BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G56890.1
Length=3732
Score E
Sequences producing significant alignments: (Bits) Value
Ahg495779 jgi|Araly1|495779|fgenesh2_kg.8__1595__AT5G56890.1 5343 0.0
> Ahg495779 jgi|Araly1|495779|fgenesh2_kg.8__1595__AT5G56890.1
Length=3673
Score = 5343 bits (2893), Expect = 0.0
Identities = 3470/3738 (93%), Gaps = 81/3738 (2%)
Strand=Plus/Plus
Query 3 TCTTCTTCTGCCACTTCGATTGCTTTAAACTTGGAGATTAAGATTACACATCAAATAATT 62
|||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct 1 TCTTCTTCTGCCACTTCGATTGCTTTAAACTTGGAGCTTAAGATTACACATC----AATT 56
Query 63 CTTCTTTGTCTTCCTCGTGATCATCGAGGAAGCTTGATCTCTTCTATGGAATGGAGAATT 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 57 CTTCTTTGTCTTCCTCGTGATCATCGAGGAAGCTTGATCTCTTCTATGGAATGGAGATTT 116
Query 123 TGACTCTCCTCCTTAGGATCTGTCTTGTTTCGTCGGTTTTAGTTGCT-G--CTTCTTCCT 179
||| |||||||||| ||||||||||| |||||||||||||||||| | | |||||||||
Sbjct 117 TGATTCTCCTCCTTTGGATCTGTCTTCTTTCGTCGGTTTTAGTTGTTGGTTCTTCTTCCT 176
Query 180 CAGGATCGGAATTGTTATCTCCGTTATCATCACCACCGTCTCCATTACCCGAAACTTCAA 239
| |||| ||| |||||| |||||||||||||||||||||||||| |||| ||||||| ||
Sbjct 177 CTGGATTGGATTTGTTACCTCCGTTATCATCACCACCGTCTCCACTACCGGAAACTTTAA 236
Query 240 AAGGGTTTGGTCAAGCACCGAGTAATTCACCTGAATCTCACAAATCCGACAATGTGCCAC 299
||||||||||||||||||||||| ||||| | | | |||||| ||||||||| |
Sbjct 237 AAGGGTTTGGTCAAGCACCGAGTCATTCA-C----T-T---GAATCCGGCAATGTGCCGC 287
Query 300 CGTCTAAAGCTTCTTCTCAACCGTCTCTTCCTCCTTTAGCTGATTTGGCAGCTCCACCAC 359
||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct 288 CGTCTAAAG---CTTCTCAACCGTCTCTTCCTCCTTTAGCTGATGTGGCAGCTCCACCGC 344
Query 360 CGTCAGATTCCGTCGGAGGTAAAGCACCGGCCGGTGTGCCTGTTGTCTTTGTTCCTAATG 419
|||||||||||| ||||||||| |||||||||||||||||| ||||||| ||||||||||
Sbjct 345 CGTCAGATTCCGCCGGAGGTAATGCACCGGCCGGTGTGCCTTTTGTCTTGGTTCCTAATG 404
Query 420 CTCCAGCTCCAGCTA-CAATACCCGTTAAGGATTTGCCCGTAGCTTCGCCTCCGGTTCTT 478
||||||||||||| | |||||||||| ||||||||||||| | |||||||||||| ||
Sbjct 405 CTCCAGCTCCAGC-AGCAATACCCGTGAAGGATTTGCCCGGAACTTCGCCTCCGG---TT 460
Query 479 CAACCCATTACACCGATTGCTTCACCACCTCGATTCATTCCAGGAGATGCACCAAAGGAG 538
||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||
Sbjct 461 CAACCCATTACACCGGTTGCTTCACCACCTCAATTCGTTCCAGGAGATGCACCAAAGGAG 520
Query 539 CCTCCTTTCTCAGGAAGAGTTACTCCAGCCCCGGTTTCATCACCTGTTTCGGATATTCCT 598
|||||||||||||||||||||||||| | ||| ||||||| ||||||||||||||||||
Sbjct 521 CCTCCTTTCTCAGGAAGAGTTACTCCGGGCCCAATTTCATCCCCTGTTTCGGATATTCCT 580
Query 599 CCAATTCCATCAGTGGCTCTGCCTCCGCCTACACCGAGCAATGTACCTCCTAGAAATGCT 658
|||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct 581 CCAATTCCATCAGTGGCTCTATCTCCGCCTACACCGAGCATTGTACCTCCTAGAAATGCT 640
