||||| |||||||||| Sbjct 1055 TCAAAATTTGATCATT-GACATCTTCTTTTTTCTGGGTATTCGTTTTTT-GGATCAAATC 1112 Query 1188 TGATCCCTTTT 1198 ||||||||||| Sbjct 1113 TGATCCCTTTT 1123 Score = 122 bits (66), Expect = 5e-27 Identities = 85/94 (90%), Gaps = 2/94 (2%) Strand=Plus/Plus Query 1 TTTCGTCTTCTCCAATAATGATCTCCATTTCTGTTATTTTCCCTAGAAATTTTCGCAAAC 60 |||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||| Sbjct 1 TTTCGTCTTCTCCAATAATGCTCTCCATTTCTGTTATTTTCCCTAGAAAAATCCGCAAAC 60 Query 61 CCTAAAAAGAGAGAGAAACATAAAAATCTCCATT 94 |||| | ||||||||||| | |||||||||||| Sbjct 61 CCTAGAGAGAGAGAGAAA--TCAAAATCTCCATT 92 > Ahg949878 jgi|Araly1|949878|scaffold_801765.1 Length=794 Score = 1092 bits (591), Expect = 0.0 Identities = 686/731 (94%), Gaps = 9/731 (1%) Strand=Plus/Plus Query 257 AAGGATGATTTCAAATCCAAGTTTATTATCGTACACTTGCATTGCGAAAGGAACCGTAGT 316 ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct 18 AAGGATGATTTCAAATCCAAGTTTATTGTCTTACACTTGCATTGCGAAAGGAACCGTAGT 77 Query 317 TCTCGCGGAGTTCGTTT-CAAGGCAAGAGCCAGGAATCGAAGCTATAGCTTTACGATGCA 375 |||||| |||||||||| ||||| |||||||||||||||||||| ||||||||||||| | Sbjct 78 TCTCGCTGAGTTCGTTTCCAAGG-AAGAGCCAGGAATCGAAGCTGTAGCTTTACGATGTA 136 Query 376 TCGAGAACACGCCTCCTCATCATTCAATGTTTTCTCATACAGTTCACAAGAAGACGTATA 435 |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| | Sbjct 137 TCGAGAACACGCCTCCACATCATTCAATGTTCTCTCATACAGTTCACAAGAAGACGTACA 196 Query 436 CATTCGCAATCGACGATGATTCCTTTGTTTATTTCTCGATTTCT-GATGAATCCATGGAG 494 ||||||||||||| |||||||| |||||||||||| |||||| | |||||| |||||| Sbjct 197 CATTCGCAATCGATGATGATTCGTTTGTTTATTTCGCGATTT-TGGATGAAAGTATGGAG 255 Query 495 AAACCTGAATCATTCTGGGTTTTGAATCGTTTGAGATCAGCTATTGAAGATCTGATTAAA 554 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 256 AAACCTGAATCATTCTGGGTTTTGAATCGTTTGAGATCAGCTATTGAAGATCTGATTAAT 315 Query 555 GACGGTGGATCTGATGTTGAGACGCTGATTAATCCTGTTTCTCATTGTCTTCAATTGAAG 614 |||||||||||||||||||| ||| |||||||||| ||||| || ||||||||||||||| Sbjct 316 GACGGTGGATCTGATGTTGAAACGTTGATTAATCCGGTTTCGCACTGTCTTCAATTGAAG 375 Query 615 CTTGATCCAGTTTTCGCTGAGATTGTTGGTGTTGTTGATTTGGAATTATTGGATATGGAT 674 |||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||| Sbjct 376 ATTGATCCAGTTTTCGCGGAGATTGTTGGTGTTGTTGATTTGGAATT---GGACATGGAT 432 Query 675 TTGGTTGGATCACCGAGGAGTGTAGCGAGAGAGAGTCGAAATCCGAGTATTGATTCATCT 734 |||||||||||||| ||||| ||||||||||||||||| |||||||||||||| |||||| Sbjct 433 TTGGTTGGATCACCAAGGAGCGTAGCGAGAGAGAGTCGGAATCCGAGTATTGACTCATCT 492 Query 735 AAAGGAAGAAGAGCTGCTTTGATGCCACTTTTGGGGAAACCATTGAAGGCGTTGAAGAAG 794 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 493 AAAGGAAGAAGAGCTGCTTTGATGCCACTTTTGGGGAAGCCATTGAAGGCGTTGAAGAAG 552 Query 795 AAGAAGAGATTGCATAATGAAGCAAAAGGGGGAGATTCTTGTGAGGTTGGTTCGATTCA- 