BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G55960.1 Length=2422 Score E Sequences producing significant alignments: (Bits) Value Ahg950248 jgi|Araly1|950248|scaffold_802135.1 3182 0.0 Ahg952526 jgi|Araly1|952526|scaffold_84000001.1 1829 0.0 Ahg917283 jgi|Araly1|917283|Al_scaffold_0008_2034 710 0.0 > Ahg950248 jgi|Araly1|950248|scaffold_802135.1 Length=1989 Score = 3182 bits (1723), Expect = 0.0 Identities = 1900/1986 (96%), Gaps = 9/1986 (0%) Strand=Plus/Plus Query 139 AGAGA-TTGATCGATGGAATTGGTCCCGTACGATTCGGAGACGAAATCATCGATCCCCAC 197 ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 8 AGAGATTTGATTGATGGAATTGGTCCCGTACGATTCGGAGACGAAATCATCGATCCCTAC 67 Query 198 AAATCTCGCGTGGCAAGAGATGTTTCGTTCCGCTTCATCTCGTAAACCTCAAGACCCTCC 257 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 68 AAATCTCGCGTGGCAAGAGATGTTTCGTTCCGCTTCATCGCGTAAACCTCAAGACCCTCC 127 Query 258 GTCTTCTTCTTCTTCATCGCCACCGCGTAAACCTTCCGGCGATGGATCATCA---AGCAA 314 | |||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 128 G---TCTTCTTCTTCATCGCCACCGCGTAAACCTTCCGGCGATGGATCATCATCCGGCAA 184 Query 315 AACATCTTTATCAACCGTTGATTCCCAAGCCCGTCTCGCTATGTACATAGCAATGGCTCA 374 ||||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||||| Sbjct 185 AACATCTTTATCAACCGCTGATTCACAAGCACGTCTCGCTATGTACATAGCAATGGCTCA 244 Query 375 CGCTGGTCTCGCTTTCGCCATTTGTGTTCTGTATTTCGTCGGAAAGCTATTACAAGAGTA 434 ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 245 CGCTGGTCTCGTTTTCGCCATTTGTGTTCTGTATTTCGTTGGAAAGCTATTACAAGAGTA 304 Query 435 TCTAAGACCGATTCAATGGGCGATTCTCTGTTCGATTCCTTTACGAGGTATTCAAGAAAC 494 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 305 TCTAAGACCGATTCAATGGGCGATTCTCTGTTCGATTCCGTTACGAGGTATTCAAGAAAC 364 Query 495 CCTTGTTGATTTCTGGAGCGAGCCTTTGAAATTAGGGCTTACGGAAGTTGTTCTCGCTGT 554 |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct 365 CCTTGTTGATTTCTGGAGTGAGCCTTTGAAATTAGGGCTAACGGAAGTTGTTCTCGCTGT 424 Query 555 TCCTGTTTCTGTCTTCAATGTTTTCATCGGGTCGATTGTGGATATTAAAAA-CGTCTGCT 613 |||||||||||||||||||||||||||||| || ||||||||||||||||| | |||||| Sbjct 425 TCCTGTTTCTGTCTTCAATGTTTTCATCGGATCCATTGTGGATATTAAAAATC-TCTGCT 483 Query 614 TTAGGGTTTTTCTTAGGAGATCGAAACCTAAGAGAACGAGGAAGAAGAACGATACTGGGT 673 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 484 TTAGGGTTTTTCTTAGGAGATCGAAACCTAAGAGAACGAGGAAGAAGAACGGTACTGGGT 543 Query 674 TTTCTAAACTGGTTAAATGGTTAGTCTCTTTTGGTGTCTTTGTCATTGCTTATGAGAGGA 733 |||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 544 