BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G53010.1
Length=3458
Score E
Sequences producing significant alignments: (Bits) Value
Ahg949869 jgi|Araly1|949869|scaffold_801756.1 2098 0.0
Ahg949877 jgi|Araly1|949877|scaffold_801764.1 1402 0.0
Ahg949876 jgi|Araly1|949876|scaffold_801763.1 867 0.0
Ahg900413 jgi|Araly1|900413|Al_scaffold_0004_1063 676 0.0
Ahg933115 jgi|Araly1|933115|scaffold_401103.1 292 9e-78
Ahg933109 jgi|Araly1|933109|scaffold_401097.1 281 2e-74
Ahg949868 jgi|Araly1|949868|scaffold_801755.1 241 3e-62
Ahg900409 jgi|Araly1|900409|Al_scaffold_0004_1059 71.3 5e-11
> Ahg949869 jgi|Araly1|949869|scaffold_801756.1
Length=3232
Score = 2098 bits (1136), Expect = 0.0
Identities = 1393/1514 (92%), Gaps = 30/1514 (2%)
Strand=Plus/Plus
Query 1304 GATACTTTAGTGG-TGTGACCAAAAAATCAGATGGAACTCCAATGTTTATCTACGGAATT 1362
||||||||||||| || ||||||||||||||||||||||||||||||||| || |||||
Sbjct 1264 GATACTTTAGTGGTTG-GACCAAAAAATCAGATGGAACTCCAATGTTTATTTATGGAATC 1322
Query 1363 ACCACTGCCGATGAAGCAATAGAATTTGTGATCACATCCCTGAGTTTTGGGATTGCGACA 1422
|| ||||| |||||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct 1323 ACTACTGCTGATGAAGCAACAGAATTTGTGATCACATCCCTGAGTTTTGGGATTGCTACG 1382
Query 1423 ATAGTAGTGGCAGTGCCTGTAGGACTTTCTATAGCCGTTCGCTTGAACTTTGCTAAGACA 1482
|||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||
Sbjct 1383 ATAGTAGTGGCAGTGCCTTTTGGACTTTCTATAGCCGTTCGCTTGAACTTTGCAAAGACA 1442
Query 1483 ACGAAGAAAATGAGGAAAGACAAAGTTTTGATGTCGGTGGTTGATGTCTGGGCTGGAGGA 1542
||||||||||||| || |||||| |||||||||| ||||||||||||||||||||||||
Sbjct 1443 ACGAAGAAAATGATGACCGACAAACTTTTGATGTCTGTGGTTGATGTCTGGGCTGGAGGA 1502
Query 1543 ATAAGAATGCAAGATATGGACGATGTCTCACAGTTGCCCACGTTTCTTAAAGAACTAATC 1602
|| ||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||
Sbjct 1503 ATGAGAATGCAAGATATGGATAATGTTTCACAGTTGCCCCCGTTTCTTAAAGAACTAATC 1562
Query 1603 ATAGAAGGCATTGCCCAAAACACAAATGGCAGTGTTGTTTTTGAAACGGGAGTCACTGAA 1662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1563 ATAGAAGGCATTGCCCAAAACACAAATGGCAGTGTTGTTTTTGAAACGGGAGTCACTGAA 1622
Query 1663 CCAGAGGTTTATGGATCACCAACAGAACAAGCCATTCTTAACTTTGGGAATAAGTTGGGA 1722
|||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct 1623 CCAGAGCTTTATGGATCACCAACAGAACAAGCTATTCTTAGCTTTGGGAATAAGTTGGGA 1682
Query 1723 ATGAAATTTGATGATGCCAGGTCAGCATCATTAGTCCGTCATACTATACCATTCAACCCG 1782
|||||||| || |||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct 1683 ATGAAATTCAATCATGCTAGGTCAGCATCATTAGTCCGTCATACTATACCATTCAGCCC- 1741
Query 1783 AA-AAAGAAATATGGAGGCGTGGCACTACAGCTTGGTACACACGCTCACGTTCATTGGAA 1841
|| |||||||||||||||||||||||||||| ||||| ||||||| |||| |||||||||
Sbjct 1742 AACAAAGAAATATGGAGGCGTGGCACTACAGATTGGTGCACACGCCCACGCTCATTGGAA 1801
Query 1842 AGGATCTGCAAAAACTATTCTGAGTTCATGCGAAGGGTATATGGATGGGGCCAACAACTC 1901
|||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||| |
Sbjct 1802 AGGATCTGCAAAAACTATTCTGAGTTCATGTGAAAGGTATATGGATGGGGCCAATAACCC 1861
Query 1902 CAGAG-CTATTAATGAACAGAAACGAAAGTCTTTTGAAGGAACAATAGAAAATATGAGTA 1960
||||| | ||| |||| |||||||||||| ||||||||||||||| ||| | ||| | |
Sbjct 1862 CAGAGGC-ATTGATGATGAGAAACGAAAGTTTTTTGAAGGAACAATTGAAGAGATGTGCA 1920
Query 1961 AGGAGGGACTGCGTTGTGCAGCACTTGCTTATCAACCCTGTGAACTGGGAAGTCTTCCAA 2020
| | ||| |||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct 1921 ACAAAGGATTGCGTTGTGCAGCACTTGCTTATCAACCTTGTGAACTGGAAAGTCTTCCAA 1980
Query 2021 C--C-ATTACGGAACCTCGAAACCTTGTTTTGTTGGCTATTGTTGGTATAAAGGATCCTT 2077
| | |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1981 CAACCATTAAGGAACCTCGAAACCTTGTTTTGTTGGCTATTATTGGTATAAAGGATCCTT 2040
Query 2078 GCCGGCCAGGAACAAGGGATGCGATCCAACTGTGCAATTCCGGAAGTGTTAAGGTTTGCA 2137
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2041 GCCGGCCAGGCACAAGGGATGCGATCCAACTGTGCAATTCCGGAAGTGTTAAGGTTTGCA 2100
Query 2138 TGGTGACGGACAATGATGGTTTGACTGCACAGGCAATAGCAATTGAATGTGGGATACTAA 2197
|||||| |||| |||| | |||||||||||| ||||||||||||||||| |||||||| |
Sbjct 2101 TGGTGATGGACTATGACGTTTTGACTGCACAAGCAATAGCAATTGAATGCGGGATACTGA 2160
Query 2198 CGGATGCATCTGGCCGTAATATAAGGACAGGAGCCCAATTTCGTGAACTTTCCGATCTAG 2257
| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct 2161 CAGATGCATCTGGCCGTAATATAAGGACAGGAGCCCAATTTCGTGAACTAACCGATCCAC 2220
