BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G53510.1
Length=2226
Score E
Sequences producing significant alignments: (Bits) Value
Ahg331706 jgi|Araly1|331706|fgenesh1_pm.C_scaffold_8001049 3657 0.0
Ahg492011 jgi|Araly1|492011|fgenesh2_kg.7__1444__AT4G27730.1 1483 0.0
Ahg916994 jgi|Araly1|916994|Al_scaffold_0008_1745 553 2e-156
> Ahg331706 jgi|Araly1|331706|fgenesh1_pm.C_scaffold_8001049
Length=2226
Score = 3657 bits (1980), Expect = 0.0
Identities = 2146/2228 (96%), Gaps = 4/2228 (0%)
Strand=Plus/Plus
Query 1 ATGGACGAGATTGTAGAAGACTCGAGCAGAGTCATGGAGATAGAAGGACAGAATGATGAT 60
|||| |||||||||||||||||||||||||||||||||||||| |||| || |||||||
Sbjct 1 ATGGCCGAGATTGTAGAAGACTCGAGCAGAGTCATGGAGATAGGAGGAGAGGTTGATGAT 60
Query 61 CTGGACCGGTGCGTGGTGGAGGAGGTTGAGCTAACCGTTCCAAAAACCGATGATCCAACG 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 CTAGACCGGTGCGTGGTGGAGGAGGTTGAGCTAACCGTTCCAAAAACCGATGATCCAACG 120
Query 121 TTACCGGTTCTCACATTTCGAATGTGGACTTTAGGTCTTGGTGCGTGTATCATACTCTCG 180
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 121 TTACCGGTTCTCACTTTTAGAATGTGGACTTTAGGTCTTGGTGCGTGTATCATACTCTCG 180
Query 181 TTCATAAACCAGTTTTTCTGGTACAGACAGATGCCGTTAACCATTAGCGGAATCTCGGCT 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 TTCATAAACCAGTTTTTCTGGTACAGACAGATGCCGTTAACCATTAGCGGAATCTCGGCT 240
Query 241 CAGATTGCGGTCGTGCCACTTGGTCACCTGATGGCTAAG-GTTCTTCCTACAAGGATGTT 299
||||| ||||||||||| |||||||||||||||||| || || ||||| |||||||||||
Sbjct 241 CAGATCGCGGTCGTGCCGCTTGGTCACCTGATGGCT-AGAGTGCTTCCGACAAGGATGTT 299
Query 300 CTTGGAAGGATCAAAGTGGGAGTTTT-CTATGAATCCAGGTCCTTTTAATGTCAAGGAAC 358
|||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct 300 CTTGGAAGGATCAAAGTGGGAGTTTTGC-ATGAATCCAGGTCCTTTTAATGTCAAGGAAC 358
Query 359 ATGTATTGATCACGATTTTTGCTAATTCGGGAGCTGGAACGGTTTATGCGACTCATATAC 418
|||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 359 ATGTTTTGATCACGATTTTCGCTAATTCGGGAGCTGGAACGGTTTATGCGACTCATATAC 418
Query 419 TTAGTGCAATTAAGCTCTATTATAAGAGATCTCTTCCATTTCTACCGGCTTTTCTCCTTA 478
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 419 TTAGTGCAATTAAGCTCTATTATAAGAGATCTCTTCCGTTTCTACCGGCTTTTCTGCTTA 478
Query 479 TGATCACAACGCAGTTTCTCGGATTTGGGTGGGCTGGTCTATTCCGTAAACATCTTGTTG 538
||||||| || |||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 479 TGATCACTACTCAGTTTCTCGGATTTGGGTGGGCTGGTCTATTCCGTAAGCACCTTGTTG 538
Query 539 AGCCTGGTGAAATGTGGTGGCCAAGCAATCTAGTTCAAGTGTCTCTCTTCAGTGCCTTGC 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 539 AGCCTGGTGAAATGTGGTGGCCAAGCAATCTAGTTCAAGTGTCTCTCTTCAGTGCCTTGC 598
Query 599 ACGAGAAGGAAAAGAAGAAAAAGGGAGGCATGACCCGAATCCAATTCTTCCTCATTGTCC 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 599 ACGAGAAGGAAAAGAAGAAAAAGGGAGGCATGACCCGAATCCAATTCTTCCTCATTGTCC 658
Query 659 TTGTTACCAGTTTTGCATACTACATTCTCCCTGGTTATTTATTCACAATGATAACTTCCA 718
|||| |||||||| |||||||| |||||||| |||||| |||||||||||||||||||||
Sbjct 659 TTGTGACCAGTTTCGCATACTATATTCTCCCCGGTTATCTATTCACAATGATAACTTCCA 718
