BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G56490.1
Length=1802
Score E
Sequences producing significant alignments: (Bits) Value
Ahg313803 jgi|Araly1|313803|fgenesh1_pm.C_scaffold_1002583 1978 0.0
Ahg917344 jgi|Araly1|917344|Al_scaffold_0008_2095 1844 0.0
Ahg950315 jgi|Araly1|950315|scaffold_802202.1 272 6e-72
> Ahg313803 jgi|Araly1|313803|fgenesh1_pm.C_scaffold_1002583
Length=1911
Score = 1978 bits (1071), Expect = 0.0
Identities = 1478/1676 (88%), Gaps = 22/1676 (1%)
Strand=Plus/Plus
Query 67 TCTTTTGCTTTTTCACATTTGCTTCCTCATCTCCACCGGATGATCCTGTCAACTGTGAAT 126
||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||| |
Sbjct 29 TCTTTTGCTTTTTCACATTTGCTTCCTCAACTCCACCGGATGATCCGGTCAAGTGTG-AG 87
Query 127 TC-GGAAAC-ACAATGTGCACGGTGACGAACTCGTACGGCGCCTTTCCTGACCGCTCTAT 184
|| |||||| || |||||||| ||||||||||||||||| ||||| || ||||| |||||
Sbjct 88 TCAGGAAACAAC-ATGTGCACTGTGACGAACTCGTACGGAGCCTTCCCCGACCGTTCTAT 146
Query 185 ATGCAAAGCAGCAAAGGTGGAGTACCC-AAGGACGGAGGCTGAGCTGGTCTCTATAGTGG 243
||| |||| ||||||||||||||||| || ||| ||||||||| | |||||||||||||
Sbjct 147 ATGTGAAGCGGCAAAGGTGGAGTACCCTAA-GACCGAGGCTGAGTTAGTCTCTATAGTGG 205
Query 244 CTGCAGCCACTAGAGCCGGCCAAAAAATGCGGGTCGTGACTAGGTACTCTCACAGCTTCC 303
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 206 CTGCAGCCACTAGAGCCGGCCAAAAAATGCGGGTCGTGACTCGGTACTCTCACAGCATCC 265
Query 304 CCAAGCTGGTTTGTACTGATGGTAAAG-ACGGGACTCTCATAAGCACCAAGTTTCTAAAC 362
| ||||| ||||| ||||| || |||| ||||| ||||||||||||||||||| |||||
Sbjct 266 CAAAGCTCGTTTGCACTGACGG-AAAGGACGGGGTTCTCATAAGCACCAAGTTTTTAAAC 324
Query 363 CATGTGGTGACCACCAACCCGGAGGCCAAGACTTTGACGGTTGAGAGCGGCGTGACTCTA 422
| |||||| |||||||| || |||||||||||||| ||||||||||||||||| |||
Sbjct 325 AACGTGGTGGGAACCAACCCCGAAGCCAAGACTTTGACAGTTGAGAGCGGCGTGACGCTA 384
Query 423 AGGCAACTGATCGAAGAAGCAGCTAAGTTTGATCTGGCTTTGCCATACGCACCGTATTGG 482
||||| ||||||| |||||| ||| |||| || || ||||| ||||||||||||||||||
Sbjct 385 AGGCAGCTGATCGGAGAAGCCGCTGAGTTGGAGCTCGCTTTACCATACGCACCGTATTGG 444
Query 483 TGGGGACTTACGGTTGGAGGAATGATGGGGACAGGTGCTCACGGAAGTTCTTTATGGGGT 542
|||||||| |||||||||||| |||||||||| |||||||||||||| || || ||||||
Sbjct 445 TGGGGACTCACGGTTGGAGGATTGATGGGGACGGGTGCTCACGGAAGCTCGTTGTGGGGT 504
Query 543 AAAGGAAGTGCGGTTCATGATTACGTGACCGAGATAAGATTGGTGAGTCCCGGTTTGGCT 602
||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||