Query 2258 AAAGAGAGCAGATTGCCGGAGACATCTTAGTTTTTGCTCAATCTTCTCCCAACGACAACC 2317
||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2221 AAAGAGAGCAGATCGCCGGAGACATCTTAGTTTTTGCTCAATCTTCTCCCGACGACAACC 2280
Query 2318 TTCTGCTTGTCCAAGCACTGAAGAAAAGAGGCCATATAGTTGCAGCCACTGGAATGGGAA 2377
||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct 2281 TTCTGCTTGTCCAAGCACTGAAGAAAAGAGGGCATATAGTTGCAGCCACTGGGATGGGAA 2340
Query 2378 TACATGATCCAAAAACACTACGCGAGGCTGATGTTAGCCTTGCAATGGGAGTTGGAGGGA 2437
||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2341 TACATGATCCAAAGACACTACGCGAGGCTCATGTTAGCCTTGCAATGGGAGTTGGAGGGA 2400
Query 2438 CCGCAGCAGCAAAAGAGAATTCCGATTTCATTATACTAGATGATAATTTTGCTACGATTG 2497
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2401 CCGCAGCAGCAAAAGAGAATTCCGATATCATTATACTAGATGATAATTTTGCTACGATTG 2460
Query 2498 TCAAGTGTATCATATGGTCTCGATCTCTGTACAACAATGTCCAGAAATCTATCCTATTCC 2557
|||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||
Sbjct 2461 TCAAGTGTATCATATGGTCTCGATCTCTATACACCAATGTCCAGAGATCTATCCTATTCC 2520
Query 2558 GCCTCACTGTCAGTGTATCAGCATTGGCTGTCTGTGTGGTTGAGGTTGTAGTTTATGATG 2617
| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
Sbjct 2521 GGCTCACTGTCAGTGTATCAGCATTGGCTATCTGTGTGGTTGAGGTTGTAGTTTATGACG 2580
Query 2618 CATTTCCCCTTAACGCCGTGCAGTTT--CT-------G-T----T----G-G--TTAATC 2656
||||||| ||||||| |||||||||| || | | | | | ||||||
Sbjct 2581 CATTTCCACTTAACGTCGTGCAGTTTTGCTTTTCACTGATGCAGTTTCTGTGGCTTAATC 2640
Query 2657 TAATTATCGACATCTTAGGAGCATTAGCTTTGGCATACAGACCAAGATCTGATCACCACC 2716
| ||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||
Sbjct 2641 TTGTTATCGACATCTTAGGAGCATTAGCGTTGGCATACAGACCAAGTTCTGGTCACCACT 2700
Query 2717 TAATGGGAAAGCCACCGGTTGGTATAAGAGATCCTCTTATAACCAAGACGATGTGGTCCA 2776
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2701 TAATGGGAAAGCCACCGGTTGGTATAAGAGATCCTCTTATAACCAAGGCGATGTGGTCCA 2760
Query 2777 AGATGATAATTCAG 2790
|| ||||||| |||
Sbjct 2761 AGTTGATAATACAG 2774
Score = 459 bits (248), Expect = 8e-128
Identities = 352/399 (88%), Gaps = 19/399 (5%)
Strand=Plus/Plus
Query 2786 TTCAGGTATTTTACCTAGTGCTCTCGCTGGTACTCATAAATTCTGAGAAGCTACTGAAGC 2845
|||||||| ||||||||||||| |||||||||| || |||||||||||||||||||||||
Sbjct 2833 TTCAGGTAATTTACCTAGTGCTGTCGCTGGTACCCAAAAATTCTGAGAAGCTACTGAAGC 2892
Query 2846 TGAAGCATGGTCAGACGGGCAATGCCGAAAAAATGATGAACACA-TTGATATTCAATTCC 2904
||||||||||||| || |||||||| |||||| ||||||||||| ||| |||||||||||
Sbjct 2893 TGAAGCATGGTCATACCGGCAATGCGGAAAAAGTGATGAACACATTTG-TATTCAATTCC 2951
Query 2905 TTTGTCTTCTACCTGGTTTTTAATGAGTTTGAAATCCAAAGTGTAGACCAAACCTTCAAA 2964
|| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2952 TTAGTCTTCTGCCTGGTTTTTAATGAGTTTGAAATCCGAAGTGTAGACCAAACCTTCAAA 3011
Query 2965 GAAGTCCTTAGAGAGAATATGTTTCTCGTTACAATAACCTCAACTATCATATCTCAGATA 3024
|| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 3012 CAAATCCTTAGAGAGAATATGTTTCTCGTTACAATAACCTCAACTATCATCTCTCAGATA 3071
Query 3025 ATCGTGATCA-AGTTCGCAGGC-----A--TT-TTC-A------TTGACTTGAAAAAATG 3068
||||| || | |||| |||||| | || ||| | ||||||||||||||||
Sbjct 3072 ATCGTAAT-AGAGTTGGCAGGCTTTTTAAGTTCTTCCACCAGGCTTGACTTGAAAAAATG 3130
Query 3069 GGTGACGACAAGTCTTTTGGGGTTACTCAGCCAAGTCGCCACTCGCTACCCTTACCCAGC 3128
||||||||||||||||||||| || |||||||||||||||| ||||||||||||||| |
Sbjct 3131 GGTGACGACAAGTCTTTTGGGATTGCTCAGCCAAGTCGCCAATCGCTACCCTTACCCGGT 3190
Query 3129 CATCCAATATCATCGTAACTGAGATTTCTCTTGCCGTAT 3167
|| ||||||| | ||||||||| || | ||||||| |||
Sbjct 3191 CAACCAATATTACCGTAACTGAAATGTATCTTGCCATAT 3229
Score = 324 bits (175), Expect = 3e-87
Identities = 224/247 (91%), Gaps = 5/247 (2%)
Strand=Plus/Plus
Query 1018 GTTCAAAAAGATCTTCAAACAAATCCGTTTCTGTTATCTGGTTCAAAACTGATAGAAGGC 1077
|||||||||||||| |||| ||||||||| ||||||||||| |||||||||||||| |||
Sbjct 1026 GTTCAAAAAGATCTCCAAAGAAATCCGTTCCTGTTATCTGGCTCAAAACTGATAGATGGC 1085
Query 1078 ATAGGTACAATGCTGGTTACAAGTGTTGGAATGAACACTGAATGGGGGTTGAAGATGGAG 1137
|||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct 1086 ATAGGTACAATGCTGGTTACAAGTGTTGGAATGAACACTGCATGGGGGTTTAAGATGGAG 1145
Query 1138 GTTTCACA-GAAGACTGATGAAGAAAAGCCTTTTCAGGGGTACCTGAAATGGCTTGCGAT 1196
|| |||| || ||| || |||||||||||||||||||| ||||||||||||||||||||
Sbjct 1146 ATTCCACAAGA-GACAGACGAAGAAAAGCCTTTTCAGGGATACCTGAAATGGCTTGCGAT 1204