Query 719 TCTCATGGATCTGTTGGCTTGGTCCCAAATCGGTTTTGGTTCACCAACTCGGTTCAGGTG 778
|||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct 719 TCTCATGGGTCTGTTGGCTTAGTCCCAAATCGGTTTTGGCTCACCAACTCGGTTCAGGTG 778
Query 779 AACAAGGTCTTGGTATTGGCGCAATTGGTATTGACTGGGCTACAATTAGCTCTTACCTCG 838
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 779 AACAAGGTCTTGGTATTGGCGCAATTGGTATTGACTGGGCTACAATTAGCTCTTACCTTG 838
Query 839 GTAGCCCACTCGCGAGTCCCTTATTCGCTACAATCAATGTAACCATCGGTTTTGTGGTGA 898
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct 839 GTAGCCCACTCGCGAGTCCCTTATTCGCTACCATCAATGTAACCATTGGTTTTGTGGTGA 898
Query 899 TCATGTATGTCGCCACTCCAATTTGCTATTGGCTAAATATTTACAAAGCCAAAACATATC 958
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 899 TCATGTATGTCGCCACTCCGATTTGCTATTGGCTAAATATTTACAAAGCCAAAACATATC 958
Query 959 CCATCTTCTCAAGTGGGCTTTTCATGGGCAATGGCTCGTCCTATGATGTTTTAAGCATCA 1018
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 959 CCATCTTCTCTAGTGGGCTTTTCATGGGCAATGGCTCGTCCTATGATGTTTTAAGCATCA 1018
Query 1019 TTGATAAGAAGTTTCATCTCGACCGAGATATATATGCAAAGACTGGTCCTATCAATATGA 1078
|||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||
Sbjct 1019 TTGATAAGAAGTTTCATCTCGACCGAGAGATCTATGCAAAGACTGGTCCTATCCATATGA 1078
Query 1079 GCACTTTCTTTGCAGTCACATATGGTCTTGGGTTTGCTACTTTGTCCGCAACTATTGTCC 1138
||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1079 GCACTTTCTTTGCTGTGACATATGGTCTTGGATTTGCTACTTTGTCCGCAACTATTGTCC 1138
Query 1139 ATGTTTTACTCTTCAACGGAAGGGATTTATGGAAACAAACAAGAGGTGCTTTTCAGAGGA 1198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1139 ATGTTTTACTCTTCAACGGAAGGGATTTATGGAAACAAACAAGAGGTGCTTTTCAGAGGA 1198
Query 1199 ACAAGAAAATGGATTTCCACACGAGAATCATGAAGAAAAACTATAGGGAAGTTCCTATGT 1258
|||||||||||||||| ||| ||||||||||||||||||||||||| |||||||| ||||
Sbjct 1199 ACAAGAAAATGGATTTACACGCGAGAATCATGAAGAAAAACTATAGAGAAGTTCCCATGT 1258
Query 1259 GGTGGTTTTATGTGATCCTCGTACTCAACATTGCGCTCATCATGTTCATATCATTCTACT 1318
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 1259 GGTGGTTTTATGTGATCCTCGTACTCAACATTGCGCTCATCATGTTCATCTCTTTCTACT 1318
Query 1319 ACAATGCAACCGTGCAGCTACCTTGGTGGGGAGTGTTGCTAGCTTGTGCCATTGCTGTCT 1378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1319 ACAATGCAACCGTGCAGCTACCTTGGTGGGGAGTGTTGCTAGCTTGTGCCATTGCTGTCT 1378
Query 1379 TCTTCACTCCGCTTATCGGTGTTATCGCCGCCACCACTAATCAGGAACCGGGTTTGAACG 1438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1379 TCTTCACTCCGCTTATCGGTGTTATCGCCGCCACCACTAATCAGGAACCGGGTTTGAACG 1438
Query 1439 TCATTACGGAATATGTAATCGGGTATCTCTATCCAGAACGTCCGGTTGCTAACATGTGCT 1498
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1439 TCATTACGGAATATGTAATCGGGTATCTCTATCCAGAACGTCCGGTTGCGAACATGTGCT 1498
Query 1499 TTAAAGTATATGGATACATCAGCATGACTCAGGCTCTAACATTCATCCAAGACTTCAAAC 1558
| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1499 TCAAAGTGTATGGATACATCAGCATGACTCAGGCTCTGACATTCATCCAAGACTTCAAAC 1558
Query 1559 TCGGACTCTACATGAAGATTCCTCCTAGAAGCATGTTCATGGCACAGGTGGTTGGGACGC 1618