TTTCCAAATTGGTTAGATGGTTAGTCTCTTTTGGTGTCTTTGTCATTGCTTATGAGAGGA 603 Query 734 TTGGTGGAATTGGGTCTCTTGTCATTCTCTCTTTAGGGTTTTTGTTTAGTTCCAAGAATG 793 |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 604 TTGGGGGAATTGGGTCTCTTGTGATTCTCTCTTTAGGGTTTTTGTTTAGTTCCAAGAATG 663 Query 794 TTGATTCGTCTCTCTCTGCGGTCTCTTCTCTGAGGAGTAATAGTTTTAGGAGAAGCCATT 853 | |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct 664 TCGATTCGTCTCTCTCTGCGGTTTCTTCTCTGAGGAGTAATAGTTTTAGGAGAAGCTATT 723 Query 854 TCACTGCTTATTTCACTAGAGGGATAATGACGAGATTGAATACTATAGTTGCTATTGGTT 913 |||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||| Sbjct 724 TCACTGCTTATTTCACTAGAGGGATAATGAAGAGATTGAATACAATTGTTGCTATTGGTT 783 Query 914 TGATTGTGCTCATGATTGTTGGATCTTTGACTGGTGTCATCTTCTTCTCGTATAAGATTG 973 |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| | Sbjct 784 TGATTGTGCTTATGATTGTTGGTTCTTTGACTGGTGTCATCTTCTTCTCGTATAAGATCG 843 Query 974 GTGTTGAAGGGAAAGATGCTGTTTATTCTCTGAAATCTCATGTTGAAGAGAGTAATTACG 1033 |||||||||||||||| || ||||||||| | |||||||||||||||||||||||||||| Sbjct 844 GTGTTGAAGGGAAAGACGCGGTTTATTCTTTAAAATCTCATGTTGAAGAGAGTAATTACG 903 Query 1034 CTGAGAAGATTGGGATCAAGCAATGGATGGATGAGAATGATGTTCCGGGAATGGTTGATA 1093 ||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||| Sbjct 904 CTGAGAAGATTGGAATCAAGCAATGGATGGATGAGAATGATGTTCCTGGAATGGTGGATA 963 Query 1094 TGTATACAACGAAGTTTTATGAAACGGTTTCTGAGCAGATTGATAGTTTGGCAATGCAGT 1153 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 964 TGTATACGACGAAGTTTTATGAAACGGTTTCTGAGCAGATTGATAGTTTGGCAATGCAGT 1023 Query 1154 ATAATATGACGGAGTTAGTCACTGGGATTAAGCATTTTGTGATCGGGCATCCTCAGAACA 1213 |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct 1024 ATAATATGACGGAGTTAGTCACGGGGATTAAGCATTTCGTGATCGGGCATCCTCAGAACA 1083 Query 1214 CGTCGACGCCTTCCACGGCGCTTATAACTCCGTCTCCTTATACAGAGAAGCTCATGAGTT 1273 ||||||| || || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1084 CGTCGACACCATCTACGGCGCTTATAACTCCGTCTCCTTATACAGAGAAGCTCATGAGTT 1143 Query 1274 TGAGGACTCGGGTTAAGAATCGAGAGTGGAGTCAGATATACTCGGAGGTTGATGTGATCT 1333 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| | Sbjct 1144 TGAGGACTCGGGTTAAGAATCGAGAATGGAGTCAGATCTACTCGGAGGTTGATGTGATTT 1203 Query 1334 TCAGGGAGCTTATTATCACTAGAGAAGATTTAGTAGAGAAAGCTAAAGGCTTTGCTGTTA 1393 ||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||| Sbjct 1204 TCAGGGAGCTTATTATCACAAGAGAAGATTTGGTGGAGAAAGCTAAAGGCTTTGCTGTTA 1263 Query 1394 AAGGAATGGATGTATCGCAACGGGTTTTCTCGAGCAGCGCATCGGTTGTTGGAGGCGGTG 1453 |||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||| Sbjct 