Query 1197 TTCTGCCAGCTGGTT-TGTCGTTTTGTTTGCTTCAGTTGCCTGTAGTATTCAAGTAGGCG 1255
|||||||||||||| | |||||||||| |||||||||||||||||| ||| | |||||
Sbjct 1205 TTCTGCCAGCTGGTCCT-TCGTTTTGTTCGCTTCAGTTGCCTGTAGTGTTCGATTAGGCC 1263
Query 1256 GAT-CTT 1261
||| |||
Sbjct 1264 GATACTT 1270
Score = 292 bits (158), Expect = 9e-78
Identities = 328/405 (81%), Gaps = 31/405 (8%)
Strand=Plus/Plus
Query 397 GAAGCTTCAACATCCGGAGGGTTTGGGATTGGAGTGGAAGAACTCGTTCAACTAGTCAAA 456
||| ||||||| || || || |||||||||||| |||| |||||||||||||||||||||
Sbjct 354 GAACCTTCAACTTCTGGCGGATTTGGGATTGGATTGGACGAACTCGTTCAACTAGTCAAA 413
Query 457 GAA---CGTAGCCTTGAAGCTTTGAATCGATATAATGGGG---------TT---CATGGG 501
|| |||||||||||||||||||||||||||||||||| || ||||||
Sbjct 414 GATGGTCGTAGCCTTGAAGCTTTGAATCGATATAATGGGGCAAGCACACTTGTTCATGGG 473
Query 502 TTATCAAATTTGTTGAAGACTGA-CTTGAAAGT-GGGCATAGATCGTCGCGATG-ATGAG 558
||| ||| | || | |||||||| || ||| | ||||||||||| | | | || |||||
Sbjct 474 TTAACAACTCTGCTCAAGACTGATCTA-AAA-TCGGGCATAGATCCTTGTG-TGGATGAG 530
Query 559 ATACTA-CTTCGCAGGAACGCATATGGGTCAAACACTTATCCTTGCAAAAAGGGAAAGAC 617
|||| | | |||||||||| | | |||||| || || || |||| || |||||||||||
Sbjct 531 ATAC-AGCATCGCAGGAACACTTTTGGGTCTAATACATACCCTTCCAGAAAGGGAAAGAG 589
Query 618 TTTCTGGTACTTTCTCTGGAGAGCTAGCCAGTTTTCTCATTTGCTGGTTATCATGTTTGC 677
||||||| |||||||||||||||| || || |||||||||| ||||||||| | ||||
Sbjct 590 ATTCTGGTGCTTTCTCTGGAGAGCTTGCAAGCTTTCTCATTTCCTGGTTATCTTCCTTGC 649
Query 678 TGCT-GTA-TTCTTTTCGCTGCTGCGAATTAAAACAAAGGGTATACTT-GATGGATGGTA 734
| | ||| |||||| | ||||||||| |||| ||||||||||| ||| |||||||||||
Sbjct 650 T-CAAGTAATTCTTT-CACTGCTGCGAGTTAACACAAAGGGTAT-CTTCGATGGATGGTA 706
Query 735 TATAGAAGCTTGCATCGTTTTGGTCACTGTT-TTTCACATCATTG 778
| |||||||||||||| |||||| || | || ||| |||||||||
Sbjct 707 TGTAGAAGCTTGCATCATTTTGGCCATTCTTCTTT-ACATCATTG 750
Score = 159 bits (86), Expect = 9e-38
Identities = 130/151 (86%), Gaps = 4/151 (3%)
Strand=Plus/Plus
Query 793 GAGTACAAGCAATCTTGTCGGTTTATAAA-GTTGACTGAGGAGAAGAGAACCGTATATCT 851
||||||||||| ||| ||| |||| ||| |||| |||||||||||| |||| | ||
Sbjct 879 GAGTACAAGCAGTCTCGTCAGTTT-GAAATCTTGAGAAAGGAGAAGAGAAACGTACACCT 937
Query 852 AGAGGTTATCAGAGGTGGCAGAAGAGTCAGGGTTTCT-ATATATGATATTGTTGTGGGCG 910
||||||||| ||| ||||||||||| || ||||||| || |||||||||||||||||||
Sbjct 938 AGAGGTTATTAGAAGTGGCAGAAGATTCTTGGTTTCTAAT-TATGATATTGTTGTGGGCG 996
Query 911 ATATTGTACCCCTCAAGAACGGTTGTCAGGT 941
||||||||||||||||||||||| |||||||
Sbjct 997 ATATTGTACCCCTCAAGAACGGTGGTCAGGT 1027
Score = 93.5 bits (50), Expect = 1e-17
Identities = 76/88 (86%), Gaps = 3/88 (3%)
Strand=Plus/Plus
Query 1 ATGGTTGTATTTAATTTGTCAATGTTCAGGTTTTGGAAGAGGCCATC-A--CCCAATGTA 57
||||| |||||| | |||||||||||||||||||||||||||||||| | ||||| | |
Sbjct 21 ATGGTAGTATTTGAGTTGTCAATGTTCAGGTTTTGGAAGAGGCCATCCAATCCCAAAGGA 80
Query 58 GGGCCGGGAGATCTTGAGATTGGTCTCG 85
|| ||||||||| | ||| |||||||||
Sbjct 81 GGTCCGGGAGATATAGAGGTTGGTCTCG 108
> Ahg949877 jgi|Araly1|949877|scaffold_801764.1
Length=2865
Score = 1402 bits (759), Expect = 0.0
Identities = 1452/1772 (82%), Gaps = 105/1772 (6%)
Strand=Plus/Plus
Query 1304 GATAC-TTTAGTGGTGTGACCAA-AAAATCAGATGGAACTCCAATGTTTAT-CTACGGAA 1360
||||| |||| |||| |||||| |||| |||||||| ||| |||||||| || |||||
Sbjct 964 GATACTTTTA-TGGTCAGACCAAGAAAA-AAGATGGAAATCCGATGTTTATCCT-CGGAA 1020
Query 1361 TTACCACTGCCGATGAAGCAATAGAATTTGTGATCACATCCCTGAGTTTTGGGATTGCGA 1420
||||||||||| ||||||||| |||||||||| ||| |||||||||||||||||| ||||
Sbjct 1021 TTACCACTGCCAATGAAGCAACAGAATTTGTGCTCAAATCCCTGAGTTTTGGGATCGCGA 1080
Query 1421 CAATAGTAGTGGCAGTGCCTGTAGGACTTTCTATAGCCGTTCGCTTGAACTTTGCTAA-G 1479
||||| |||||| |||| |||| ||||||||||||||||| | ||||||| |||| ||
Sbjct 1081 CAATAATAGTGGGAGTGGCTGTTGGACTTTCTATAGCCGTGCTCTTGAACCTTGC-AATT 1139
Query 1480 ACAACGAAG-AAAATGAGGAAAGACAAAGTTTTGATGTCGGTGGTTGATGTCTGGGCTGG 1538
||| || || |||||| || |||||| | |||||||||||||||||||||| |||||||
Sbjct 1140 ACAGCG-AGAAAAATGCTGACAGACAACGCTTTGATGTCGGTGGTTGATGTCCGGGCTGG 1198
Query 1539 AGGAATAAGAATGCAAGATATGGACGAT-GTCTCACAGTTGCCCACGTTTCTTAAAGAAC 1597
|| |||||||||||| |||||||| | | || |||||||||||||| || || || ||||
Sbjct 1199 AGAAATAAGAATGCAGGATATGGATGGTGGT-TCACAGTTGCCCACATTACTGAATGAAC 1257
Query 1598 TAATCATAGAAGGCATTGCCCAAAACACAAATGGCAGTGTTGTTTTTGAAACGGGAGTCA 1657