Sbjct 505 AAAGGAAGTGCGGTTCATGATTATGTGAGCGAGATAAGAATGGTGAGTCCCGGTTTGGCT 564
Query 603 TCTGATGGGTATGTAAAGGTTCAGGTTCTTAGCGAGACTATAGATCCGGAGGAATTTCGC 662
|||||||||||||||||||||| |||||||||||||||||| ||||| || |||||| |
Sbjct 565 TCTGATGGGTATGTAAAGGTTCGGGTTCTTAGCGAGACTATGGATCCTGATGAATTTTGT 624
Query 663 GCAGCCAAAGTTTCTCTAGGTGTTCTTGGTGTTATCTCTCAAGTAACTTTCGAATTGCAA 722
|| ||||||||||||||||| ||||| |||||||||||||||||||||||| | ||||||
Sbjct 625 GCGGCCAAAGTTTCTCTAGGCGTTCTAGGTGTTATCTCTCAAGTAACTTTCCAGTTGCAA 684
Query 723 CCAATGTTCAAAAGATCGTTAAATTATGTTATG-AGAAACGATTCGGATTTCGGAGATCA 781
|| |||||||| |||||||| | ||||||||| | ||||||||||||||||||||||||
Sbjct 685 CCGATGTTCAAGAGATCGTTGACGTATGTTATGCA-AAACGATTCGGATTTCGGAGATCA 743
Query 782 AGCAGTGAGTTTTGGCGAAAGACACGAGTTTGCGGATTTCTTATGGTTACCGAGCCAAGG 841
||| |||| |||||| |||| ||| |||||||| ||||||||||||||||||||||||||
Sbjct 744 AGCCGTGACTTTTGGGGAAAAACATGAGTTTGCAGATTTCTTATGGTTACCGAGCCAAGG 803
Query 842 AAAAGTGGTGTATCGCATGGATGGCCGAGTTCCGCTTAATACTTCGGG-AGATGGCTTGT 900
|| ||||||||||| ||||| | ||||||||| || || ||||| || | |||||||||
Sbjct 804 CAAGGTGGTGTATCGAATGGACGACCGAGTTCCTCTCAACACTTCAGGCA-ATGGCTTGT 862
Query 901 TCGAATTTTTCCCATTCCGTTCACAACTCTCTTTAGTGTTAGCCATAGAT-AGATCCTTA 959
|||| ||||||||||||||| ||||||||||| ||| ||||||||| || |||||||||
Sbjct 863 TCGACTTTTTCCCATTCCGTCCACAACTCTCTGTAGCGTTAGCCATC-ATTAGATCCTTA 921
Query 960 GAGGAGAGTGAAGAGTCA-CTTGAAGATGCAAACATGAAGTGTGTGAGGGCAAAGCTAGT 1018
|||||||||||||||||| | || |||||||||| |||||||||||| ||| ||| | |
Sbjct 922 GAGGAGAGTGAAGAGTCATCCGGA-GATGCAAACAAGAAGTGTGTGAGAGCAGAGCAATT 980
Query 1019 ATCGTCGTCTATGTTTTTAATGTCATACGGTGTGACTAATAACGGCCTA-ATATTCACAG 1077
|||||||| | |||||| ||| ||||||||||||||||| || || | | ||||||||
Sbjct 981 ATCGTCGTTTTTGTTTTCAATCTCATACGGTGTGACTAACAATGGTATGGA-ATTCACAG 1039
Query 1078 GCTATCCGGTCATCGGAATGCAAAACCATATGATGTCGTCAGGTTCATGTCTAGACAGTC 1137
|||||||||| ||||||| |||||||| |||||||||||| ||| ||||||||||||| |
Sbjct 1040 GCTATCCGGTAATCGGAAAGCAAAACCGTATGATGTCGTCGGGTACATGTCTAGACAGCC 1099
Query 1138 GTCAAGACGGACTAATCACGGCTTGTCCATGGGATCCACGGATAAAAGGCCAATTCTTTC 1197
| |||||||| ||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct 1100 ATTGGGACGGACTGATCACTTCTTGTCCGTGGGATCCACGGATAAAAGGCCAATTCTTTC 1159
Query 1198 ACCAAACAACATTCAGTGTTTCTCTCACAAATGTCAAAAGTTTCATCAACGACATCAAAG 1257