1264 AAGGAATGGATGTATCTCAACGGGTTTTCTCAAGCAGCGCATCAGTTGTTGGAGGCGGTG 1323 Query 1454 CTAAGTTCGTTTTCTCTATTGGAAACTTGATAATCTCAGGAGCAGCAGAGTTTTTCAACT 1513 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1324 CTAAGTTCGTTTTCTCTATTGGAAACTTGATAATCTCGGGAGCAGCAGAGTTTTTCAACT 1383 Query 1514 TTATCTCTCAGCTAATGATTTTCATTTGGGTTTTATACATTCTTATCACATCAGAATCAG 1573 ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct 1384 TTATCTCTCAGCTAATGGTTTTCATTTGGGTTTTATACATTCTAATCACATCAGAATCAG 1443 Query 1574 GCGGTGTGACTGAGCAAGTCATGAACATGCTCCCGATCAACGCAAGCGCTAGAAACAGAT 1633 | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1444 GTGGTGTGACTGAGCAAGTCATGAACATGCTCCCGATCAACGCAAGTGCTAGAAACAGAT 1503 Query 1634 GTGTCGAAGTCTTAGACTTAGCGATATCCGGCGTGCTTTTAGCAACAGCGGAAATCGCCT 1693 ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1504 GTGTCGAAGTCCTAGACTTAGCGATCTCCGGCGTGCTTTTAGCAACAGCGGAAATCGCCT 1563 Query 1694 TCTTCCAAGGATGTCTCACTTGGCTATTGTTTAGACTATACAATATACATTTCCTTTACA 1753 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1564 TCTTCCAAGGATGTCTCACTTGGCTATTGTTTAGACTATACAATATACATTTCCTTTACA 1623 Query 1754 TGTCAACCGTTCTTGCCTTCATCAGCGCTCTGTTACCGATTTTCCCTTACTGGTTCGCGA 1813 |||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||| Sbjct 1624 TGTCGACCGTTCTTGCCTTCATCAGTGCTCTGTTACCGATTTTCCCTTACTGGTTTGCGA 1683 Query 1814 CAATCCCAGCGGCTTTGCAGCTCGTGCTAGAAGGAAGATATATTGTTGCAGTGATTTTAT 1873 ||||||||||||||||||| || ||||||||||||||||| ||| ||||||| | | ||| Sbjct 1684 CAATCCCAGCGGCTTTGCAACTAGTGCTAGAAGGAAGATACATTATTGCAGTTACTCTAT 1743 Query 1874 CTGTGACTCATCTTGTGCTAATGGAGTATGGTGCTTCAGAGATTCAAGATGACATTCCTG 1933 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1744 CTGTGACTCATCTTGTGCTAATGGAGTATGGTGCTTCAGAGATTCAAGATGACATTCCTG 1803 Query 1934 GGTCCAATGCTTACCTTACTGGACTAAGTATTATTGGTGGAGTCACTCTGTTTCCTTCTG 1993 |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1804 GGTCCAATGCTTACATTACTGGACTAAGTATTATTGGTGGAGTGACTCTGTTTCCTTCTG 1863 Query 1994 CTCTAGAGGGAGCGATAATGGGGCCGTTGATAACGACGGTGGTGATTGCTTTGAAGGATC 2053 |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1864 CTCTCGAGGGAGCGATAATGGGACCGTTGATAACGACGGTGGTGATTGCTTTGAAGGATC 1923 Query 2054 TGTATGCAGAGTTTGTTCTGAATGAGCCAAAGAAGATCAATTAGTTGTTATTGGTTTCTT 2113 | ||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||| Sbjct 1924 TATATGCAGAGTTTGTTCTGAATGATCCAAAGAAGATCAATTAGATCTTATTGGTTTCTT 1983 Query 2114 TAATAG 2119 | |||| Sbjct 1984 TGATAG 1989 > Ahg952526 jgi|Araly1|952526|scaffold_84000001.1 