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1559 TCGGTCTCTACATGAAGATTCCTCCTAGAAGCATGTTCATGGCACAGGTGGTTGGGACGC 1618
Query 1619 TTGTGTCTGTGGTAGTGTACACAGGAACTGCTTGGTGGTTAATGGTAGACATTCCTCATC 1678
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1619 TTGTGTCTGTGATAGTGTACACAGGAACTGCTTGGTGGTTAATGGTAGACATTCCTCATC 1678
Query 1679 TATGTGACAAATCTTTGCTTCCTCCAGATAGCGAATGGACATGTCCCATGGACCGTGTCT 1738
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1679 TATGTGACAAATCTTTGCTTCCTCCAGATAGCGAATGGACATGTCCGATGGACCGTGTCT 1738
Query 1739 TCTTTGATGCTTCAGTTATTTGGGGACTTGTAGGACCACGTAGAATGTTCGGTAACTTAG 1798
||||||||||||| || |||||||||||||| ||||||||||||||||| ||| |||| |
Sbjct 1739 TCTTTGATGCTTCGGTGATTTGGGGACTTGTGGGACCACGTAGAATGTTTGGTGACTTGG 1798
Query 1799 GAGAATACGCAGCCATAAACTGGTTCTTCCTCGTAGGTGCAATCGCTCCTTTCTTTGTCT 1858
||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct 1799 GAGAATACGCAGCCATAAACTGGTTCTTCCTCGTAGGTGCAATTGCTCCTTTCTTCGTCT 1858
Query 1859 GGCTAGCGACCAAAGCATTCCCAGCTCATAAATGGATCTCGAAGATTCATTTTCCGGTCA 1918
|||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |
Sbjct 1859 GGCTAGCGACCAAAGCGTTTCCAGCTCATAAATGGATCTCGAAGATTCATTTTCCGGTAA 1918
Query 1919 TTTTAGGAGCAACCTCGATGATGCCACCCGCGATGGCGGTTAACTTCACGAGTTGGTGCA 1978
| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1919 TCTTAGGAGCAACCTCGATGATGCCACCCGCGATGGCAGTTAACTTCACGAGTTGGTGCA 1978
Query 1979 TCGTTGCATTTGTGTTTGGACACTTTTTGTATAAGTACAAGAGACAGTGGTGGAAAAAGT 2038
|||| ||||||||||| |||||||| |||| ||||||||||||||||||||||| |||||
Sbjct 1979 TCGTGGCATTTGTGTTCGGACACTTCTTGTTTAAGTACAAGAGACAGTGGTGGACAAAGT 2038
Query 2039 ATAACTACGTTTTGTCGGGTGGTTTAGACGCGGGCACTGCGTTTATGACAATACTTATAT 2098
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct 2039 ATAACTACGTTTTGTCGGGTGGTTTAGACGCGGGAACTGCGTTTATGACAATACTGATAT 2098
Query 2099 TCCTATCGGTTGGACGCAAAGGAATTGGATTGTTGTGGTGGGGAAACGCTGATGATAGCA 2158
|||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2099 TCCTGTCGCTTGGACGCAAAGGAATTGGATTGTTGTGGTGGGGAAACGCTGATGATAGCA 2158
Query 2159 CAAACTGTAGCCTCGCGTCTTGTCCTACCGCTAAAGGCGTTATTATGCATGGATGTCCAG 2218
|||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||| |
Sbjct 2159 CAAACTGTAGCCTCGCTTCTTGCCCTACCGCTAAAGGCGTTATAATGCATGGATGTCCGG 2218
Query 2219 TTTTATGA 2226
||||||||
Sbjct 2219 TTTTATGA 2226
> Ahg492011 jgi|Araly1|492011|fgenesh2_kg.7__1444__AT4G27730.1
Length=2466
Score = 1483 bits (803), Expect = 0.0
Identities = 1704/2133 (80%), Gaps = 85/2133 (4%)
Strand=Plus/Plus
Query 53 ATGATGATCTGGACCGGTGCGTGGTGGAGGAGGTTGAGCTAACCGTTCCAAAAACCGATG 112
||||||| | ||||||||||| || |||||| ||||| || || || |||||||| |
Sbjct 100 ATGATGA--T-GACCGGTGCGTTGTACCGGAGGTAGAGCTCACTGTACCCAAAACCGACG 156
Query 113 ATCCAACGTTACCGGTTCTCACATTTCGAATGTGGACTT-TAGGTCTTGGTGCGTGTATC 171
|| || | ||||||||||||||||| || |||||| || | ||| | || ||||| ||
Sbjct 157 ATTCATCTTTACCGGTTCTCACATTCCGGATGTGG-GTTCTTGGTATAGGCGCGTGCATT 215
Query 172 ATACTCTCGTTCATAAACCAGTTTTTCTGGTACAG-ACAGATGCCGTTAACCATTAGCGG 230