|||||||| ||||||||||| | |||||| ||||||| |||||||| ||||||||||||
Sbjct 1160 ACCAAACAGCATTCAGTGTTCCACTCACACGTGTCAAAGGTTTCATCGACGACATCAAAG 1219
Query 1258 CACTTGTGAAGATCGAACCGAAATCTTTATGCGTACTTGAAGGCAGCAACGGTATTCTCA 1317
|||| || ||||| ||||||||| || | ||||| |||||| ||||||| ||||||||||
Sbjct 1220 CACTCGTAAAGATTGAACCGAAAGCTCTCTGCGTCCTTGAACGCAGCAATGGTATTCTCA 1279
Query 1318 TCCGCTATGTCACATCCTCTC-TAGCATTTCTCGGAAAAGAAGAAAAAGCTTTAGATTTT 1376
|||| |||||||||||||||| | || ||||| || ||||| |||||||||||||| |||
Sbjct 1280 TCCGTTATGTCACATCCTCTCCT-GCTTTTCTTGGGAAAGAGGAAAAAGCTTTAGACTTT 1338
Query 1377 GACCTAACTTACTACAGAAGCAAAAATGATCCATTGGCACCGCGTCTATACGAGGATTAC 1436
||||||||||||||| |||||||| ||||||| ||| |||||||||| |||||||||| |
Sbjct 1339 GACCTAACTTACTACCGAAGCAAAGATGATCCCTTGACACCGCGTCTCTACGAGGATTTC 1398
Query 1437 ATTGAAGAAATCGAGCAAATGGCGATATTCAAATACAATGCGTTACCACATTGGGGGAAG 1496
|| ||||||||||| |||||||||||||| |||||||| ||| | |||||||||||||||
Sbjct 1399 ATCGAAGAAATCGAACAAATGGCGATATTTAAATACAACGCGCTGCCACATTGGGGGAAG 1458
Query 1497 AATAGGAACCTAGCGTTTGATGGTGCCATTAGAAAATACAAGAACGCAAACGCGTTTTTA 1556
|||||||||||||| |||||||| || |||||||| |||||||||||||||||||||||
Sbjct 1459 AATAGGAACCTAGCTTTTGATGGCGCGATTAGAAAGTACAAGAACGCAAACGCGTTTTTG 1518
Query 1557 AAAGTAAAAGAGAAATTTGATTCTTTAGGATTGTTTTCCACTGAATGGACTGATCAGATT 1616
||||||||||||| ||||||| | ||||| ||||||| || |||||||| ||||| |||
Sbjct 1519 AAAGTAAAAGAGAGATTTGATCCATTAGGGCTGTTTTCGACAGAATGGACCGATCAAATT 1578
Query 1617 CTAGGTTTAAAAGGAAACGTGACGATTGTGAAACAAGGATGTGCA-TTGGAGGGACTATG 1675
|||||||||||||||||||| |||||||||||| ||||||||||| ||| ||| ||| ||
Sbjct 1579 CTAGGTTTAAAAGGAAACGTTACGATTGTGAAAGAAGGATGTGCACTTGAAGG-ACTGTG 1637
Query 1676 TATTTGTTCAGAGGATTCTCATTGTGCTCCTACCAAAGGTTATTTATGTAGACCAG 1731
| ||||||| || ||| ||||||||||||| | |||||||||||| ||| ||||||
Sbjct 1638 TGTTTGTTCGGATGATGCTCATTGTGCTCCCAACAAAGGTTATTTGTGTCGACCAG 1693
> Ahg917344 jgi|Araly1|917344|Al_scaffold_0008_2095
Length=1737
Score = 1844 bits (998), Expect = 0.0
Identities = 1500/1741 (86%), Gaps = 40/1741 (2%)
Strand=Plus/Plus
Query 51 TTTTGGCTAAGTTTGATCTTTTGCTTTTTCACATTTGCTTCCTC-ATCTCCACCGGATGA 109
|||||||| |||||||||||||| |||||||||||||||||||| | |||| || ||||
Sbjct 7 TTTTGGCTCAGTTTGATCTTTTGTTTTTTCACATTTGCTTCCTCGA-CTCCTCCCCATGA 65