Length=1868 Score = 1829 bits (990), Expect = 0.0 Identities = 1082/1128 (96%), Gaps = 0/1128 (0%) Strand=Plus/Plus Query 875 GGATAATGACGAGATTGAATACTATAGTTGCTATTGGTTTGATTGTGCTCATGATTGTTG 934 ||||||||| |||||||||||| || ||||||||||||||||||||||| |||||||||| Sbjct 700 GGATAATGAAGAGATTGAATACAATTGTTGCTATTGGTTTGATTGTGCTTATGATTGTTG 759 Query 935 GATCTTTGACTGGTGTCATCTTCTTCTCGTATAAGATTGGTGTTGAAGGGAAAGATGCTG 994 | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct 760 GTTCTTTGACTGGTGTCATCTTCTTCTCGTATAAGATCGGTGTTGAAGGGAAAGATGCGG 819 Query 995 TTTATTCTCTGAAATCTCATGTTGAAGAGAGTAATTACGCTGAGAAGATTGGGATCAAGC 1054 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 820 TTTATTCTCTGAAATCTCATGTTGAAGAGAGTAATTACGCTGAGAAGATTGGAATCAAGC 879 Query 1055 AATGGATGGATGAGAATGATGTTCCGGGAATGGTTGATATGTATACAACGAAGTTTTATG 1114 ||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||| Sbjct 880 AATGGATGGATGAGAATGATGTTCCTGGAATGGTGGATATGTATACGACGAAGTTTTATG 939 Query 1115 AAACGGTTTCTGAGCAGATTGATAGTTTGGCAATGCAGTATAATATGACGGAGTTAGTCA 1174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 940 AAACGGTTTCTGAGCAGATTGATAGTTTGGCAATGCAGTATAATATGACGGAGTTAGTCA 999 Query 1175 CTGGGATTAAGCATTTTGTGATCGGGCATCCTCAGAACACGTCGACGCCTTCCACGGCGC 1234 | |||||||||||||| ||||||||||||||||||||||||||||| || || ||||||| Sbjct 1000 CGGGGATTAAGCATTTCGTGATCGGGCATCCTCAGAACACGTCGACACCATCTACGGCGC 1059 Query 1235 TTATAACTCCGTCTCCTTATACAGAGAAGCTCATGAGTTTGAGGACTCGGGTTAAGAATC 1294 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1060 TTATAACTCCGTCTCCTTATACAGAGAAGCTCATGAGTTTGAGGACTCGGGTTAAGAATC 1119 Query 1295 GAGAGTGGAGTCAGATATACTCGGAGGTTGATGTGATCTTCAGGGAGCTTATTATCACTA 1354 |||| ||||||||||| |||||||||||||||||||| |||||||| ||||||||||| | Sbjct 1120 GAGAATGGAGTCAGATCTACTCGGAGGTTGATGTGATTTTCAGGGAACTTATTATCACAA 1179 Query 1355 GAGAAGATTTAGTAGAGAAAGCTAAAGGCTTTGCTGTTAAAGGAATGGATGTATCGCAAC 1414 |||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1180 GAGAAGATTTGGTGGAGAAAGCTAAAGGCTTTGCTGTTAAAGGAATGGATGTATCTCAAC 1239 Query 1415 GGGTTTTCTCGAGCAGCGCATCGGTTGTTGGAGGCGGTGCTAAGTTCGTTTTCTCTATTG 1474 |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1240 GGGTTTTCTCAAGCAGCGCATCAGTTGTTGGAGGCGGTGCTAAGTTCGTTTTCTCTATTG 1299 Query 1475 GAAACTTGATAATCTCAGGAGCAGCAGAGTTTTTCAACTTTATCTCTCAGCTAATGATTT 1534 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1300 GAAACTTGATAATCTCGGGAGCAGCAGAGTTTTTCAACTTTATCTCTCAGCTAATGGTTT 1359 Query 1535 TCATTTGGGTTTTATACATTCTTATCACATCAGAATCAGGCGGTGTGACTGAGCAAGTCA 