853 ||||||||||||||||||||||||||||| | |||| | ||||||||||||||||| || Sbjct 553 AAGAAGAGATTGCATAATGAAGCAAAAGGAGAAGATCCGTGTGAGGTTGGTTCGAT-CAA 611 Query 854 GGAGATATCAGAGAAGAATGTTGATTTATGTGGGAATGGTAATAATGGAGTCTTACGCAA 913 ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| Sbjct 612 GGAGATATCAGAGAAGAATGTTGATGTATGTGGGAATGGTAACAATGGAGTCTTACGCAA 671 Query 914 GGAACTGAGAAATGGTTTGTTGAGTGATCATCATCATAGACAAAAGGCGAAACAGATTTG 973 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct 672 GGAACTGAGAAATGGTTTGTTAAGTGATCATCATCATAGACAAAAGGCGAAACAGATATG 731 Query 974 GAAGAAACATG 984 ||||||||||| Sbjct 732 GAAGAAACATG 742 > Ahg916929 jgi|Araly1|916929|Al_scaffold_0008_1680 Length=714 Score = 747 bits (404), Expect = 0.0 Identities = 446/466 (96%), Gaps = 3/466 (1%) Strand=Plus/Plus Query 614 GCTTGATCCAGTTTTCGCTGAGATTGTTGGTGTTGTTGATTTGGAATTATTGGATATGGA 673 |||||||||| ||||||||||||||||||||||||||||||| | | |||||||||||| Sbjct 252 GCTTGATCCAATTTTCGCTGAGATTGTTGGTGTTGTTGATTTTG-A--ATTGGATATGGA 308 Query 674 TTTGGTTGGATCACCGAGGAGTGTAGCGAGAGAGAGTCGAAATCCGAGTATTGATTCATC 733 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct 309 TTTGGTTGGATCACCGAGGAGTGTAGCGAGAGAGAGTCGGAATCCGAGTATTGATTCGTC 368 Query 734 TAAAGGAAGAAGAGCTGCTTTGATGCCACTTTTGGGGAAACCATTGAAGGCGTTGAAGAA 793 ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct 369 TAAAGGAAGAAGAGCTGCTTTGATGCCACTTTTGGGGAAGCCATTGAAAGCGTTGAAGAA 428 Query 794 GAAGAAGAGATTGCATAATGAAGCAAAAGGGGGAGATTCTTGTGAGGTTGGTTCGATTCA 853 ||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||| Sbjct 429 GAAGAAGAGATTGCATAATGAAGGAAAAGGAGAAGATTCTTGTGAGGTTGGTTCGATTCA 488 Query 854 GGAGATATCAGAGAAGAATGTTGATTTATGTGGGAATGGTAATAATGGAGTCTTACGCAA 913 ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| Sbjct 489 GGAGATATCAGAGAAGAATGTTGATGTATGTGGGAATGGTAACAATGGAGTCTTACGCAA 548 Query 914 GGAACTGAGAAATGGTTTGTTGAGTGATCATCATCATAGACAAAAGGCGAAACAGATTTG 973 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 549 GGAACTGAGAAATGGTTTGTTGAGTGATCATCATCATAGACAAAAGGCGAAACAGATATG 608 Query 974 GAAGAAACATGTTTGGGTTGTGTTGATGTTTGATTTCTGCATCTGTGCTGTTTTGTTTGG 1033 ||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||| Sbjct 609 GAAGAAACATGTTTGGGTTGTGTTGATGTTTGATTTCTGCATCTGTGCTATTCTATTTGG 668 Query 1034 AATTTGGCTTTGGATTTGTGAAGGGTTTCAATGCATTCAAGGGTAA 1079 ||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct 669 AATCTGGCTTTGGATTTGTGAAGGGTTTCAATGCATTGAAGGGTAA 714 Score = 399 bits (216), Expect = 2e-110 Identities = 240/252 (95%), Gaps = 0/252 (0%) Strand=Plus/Plus Query 261 ATGATTTCAAATCCAAGTTTATTATCGTACACTTGCATTGCGAAAGGAACCGTAGTTCTC 320 ||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||| Sbjct 