Query 110 TCCTGTCAACTGTGAATTCGGAAACACAATGTGCACGGTGACGAACTCGTACGGCGCCTT 169
||||||||| || || | |||||||||| | ||||||||||||||||||||||| |||||
Sbjct 66 TCCTGTCAAGTGCGAGTCCGGAAACACAGTATGCACGGTGACGAACTCGTACGGAGCCTT 125
Query 170 TCCTGACCGCTCTATATGCAAAGCAGCAAAGGTGGAGTACCCAAGGACGGAGGCTGAGCT 229
||| ||||| ||| |||| |||||||||||||||||||||||| ||| |||||||||||
Sbjct 126 TCCCGACCGTTCTTTATGTGAAGCAGCAAAGGTGGAGTACCCAAAGACCGAGGCTGAGCT 185
Query 230 GGTCTCTATAGTGGCTGCAGCCACTAGAGCCGGCCAAAAAATGCGGGTCGTGACTAGGTA 289
||||||| | || |||||||| |||| |||||| ||||||||||||||||||||| ||||
Sbjct 186 GGTCTCTGTGGTTGCTGCAGCAACTAAAGCCGGTCAAAAAATGCGGGTCGTGACTCGGTA 245
Query 290 CTCTCACAGCTTCCCCAAGCTGGTTTGTACTGATGGTAAAGACGGGACTCTCATAAGCAC 349
|||||| ||| |||| ||| ||||||| |||||||| |||||||||| ||||||||||||
Sbjct 246 CTCTCATAGCATCCCAAAGTTGGTTTGCACTGATGGCAAAGACGGGATTCTCATAAGCAC 305
Query 350 CAAGTTTCTAAACCATGTGGTGAC-CACCAACCCGGAGGCCAAGACTTTGACGGTTGAGA 408
|||||||||| |||| |||||| | ||||||||||| ||||||||||||||||||||||
Sbjct 306 CAAGTTTCTAGACCACGTGGTG-CGAACCAACCCGGATGCCAAGACTTTGACGGTTGAGA 364
Query 409 GCGGCGTGACTCTAAGGCAACTGATCGAAGAAGCAGCTAAGTTTGATCTGGCTTTGCCAT 468
|||||||||| |||||||| ||||||||||||| |||||||| || || ||||||||||
Sbjct 365 GCGGCGTGACGCTAAGGCAGTTGATCGAAGAAGCGGCTAAGTTGGAGCTAGCTTTGCCAT 424
Query 469 ACGCACCGTATTGGTGGGGACTTACGGTTGGAGGAATGATGGGGACAGGTGCTCACGGAA 528
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 425 ACGCACCTTATTGGTGGGGACTTACTGTTGGAGGAATGATGGGGACAGGTGCTCACGGAA 484
Query 529 GTTCTTTATGGGGTAAAGGAAGTGCGGTTCATGATTACGTGACCGAGATAAGATTGGTGA 588
|||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 485 GTTCATTGTGGGGTAAAGGAAGTGCGGTTCATGATTACGTGACCGAGATAAGAATGGTGA 544
Query 589 GTCCCGGTTTGGCTTCTGATGGGTATGT-AAAGGTTCAGGTTCTTAGCGAGACTATAG-A 646
||||||||| || |||||| |||||||| ||| |||| || |||||| ||| ||| | |
Sbjct 545 GTCCCGGTTCGGTTTCTGAAGGGTATGTGAAA-GTTCGGGATCTTAGTGAGGTTAT-GAA 602
Query 647 TCCGGAGGAATTTCGCGCAGCCAAAGTTTCTCTAGGTGTTCTTGGTGTTATCTCTCAAGT 706
||| || |||||| ||||||||||||||| |||| |||||||||||||||||||| ||
Sbjct 603 TCCTGAAGAATTTAATGCAGCCAAAGTTTCTTTAGGCGTTCTTGGTGTTATCTCTCAGGT 662
Query 707 AACTTTCGAA-TTGCAACCAATGTTCAAAAGATCGTTAAATTATGTTATGAGAAACGATT 765
||||||| || ||||||| |||||||| |||||||||| |||| |||| ||| |||
Sbjct 663 AACTTTC-AAGCTGCAACCGATGTTCAAGAGATCGTTAACGTATGAGATGAAAAATGATA 721