Query 659 TCTAACAATCACAAGCCTCCTCCTATCGAAAAGTCTATTGCTCCTGTTGCATCACCACCA 718
||||||||||||||| ||||||||||||||| ||| ||||||||||||||| ||||||
Sbjct 641 TCTAACAATCACAAG---CCTCCTATCGAAAAGCCTAGTGCTCCTGTTGCATCTCCACCA 697
Query 719 ACAATATCAATTGACATTGCACCACCAGTACATCCCGTCATACCTAAGTTAACACCCTCG 778
||||||| ||||||||| |||| ||||| |||||||||||||| ||||||||||||||
Sbjct 698 ACAATATTTATTGACATTTCACCGCCAGTCCATCCCGTCATACCCAAGTTAACACCCTCT 757
Query 779 AGCTCACCTGTACCTACCTCGACTCCAACTAAGGGATCTCCGAGAAGAAATCCGCCAACT 838
|| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 758 AGTTCACCTGTACCCACCTCGACTCCAACTAAGGGATCTCCAAGAAGAAATCCGCCAACT 817
Query 839 ACCCACCCAGTTTTCCCCATAGAATCTCCTGCTGTCTCACCAGATCATGCTGCAAATCCA 898
|| |||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 818 ACGCACCCAGTATTCCCCATAGAATCTCCTGCCGTCTCACCAGATCCTGCTGCAAATCCA 877
Query 899 GTAAAACATCCGCCCCCCAGCGATAACGGAGATGATAGTAAAAGTCCGGGTGCTGCACCG 958
||||||||||| || ||||| ||||| |||||||||| ||||||||||||||||||||
Sbjct 878 GTAAAACATCCACCACCCAGTGATAATGGAGATGATAACAAAAGTCCGGGTGCTGCACCT 937
Query 959 GCAAATGAAACTGCTAAACCCTTACCTGTCTTCCCACATAAAGCTTCTCCTCCTTCGATT 1018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 938 TCAAATGAAACTGCTAAACCCTTACCTGTCTTCCCACATAAAGCTTCTCCTCCTTCGATA 997
Query 1019 GCTCCCTCAGCCCCAAAATTTAACAGACACTCTCATCATACATCTCCATCTACTACTCCA 1078
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 998 GCTCCCTCAGCCCCAAAATTCAACAGACACTCTCATCATACATCTCCATCTACTACTCCA 1057
Query 1079 CCGCCAGATTCTACTCCTAGTAATGTACACCACCATCCTTCATCACCA--T-CTCCTCCT 1135
||||||||||||||||| |||||||||||| ||||||||||||| || | ||||||||
Sbjct 1058 CCGCCAGATTCTACTCCGCGTAATGTACACCGCCATCCTTCATCATCATCTCCTCCTCCT 1117
Query 1136 CCTCTATCTTCACACCATCAACATCATCAAGAACGAAAGAAAATCGCAGATAGTCCAGCT 1195
||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 1118 CCTCTATCTTCACACCATCAACATCATCAAGAACGAAAGAAAATCACAAATAGTCCAGCT 1177
Query 1196 CCTTCACCACTGCCACCGCATCTCATATCTCCAAAGAAGTCAAACCGTAAAGGTTCAATG 1255
||||| |||| |||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct 1178 CCTTCGCCACCACCACCGCACCTCATATCTCCAAAGAAGTCAAACCGTAAAGGTTTAATG 1237
Query 1256 ACTCCTCCTCCA-CAATCGCACCATGCTCCTTCTCCTCCCATTCCTGATTCTTTGATTTC 1314
|||||||||||| | ||| || ||||||||||||||||||||||||| ||||||||||||
Sbjct 1238 ACTCCTCCTCCATC-ATCACATCATGCTCCTTCTCCTCCCATTCCTGCTTCTTTGATTTC 1296
Query 1315 TCCTGCTCACGCTCCAGTCTCTTTCTCTATGAAACGCATCTCCCCGGC-TCTAGCACCTT 1373
||| |||||||||||| || ||| | ||||| |||||||||||||||| || ||||||||
Sbjct 1297 TCCGGCTCACGCTCCAATCCCTTCCACTATGCAACGCATCTCCCCGGCTTC-AGCACCTT 1355
Query 1374 CTCCAACCCAAGTGTTTCCTCTCAGGTCCTCTTCAAGACCTTCAAAATCTCGGAAATTCC 1433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1356 CTCCAACCCAAGTGTTTCCTCTCAGGTCCTCTTCAAGACCTTCAAAATCTCGGAAATTCC 1415