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1258 TAATCATAGAAGGCATTGCCCAAAACACAAATGGCAGTGTTGTTCTTGAAACGGGAGTC- 1316
Query 1658 CTGAACCAGAGGTTTATGGATCACCAACAGAACAAGCCATTCTTAACTT---TGGGAATA 1714
| | || | | | | ||||||||||| |||| ||| ||||||||
Sbjct 1317 -T---C-AG-GA---A-G-A---------GAACAAGCCATGCTTAGCTTCGCTGGGAATA 1356
Query 1715 AGTTGGGAATGAAATTTGATGATGCCAGGTCAGCATCATTAGTCCGTCATACTATACCAT 1774
||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||
Sbjct 1357 AGTTGGGAATGAAATTTGACGATGTTAGGTCGGCATCATTAGTCCGTCATACTATACCAT 1416
Query 1775 TCAACCC-GAAAAAGAAATATGGAGGCGTGGCACTACAGCTTGGTACAC-ACGCTCACGT 1832
||||||| || || ||||||||||||||||||| || ||||| |||||| | || ||| |
Sbjct 1417 TCAACCCAGACAA-GAAATATGGAGGCGTGGCATTAGAGCTTAGTACACGA-GCCCACCT 1474
Query 1833 TCATTGGAAAGGATCTGCAAAAACTATTCTGAGTTCATGCGAAGGGTATATGGATGGGGC 1892
||||||||||||||||||||| | |||||||| |||||||||| |||||| |||||| |
Sbjct 1475 TCATTGGAAAGGATCTGCAAATATTATTCTGAATTCATGCGAAAAGTATATAGATGGGTC 1534
Query 1893 CAACAACTCCAGAGCTATTAATGAACAGAAACGAAAGTCTTTTGAAGGAACAAT-AGAAA 1951
| ||||| ||| ||||||| ||||| |||||||||| |||||||| |||||| | |||
Sbjct 1535 CGACAACCCCATAGCTATTGATGAATTGAAACGAAAGGATTTTGAAGAAACAATTA-AAA 1593
Query 1952 ATATGAGTAAG-GAGGGACTGCGTTGTGCAGCACTTGCTTATCAACCCTGTGAACTGGGA 2010
| ||| ||| | |||| | |||||||||| ||||||||||||| ||||| |||||||| |
Sbjct 1594 ACATGTGTATGAGAGG-ATTGCGTTGTGCTGCACTTGCTTATCGACCCTATGAACTGGAA 1652
Query 2011 A-GTCTTCCAACCATT-ACG-G------A-AC---CT---C-----G-AAACCTTGTTTT 2048
| | |||||||||||| | | | | || || | | ||||||||||||
Sbjct 1653 AAG-CTTCCAACCATTGAGGAGCTTTCTACACTATCTAGTCTACCTGGAAACCTTGTTTT 1711
Query 2049 GTTGGCTATTGTTGGTATAAAGGATCCTTGCCGGCCA-GGAACAAGGGATGCGATCCAAC 2107
|||||||||| |||||||| ||||||||||||| ||| || |||| ||| || |||||||
Sbjct 1712 GTTGGCTATTATTGGTATAGAGGATCCTTGCCG-CCAAGGCACAAAGGAAGCAATCCAAC 1770
Query 2108 TGTGCAATTCCGGA-AGTGTTAAGGTTTGCATGGTGACGGACAATGATGGTTTGACTGCA 2166
||||||| ||| | | |||||||||||||||||||||||| |||| | ||||||||||
Sbjct 1771 TGTGCAAATCCATAGA-TGTTAAGGTTTGCATGGTGACGGATGATGACGTTTTGACTGCA 1829
Query 2167 -CAGGCAATAGCAATTGAATGTGGGATACTA-ACGGATGCATCTGGCCGTAATATAAGGA 2224
||| | ||||||| |||||||| ||| | | | | ||||||| | ||||||| | ||
Sbjct 1830 ACAG-CTATAGCAAAGGAATGTGGCATATTTGATG-AGGCATCTGACGGTAATATCACGA 1887
Query 2225 CAGGAGCCCAATTTCGTGAA-CTTTCC-GATCTAGAAAGAGA-GCAGATTGCCGGAGACA 2281
||||||| |||||||| || |||||| | |||||||||| | |||| |||| | ||
Sbjct 1888 CAGGAGCTGAATTTCGT-AATCTTTCCAG-TCTAGAAAGA-ACGCAGCGCGCCGAATACC 1944
Query 2282 TCTTAGTTTTTGCTCAATCTTCTCCCA-ACGACAACCTTCTGCTTGTCCAAGCACTGAAG 2340
|||||||| |||||||||||||||||| | |||||||||||| ||||| |||||||||||
Sbjct 1945 TCTTAGTTCTTGCTCAATCTTCTCCCAGA-GACAACCTTCTGTTTGTCAAAGCACTGAAG 2003
Query 2341 AAAAGAGGCCATATAGTTGCAGCCACTGGAATGGGAATACATGATCCAAAAACACTAC-G 2399
||||||| || |||||||||||||||| ||||||||||||||| || | |||||| |
Sbjct 2004 GAAAGAGGACACGTAGTTGCAGCCACTGGGATGGGAATACATGATTCAGAGACACTAATG 2063
Query 2400 CGAGGCTGATGTTAGCCTTGCAATGGGAGTTGGAGGGACCGCAGCAGCAAAAGAGAATTC 2459
| ||| ||||| ||||||||||||||| || |||| ||||||||||||||||| || ||
Sbjct 2064 -GCGGCGGATGTAAGCCTTGCAATGGGAATTCGAGGAACCGCAGCAGCAAAAGAAAAGTC 2122
Query 2460 CGAT-TTCATTATACTAGATGATAATTTTGCTACGATTGTCAAGTGT-AT-CATATGGTC 2516
||| || ||| || | ||||| || ||||||||||| ||| || || || | |||||
Sbjct 2123 AGATATT-ATTGTATTGGATGACAAATTTGCTACGATCGTCGAG-GTTATACG-ATGGTG 2179
Query 2517 TCGATCTCTGTACAACAA-TGTCCAGAAATC-TATCCTATTCCGCCTCACTGTCAGTGTA 2574
||||| ||| |||| ||| | ||||||| | | ||||||| || |||||||||||||||
Sbjct 2180 TCGATATCTATACA-CAAATATCCAGAAG-CATGTCCTATTTCGGCTCACTGTCAGTGTA 2237
Query 2575 TCAG-CATTGGCTGTCTGTGTGGTTGAGGTTGTAGTTTATGATGCATTTCCCCTTAACGC 2633
|||| | ||| || ||||||| |||||||||||| |||||||||||||||| || || |
Sbjct 2238 TCAGTCGTTG-CTATCTGTGTTGTTGAGGTTGTATTTTATGATGCATTTCCACTCAATAC 2296
Query 2634 CGTGCAGTTTCTGTTGGTTAATCTAATTATCGACATCTTAGGAGCATTAGCTTTGGCATA 2693
||| ||| |||||||| ||||||| || ||||||||||| ||||||||| | |||| |||
Sbjct 2297 CGTTCAGCTTCTGTTGCTTAATCTTATCATCGACATCTTTGGAGCATTATCGTTGGTATA 2356
Query 2694 CAGACCAAGATCTGATCACCACCTAATGGGAAAGCCACCGGTTGGTATAAGAGATCCTCT 2753
||||||| | | | |||| ||||||| ||| |||||||||||||||||||| |||||
Sbjct 2357 CAGACCACCAGCA-A--ACCATCTAATGGCAAAACCACCGGTTGGTATAAGAGACCCTCT 2413
Query 2754 TATAACCAAGACGATGTGGTCCAAGATGATAATTCAGGT-ATTTTACCTAGTGCTCTCGC 2812
