BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G57190.1
Length=1908
Score E
Sequences producing significant alignments: (Bits) Value
Ahg917424 jgi|Araly1|917424|Al_scaffold_0008_2175 2499 0.0
Ahg492220 jgi|Araly1|492220|fgenesh2_kg.7__1653__AT4G25970.1 1807 0.0
Ahg495816 jgi|Araly1|495816|fgenesh2_kg.8__1632__AT5G57190.1 1526 0.0
Ahg359372 jgi|Araly1|359372|fgenesh1_pg.C_scaffold_161000001 1459 0.0
> Ahg917424 jgi|Araly1|917424|Al_scaffold_0008_2175
Length=1863
Score = 2499 bits (1353), Expect = 0.0
Identities = 1496/1565 (96%), Gaps = 9/1565 (1%)
Strand=Plus/Plus
Query 348 GACCAATAGGGTAGCGAGGAACAAAATCATCGGTTATTGTGAGCTTGATATATTCGATTT 407
||| |||||| | | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 294 GACAAATAGGCTCTCAAGGAACAAAATCATCGGTTATTGTGAGCTTGATATATTCGATTT 353
Query 408 TGTAGTGCAGGAACCTGAGTCGACTTGTAAGTCATTTAACTTGTTAGATCCCACATCATC 467
|| ||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||
Sbjct 354 TGCAGTGCAGGAACCTGAGTCGGCGTGTAAGTCATTTGACTTGTTAGATCCCACATCATC 413
Query 468 CAATGTTGTTGGCTCCATTTTCCTTTCTTGCGCTATTGAGGATCCTGTTGAAACTGAGAG 527
||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 414 CAATGTTGTTGGCACCATTTTCCTTTCTTGCGCTATTGAGGATCCTGTTGAAACCGAGAG 473
Query 528 GCGGTTTGCAAAGCGTATCTTGTCCATA---GT---GGACTACAATGAAGATGGACAACT 581
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 474 GCGGTTTGCAAAGCGTATCTTGTCCATAGTGGTGCAGGACTACAATGAAGATGGACAACT 533
Query 582 CTCGTTTTCGGAGTTCTCTGATCTAATAAAGGCTTTTGGAAACTTAGTGGCTGCGAACAA 641
||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 534 GTCGTTTTCGGAGTTCTCTGATCTAATAAAGGCTTTTGGAAATTTAGTGGCTGCTAACAA 593
Query 642 GAAAGAGGAGTTGTTTAAAGCTGCTGACCTGAATGGGGACGGTGTTGTGACGATTGACGA 701
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 594 GAAAGAAGAGTTGTTCAAAGCTGCTGACCTGAATGGGGACGGTGTTGTGACGATTGACGA 653
Query 702 GTTAGCTGCGCTTCTTGCTCTTCAACAAGAACAAGAGCCAATTATAAACAATTGTCCGGT 761
||| |||| |||||||||||||||||||||||| |||||||| ||||| |||||||||||
Sbjct 654 GTTGGCTGTGCTTCTTGCTCTTCAACAAGAACAGGAGCCAATAATAAATAATTGTCCGGT 713
Query 762 GTGTGGTGAGGCTCTTCAGGTCTCTGACAAGCTCAACGCGATGATTCATATGACTCTTTG 821
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 714 GTGTGGTGAGGCTCTTCAGCTCTCTGACAAGCTCAACGCGATGATTCATATGACTCTTTG 773
Query 822 TTTTGACGAAGGAACGGGTAATCAAGTGATGACCGGAGGGTTTTTGACTGATAGACAAGC 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 774 TTTTGACGAAGGAACGGGTAATCAAGTGATGACCGGAGGGTTTTTGACTGATAGACAAGC 833
Query 882 TTCTTATGGATGGATGTTCAAACTAAGTGAATGGACACACTTATCAACTTATGACGTTGG 941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 834 TTCTTATGGATGGATGTTCAAACTAAGTGAATGGACACACTTATCAACTTATGACGTTGG 893