Query 1434 CTCTAGGTCCACCTCTTCAAGCATTTCCTCCTCCTCCCCCTAATTCAGATTGTTCTTCAA 1493
| || |||||||| |||||||||||||| |||||||||||||||||||||||| ||||||
Sbjct 1416 CACTCGGTCCACCGCTTCAAGCATTTCCCCCTCCTCCCCCTAATTCAGATTGTACTTCAA 1475
Query 1494 CTATTTGTTTGGAACCGTACACAAACACACCTCCGGGATCTCCATGTGGCTGTGTCTGGC 1553
||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1476 CTATTTGCTTGGAACCGTACACAAACACACCTCCAGGATCTCCATGTGGCTGTGTCTGGC 1535
Query 1554 CAATTCAAGTTGAGCTACGCCTTAGCATGGCGCTCTACGACTTCTTCCCAATGGTTTCAG 1613
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1536 CAATTCAGGTTGAGCTACGGCTTAGCATGGCGCTCTACGACTTCTTCCCAATGGTTTCAG 1595
Query 1614 AATTTGCTCGGGAAATCAGCGCCGGAGTTTTCATGAAACAGAGCCAAGTCCGTATAATGG 1673
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1596 AATTTGCTCGAGAAATCAGCGCCGGGGTTTTCATGAAACAGAGCCAAGTCCGTATAATGG 1655
Query 1674 GAGCTAACGCGGCCAGCGAACAACCTGAGAAATCCATTGTTCTAATCGATTTAGTACCGC 1733
||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| ||||
Sbjct 1656 GAGCTAACGCGGCTAGCGAACAACCTGACAAATCCATTGTTCTTATCGATTTAGTCCCGC 1715
Query 1734 TTGGAGATAAATTCGATAACATGACTGCAATGCTGACTTACCAGAGATTCTGGAGTAAAA 1793
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1716 TTGGAGATAAATTCGATAACATGACTGCAATGGTGACTTACCAGAGATTCTGGAGTAAAA 1775
Query 1794 AAGTCTATATAGATGAACCAATCTTTGGCGGATACGACGTGATTTACGTGCGTTATCCTG 1853
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1776 AAGTCTATATAGATGAACCAATCTTTGGCGGATACGATGTGATTTACGTGCGTTATCCTG 1835
Query 1854 GTTTACCCGCTTCCCCGCCAACTTCTGGTATGACCATTATAGATCAAGGACCGTACTCTG 1913
||||||| ||||||||||||||||| ||||||||||||||||||||||| || |||||||
Sbjct 1836 GTTTACCGGCTTCCCCGCCAACTTCCGGTATGACCATTATAGATCAAGGGCCATACTCTG 1895
Query 1914 GTAATAATAACGGAAGGGCGGTCAAACCGCTCGGAGTTGATGTTCCAAGGAAGCCGCGCA 1973
|||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||
Sbjct 1896 GTAATAATAACGGAAGGGCGATCAAACCGCTCGGAGTTGATGTTCCAAAGAAGCCGCACA 1955
Query 1974 AGAAAGAGCTCAATGGTGGAAGTATTGCTGTGATTGTTTTATCCGCAGCTGCTTTTATCG 2033
||||| | ||||||| ||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1956 AGAAAAACCTCAATGCTGGAAGTATTGCTGTGATTGTTTTATCGGCAGCTGCTTTTATCG 2015
Query 2034 GTTTATGTTTCGTTATCGTTTGGTTCTTGGTTTTCCGGCGACAAAGAGATCGACGACGTC 2093
||||||||||| |||| ||||||||||||||||||||||||||||||||| |||| ||||
Sbjct 2016 GTTTATGTTTCATTATTGTTTGGTTCTTGGTTTTCCGGCGACAAAGAGATAGACGGCGTC 2075
Query 2094 TTTCGAAAAGAACACCACTTGCTCGCCCTTCACTGCCTTCCCTCTCGAAACCATCAGGCT 2153
|||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2076 TTTCTAAAAGAGCACCACTTCCTCGCCCTTCACTGCCTTCCCTCTCGAAACCATCAGGCT 2135
Query 2154 CGGCGAGATCTTTAACTGGAAGCCGATTTAGCTCAACTTCATTGTCATTTGAATCCAGCA 2213
||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct 2136 CGGCGAGATCTTTAACTGGAAGCCGGTTTAGCTCAACTTCGTTGTCATTTGAATCCAGCA 2195