||||||| ||||| |||||||||||||||||||| || ||||||||| | | | |||
Sbjct 216 GTACTCTCTTTCATCAACCAGTTTTTCTGGTACAGAAC-GATGCCGTTGAGTGTCACCGG 274
Query 231 AATCTCG-GCTCAGATTGCGGTCGTGCC-ACTTGGTCACCTGATGGCTAAGGTTCTTCCT 288
||||| | |||||||| || |||||||| | |||| || || ||||| | ||| |||||
Sbjct 275 AATCT-GCGCTCAGATCGCCGTCGTGCCGA-TTGGACATCTCATGGCGAGGGTGCTTCCG 332
Query 289 ACAAGGATG-TTCTTGGAAGGAT-CAAAGTGGGAGTT-TTCTATGAATCCAGGT-CCTTT 344
||||||| | ||||||||||| | | | || |||| || | || |||||| || ||
Sbjct 333 ACAAGGA-GATTCTTGGAAGG-TACGAGGTTTCAGTTCACCT-TAAACCCAGGTGCC-TT 388
Query 345 TAATGTCAAGGAACATGTAT-TGATCACGATTTTTGCTAATTCGGGAGCTGGAACGGTTT 403
|| |||||||||||||| | |||| || || ||||| ||||| || || || | ||||
Sbjct 389 CAACGTCAAGGAACATGT-TCTGATAACCATCTTTGCAAATTCCGGCGCCGGCTCCGTTT 447
Query 404 ATGCGACTCATATACTTAGTGCAATTAAGCTCTATTATAAGA-GAT-CTCTTCCATTT-C 460
| || ||||||||||||||||| |||||||| || ||||| | | | ||||||| ||| |
Sbjct 448 ACGCTACTCATATACTTAGTGCTATTAAGCTTTACTATAA-ACG-TCCTCTTCC-TTTCC 504
Query 461 TACCGGCTTTTCTCCTTATGATCACAACGCAGTTTCTCGGATTTGGGTGGGCTGGTCTAT 520
| || || |||||| | |||||||| || ||| |||| |||||||| ||||||||||| |
Sbjct 505 TCCCAGCGTTTCTCGTCATGATCACCACTCAGATTCTTGGATTTGGTTGGGCTGGTCTCT 564
Query 521 TCCGTAAACATCTTGTTGAGCCTGGTGAAATGTGGTGGCCAAGCAATCTAGTTCAAGTGT 580
| | ||||| |||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 565 TTAGGAAACACCTTGTTGAGCCTGGTGAAATGTGGTGGCCAAGCAATCTTGTTCAAGTCT 624
Query 581 CTCTCTTCAGTGCCTTGCACGAGAAGGAAAAGAAGAAAAAG-GGAGGCATGACCCGAATC 639
||||||| |||||||||||||||| |||||||| | || |||||||||| |||| |
Sbjct 625 CTCTCTTTGGTGCCTTGCACGAGAAAGAAAAGAA-ATCTAGAGGAGGCATGAGTCGAA-C 682
Query 640 -CAATTCTTCCTCATTGTCCTTGTTACC-AGTTTTGCATACTACAT-TCTCCCTGGTTAT 696
||||||||| | || ||||| || | | || ||||| |||||||| | ||| |||||||
Sbjct 683 ACAATTCTTCTTAATCGTCCTCGT-AGCTAGCTTTGCTTACTACATCTTTCC-TGGTTAT 740
Query 697 TTATTCACAATGATAACTTCCATCTCATGGATCTGTTGGCTTGGTCCCAAATCGGTTTTG 756
||||||| ||| |||| || ||||||||| | || |||||| ||||||||| || ||
Sbjct 741 CTATTCACCATGTTAACATCAATCTCATGGGTTTGCTGGCTTAATCCCAAATCAATTCTG 800
Query 757 GTTCACCAACTCGGTTCAGGTGAACAAGGTCTTGGTATTGGCGCAATTGGTATTGACTGG 816
|| |||||||||||||||||||||| |||||||||||||| | |||||| |||| |||
Sbjct 801 GTAAACCAACTCGGTTCAGGTGAACATGGTCTTGGTATTGGTTCCATTGGTTTTGATTGG 860
Query 817 G-CTACAATTAGCT-CTTACCTCGGTAGCCCACTCGCGAGTCCCTTATTCGCTACAATCA 874
| | || ||||| | |||| || || ||||| | || ||||| || |||||| | |||
Sbjct 861 GTC-ACCATTAG-TGCTTATCTTGGAAGCCCTTTAGCTAGTCCATTGTTCGCTTCCGTCA 918
Query 875 ATGTAACCATCGGTTTTGTGGTGATCATGTATGTCGCCACTCCAATTTGCTATTGGCTAA 934
||||| |||||||||| ||| || | |||||| | | ||| || |||| || ||||| |
Sbjct 919 ATGTAGCCATCGGTTTCGTGCTGGTTATGTATATTGTCACGCCTGTTTGTTACTGGCTTA 978
Query 935 ATATTTACAAAGCCAAAACATATCCC-ATCTTCTCAAGTGGGCTTTTCATGGGCAATGGC 993
| ||||| | ||||| || | |||| |||||||| || ||| |||||||| ||||||
Sbjct 979 ACATTTATGACGCCAAGACCT-TCCCTATCTTCTCTAGCCAGCTCTTCATGGGTAATGGC 1037