1 ATGATTTCAAATCCAAGTTTATTGTCATACACTTGCATTGCGAAAGGAACCGTAATTCTC 60 Query 321 GCGGAGTTCGTTTCAAGGCAAGAGCCAGGAATCGAAGCTATAGCTTTACGATGCATCGAG 380 || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 61 GCTGAGTTCGTTTCAAGGCAAGAGCCAGGAATCGAAGCTATAGCTTTAAGATGCATCGAG 120 Query 381 AACACGCCTCCTCATCATTCAATGTTTTCTCATACAGTTCACAAGAAGACGTATACATTC 440 |||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||| Sbjct 121 AACACGCCTCCTCATCATTCAATGTTCTCTCATACAGTTCACAAGAAGACATACACATTC 180 Query 441 GCAATCGACGATGATTCCTTTGTTTATTTCTCGATTTCTGATGAATCCATGGAGAAACCT 500 ||||||||||||||||||||||||| |||| |||||||||||||| | |||||||||||| Sbjct 181 GCAATCGACGATGATTCCTTTGTTTCTTTCGCGATTTCTGATGAAACTATGGAGAAACCT 240 Query 501 GAATCATTCTGG 512 |||||||||||| Sbjct 241 GAATCATTCTGG 252 > Ahg481613 jgi|Araly1|481613|fgenesh2_kg.4__673__AT5G52990.1 Length=1200 Score = 702 bits (380), Expect = 0.0 Identities = 447/477 (94%), Gaps = 14/477 (3%) Strand=Plus/Plus Query 692 GAGTGTAGC--GAGAGAGAGTCGAAATCCGAGTATTGATTCATCTAAAGGAAGAAGAGCT 749 ||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 581 GAGCGTAGCGAGAGAGAGAGTCGGAATCCGAGTATTGATTCATCTAAAGGAAGAAGAGCT 640 Query 750 GCTTTGATGCCACTTTTGGGGAAACCATTGAAGGCGTT------GAAGAAGAAGAAGAGA 803 || |||||||||||||||||||| ||||||| |||||| |||||||||||||||| Sbjct 641 GCGTTGATGCCACTTTTGGGGAAGCCATTGATGGCGTTGAAGAAGAAGAAGAAGAAGAGA 700 Query 804 TTGCATAATGAAGCAAAAGGGGGAGATTCTTGTGAGGTTGGTTCGATTC-AGGAGATATC 862 |||||||||||||||||||| |||||| |||||||||||||||| || |||||||||| Sbjct 701 TTGCATAATGAAGCAAAAGGACAAGATTCGTGTGAGGTTGGTTCGA-TCAAGGAGATATC 759 Query 863 AGAGAAGAATGTTGATTTATGTGGGAATGGTAATAATGGAGTCTTACGCAAGGAACTGAG 922 |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| Sbjct 760 AGAGAAGAATGTTGATGTATGTGGGAATGGTAACAATGGAGTCTTACGCAAGGAACTGAG 819 Query 923 AAATGGTTTGTTGAGTGATCATCATCATAGACAAAAGGCGAAACAGATTTGGAAGAAACA 982 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 820 AAATGGTTTGTTGAGTGATCATCATCATAGACAAAAGGCGAAACAGATATGGAAGAAACA 879 Query 983 TGTTTGGGTTGTGTTGATGTTTGATTTCTGCATCTGTGCTGTTTTGTTTGGAATTTGGCT 1042 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct 880 TGTTTGGGTTGTGTTGATGTTTGATTTCTGCATCTGTGCTGTTTTATTTGGAATCTGGCT 939 Query 1043 TTGGATTTGTGAAGGGTTTCAATGCATTCAAGGGTAAAAGTTATCATCATCTGTGTACAT 1102 |||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||| Sbjct 940 TTGGATTTGTGAAGGGTTTCAATGTATTCAAGGGTAAAAGTTATCATC-T--GTGTACAT 996 Query 1103 CTCCAAATTCATATTCTTTGAATCTGCATCAAAATTTGATCATTTGACATCTTTTTT 1159 ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| Sbjct 997 CTCCAAATTCATATTGTTTGAATCTGCATCAAAATTTGATCATT-GACATCTTTTTT 1052 Score = 621 bits (336), Expect = 4e-177 Identities = 395/423 (93%), Gaps = 6/423 (1%) Strand=Plus/Plus Query 234 ttttCGCTTCG-ATCTCCATTGAAAAGGATGATTTCAAATCCAAGTTTATTATCGTACAC 292 |||| |||||| ||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct 161 TTTT-GCTTCGAATCTCCATTGAAAAGGATGATTTCAAATCCAAGTTTATTGTCTTACAC 219 Query 293 TTGCATTGCGAAAGGAACCGTAGTTCTCGCGGAGTTCGTTTC-AAGGCAAGAGCCAGGAA 351 |||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||| Sbjct 220 TTGCATTGCGAAAGGAACCGTAGTTCTCGCTGAGTTCGTTTCCAAGG-AAGAGCCAGGAA 278 Query 352 TCGAAGCTATAGCTTTACGATGCATCGAGAACACGCCTCCTCATCATTCAATGTTTTCTC 411 |||||||| ||||||||||||| ||||||||||||||||| |||||||||||||| |||| Sbjct 279 TCGAAGCTGTAGCTTTACGATGTATCGAGAACACGCCTCCACATCATTCAATGTTCTCTC 338 Query 412 ATACAGTTCACAAGAAGACGTATACATTCGCAATCGACGATGATTCCTTTGTTTATTTCT 471 |||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||| Sbjct 339 ATACAGTTCACAAGAAGACGTACACATTCGCAATCGATGATGATTCGTTTGTTTATTTCG 398 Query 472 CGATTTCTG-ATGAATCCATGGAGAAACCTGAATCATTCTGGGTTTTGAATCGTTTGAGA 530 |||||| || ||||| |||||||||||||||||||||||||||||||||||| ||||| Sbjct 399 CGATTT-TGGATGAAAGTATGGAGAAACCTGAATCATTCTGGGTTTTGAATCGTCTGAGA 457 Query 531 TCAGCTATTGAAGATCTGATTAAAGACGGTGGATCTGATGTTGAGACGCTGATTAATCCT 590 |||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||| Sbjct 458 TCAGCTATTGAAGATCTGATTAGAGACGGTGGATCTGATGTTGAAACGTTGATTAATCCT 517 Query 591 GTTTCTCATTGTCTTCAATTGAAGCTTGATCCAGTTTTCGCTGAGATTGTTGGTGTTGTT 650 ||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct 518 GTTTCGCATTGTCTTCAATCAAAGCTTGATCCAGTTTTCGCGGAGATTGTTGGTGTTGTT 577 Query 651 GAT 653 ||| Sbjct 578 GAT 580 Score = 172 bits (93), Expect = 5e-42 Identities = 116/126 (92%), Gaps = 5/126 (4%) Strand=Plus/Plus Query 1235 TTTGATTTTTAAAGTCGCAAAAAGTGTTGTTTCCAGGAGGAAAACTAGGG----TATAGA 1290 ||| |||||||||||| ||||||||||||||||||||||| ||||||||| ||||| Sbjct 1076 TTTTATTTTTAAAGTCACAAAAAGTGTTGTTTCCAGGAGG-AAACTAGGGTATATATAGG 1134 Query 1291 TTGAATCCTGGTTTACATGTTAATGATGTTGTTAATTGTACTTTGGAAGTTAAATCATTC 1350 |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| Sbjct 1135 TTGAATCCTGGTTTACATGTTAGTGATGTTGTTCATTGTACTTTGGAAGTTAAATCATTC 1194 Query 1351 ACAAGC 1356 |||||| Sbjct 1195 ACAAGC 1200 Score = 128 bits (69), Expect = 1e-28 Identities = 86/94 (91%), Gaps = 2/94 (2%) Strand=Plus/Plus Query 1 TTTCGTCTTCTCCAATAATGATCTCCATTTCTGTTATTTTCCCTAGAAATTTTCGCAAAC 60 |||||||||||||||||||| |||||||||||||||||||||||||||| || ||||||| Sbjct 1 TTTCGTCTTCTCCAATAATGCTCTCCATTTCTGTTATTTTCCCTAGAAAATTCCGCAAAC 60 Query 61 CCTAAAAAGAGAGAGAAACATAAAAATCTCCATT 94 |||| | ||||||||||| | |||||||||||| Sbjct 61 CCTAGAGAGAGAGAGAAA--TCAAAATCTCCATT 92 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 50894094195 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5