Query 942 TTTGAATACTGGTTCAAGTGCTTCATATATTGTGGTAATTGACCGGAAGAGTAAAAGACT 1001
||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 894 TTTGAATACTGGTTCAAGTGCCTCATATATTGTGGTAATTGACCGGAAGAGTAAGAGACT 953
Query 1002 TGTGGAAGAGTTGATTGATTCAAAGATTGTTCTGTCCATGAGAGCTATTTACCAGTCAAA 1061
|||||||||||||| || |||||||||||||| ||||||||||||||||| ||||||||
Sbjct 954 CGTGGAAGAGTTGATAGACTCAAAGATTGTTCTCTCCATGAGAGCTATTTATCAGTCAAA 1013
Query 1062 AATTGGACTAAGACTTATGGATCAAGGGGCAAAGGAGATTCTGCAGAGACTTTCTGAGAA 1121
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1014 AATTGGACTTCGACTTATGGATCAAGGGGCAAAGGAGATTCTGCAGAGACTTTCTGAGAA 1073
Query 1122 GCAGGGGAAGAAAATGAGCTCAGTTGAATCCGCACAAAAAATACCACGCTTTCTCGAGTT 1181
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1074 GCAGGGGAAGAAAATGAGCTCTGTTGAATCCGCACAAAAAATACCACGCTTTCTCGAGTT 1133
Query 1182 CTTTAAGGATCAAATAAACATGGCTGAAGTCAAGTATCCTCTGCAGCATTTTAAGACGTT 1241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1134 CTTTAAGGATCAAATAAACATGGCTGAAGTCAAGTATCCTCTGCAGCATTTTAAGACGTT 1193
Query 1242 CAATGAGTTCTTTATCCGAGAGTTGAAACCTGGTGCAAGACCAATTGCTTGCATGAACCG 1301
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct 1194 CAATGAGTTCTTCATCCGGGAGTTGAAACCTGGTGCAAGACCAATTGCTTGCATGAAAGG 1253
Query 1302 CAATGATGTTGCTGTATGTGCCGCTGATTGTCGATTAATGGCATTTCAGTCGGTGGAAGA 1361
| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 1254 CGATGATGTTGCCGTATGTGCTGCTGATTGTCGATTAATGGCATTTCAGTCGGTGGAGGA 1313
Query 1362 TAGTACCAGATTCTGGATCAAGGGCAAAAAGTTTTCAATAAGAGGCCTCCTTGGGAAGA- 1420
||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1314 TAGTACCCGTTTCTGGATCAAGGGCAAAAAGTTTTCAATAAGAGGCCTTCTTGGGAAGAG 1373
Query 1421 -A-TGTGAATCCAAATGCCTTCCTTGATGGATCTTTGGTTATATTCAGACTAGCACCACA 1478
| ||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct 1374 TACTGTGAATACAAATGCCTTCCTTGATGGATCTTTGGTGATATTCCGACTAGCACCACA 1433
Query 1479 GGATTATCATCGGTTTCATGTCCCTGTCTCTGGAGTCATTGAACAGTTTGTGGATGTTTC 1538
||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct 1434 GGATTATCATCGGTTTCATGTCCCTGTCTCTGGAGTCATTGAAAAGTTTGTGGATCTTTC 1493
Query 1539 TGGAAGCTTATATACAGTTAATCCAATTGCGGTCAATAGCAAGTACTGTAATGTATTCAC 1598
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1494 TGGAAGCTTATATACAGTTAATCCGATTGCGGTCAATAGCAAGTACTGTAATGTATTCAC 1553
Query 1599 GGAAAATAAACGAACCGTTGCAATTATATCAACAGCAGAATTTGGAAAGGTTGCTTTTGT 1658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1554 GGAAAATAAACGAACCGTTGCAATTATATCAACAGCAGAATTTGGAAAGGTTGCTTTTGT 1613