Query 994 TCGTCCT-ATGATGTTTTAAGCATCATTGATAAG-AAGTTTCATCTCGACCGAGATATAT 1051
|| | | ||||||| || ||||| ||||||| | ||||| ||||| ||||| | | |
Sbjct 1038 TCA-CGTTATGATGTGTTGAGCATTATTGATA-GCAAGTTCCATCTTGACCGGGCGGTTT 1095
Query 1052 A-TGCAAAGACTGG-TCCTATCAATATGAGCACTTTCTTTGCAGTCACATATGGTCTTGG 1109
| | | | ||| || ||| || || |||||||| |||||||| || || |||||||| ||
Sbjct 1096 ACT-CTAGGACCGGCTCC-ATTAACATGAGCACCTTCTTTGCTGTTACTTATGGTCTCGG 1153
Query 1110 GTTTGCTACTTTGTCCGCAACTATTGTCCATGTTTTACTCTTCAACGGAAGGGATTTATG 1169
||||||||| ||||| || || ||||||||||| ||| ||||||||||||| || || ||
Sbjct 1154 GTTTGCTACGTTGTCTGCCACCATTGTCCATGTCTTAGTCTTCAACGGAAGTGACTTGTG 1213
Query 1170 GAAACAAACAAGAGGTGCTTTTCAGA-GGAACAAGAAAATGGATTTCCACACGAGAATCA 1228
|||||| |||||||| || ||| | | ||| |||||||||||| | ||||| |||||||
Sbjct 1214 GAAACAGACAAGAGGGGCCTTTAAAAAGGAT-AAGAAAATGGATATACACACAAGAATCA 1272
Query 1229 TGAAGAAAAACTATAGGGAAGTTCCTAT-GTGGTGGTTTTATG-TGATCCTCGTACTCAA 1286
||||||||||||| ||||||||||| || ||||||||||| || | ||||| |||| ||
Sbjct 1273 TGAAGAAAAACTACAGGGAAGTTCC-ATTGTGGTGGTTTT-TGGTCATCCTTTTACTGAA 1330
Query 1287 CATTGCGCTCATCATGTTCATATCATT-CTACTACAATGCAACCGTGCAGCTACCTTGGT 1345
|| ||||||||||||||||| || | | ||||||| || ||||||||||| |||||||
Sbjct 1331 TATCGCGCTCATCATGTTCATCTCCGTGC-ACTACAACGCGACCGTGCAGCTTCCTTGGT 1389
Query 1346 GGGGAGTGTTGCTAGCTTGTGCCATTGCTGTCTTCTT-CACTCCGCTT-ATCGGTGTTAT 1403
|||||||||| || |||||||||||||| ||| ||| |||||| || |||||||| ||
Sbjct 1390 GGGGAGTGTTACTTGCTTGTGCCATTGCCATCT-CTTTCACTCCT-TTGATCGGTGTCAT 1447
Query 1404 CGCCGCCACCACTAATCAGGAACCGGGTTTGAACGTCATTACGGAATATGTAATCGGGTA 1463
|| || ||||||||||||| ||||||||||||| |||| || || ||||| ||||||||
Sbjct 1448 AGCTGCTACCACTAATCAGGCACCGGGTTTGAACATCATAACCGAGTATGTTATCGGGTA 1507
Query 1464 TCTCTATCCAGAACGTCCGGTTGCTAACATGTGCTTTAAAG-TATATGGATACATCAGCA 1522
| | || || |||||||| ||||| |||||||| ||| ||| | ||||||||||| || |
Sbjct 1508 TATATACCCGGAACGTCCTGTTGCCAACATGTG-TTTCAAGGTCTATGGATACATTAGTA 1566
Query 1523 TGACTCAGGCTCTAACATTCAT--CCAAGACTTCAAACTCGGAC-TCTACATGAAGATTC 1579
||||||| || ||||| ||||| || || ||||| || || | | ||||||||||| |
Sbjct 1567 TGACTCAAGCGCTAACTTTCATTTCC--GATTTCAAGCTTGGTCAT-TACATGAAGATCC 1623
Query 1580 CTCCTAGAAGCATGTTCATGGCACAGGTGGTTGGGACGCTTGTGTCTGTGGTAGTGTACA 1639
| |||||| |||||||||||| |||||| ||||||| |||||| | || || || ||||
Sbjct 1624 CGCCTAGATCCATGTTCATGGCTCAGGTGTTTGGGACTCTTGTGGCGGTTGTTGTTTACA 1683
Query 1640 CAGGAACTGCTTGGTGGTTAATGGTAGACATTCCTCATCTATGTGACAAATCTTTGCTTC 1699
||||||| |||||||||||||||| ||| ||||||||||| ||||||| | |||||||
Sbjct 1684 CAGGAACAGCTTGGTGGTTAATGGAAGAGATTCCTCATCTCTGTGACACGGCCTTGCTTC 1743
Query 1700 CTCCAGATAGCGAATGGACATGTCCCATGGACCGTGTCTTCTTTGATGCTTCAGTTATTT 1759
|| |||| ||| ||||||| |||||||||||||| || |||||||| || || || ||||
Sbjct 1744 CTTCAGACAGCCAATGGACTTGTCCCATGGACCGCGTTTTCTTTGACGCCTCTGTGATTT 1803
Query 1760 GGGGACTTGTAGGACCACGTAGAATGTTCGGTA-AC-TTAGGAGAATACGCAGCCATAAA 1817
||||||| || ||||||||||| |||| || | || || ||||||||| || | ||