Query 2214 TTGCTCCGTTTACTCTCTCTGCAAAGACTTTCACCGCAAGTGAAATAATGAAAGCTACAA 2273
|||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |
Sbjct 2196 TTGCTCCGTTTACTCTCTCTGCAAAGACATTCACCGCAAGCGAAATAATGAAAGCTACTA 2255
Query 2274 ATAACTTTGATGAATCGAGGGTTCTTGGTGAAGGCGGATTTGGACGAGTTTACGAAGGTG 2333
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2256 ATAACTTTGATGAATCGAGGGTTCTTGGTGAAGGCGGATTTGGACGAGTTTATGAAGGTG 2315
Query 2334 TTTTCGATGACGGAACTAAAGTAGCAGTTAAGGTATTGAAGAGAGATGACCAGCAAGGTA 2393
||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2316 TTTTCGATGGCGGAACTAAAGTAGCAGTTAAGGTATTGAAGAGAGATGACCAGCAGGGTA 2375
Query 2394 GCAGGGAGTTCTTAGCCGAAGTGGAAATGCTTAGTCGTCTTCATCACAGAAACCTCGTGA 2453
|| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2376 GCCGAGAGTTCTTGGCCGAAGTGGAAATGCTTAGTCGTCTTCATCACAGAAACCTCGTGA 2435
Query 2454 ATTTAATTGGTATTTGTATCGAAGATCGTAACCGTTCCCTGGTTTATGAACTCATACCAA 2513
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2436 ATTTAATTGGTATTTGTATCGAAGATCGTAACCGTTCCCTTGTTTATGAACTCATACCAA 2495
Query 2514 ATGGCAGCGTTGAATCTCACCTCCACGGGATTGATAAAGCATCTTCGCCTTTAGATTGGG 2573
|||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||
Sbjct 2496 ATGGCAGCGTTGAATCTCACCTCCACGGAATCGATAAAGAATCTTCGCCTTTAGATTGGG 2555
Query 2574 ATGCTCGGTTGAAGATAGCTCTTGGTGCGGCCCGTGGTTTAGCGTATTTACACGAAGACT 2633
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2556 ATGCTCGGTTGAAGATAGCTCTTGGTGCAGCCCGTGGTTTAGCGTATTTACACGAAGACT 2615
Query 2634 CGAGCCCGCGAGTTATACACAGAGACTTCAAGTCCAGCAACATCTTGCTGGAAAACGATT 2693
| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2616 CAAGTCCGCGAGTTATACACAGAGACTTCAAGTCCAGCAACATCTTGCTTGAAAACGATT 2675
Query 2694 TCACACCTAAAGTATCTGACTTTGGATTGGCTCGTAACGCCCTTGATGATGAAGATAACA 2753
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2676 TCACACCTAAAGTCTCGGACTTTGGATTGGCTCGTAACGCCCTTGATGATGAAGATAACA 2735
Query 2754 GACATATATCGACACGCGTTATGGGAACGTTTGGGTATGTGGCACCGGAATACGCAATGA 2813
|||||||||| ||||||||||||||||| |||||||||||||| |||||||| |||||||
Sbjct 2736 GACATATATCAACACGCGTTATGGGAACTTTTGGGTATGTGGCGCCGGAATATGCAATGA 2795
Query 2814 CAGGGCATCTTTTGGTGAAGAGTGATGTGTATAGTTACGGAGTTGTGCTTCTCGAGCTAC 2873
| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2796 CGGGGCATCTTTTGGTGAAGAGTGATGTGTATAGTTACGGAGTTGTGCTTCTGGAGCTAC 2855
Query 2874 TTACAGGGCGGAAACCAGTGGATATGTCTCAACCGCCCGGACAAGAGAACTTAGTTTCAT 2933
||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2856 TTACAGGTCGGAAACCAGTGGATATGTCTCAACCACCCGGACAAGAGAACTTAGTTTCAT 2915
Query 2934 GGACTCGGCCTTTTCTTACGAGTGCAGAAGGGCTTGCAGCTATTATAGATCAGTCTTTAG 2993
|||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2916 GGACTCGGTCTTTTCTTACGAGCACAGAAGGGCTTGCAGCTATTATAGATCAGTCTTTAG 2975