Query 766 CGGATTTCGGAGATCAAGCAGTGAGTTTTGGCGAAAGACACGAGTTTGCGGATTTCTTAT 825
||||||||||||||||||| |||| ||| || |||| ||| ||||||||||||||| |||
Sbjct 722 CGGATTTCGGAGATCAAGCCGTGACTTTCGGGGAAAAACATGAGTTTGCGGATTTCCTAT 781
Query 826 GGTTACCGAGCCAAGGAAAAGTGGTGTATCGCATGGATGGCCGAGTTCC-GCTTAATACT 884
||||||| |||||||| |||||||||||||| || |||| || ||||| || || |
Sbjct 782 GGTTACCAAGCCAAGGCAAAGTGGTGTATCGAATTGATGATCGCGTTCCTGC-CAACGTT 840
Query 885 TC-GGGAGATGGCTTGTTCGAA-TTTTTCCCATTCCGTTCACAACTCTCTTTAG-TGTTA 941
|| || | ||||||||||| || ||||||||||||||||||||||||||| | | || ||
Sbjct 841 TCAGGCA-ATGGCTTGTTC-AATTTTTTCCCATTCCGTTCACAACTCTCTGTGGCTG-TA 897
Query 942 GCCAT-AGATAGATCCTTAGAGGAGAGTGAAGAGTCACT-TGAAGATGCAAACATGAAGT 999
||||| || |||||| ||||||||| ||| ||||| | | || ||||||| |||||
Sbjct 898 GCCATCAG-CAGATCCATAGAGGAGAATGAGGAGTC-GTCGGGTGAGGCAAACAAGAAGT 955
Query 1000 GTGTGAGGGCAAAGCTAGTATCGTCGTCTATGTTTTTAATGTCATACGGTGTGACTAATA 1059
||||||| ||||||| | || | || | | ||||| | || |||||||||||||| ||||
Sbjct 956 GTGTGAGAGCAAAGCGACTAGCATCATTTTTGTTTGTCATCTCATACGGTGTGACCAATA 1015
Query 1060 ACGGCCTAATATTCACAGGCTATCCGGTCATCGGAATG-CAAAACC-ATATGATGTCGTC 1117
| ||| | ||||||||||||||||| || ||||||| | ||| ||| | |||||||||||
Sbjct 1016 ATGGCGTTATATTCACAGGCTATCCCGTTATCGGAA-GCCAAGACCGA-ATGATGTCGTC 1073
Query 1118 AGGTTCATGTCTAGACAGTCGTCAAG-ACGGACTAATCACGGCTTGTCCATGGGATCCAC 1176
||| ||||||||||||||| || | ||||| | || || ||||||| ||||||||||
Sbjct 1074 CGGTGCATGTCTAGACAGTCATC-GGAACGGATTGATTACATCTTGTCCTTGGGATCCAC 1132
Query 1177 GGATAAAAGGCCAATTCTTTC-ACCAAACAACATTCAGTGTTTCTCTCACAAATGTCAAA 1235
| || | |||| | || |||| |||||||| |||| |||||| |||||||| ||||| ||
Sbjct 1133 GCATTAGAGGCGAGTT-TTTCTACCAAACAGCATTAAGTGTTCCTCTCACACATGTC-AA 1190
Query 1236 AG-TTTCATCAACGACATCAAAGCACTTGTGAAGATCGAACCGAAATCTTTATGCGTACT 1294
|| ||||||||||||||||||||||||||||||||| ||||| |||||| | |||| ||
Sbjct 1191 AGATTTCATCAACGACATCAAAGCACTTGTGAAGATTGAACCAAAATCTCTCTGCGGCCT 1250
Query 1295 TGAAGGCAGCAACGGTATTCTCATCCGCTATGTCACATCCTCT-CTAGCATT-TCTCGGA 1352
|||| || | | ||| |||| ||||| ||||||||||||||| || || || ||| ||
Sbjct 1251 TGAACTCAACTATGGTGTTCTAATCCGTTATGTCACATCCTCTCCT-GC-TTATCTAGGG 1308
Query 1353 AAAGAAG-AAAAAGCTTTAGATTTTGACCTAACTTACTACAGAAGCAAAAATGATCCATT 1411
||||||| |||||| |||||| ||||||||||||||||||||||||||| ||||||| ||
Sbjct 1309 AAAGAAGAAAAAAG-TTTAGACTTTGACCTAACTTACTACAGAAGCAAAGATGATCCTTT 1367