Sbjct 1804 GGGGACTAGTGGGACCACGTAGGGTGTTTGG-AGACCTT-GGAGAATACTCAAATGTCAA 1861
Query 1818 CTGGTTCTTCCTCGTAGGTGCAATCGCTCCTTTCTTTGTCTGGCTAGCGACCAAAGCAT- 1876
||||||||||||||| || || || ||||| |||| || |||||||| || |||| ||
Sbjct 1862 CTGGTTCTTCCTCGTCGGAGCCATAGCTCCACTCTTAGTTTGGCTAGCCAC-AAAG-ATG 1919
Query 1877 T-CCCAGCTCATAAATGGATCTCGAAGATTCATTTTCCGGT-CATTTTAGGAGCAACCTC 1934
| ||| ||||| | ||||||||| ||||||||| | || || | || | ||||| ||| |
Sbjct 1920 TTCCCGGCTCAGACATGGATCTCCAAGATTCATATCCCTGTTC-TTGTGGGAGCCACCGC 1978
Query 1935 GATGATGCCACCCGCGATGGCGGTTAACTTCACGAGTTGG-TGCATCGTTGCATTTGTGT 1993
||||||||||| || | || ||||||||||| || ||| | |||||| ||||| | |
Sbjct 1979 AATGATGCCACCAGCAACAGCAGTTAACTTCACCAGCTGGCT-CATCGTCGCATTCATCT 2037
Query 1994 TTGGACACTT--TTTGTATAAGTACAAGAGACAGTGGTGGAAAAAGTATAACTACGTTTT 2051
|||| ||||| ||| | ||||||| |||| ||||||||| ||||||||||| || ||
Sbjct 2038 TTGGCCACTTCATTT-TC-AAGTACAGGAGAGAGTGGTGGACGAAGTATAACTATGTGTT 2095
Query 2052 GTCGGGTGGTTTAGACGCGGGCACTGCGTTTATGACAATACTTATATTCCTATCGGTTGG 2111
||| |||||||||||||| ||| | || |||||||| |||||| | || || | | ||
Sbjct 2096 GTCTGGTGGTTTAGACGCTGGCTCAGCTTTTATGACCATACTTCTGTTTCTGGCACTCGG 2155
Query 2112 ACGCAAAGGAATTGGATTGTTGTGGTGGGGAAA 2144
||| |||||||||| | || ||||||||||||
Sbjct 2156 ACGAAAAGGAATTGAAGTGCAGTGGTGGGGAAA 2188
> Ahg916994 jgi|Araly1|916994|Al_scaffold_0008_1745
Length=2220
Score = 553 bits (299), Expect = 2e-156
Identities = 1495/2050 (73%), Gaps = 172/2050 (8%)
Strand=Plus/Plus
Query 91 CTAACCGTTCCAAAAACCGATGATCCAACGTT-ACCG--GTTCTCACATTTCGAATGTGG 147
||||| || || |||||||| |||||||| || |||| | | | |||||| | ||||||
Sbjct 91 CTAACTGTGCCCAAAACCGACGATCCAAC-TTCACCGACGGT-T-ACATTTAGGATGTGG 147
Query 148 ACTT-TAGGTC-TTGGTGC--GTGTATCATACTCTC-GTTCATAAACCAGTTTTTCTGGT 202
|| | || | || | || |||| || | | || ||| ||||||||||||||||||
Sbjct 148 -GTTCTTGG-CATTAGCGCTTGTGT-TC-TTTTGTCATTTC-TAAACCAGTTTTTCTGGT 202
Query 203 ACAG-A-CAGATGCCGTTAACCAT-TAGCGGAATCTCGGCTCAGATTGCGGTCG-TGCCA 258
|||| | || || || || |||| | | | |||||||||||||| || | | |||
Sbjct 203 ACAGAACCA-AT-CCTTTGTCCATCT-CCTCTGTTTCGGCTCAGATTGCTGTTGTTCCCA 259
Query 259 CTTGGTCACCTGATGGCTAAG-GTTCTTCCTACAAGGATG-TTCTTGGAA-GGATCAAAG 315
||||||| || |||||| || |||||||| ||||||| | ||||| ||| ||| | | |
Sbjct 260 -TTGGTCATCTCATGGCT-AGAGTTCTTCCCACAAGGA-GATTCTTCGAAGGGA-CGAGG 315
Query 316 TGGGAGTTT-TCTATGAATCCAGGTCCTTTTAATGTCAAGGAACATG-TATTGATCAC-G 372
| || ||| | |||||||| ||||| |||| | ||| ||||||| | || || || |
Sbjct 316 T-GGTCTTTCACAATGAATCCTGGTCCGTTTAGTACCAAAGAACATGTTCTT-ATAACTG 373
Query 373 ATTTTTGCTAATTCGGGAGCTGGAACGGTTTATGCGACTCATATACTTAGTGCAATTAAG 432
| ||||| || || || |||| | || || || | |||||| |||||||| |||||
Sbjct 374 -TGTTTGCAAACTCAGGCTCTGGGTCTGTATACGCTAGTCATATTCTTAGTGCTGTTAAG 432
Query 433 CTCTATTATAAGAGATCTCTTCCATTTC-TACCGGCTTTTCTCCTTATGATCACAACGCA 491
|| ||||| |||||| ||| ||||| |||| ||||| ||| |||||||||| || ||
Sbjct 433 CTTTATTACAAGAGAAGGCTT-GATTTCTTACCTGCTTTGCTCGTTATGATCACCACTCA 491