1594 |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct 1360 TCATTTGGGTTTTATACATTCTAATCACATCAGAATCAGGTGGTGTGACTGAGCAAGTCA 1419 Query 1595 TGAACATGCTCCCGATCAACGCAAGCGCTAGAAACAGATGTGTCGAAGTCTTAGACTTAG 1654 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct 1420 TGAACATGCTCCCGATCAACGCAAGTGCTAGAAACAGATGTGTCGAAGTCCTAGACTTAG 1479 Query 1655 CGATATCCGGCGTGCTTTTAGCAACAGCGGAAATCGCCTTCTTCCAAGGATGTCTCACTT 1714 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1480 CGATCTCCGGCGTGCTTTTAGCAACAGCGGAAATCGCCTTCTTCCAAGGATGTCTCACTT 1539 Query 1715 GGCTATTGTTTAGACTATACAATATACATTTCCTTTACATGTCAACCGTTCTTGCCTTCA 1774 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1540 GGCTATTGTTTAGACTATACAATATACATTTCCTTTACATGTCGACCGTTCTTGCCTTCA 1599 Query 1775 TCAGCGCTCTGTTACCGATTTTCCCTTACTGGTTCGCGACAATCCCAGCGGCTTTGCAGC 1834 |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct 1600 TCAGTGCTCTGTTACCGATTTTCCCTTACTGGTTTGCGACAATCCCAGCGGCTTTGCAAC 1659 Query 1835 TCGTGCTAGAAGGAAGATATATTGTTGCAGTGATTTTATCTGTGACTCATCTTGTGCTAA 1894 | ||||||||||||||||| ||| ||||||| | | |||||||||||||||||||||||| Sbjct 1660 TAGTGCTAGAAGGAAGATACATTATTGCAGTTACTCTATCTGTGACTCATCTTGTGCTAA 1719 Query 1895 TGGAGTATGGTGCTTCAGAGATTCAAGATGACATTCCTGGGTCCAATGCTTACCTTACTG 1954 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1720 TGGAGTATGGTGCTTCAGAGATTCAAGATGACATTCCTGGGTCCAATGCTTACATTACTG 1779 Query 1955 GACTAAGTATTATTGGTGGAGTCACTCTGTTTCCTTCTGCTCTAGAGG 2002 |||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct 1780 GACTAAGTATTATTGGTGGAGTGACTCTGTTTCCTTCTGCTCTCGAGG 1827 Score = 1118 bits (605), Expect = 0.0 Identities = 668/697 (96%), Gaps = 9/697 (1%) Strand=Plus/Plus Query 139 AGAGA-TTGATCGATGGAATTGGTCCCGTACGATTCGGAGACGAAATCATCGATCCCCAC 197 ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8 AGAGATTTGATTGATGGAATTGGTCCCGTACGATTCGGAGACGAAATCATCGATCCCCAC 67 Query 198 AAATCTCGCGTGGCAAGAGATGTTTCGTTCCGCTTCATCTCGTAAACCTCAAGACCCTCC 257 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 68 AAATCTCGCGTGGCAAGAGATGTTTCGTTCCGCTTCATCGCGTAAACCTCAAGACCCTCC 127 Query 258 GTCTTCTTCTTCTTCATCGCCACCGCGTAAACCTTCCGGCGATGGATCATCAA--G-CAA 314 |||||||||||| ||||||||||||||||||||||||||||||||||||| | ||| Sbjct 128 GTCTTCTTCTTC---ATCGCCACCGCGTAAACCTTCCGGCGATGGATCATCATCCGGCAA 184 Query 315 AACATCTTTATCAACCGTTGATTCCCAAGCCCGTCTCGCTATGTACATAGCAATGGCTCA 374 ||||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||||| Sbjct 185 AACATCTTTATCAACCGCTGATTCACAAGCACGTCTCGCTATGTACATAGCAATGGCTCA 