Query 1659 TGCAATCGGTGCAACAATGGTTGGTAGCATAAATTTTGTTAGAAAGGAAGGAGAGCATGT 1718
|||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 1614 TGCAATCGGTGCGACAATGGTTGGTAGCATAAATTTTGAGAGAAAGGAAGGAGAACATGT 1673
Query 1719 GAAGAAAGGAGATGAACTTGGTTATTTTTCGTTTGGTGGAAGCACAGTTATATGTGTCTT 1778
||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1674 GAAGAAAGGGGATGAACTTGGTTATTTTTCATTTGGTGGAAGCACAGTTATATGTGTCTT 1733
Query 1779 TGAAAAGGACGCGATCGGGATCGATAATGATCTCTTGGTTAACAGTGGTAGGTCTTTAGA 1838
|||||||||| ||||| |||||||| | |||||||||||||||||||||||||| |||||
Sbjct 1734 TGAAAAGGACTCGATCCGGATCGATGAGGATCTCTTGGTTAACAGTGGTAGGTCCTTAGA 1793
Query 1839 GACATTAGTGAGTGTTGGAATGCAATTAGGTGTCTCCACAAGGACATTTGCTAGGTCTAC 1898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1794 GACATTAGTGAGTGTTGGAATGCAATTAGGTGTCTCCACAAGGACATTTGCTAGGTCTAC 1853
Query 1899 ATTGA 1903
|||||
Sbjct 1854 ATTGA 1858
Score = 431 bits (233), Expect = 1e-119
Identities = 274/293 (94%), Gaps = 6/293 (2%)
Strand=Plus/Plus
Query 1 ATGGGAAACGGAAACTCAA--G-GGAGGCTAAGGAATCGAGACGGTCAAGGCTACGACAT 57
||||||||||||||||||| | ||||||||| |||||||||||||||| |||||||||
Sbjct 1 ATGGGAAACGGAAACTCAAGGGAGGAGGCTAAAGAATCGAGACGGTCAAAGCTACGACAG 60
Query 58 AAGCTACAAAAGTTTCGCATTCACCGTCGTCATCTTCGTAGTTCTCGAAA--C-TCGGCA 114
||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||
Sbjct 61 AAGCTACAAAAGTTTCGCATTCACCGTCGTCATCTTCGTTGTTCTCGAAACTCGTCGGCA 120
Query 115 GGAATGGTGATACAACGAACTGTTTCCGCCGAGGATTTCTCCGGCATTGCGCTTCTCACT 174
|||||||| |||||| || |||| ||||||||||||||||||||||||||||||||||||
Sbjct 121 GGAATGGTCATACAAAGAGCTGTGTCCGCCGAGGATTTCTCCGGCATTGCGCTTCTCACT 180
Query 175 CTCATTGGCGCGGAAATGAAGTTTAAGGACAAGTGGCTCGCTTGTGTTTCTTTCGGTGAA 234
|||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 181 CTCATTGGCGCGGATATGAAGTTTAAAGACAAGTGGCTCGCTTGTGTTTCTTTCGGTGAA 240
Query 235 CAGACTTTCAGAACTGAAATCTCAGATACTACACAGAAGCCAATTTGGAACTC 287
|||||||| |||||||||||||| ||||||||| |||||||||||||||||||
Sbjct 241 CAGACTTTTAGAACTGAAATCTCTGATACTACAGAGAAGCCAATTTGGAACTC 293
> Ahg492220 jgi|Araly1|492220|fgenesh2_kg.7__1653__AT4G25970.1
Length=2345
Score = 1807 bits (978), Expect = 0.0
Identities = 1604/1903 (84%), Gaps = 56/1903 (3%)
Strand=Plus/Plus
Query 1 ATGGGAAACGGAAACTCAAGGGAGGCTAAGGAATCGAGACGGTCAAGGCTACGACATAAG 60
||||||||||||||||| | |||||| || || ||| | || |||| | | ||||| |||
Sbjct 131 ATGGGAAACGGAAACTCCACGGAGGCGAAAGAGTCGCGCCGATCAAAGATGCGACAGAAG 190
Query 61 CTACAAAAGTTTCGCATTCACCGTCGTCATCTTCGT--A-GTTCTC-GAAAC-TCGGCAG 115