Query 1412 GGCACCGCGTCTATACGAGGATTACATTGAAGAAATCGAGCAAATGGCGATATTCAAATA 1471
| |||| ||||| |||||||||||||| ||||| |||||||||||||| ||| | |||||
Sbjct 1368 GACACCACGTCTCTACGAGGATTACATGGAAGAGATCGAGCAAATGGCAATACTGAAATA 1427
Query 1472 CAATGCGTTACCACATTGGGGGAAGAATAGGAACCTAGCGTTTGATGGTGCCATTAGAAA 1531
||| ||||| || ||||||||||| || ||||||||||| ||||||||||||||||||||
Sbjct 1428 CAACGCGTTGCCTCATTGGGGGAAAAACAGGAACCTAGCATTTGATGGTGCCATTAGAAA 1487
Query 1532 ATACAAGAACGCAAACGCGTTTTTAAAAGTAAAAGAGAAATTTGATTCTTTAGGATTGTT 1591
||||||||||||||||||||||| ||||| || || | ||| ||| | | |||||||
Sbjct 1488 TTACAAGAACGCAAACGCGTTTTTGAAAGTCAAGGATAGATTAGATCCGTCCCGATTGTT 1547
Query 1592 TTCCACTGAATGGACTGATCAGATTCTAGGTTTAAAAGGAAACGTGACGATTGTGAAACA 1651
||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1548 TTCTACAGAATGGACCGATCAGATTCTAGGTTTAAAAGGAAACGTGACGATTGTGAAACA 1607
Query 1652 AGGATGTGCATTGGA-GGGACTATGTATTTGTTCAGAGGATTCTCATTGTGCTCCTACCA 1710
||||||||||||||| ||| || ||||||||||| |||||||||||||||||||| | ||
Sbjct 1608 AGGATGTGCATTGGAAGGG-CTTTGTATTTGTTCGGAGGATTCTCATTGTGCTCCAAACA 1666
Query 1711 AAGGTTATTTATGTAGACCAGGTAAAGTTTATAGAGAAGCTAGAGTTTGTACTCGTGTAA 1770
|||||||| | ||| |||| ||||||||||||||||||||||| |||||||||| |||||
Sbjct 1667 AAGGTTATATGTGTCGACCTGGTAAAGTTTATAGAGAAGCTAGGGTTTGTACTCTTGTAA 1726
Query 1771 G 1771
|
Sbjct 1727 G 1727
> Ahg950315 jgi|Araly1|950315|scaffold_802202.1
Length=223
Score = 272 bits (147), Expect = 6e-72
Identities = 170/181 (94%), Gaps = 2/181 (1%)
Strand=Plus/Plus
Query 565 ACGTGACCGAGATAAGATTGGTGAGTCCCGGTTTGGCTTCTGATGGGTATGTAAAGGTTC 624
||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||
Sbjct 4 ACGTGACCGAGATAAGAATGGTGACTCCTGGTTTGGCTTCTGATGGGTATGTAAAGGTTC 63
Query 625 AGG-TTCTTAGCGAGACTATAGATCCGGAGGAATTTCGCGCAGCCAAAGTTTCTCTAGGT 683
|| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct 64 -GGTTTCTTAGCGAGACTATAGATCCCGAGGAATTTCACGCAGCCAAAGTTTCTCTAGGC 122
Query 684 GTTCTTGGTGTTATCTCTCAAGTAACTTTCGAATTGCAACCAATGTTCAAAAGATCGTTA 743
|||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct 123 GTTCTTGGGGTTATCTCTCAAGTAACTTTCGAATTGCAACCGATGTTCAAGAGATCGTTA 182
Query 744 A 744
|
Sbjct 183 A 183
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 67648275120
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5