Query 2994 GACCCGAGATCTCATTCGATAGCATAGCTAAAGTCGCGGCAATAGCTTCTATGTGCGTTC 3053
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 2976 GACCCGAGATCTCATTCGATAGCATAGCTAAAGTCGCGGCGATAGCTTCGATGTGCGTTC 3035
Query 3054 AACCAGAAGTATCACACCGTCCTTTCATGGGAGAAGTAGTGCAAGCTTTGAAACTTGTCA 3113
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3036 AACCGGAAGTATCACACCGTCCTTTCATGGGAGAAGTAGTGCAAGCTTTGAAACTTGTCA 3095
Query 3114 GCAACGAATGTGATGAAGCTAAAGAACTCAATTCTTTAACTTCTATCTCTAAAGACGATT 3173
|||||||||| |||||||||||||||||||| ||| ||||||| ||| || |||||||||
Sbjct 3096 GCAACGAATGCGATGAAGCTAAAGAACTCAACTCTGTAACTTCAATCACTCAAGACGATT 3155
Query 3174 TTAGAGATGACACTCAAGCTGAGAGCTCTTGTGGTGACAG-CTCAGCAAGGATGGCTCGG 3232
||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||
Sbjct 3156 TTAGAGATGACACTCAAGCTGAGAGCTCTTGTGGTGA-AGGCTCAGCGAGGATGGCTCGG 3214
Query 3233 TATCCATTGCTACCAAATTACGACTCTGAGCCTGATACAGAGAGAGGATTATCTACATCG 3292
|||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||||
Sbjct 3215 TATCCATTGCTACCGAATTACGACTCTGAGCCTGACACAGAGAGAGGACTATCTACATCG 3274
Query 3293 GAAATGTACACGGGGTCAGGGAGGTTCGAGAGACAGTCTAACTCGGGTCCCTTGACCTCG 3352
||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 3275 GAAATGTACTCGGAGTCAGGGAGGTTTGAGAGACAGTCTAACTCGGGTCCCTTGACCTCA 3334
Query 3353 GGTCGAGGCAAGAGTTTCTGGCAAAAGATGAGGAGATTATCGACCGGAAGCTTGAGTGAG 3412
|||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 3335 GGTCGAGGCAAGAGGTTCTGGCAAAAGATGAGAAGATTATCAACCGGAAGCTTGAGTGAG 3394
Query 3413 CATGGAACACCAACGGTCATGTTACGATCCGGTTCTCGCTAAACAATCTTTTGCCTACAG 3472
||||||||||||||||| |||||||||||||||||||| | | | | |
Sbjct 3395 CATGGAACACCAACGGTGATGTTACGATCCGGTTCTCG-T------T-----G---A-A- 3437
Query 3473 AACACTGAAGAGTTTTTGATTGCCCGTTTAAGTTAAGAGACTGAAAGGAAAGAAGGTGCC 3532
|| || |||| ||| || ||||||||||||||| | | ||||| | | | ||||
Sbjct 3438 AAT--TG--GAGTCTTTAATAGCCCGTTTAAGTTAA-A-A--GAAAGCA--G--G-TGCC 3484
Query 3533 TTCTCCTACAAGCAAAACTCTTTGCCTCATGGAAACCGGTTAAGATAAAACCAGGAGTGA 3592
|| |||||||||||| ||||||||||||||||||||| |||||| |||||| |||| ||
Sbjct 3485 TTGTCCTACAAGCAA--CTCTTTGCCTCATGGAAACCGCTTAAGAGAAAACCGGGAGAGA 3542
Query 3593 TCAT--TTCCCGGTTCAA-AATTTTTAGTTGAATAGATCTGTT-TATCTGAGAAGAAGAA 3648
|||| |||||||||||| |||| |||||||||||||| || ||||| ||||||| |
Sbjct 3543 TCATCATTCCCGGTTCAACAATT---AGTTGAATAGATCT-TTGTATCTTAGAAGAA-A- 3596
Query 3649 ACAAGAGATTCTGTTAAATCTAATTTGAATGTACATATCACGTTTTAAAGTAACAG-G-C 3706
|||||||||||||| |||||||||||||||||||||||| |||||||||||| || | |
Sbjct 3597 -CAAGAGATTCTGTTTAATCTAATTTGAATGTACATATCAAGTTTTAAAGTAAGAGAGGC 3655
Query 3707 TTAAGCATTAAGTATCAT 3724
|||||||||||| |||||
Sbjct 3656 TTAAGCATTAAGCATCAT 3673
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 141003307965
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5