Query 492 -GTTTCTCGGATTTGGGTGGGCTGGTCTAT-TCCGTAAACATCTT-GTTGAGCCTGGTGA 548
|| | | |||||||| ||||||||| | | | | |||||| || ||||| ||||||||
Sbjct 492 GGTAT-TGGGATTTGGTTGGGCTGGTTTGTAT-AGGAAACAT-TTAGTTGATCCTGGTGA 548
Query 549 AATGTGGTGGCCAAGCAATCTAGTTCAAGTGTCTCTCTTCAGTGCCTTGCACGAGAAGGA 608
||||||||||||||||||||| |||||||||||||||||||| || ||||||||||| ||
Sbjct 549 AATGTGGTGGCCAAGCAATCTTGTTCAAGTGTCTCTCTTCAGAGCATTGCACGAGAAAGA 608
Query 609 AAAGAAGA--AAAAGGGAGGCATGACCCGAA-TCCAATTCTTCCTCATTGTC-CTTGTTA 664
|| || | |||| || || || | ||| || | ||||| |||| | || | |
Sbjct 609 GAACAA-ATCAAAATGG-GGAATTAGTAGAAATC-AGTTCTTTGTCATCA-CGCTCATCA 664
Query 665 CCAGTTT-TGCATACTA-CATTCTCCCTGGTTATTTATTCACAATGATAACTTCCATCTC 722
| || || | | || || | | || ||||||||| | ||||| | |||| || ||||
Sbjct 665 CTAGCTTCTCC-TATTATC-TCCTACCTGGTTATCTCTTCACGGTCTTAACCACCGTCTC 722
Query 723 ATGGATCTGTTGGCTTGGTCCC-AAATCGGTTTTGGTTCACCAACTCGGTTCAGG-TGAA 780
||| | |||||| || | ||| |||||| || | || |||| || |||||||| | |
Sbjct 723 TTGGTTATGTTGGATTAG-CCCTAAATCGATTCTAGTAAACCAGCTTGGTTCAGGGTCAG 781
Query 781 CAAGGTCTTGGTATTGGCGCAATTGGTATTGACTGGGCTACAATTAGC-TCTTACCTCGG 839
| ||||| |||||||| | ||||| | |||||| | || || || || || || ||
Sbjct 782 CT-GGTCTAGGTATTGGTTCCTTTGGTCTGGACTGGTCAACCATC-GCGTCATATCTTGG 839
Query 840 TAGCCCACTCGCGAGTCCC-TTATTCGC-TACAATCAA-TGTAACCATCGG-TT-TTGTG 894
||||||||||| || ||| || || || | || ||| | | | | || || || |
Sbjct 840 AAGCCCACTCGCTAG-CCCATTCTTTGCCT-CAG-CAAATATTGCGGTTGGGTTCTT-TC 895
Query 895 GTGATCATGTATGTCGCCACTCCAATTTGCTATTGGCTAAATATT-TACAAAGCCAAAAC 953
|| | ||||| || ||| || | || || | ||| || || ||||| ||||||||
Sbjct 896 TTG-TGATGTACGTAATCACACCTCTCTGTTACTATCTAGAT-TTCTACAATGCCAAAAC 953
Query 954 ATATCCCA-TCTTCTCAAGTGGGCT-TTTCATGGGCAATGGCTCGTCCTATGATGTTTTA 1011
| ||||| ||| ||| || || ||| | | || ||| | || ||||
Sbjct 954 CT-TCCCAATCTACTCCGGTAAACTCTTTG-TAGCCAGTGGGAAGGAATACAATGTAACG 1011
Query 1012 AGCATCATTGATAAGAAGTTTCATC-TCGACCG-A-GATATATATGCAAAGACTGGTCCT 1068
|||||||| ||| || |||| | |||| || | | | || ||| |||| || ||
Sbjct 1012 AGCATCATCGATGCCAA-TTTCCGCCTCGATCGTAAGGC-T-TACGCAGAGACCGGACC- 1067
Query 1069 A-TCAATATGAGCACTTTCTTTGCAGTCACATATGGTCTTGGGTTTGCTACTTTGTCCGC 1127
| || | ||||||||||||||||| || || ||||| || || ||||| || ||||| ||
Sbjct 1068 AGTCCACATGAGCACTTTCTTTGCCGTGACTTATGGACTCGGCTTTGCGACCTTGTCTGC 1127
Query 1128 AACTATTGTCCATGTTTTACTCTTCAACGG-AAGGGAT-TTATGGAAACAAAC-AAGAGG 1184
| |||||||||||| | || |||||||| || | || || |||| ||||| || |||
Sbjct 1128 TAGTATTGTCCATGTCCTGCTTTTCAACGGCAAAG-ATCTT-TGGACTCAAACCAA-AGG 1184
Query 1185 TGCTTTTCAGAGGAA-CAAGAAAATGGATTTCCACACGA-GAATCATGAAGAAAAACTAT 1242
|| |||| || || ||||||||||||| | || || | || ||||||||| || ||
Sbjct 1185 AGCGTTTC-GAAAAAACAAGAAAATGGATATACATACAAAGA-TCATGAAGAGGAATTAC 1242
Query 1243 AGGGAAGTTCCTATGTGGTGGTTT-TATGTGATCCTCGTAC-TCAA-CATTGC-GCTCAT 1298
| ||||||||| | ||||||||| | | ||| ||| | | || | |||| | | ||
Sbjct 1243 AAAGAAGTTCCTCTCTGGTGGTTTCTTTC-GATTTTCGC-CGTGAATC-TTGCAGTT-AT 1298