||||| |||||||||||||||||| || | | ||||| |||| || || |||| | |
Sbjct 2414 TATAAATAAGACGATGTGGTCCAAGTTGGTGCTACAGGTGATTT-ACGTATTGCTGTTTC 2472
Query 2813 TGGTACTCATAAATTCTGAGAAGCTACTGAAGCTGAAGCATGGTCAGA---CGGGCAATG 2869
||| ||||||||||||||||| |||||||||||| ||||||||| | | | ||||
Sbjct 2473 TGGCGGTCATAAATTCTGAGAAGATACTGAAGCTGATGCATGGTCATAATACCAGTAATG 2532
Query 2870 CCGAAAAAATGATGAACACATTGATATTCAATTCCTTTGTCTTCTACCTGGTTTTTAATG 2929
|||||||| ||| ||||||||| |||||||||| |||| | |||| ||||| |||| ||
Sbjct 2533 CCGAAAAAGTGAAGAACACATTTATATTCAATTGCTTTATTTTCTGCCTGGCTTTTGGTG 2592
Query 2930 AGTTTGAAATCCAAAGTGTAGACCAAACCTTCAAAGAAGTCCTTAGAGAGAATATGTTTC 2989
|||| ||||| |||| |||||| |||||| |||||| |||||||||| |||||||||
Sbjct 2593 AGTTCGAAATTGGAAGTCTAGACCGAACCTTGAAAGAAATCCTTAGAGATAATATGTTTG 2652
Query 2990 TCGTTACAATAACCTCAACTATCATATCTCAG 3021
| |||||||| |||| ||||| ||| ||||
Sbjct 2653 TTATTACAATAGCCTCGACTATTGTATTTCAG 2684
Score = 231 bits (125), Expect = 2e-59
Identities = 196/231 (85%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 1018 GTTCAAAAAGATCTTCAAACAAATCCGTTTCTGTTATCTGGTTCAAAACTGATAGAAGGC 1077
||||||||||||||||||| |||| || || ||||||||||| || ||||||||||||
Sbjct 726 GTTCAAAAAGATCTTCAAATGGATCCATTCCTATTATCTGGTTCGAAGCTGATAGAAGGC 785
Query 1078 ATAGGTACAATGCTGGTTACAAGTGTTGGAATGAACACTGAATGGGGGTTGAAGATGGAG 1137
||||||||||||||||||||||||||||||| ||| || |||||||| || |||||||
Sbjct 786 ATAGGTACAATGCTGGTTACAAGTGTTGGAAAGAATACCCAATGGGGGAAGATGATGGAG 845
Query 1138 GTTTCACA-GAAGACTGATGAAGAAAAGCCTTTTCAGGGGTACCTGAAATGGCTTGCGAT 1196
| |||| || |||||||||||||| ||| ||||||| ||| |||||||| || | |
Sbjct 846 ACTGCACATGA-GACTGATGAAGAAATGCCCTTTCAGGTATACTTGAAATGGATTACAAA 904
Query 1197 TTCTGCCAGCTGGTTTGTCGTTTTGTTTGCTTCAGTTGCCTGTAGTATTCA 1247
|||||||||||| || | |||||||||||||| ||||||||||| | ||||
Sbjct 905 TTCTGCCAGCTGCTTAGCCGTTTTGTTTGCTTTAGTTGCCTGTATTGTTCA 955
Score = 104 bits (56), Expect = 4e-21
Identities = 73/81 (90%), Gaps = 2/81 (2%)
Strand=Plus/Plus
Query 862 AGAGGTGGCA-GAAGAGTCAGGGTTTCTATATATGATATTGTTGTGGGCGATATTGTACC 920
|||||||| | |||| ||| |||||||| | |||||||||||||||||||||||||||||
Sbjct 648 AGAGGTGG-AGGAAGCGTCTGGGTTTCTGTTTATGATATTGTTGTGGGCGATATTGTACC 706
Query 921 CCTCAAGAACGGTTGTCAGGT 941
||||||||| ||| |||||||
Sbjct 707 CCTCAAGAATGGTGGTCAGGT 727
> Ahg949876 jgi|Araly1|949876|scaffold_801763.1
Length=2560
Score = 867 bits (469), Expect = 0.0
Identities = 852/1026 (83%), Gaps = 70/1026 (7%)
Strand=Plus/Plus
Query 1512 GATGTCGGTGGTTGATGTCTGGGCTGGAGGAATAAGAATGCAAGATATGGACGAT-GTCT 1570
||||||||||||||||||||||||||||| ||||||||||||||||||||| || || |
Sbjct 854 GATGTCGGTGGTTGATGTCTGGGCTGGAGAAATAAGAATGCAAGATATGGATAATGGT-T 912
Query 1571 CACAGTTGCCCACGTTTCTTAAAGAACTAATCATAGAAGGCATTGCCCAAAACACAAATG 1630
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 913 CACAGTTGCCCACCTTACTTAAAGAACTAATCATAGAAGGCATTGCCCAAAACACAAATG 972
Query 1631 GCAGTGTTGTTTTTGAAACGGGAGTCACTGAACCAGAGGTTTATGGATCACCAACAGAAC 1690
||||||||||| ||||||| | | || | | | |||||||||||||
Sbjct 973 GCAGTGTTGTTCTTGAAAC----G-----G-----GA-G--T-T---TCACCAACAGAAC 1011
Query 1691 AAGCCATTCTTAACTTTGGGAATAAGTTGGGAATGAAATTTGATGATGCCAGGTCAGCAT 1750
|||||||||||| |||||||||||||||||||||||||||||| |||| ||||| ||||
Sbjct 1012 AAGCCATTCTTAGCTTTGGGAATAAGTTGGGAATGAAATTTGACGATGTTAGGTCGGCAT 1071
Query 1751 CATTAGTCCGTCATACTATACCATTCAACCC-GAAAAAGAAATATGGAGGCGTGGCACTA 1809
|||||| |||||||||||||||||||||||| || || |||||||||||| |||||| ||
Sbjct 1072 CATTAGGCCGTCATACTATACCATTCAACCCAGACAA-GAAATATGGAGGTGTGGCATTA 1130
Query 1810 CAGCTTGGTACAC-ACGCTCACGTTCATTGGAAAGGATCTGCAAAAACTATTCTGAGTTC 1868
||||| |||||| | || | |||||||||||||||||||||||| | |||||||| |||
Sbjct 1131 AAGCTTAGTACACGA-GCCCTCGTTCATTGGAAAGGATCTGCAAAGATTATTCTGAATTC 1189
Query 1869 ATGCGAAGGGTATATGGATGGGGCCAACAACTCCAGAGCTATTAATGAACAGAAACGAAA 1928
||||||| ||||||||||||| || ||||||||||||||||| ||||||||||||||||
Sbjct 1190 ATGCGAAAAGTATATGGATGGGTCCGACAACTCCAGAGCTATTGATGAACAGAAACGAAA 1249
Query 1929 GTCTTTTGAAGGAACAATAGAAA-ATATGAGTAAG-GAGGGACTGCGTTGTGCAGCACTT 1986
| |||||||| |||||| ||| | ||| || || |||| | |||||||||| ||||||
Sbjct 1250 GGGTTTTGAAGAAACAATT-AAATACATGTGTGAGAGAGG-ATTGCGTTGTGCTGCACTT 1307
Query 1987 GCTTATCAACCCTGTGAACTGGGAAGTCTTCCAACCATT-ACG---------GA--ACCT 2034