244 Query 375 CGCTGGTCTCGCTTTCGCCATTTGTGTTCTGTATTTCGTCGGAAAGCTATTACAAGAGTA 434 ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 245 CGCTGGTCTCGTTTTCGCCATTTGTGTTCTGTATTTCGTTGGAAAGCTATTACAAGAGTA 304 Query 435 TCTAAGACCGATTCAATGGGCGATTCTCTGTTCGATTCCTTTACGAGGTATTCAAGAAAC 494 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 305 TCTAAGACCGATTCAATGGGCGATTCTCTGTTCGATTCCGTTACGAGGTATTCAAGAAAC 364 Query 495 CCTTGTTGATTTCTGGAGCGAGCCTTTGAAATTAGGGCTTACGGAAGTTGTTCTCGCTGT 554 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 365 CCTTGTTGATTTCTGGAGCGAGCCTTTGAAATTAGGGCTAACGGAAGTTGTTCTCGCTGT 424 Query 555 TCCTGTTTCTGTCTTCAATGTTTTCATCGGGTCGATTGTGGATATTAAAAA-CGTCTGCT 613 |||||||||||||||||||||||||||||| || ||||||||||||||||| | |||||| Sbjct 425 TCCTGTTTCTGTCTTCAATGTTTTCATCGGATCCATTGTGGATATTAAAAATC-TCTGCT 483 Query 614 TTAGGGTTTTTCTTAGGAGATCGAAACCTAAGAGAACGAGGAAGAAGAACGATACTGGGT 673 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 484 TTAGGGTTTTTCTTAGGAGATCGAAACCTAAGAGAACGAGGAAGAAGAACGGTACTGGGT 543 Query 674 TTTCTAAACTGGTTAAATGGTTAGTCTCTTTTGGTGTCTTTGTCATTGCTTATGAGAGGA 733 |||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 544 TTTCCAAATTGGTTAGATGGTTAGTCTCTTTTGGTGTCTTTGTCATTGCTTATGAGAGGA 603 Query 734 TTGGTGGAATTGGGTCTCTTGTCATTCTCTCTTTAGGGTTTTTGTTTAGTTCCAAGAATG 793 |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 604 TTGGGGGAATTGGGTCTCTTGTGATTCTCTCTTTAGGGTTTTTGTTTAGTTCCAAGAATG 663 Query 794 TTGATTCGTCTCTCTCTGCGGTCTCTTCTCTGAGGAG 830 | |||||||||||||||||||| |||||||||||||| Sbjct 664 TCGATTCGTCTCTCTCTGCGGTTTCTTCTCTGAGGAG 700 > Ahg917283 jgi|Araly1|917283|Al_scaffold_0008_2034 Length=906 Score = 710 bits (384), Expect = 0.0 Identities = 429/451 (95%), Gaps = 2/451 (0%) Strand=Plus/Plus Query 1648 GACTTAGCGATATCCGGCGTGCTTTTAGCAACAGCGGAAATCGCCTTCTTCCAAGGATGT 1707 ||||||||||| |||| ||||||||||||||||||| |||| |||||||||||||||||| Sbjct 457 GACTTAGCGATCTCCGACGTGCTTTTAGCAACAGCGAAAATTGCCTTCTTCCAAGGATGT 516 Query 1708 CTCACTTGGCTATTGTTTAGACTATACAATATACATTTCCTTTACATGTCAACCGTTCTT 1767 |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct 517 CTCACTTGGCTATTATTTAGACTATACAATATACATTTCCTTTATATGTCAACCGTTCTC 576 Query 1768 GCCTTCATCAGCGCTCTGTTACCGATTTTCCCTTACTGGTTCGCGACAATCCCAGCGGCT 1827 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 577 GCCTTCATCAGCGCTCTGTTACCGATTTTCCCTTACTGGTTCGCGACAATCCCAGCGGCT 636 Query 1828 TTGCA-GCTCGTGCTAGAAGGAAGATATATTGTTGCAGTGATTTTATCTGTGACTCATCT 1886 ||||| | ||||||||||||||||||| ||||||||||| | | |||||||||||||||| Sbjct 637 TTGCAAG-TCGTGCTAGAAGGAAGATACATTGTTGCAGTAACTCTATCTGTGACTCATCT 695 Query 1887 TGTGCTAATGGAGTATGGTGCTTCAGAGATTCAAGATGACATTCCTGGGTCCAATGCTTA 1946 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 696 TGTGCTAATGGAGTATGGTGCTTCAGAGATTCAAGATGACATTCCAGGGTCCAATGCTTA 755 Query 1947 CCTTACTGGACTAAGTATTATTGGTGGAGTCACTCTGTTTCCTTCTGCTCTAGAGGGAGC 2006 | |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct 756 CATTACTGGACTAAGTATTATTGGTGGAGTGACTCTGTTTCCTTCTGCTCTCGAGGGAGC 815 Query 2007 GATAATGGGGCCGTTGATAACGACGGTGGTGATTGCTTTGAAGGATCTGTATGCAGAGTT 2066 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 816 GATAATGGGGCCGTTGATAACAACGGTTGTGATTGCTTTGAAGGATCTGTATGCAGAGTT 875 Query 2067 TGTTCTGAATGAGCCAAAGAAGATCAATTAG 2097 |||||||||||| ||||||||||| | |||| Sbjct 876 TGTTCTGAATGATCCAAAGAAGATTAGTTAG 906 Score = 625 bits (338), Expect = 5e-178 Identities = 378/398 (95%), Gaps = 0/398 (0%) Strand=Plus/Plus Query 1179 GATTAAGCATTTTGTGATCGGGCATCCTCAGAACACGTCGACGCCTTCCACGGCGCTTAT 1238 ||||||||||||||||||||||||||||||||||||||| || || |||||||||||||| Sbjct 60 GATTAAGCATTTTGTGATCGGGCATCCTCAGAACACGTCAACTCCATCCACGGCGCTTAT 119 Query 1239 AACTCCGTCTCCTTATACAGAGAAGCTCATGAGTTTGAGGACTCGGGTTAAGAATCGAGA 1298 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 120 TACTCCGTCTCCTTATACAGAGAAGCTCATGAGTTTGAGGACTCGGGTTAAGAATCGAGA 179 Query 1299 GTGGAGTCAGATATACTCGGAGGTTGATGTGATCTTCAGGGAGCTTATTATCACTAGAGA 1358 ||||||||||| ||||||||||| |||||||| |||||||||||||||||||| ||||| Sbjct 180 ATGGAGTCAGATTTACTCGGAGGTCGATGTGATTTTCAGGGAGCTTATTATCACAAGAGA 239 Query 1359 AGATTTAGTAGAGAAAGCTAAAGGCTTTGCTGTTAAAGGAATGGATGTATCGCAACGGGT 1418 |||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 240 AGATTTGGTGGAGAAAGCTAAAGGCTTTGCTGTTAAAGGAATGGATGTATCGCAAAGGGT 299 Query 1419 TTTCTCGAGCAGCGCATCGGTTGTTGGAGGCGGTGCTAAGTTCGTTTTCTCTATTGGAAA 1478 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 300 TTTCTCAAGCAGCGCATCGGTTGTTGGAGGCGGTGCTAAGTTCGTTTTCTCTATTGGAAA 359 Query 1479 CTTGATAATCTCAGGAGCAGCAGAGTTTTTCAACTTTATCTCTCAGCTAATGATTTTCAT 1538 |||||||||||| |||| ||||||| |||||||||||||||||||||||||| |||| || Sbjct 360 CTTGATAATCTCGGGAGTAGCAGAGATTTTCAACTTTATCTCTCAGCTAATGGTTTTTAT 419 Query 1539 TTGGGTTTTATACATTCTTATCACATCAGAATCAGGCG 1576 |||| ||||||||||||| ||||||||||||||||||| Sbjct 420 TTGGATTTTATACATTCTAATCACATCAGAATCAGGCG 457 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 91264227020 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5