Query 1299 CATGTTCATATC-ATTCTACTACAATG-CAACCG-TGCAGCTACCTTGGTGGGGAG-TGT 1354
| ||||||| ||| ||||| || | || | | | ||||| || |||||||||| | |
Sbjct 1299 TGTCTTCATATGTATT-TACTATAA-GACA-CAGATTCAGCTTCCATGGTGGGGAGCT-T 1354
Query 1355 TGCTAG-CTTGTGCCATTGCTGTCTTCTTCACTCCGCTTATCGGTGTTATCGCCGCCACC 1413
| || | ||||| || ||| ||||||||||||| || | ||||| ||| |||||
Sbjct 1355 T-CTTGGCTTGTTTGATAGCTATCTTCTTCACTCCTCTCGTTGGTGTGATCATGGCCACT 1413
Query 1414 ACTAATCAGGAACCGGGTTTGAACGTCATTACGGAATATGTAATCGGGTAT-CTCTATCC 1472
||||| |||| |||||| ||||| | || |||||||| |||| |||||| | |||||
Sbjct 1414 ACTAACCAGGCTCCGGGTCTGAACATTATCACGGAATACATAATTGGGTATGCA-TATCC 1472
Query 1473 AGA-ACGTCCGGTTGCTAACATGTGCTTTAA-AGTATATGGATACATCAGCATGACTCAG 1530
||| | | || ||||||||||| ||||| || | | || ||||||||||||||| ||||
Sbjct 1473 AGAGA-GACCAGTTGCTAACATATGCTTCAAGACT-TACGGATACATCAGCATGTCTCAA 1530
Query 1531 GCTCTAACATTCATC-CAAGACTTCAAACTCGGA-CTCTACATGAAGATTCCTCCTAGAA 1588
|| | || ||| || | || || || || ||| || ||||||||||| || || ||||
Sbjct 1531 TCTTTGACTTTCCTCTCT-GATTTGAAGCTTGGAACT-TACATGAAGATCCCACCAAGAA 1588
Query 1589 GCATGTTCATGGCACAGGTGGTTGGGACGCTT--GT-GTCTGTGGTAGTGTACACAGGAA 1645
|||||| ||||||||||| || ||| | ||| || | | || | || ||| || |
Sbjct 1589 CCATGTTTATGGCACAGGTTGT-GGG-CACTTTAGTAG-CAGTCATCGTTTACGCAATCA 1645
Query 1646 CTGCTTGGTGGTTAATGG-TAGACATTCCTCATCTATGTGACAAATCTTTGCTTCCTCCA 1704
| ||||||||| |||||| | || || || |||| ||||| | ||| ||||||| |||
Sbjct 1646 CAGCTTGGTGGCTAATGGCT-GAAATCCCAAATCTCTGTGATACTTCTCTGCTTCCACCA 1704
Query 1705 G-ATAG-CGAATGGACATGTCCCAT-GGACCGTGTCTTCTTTGATGCTTCAGTTATTTGG 1761
| | || | | ||||| ||||| || ||| || |||||||| || || ||||| || |||
Sbjct 1705 GGA-AGTC-AGTGGACTTGTCC-ATCGGATCGAGTCTTCTTCGACGCATCAGTGATCTGG 1761
Query 1762 GGACTTGTAGGACCACGTAGAATGTTCGGTAA-CTTAGGAGAATACGCAGCCATAAACTG 1820
||||||||||||||| | |||||||| ||| | ||| ||||||||| || |||||||||
Sbjct 1762 GGACTTGTAGGACCAAGAAGAATGTTTGGTGATCTT-GGAGAATACTCAAACATAAACTG 1820
Query 1821 GTTCTTCCTCGTAGGTGCAATCGCTCCTTTCTTTG-TCTGGCT-AGCGACCAA-AG-CAT 1876
||||||| | | ||||||||| ||||| | ||| ||| || ||| || || | | |
Sbjct 1821 GTTCTTCGTAGGAGGTGCAATAGCTCCAG-CATTGGTCTA-CTTAGCCAC-AAGACTC-T 1876
Query 1877 TCCCAGCTCAT-AAATGGATCTCGAAGATTCATTTTCCGGT-CATT-TTAGGAGCAACCT 1933
||||| || ||||||||||| || ||||| | || || | | || ||||| ||
Sbjct 1877 TCCCAAA-CAAGAAATGGATCTCAAACATTCACATCCCTGTTC-TGGTT-GGAGCCACAG 1933
Query 1934 CGATGATGCCACCCGCGA-TGGCGGTTAACTTCACGAGTTGGTGCATCGTT--G-CATTT 1989
| || |||||||| || || |||||||||||||||| ||| | ||||| | | |||
Sbjct 1934 CTATAATGCCACCAGCTTCTG-CGGTTAACTTCACGAGCTGG--C-TCGTTATGGCGTTT 1989
Query 1990 GTGTTTGGACACTTTT-TGTAT-AAGTACA-A-GAGACAGTGGTGGAAAA-AGTATAACT 2044
||||||||||| ||| ||| | ||||||| | |||| | |||||| | | | |||||||
Sbjct 1990 GTGTTTGGACA-TTTCGTGT-TCAAGTACAGAAGAGA-A-TGGTGGCAGAGA-TATAACT 2044
Query 2045 ACGTTTTGTC 2054
| ||| ||||
Sbjct 2045 ATGTTCTGTC 2054
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 83798539000
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5