||||||||||||| |||||||| || |||||| ||| | | | || ||||
Sbjct 1308 GCTTATCAACCCTATGAACTGGAAAAACTTCCATCCAATGAGGCACTTTCTCGACTACCT 1367
Query 2035 ---C-----G-AAACCTTGTTTTGTTGGCTATTGTTGGTATAAAGGATCCTTGCCGGCCA 2085
| | ||| |||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 1368 AGTCTACCTGGAAAACTTGTTTTGTTGGCTATTATTGGTATAGAGGATCCTTGCCGGCCA 1427
Query 2086 GGAACAAGGGATGCGATCCAACTGTGC-AATTCCGGAAGTGTTAAGGTTTGCATGGTGAC 2144
|| |||| ||| | ||||||||||||| ||| ||||| ||||||||||| ||||||||||
Sbjct 1428 GGCACAAAGGAAGAGATCCAACTGTGCCAAT-CCGGAGGTGTTAAGGTTCGCATGGTGAC 1486
Query 2145 GGACAATGATGGTTTGACTGCA-CAGGCAATAGCAATTGAA-TGTGGGATACTA-ACGGA 2201
|||| |||| |||||||||| ||| | ||||||| ||| ||||||||| | ||| |
Sbjct 1487 GGACGATGACATTTTGACTGCAACAG-CTATAGCAAA-GAAATGTGGGATATTTGACG-A 1543
Query 2202 TGCATCTGGCCGTAATATAAGGACAGGAGCCCAATTTCGTGAA-CTTTCCGATCTAGAAA 2260
||||||| | |||||||| ||||||||| |||||||| || ||||||||||||||||
Sbjct 1544 GGCATCTGACGGTAATATATTGACAGGAGCTGAATTTCGT-AATCTTTCCGATCTAGAAA 1602
Query 2261 GAGAGCAGATTGCCGGAGA-CATCTTAGTTTTTGCTCAATCTTCTCCCAACGACAACCTT 2319
||||| || | || ||| | |||||||| ||||| |||||||||||| ||| ||||||
Sbjct 1603 GAGAGGAGCGCGTCGAAGATC-TCTTAGTTCTTGCTGAATCTTCTCCCAGCGAAAACCTT 1661
Query 2320 CTGCTTGTCCAAGCACTGAAGAAAAGAGGCCATATAGTTGCAGCCACTGGAATGGGAATA 2379
||| ||||| ||||||||||||||||| ||| | |||||||||||||| |||||||||
Sbjct 1662 CTGTTTGTCAAAGCACTGAAGAAAAGACAACATGTCGTTGCAGCCACTGGGATGGGAATA 1721
Query 2380 CATGATCCAAAAACACTAC-GCGAGGCTGATGTTAG-CCTTGCAATGGGAGTTGGAGGGA 2437
|||||| || | |||||| | | ||| ||||| || ||||||||||||| ||||||| |
Sbjct 1722 CATGATTCAGAGACACTAATG-GCGGCGGATGT-AGGCCTTGCAATGGGAATTGGAGGAA 1779
Query 2438 CCGCAGCAGCAAAAGAGAATTCCGATTTCATTATACTAGATGAT-AATTTTGCTACGATT 2496
| ||||| ||||||||||| |||||| |||| ||| | |||| ||||| ||||||||
Sbjct 1780 CTGCAGCGGCAAAAGAGAAGTCCGATATCATAATATTGGATGGCGAATTT-GCTACGATC 1838
Query 2497 GTCAAG 2502
|||||
Sbjct 1839 ATCAAG 1844
Score = 252 bits (136), Expect = 2e-65
Identities = 211/247 (85%), Gaps = 5/247 (2%)
Strand=Plus/Plus
Query 1018 GTTCAAAAAGATCTTCAAACAAATCCGTTTCTGTTATCTGGTTCAAAACTGATAGAAGGC 1077
||||||||||||||||||| |||| || || ||||||||||||||||||||||| |||
Sbjct 360 GTTCAAAAAGATCTTCAAATTGATCCATTCCTATTATCTGGTTCAAAACTGATAGAGGGC 419
Query 1078 ATAGGTACAATGCTGGTTACAAGTGTTGGAATGAACACTGAATGGGGGTTGAAGATGGAG 1137
|| |||||||||||||||||||||||||||||||| |||||||||||| || |||||||
Sbjct 420 ATTGGTACAATGCTGGTTACAAGTGTTGGAATGAATACTGAATGGGGGCAGATGATGGAG 479
Query 1138 GTTTCACA-GAAGACTGATGAAGAAAAGCCTTTTCAGGGGTACCTGAAATGGCTTGCGAT 1196
|| |||| || |||||||| ||||| || ||||||| ||| |||||||| |||| |
Sbjct 480 ATTGCACATGAT-ACTGATGAGGAAAAACCCTTTCAGGTATACTTGAAATGGATTGCAAA 538
Query 1197 TTCTGCCAGCTGGTTTGTCGTTTTGTTTGCTTCAGTTGCCTGTAGTA-TTCAAGTAGGCG 1255
|||||||||||| || |||||||||||||||| ||||||||||| | ||||| || ||
Sbjct 539 TTCTGCCAGCTGCTTAGTCGTTTTGTTTGCTTTAGTTGCCTGTA-TCGTTCAATTATGCC 597
Query 1256 GAT-CTT 1261
||| |||
Sbjct 598 GATACTT 604
Score = 99.0 bits (53), Expect = 2e-19
Identities = 72/81 (89%), Gaps = 2/81 (2%)
Strand=Plus/Plus
Query 862 AGAGGTGGCA-GAAGAGTCAGGGTTTCTATATATGATATTGTTGTGGGCGATATTGTACC 920
|||||||| | |||| ||| |||||||||| |||||||||||||||||||||||||||||
Sbjct 282 AGAGGTGG-AGGAAGCGTCTGGGTTTCTATTTATGATATTGTTGTGGGCGATATTGTACC 340
Query 921 CCTCAAGAACGGTTGTCAGGT 941
||| | ||| ||| |||||||
Sbjct 341 CCTGAGGAATGGTGGTCAGGT 361
> Ahg900413 jgi|Araly1|900413|Al_scaffold_0004_1063
Length=1572
Score = 676 bits (366), Expect = 0.0
Identities = 421/448 (94%), Gaps = 2/448 (0%)
Strand=Plus/Plus
Query 2287 GTTTTTGCTCAATCTTCTCCCAACGACAACCTTCTGCTTGTCCAAGCACTGAAGAAAAGA 2346
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 649 GTTTTTGCTCAATCTTCTCCCAGCGACAACCTTCTGCTTGTCCAAGCACTGAAGAAAAGA 708
Query 2347 GGCCATATAGTTGCAGCCACTGGAATGGGAATACATGATCCAAAAACACTACGCGAGGCT 2406
|| ||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct 709 GGGCATATCGTTGCAGCCACTGGGATGGGAATACATGATCCAAATACACTACGCGAGGCT 768
Query 2407 GATGTTAGCCTTGCAATGGGAGTTGGAGGGACCGCAGCAGCAAAAGAGAATTCCGATTTC 2466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 769 GATGTTAGCCTTGCAATGGGAGTTGGAGGGACCGCAGCAGCAAAAGAGAATTCCGATATC 828
Query 2467 ATTATACTAGATGATAATTTTGCTACGATTGTCAAGTGTATCATATGGTCTCGATCTCTG 2526
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 829 ATTATACTAGATGATAATTTTGCTACGATTGTCAAGTGTATCATATGGTCTCGATCTCTA 888
Query 2527 TACAACAATGTCCAGAAATCTATCCTATTCCGCCTCACTGTCAGTGTATCAGCATTGGCT 2586
|||| |||||| |||| ||||||||||||||| || ||||||||||||||||||||||||
Sbjct 889 TACACCAATGTACAGAGATCTATCCTATTCCGGCTGACTGTCAGTGTATCAGCATTGGCT 948
Query 2587 GTCTGTGTGGTTGAGGTTGTAGTTTATGATGCATTTCCCCTTAACGCCGTGCAGTT-TCT 2645
|||||||||||||||||||| | |||||||| ||||| ||||||||||||||| | | |
Sbjct 949 ATCTGTGTGGTTGAGGTTGTAATATATGATGCCTTTCCACTTAACGCCGTGCAGCTAT-T 1007
Query 2646 GTTGGTTAATCTAATTATCGACATCTTAGGAGCATTAGCTTTGGCATACAGACCAAGATC 2705
||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 1008 ATTGCTTAATCTTATTATCGACATCTTAGGAGCATTAGCGCTGGCATACAGACCAAGAGC 1067
Query 2706 TGATCACCACCTAATGGGAAAGCCACCG 2733
|||| |||||||||||||||||||||||
Sbjct 1068 TGATGACCACCTAATGGGAAAGCCACCG 1095
Score = 523 bits (283), Expect = 3e-147
Identities = 372/412 (90%), Gaps = 18/412 (4%)
Strand=Plus/Plus
Query 2743 AGAGATCCTCTTATAACCAAGACGATGTGGTCCAAGATGATAATTCAGGTATTTTACCTA 2802
||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1154 AGAGACCCTCTTATAA-CAAGACGATGTGGTCCAAGTTGATAATTCAGGTATTTTACCTT 1212
Query 2803 GTGCTCTCGCTGGTACTCATAAATTCTGAGAAGCTACTGAAGCTGAAGCATGGTCAGACG 2862
||| | ||||||||| ||| |||||||||||||||||||||||||||||||||||| |||
Sbjct 1213 GTGTTGTCGCTGGTAATCAAAAATTCTGAGAAGCTACTGAAGCTGAAGCATGGTCATACG 1272
Query 2863 GGCAATGCCGAAAAAATGATGAACACATTGATATTCAATTCCTTTGTCTTCTACCTGGTT 2922
||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||
Sbjct 1273 GGCAATGCCGAAAAAGTGATGAACACATTCATATTCAATTCCTTTGTCTTCTCCCTGGTT 1332
Query 2923 TTTAATGAGTTTGAAATCCAAAGTGTAGACCAAACCTTCAAAGAAGTCCTTAGAGAGAAT 2982
| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1333 TGTAATGAGTTTGAAATCCAAAGTGTAGACCAAACCTTCAAAGAAATCCTTAGAGAGAAT 1392
Query 2983 ATGTTTCTCGTTACAATAACCTCAACTATCATATCTCAGATAATCGTGATCAAGTTCGC- 3041
||||||||||| |||||||||||||||||||||||||| |||||||||||| |||| ||
Sbjct 1393 ATGTTTCTCGTCACAATAACCTCAACTATCATATCTCAAATAATCGTGATCGAGTTTGCC 1452
Query 3042 AGGCATTTTCATT------G--A--CT----T-GAAAAAATGGGTGACGACAAGTCTTTT 3086
|| |||||||||| | | || | |||||||||||||||||||||||||||
Sbjct 1453 AG-CATTTTCATTTCTTCCGTCAGGCTAGACTTGAAAAAATGGGTGACGACAAGTCTTTT 1511
Query 3087 GGGGTTACTCAGCCAAGTCGCCACTCGCTACCCTTACCCAGCCATCCAATAT 3138
||| || |||||||||||||||||||||| |||||||||| ||| |||||||
Sbjct 1512 GGGATTGCTCAGCCAAGTCGCCACTCGCTTCCCTTACCCAACCAACCAATAT 1563
Score = 340 bits (184), Expect = 3e-92
Identities = 203/211 (96%), Gaps = 5/211 (2%)
Strand=Plus/Plus
Query 1513 ATGTCGGTGGTTGATGTCTGGGCTGGAGGAATAAGAATGCAAGATATGGACGA-TGTCTC 1571
|||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||
Sbjct 1 ATGTCGGTGGTTGATGTCTGGGCTGGAGGAATAAGAATGCAAGATATGGA-TACTGTTTC 59
Query 1572 ACAGTTGCCCACGT-TTCTTAAAGAACTAATCATAGAAGGCATTGCCCAAAACACAAATG 1630
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 60 ACAGTTGCCCAC-TCTTCTTAAAGAACTAATCATAGAAGGCATTGCCCAAAACACAAATG 118
Query 1631 GCAGTGTTGTTTTTGAAACGGGAGTCACTGAACCAGAGGTTTATGGATCACCAACAGAAC 1690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 119 GCAGTGTTGTTTTTGAAACGGGAGTCACTGAACCAGAGGTTTATGGATCACCAACAGAAC 178
Query 1691 AAGCCATTCTTAACTTTGGGAATAAG-TTGG 1720
|||||||||||||||| ||||||||| ||||
Sbjct 179 AAGCCATTCTTAACTTGGGGAATAAGCTTGG 209
Score = 209 bits (113), Expect = 9e-53
Identities = 117/119 (98%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 1811 AGCTTGGTACACACGCTCACGTTCATTGGAAAGGATCTGCAAAAACTATTCTGAGTTCAT 1870
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 203 AGCTTGGTACACACGCTCATGTTCATTGGAAAGGATCTGCAAAAACTATTCTGAGTTCAT 262
Query 1871 GCGAAGGGTATATGGATGGGGCCAACAACTCCAGAGCTATTAATGAACAGAAACGAAAG 1929
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 263 GCGAAGGGTATATGGATGGGGCCAACAACTCCAGAGCTATTGATGAACAGAAACGAAAG 321
Score = 202 bits (109), Expect = 2e-50
Identities = 144/160 (90%), Gaps = 5/160 (3%)
Strand=Plus/Plus
Query 2128 AAGGTTTGCATGGTGACGGAC-AATGATGGTTTGACTGCACAGGCAATAGCAATTGAATG 2186
||||||||||||||||||| | |||| | |||||| ||||| |||||||||||| ||||
Sbjct 427 AAGGTTTGCATGGTGACGG-CGGATGACGTTTTGACGGCACAAGCAATAGCAATTAAATG 485
Query 2187 TGGGATACTAACGGATGCATCTGGCCGTAATATAAGGACAGGAGCCCAATTTCGTGAACT 2246
||||||||| ||| ||||| | ||||||||||| |||||||||||||||||||||||||
Sbjct 486 TGGGATACTGACGAATGCA--T-GCCGTAATATATGGACAGGAGCCCAATTTCGTGAACT 542
Query 2247 TTCCGATCTAGAAAGAGAGCAGATTGCCGGAGACATCTTA 2286
|||||||||||||| ||||||||| |||||||||||||||
Sbjct 543 TTCCGATCTAGAAAAAGAGCAGATCGCCGGAGACATCTTA 582
Score = 174 bits (94), Expect = 3e-42
Identities = 106/112 (95%), Gaps = 0/112 (0%)
Strand=Plus/Plus
Query 1960 AAGGAGGGACTGCGTTGTGCAGCACTTGCTTATCAACCCTGTGAACTGGGAAGTCTTCCA 2019
||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct 319 AAGGAAGGACTGCGTTGTGCAGCACTTGCTTATCAACCCTGTGAACTGGGAAGAATTTCA 378
Query 2020 ACCATTACGGAACCTCGAAACCTTGTTTTGTTGGCTATTGTTGGTATAAAGG 2071
||||||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 379 ACCATTAAGGAACCTCGAAACCTTGTTTTGTTGGCTATTATTGGTATAAAGG 430
> Ahg933115 jgi|Araly1|933115|scaffold_401103.1
Length=842
Score = 292 bits (158), Expect = 9e-78
Identities = 233/266 (88%), Gaps = 18/266 (7%)
Strand=Plus/Plus
Query 2919 GGTTTTTAATGAGTTTGAAATCCAAAGTGTAGACCAAACCTTCAAAGAAGTCCTTAGAGA 2978
||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 578 GGTTTGTAATGAGTTTGAAATCCAAAGTGTAGACCAAACCTTCAAAGAAATCCTTAGAGA 637
Query 2979 GAATATGTTTCTCGTTACAATAACCTCAACTATCATATCTCAGATAATCGTGATCAAGTT 3038
||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||
Sbjct 638 GAATATGTTTCTCGTCACAATAACCTCAACTATCATATCTCAAATAATCGTGATCGAGTT 697
Query 3039 CGC-AGGCATTTTCATT------G--A--CT----T-GAAAAAATGGGTGACGACAAGTC 3082
|| || |||||||||| | | || | |||||||||||||||||||||||
Sbjct 698 TGCCAG-CATTTTCATTTCTTCCGTCAGGCTAGACTTGAAAAAATGGGTGACGACAAGTC 756
Query 3083 TTTTGGGGTTACTCAGCCAAGTCGCCACTCGCTACCCTTACCCAGCCATCCAATATCATC 3142
||||||| || |||||||||||||||||||||| |||||||||| ||| ||||||| | |
Sbjct 757 TTTTGGGATTGCTCAGCCAAGTCGCCACTCGCTTCCCTTACCCAACCAACCAATATTACC 816
Query 3143 -GTAACTGAGATTTCTCTTGCCGTAT 3167
||||||||||||| ||||||| |||
Sbjct 817 CGTAACTGAGATTTGTCTTGCCATAT 842
> Ahg933109 jgi|Araly1|933109|scaffold_401097.1
Length=834
Score = 281 bits (152), Expect = 2e-74
Identities = 231/266 (87%), Gaps = 18/266 (7%)
Strand=Plus/Plus
Query 2919 GGTTTTTAATGAGTTTGAAATCCAAAGTGTAGACCAAACCTTCAAAGAAGTCCTTAGAGA 2978
||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 570 GGTTTGTAATGAGTTTGAAATCCAAAGTGTAGACCAAACCTTCAAAGAAATCCTTAGAGA 629
Query 2979 GAATATGTTTCTCGTTACAATAACCTCAACTATCATATCTCAGATAATCGTGATCAAGTT 3038
||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||
Sbjct 630 GAATATGTTTCTCGTCACAATAACCTCAACTATCATATCTCAAATAATCGTGATCGAGTT 689
Query 3039 CGC-AGGCATTTTCATT------G--A--CT----T-GAAAAAATGGGTGACGACAAGTC 3082
|| || |||||||||| | | || | ||||||||||||||||||||| |
Sbjct 690 TGCCAG-CATTTTCATTTCTTCTGTCAGGCTAGACTTGAAAAAATGGGTGACGACAAGAC 748
Query 3083 TTTTGGGGTTACTCAGCCAAGTCGCCACTCGCTACCCTTACCCAGCCATCCAATATCATC 3142
||||||| || |||||||||||||||||||||| |||||||||| ||| ||||| | | |
Sbjct 749 TTTTGGGATTGCTCAGCCAAGTCGCCACTCGCTTCCCTTACCCAACCAACCAATTTTACC 808
Query 3143 -GTAACTGAGATTTCTCTTGCCGTAT 3167
||||||||||||| ||||||| |||
Sbjct 809 CGTAACTGAGATTTGTCTTGCCATAT 834
> Ahg949868 jgi|Araly1|949868|scaffold_801755.1
Length=1636
Score = 241 bits (130), Expect = 3e-62
Identities = 155/167 (93%), Gaps = 2/167 (1%)
Strand=Plus/Plus
Query 1304 GATACTTTAGTGG-TGTGACCAAAAAATCAGATGGAACTCCAATGTTTATCTACGGAATT 1362
||||||||||||| || ||||||||||||||||||||||||||||||||| || |||||
Sbjct 961 GATACTTTAGTGGTTG-GACCAAAAAATCAGATGGAACTCCAATGTTTATTTATGGAATC 1019
Query 1363 ACCACTGCCGATGAAGCAATAGAATTTGTGATCACATCCCTGAGTTTTGGGATTGCGACA 1422
|| ||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||
Sbjct 1020 ACTACTGCTGATGAAGCAACAGAATTTGTGATCACATCCCTGAGTTTTGGGATTGCTACA 1079
Query 1423 ATAGTAGTGGCAGTGCCTGTAGGACTTTCTATAGCCGTTCGCTTGAA 1469
||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct 1080 GTAGTAGTGGCAGTGCCTTTTGGACTTTCTATAGCCGTTCGCTTGAA 1126
> Ahg900409 jgi|Araly1|900409|Al_scaffold_0004_1059
Length=771
Score = 71.3 bits (38), Expect = 5e-11
Identities = 42/44 (95%), Gaps = 0/44 (0%)
Strand=Plus/Plus
Query 3055 GACTTGAAAAAATGGGTGACGACAAGTCTTTTGGGGTTACTCAG 3098
||||||||||||||||||||||||||||||||||| || |||||
Sbjct 692 GACTTGAAAAAATGGGTGACGACAAGTCTTTTGGGATTGCTCAG 735
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 130575532963
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5