| || || ||||||| | ||| |||| | |||| | | || | ||| | || | |
Sbjct 191 ATTCAGAACTTTCGCAGCCGCCGCCGTCTTAGTCGTCCAGGATC-CGGAAGCGTC-TCCG 248
Query 116 GAATGGTGA-TACA-ACGAACTGTTTCCGCCGAGGATTTCTCCGGCATTGCGCTTCTCAC 173
|| |||| | | || | || ||||| ||| || |||||| |||||||||| ||||||||
Sbjct 249 GATTGGTTAGT-CAGA-GATCTGTTAGCGCAGATGATTTCGCCGGCATTGCTCTTCTCAC 306
Query 174 TCTCATTGGCGCGGAAATGAAGTTTAAGGACAAGTGGCTCGCTTGTGTTTCTTTCGGTGA 233
|||||| |||||||| |||||||| ||||||||||||||||| |||||||| ||||| ||
Sbjct 307 TCTCATCGGCGCGGAGATGAAGTTCAAGGACAAGTGGCTCGCCTGTGTTTCCTTCGGGGA 366
Query 234 ACAGACTTTCAGAACTG-AAATCTCAGATACTACACAGAAGCCAATTTGGAACTCAGAGA 292
||| |||||| | | | | || |||||| | ||| ||||||| |||||||| || || |
Sbjct 367 ACAAACTTTCCGTTC-GCAGATTTCAGATTCCACAGAGAAGCCGATTTGGAATTCGGAAA 425
Query 293 AGAAGCTTTTGTTGGAGAAAAATGGACCAAGTCTTGCTAGGGTCTCAGTATTTGAGACCA 352
|||||||| | |||||||||||||||||||||| ||||| |||| |||||||||||||
Sbjct 426 AGAAGCTTCTCCTGGAGAAAAATGGACCAAGTCTGGCTAGAATCTCTGTATTTGAGACCA 485
Query 353 ATAGGGTAGCGAGGAACAAAATCATCGGTTATTGTGAGCTTGATATA-TTCGATTTTGTA 411
|||| | ||| |||||| ||| | |||||||||||||||||| || || || || |||
Sbjct 486 ATAGACTCTCGAAGAACAATATCGTTGGTTATTGTGAGCTTGATCTACTT-GAATTCGTA 544
Query 412 GTGCAGGAACCTGAGTC-GACTTGTAAGTCATTTAACTTGTTAGATCCC-ACATCATCCA 469
|||||||||||||| || | |||| || |||||| || ||||||| ||| | ||||| |
Sbjct 545 GTGCAGGAACCTGACTCTG-CTTGCAAATCATTTGACCTGTTAGA-CCCTGCCTCATCTA 602
Query 470 ATGTTGTTGGCTCCAT-TTTCCTTTCTTGCGCTATTGAGGATCCTGTTGAAACTGAGAGG 528
||||||||||| ||| ||| | || ||| | ||||||||||||||||||| ||||
Sbjct 603 ATGTTGTTGGCAGCATGTTT-GTCTCATGCTCCGTTGAGGATCCTGTTGAAACCGAGA-- 659
Query 529 C-GGTTT-GCAAAGCGTATCTTGTCCATAGTGGACTACAATGAAGATGGACAACTCTCGT 586
| |||| ||||||||||| ||||||||||||||||| | ||||||||| ||||||| |
Sbjct 660 CATGTTTCGCAAAGCGTATTTTGTCCATAGTGGACTATGACGAAGATGGAAAACTCTCAT 719
Query 587 TTTCGGAGTTCTCTGATCTAATAAAGGCTTTTGGAAACT-TAGTGGCTGCGAACAAGAAA 645
| || |||||||||||||| | || |||||||| || | |||||||||| |||||||||
Sbjct 720 TCTCAGAGTTCTCTGATCTGGTGAATGCTTTTGGGAA-TATAGTGGCTGCTAACAAGAAA 778
Query 646 GAGGAGTTGTTTAAAGCTGCTGACCTGAATGGGGACGGTGTTGTGACGATTGACGAGTTA 705
||||||||||| ||||| ||||||||||||||||| |||||||| || ||||| |||||
Sbjct 779 GAGGAGTTGTTCAAAGCCGCTGACCTGAATGGGGATGGTGTTGTTACAATTGATGAGTTG 838
Query 706 GCTGCGCTTCTTGCTC-TTCAACAAGAACAAGAGCCAATTATAAACAATTGTCCGGTGTG 764
||||| |||||||| | ||||||| ||||| |||||||||||||| | ||||||||| ||
Sbjct 839 GCTGCACTTCTTGC-CGTTCAACAGGAACAGGAGCCAATTATAAATAGTTGTCCGGTTTG 897
Query 765 TGGTGAGGCTCTTCAGGTCTCTGACAAGCTCAACGCGATGATTCATATGACTCTTTGTTT 824
|||||||||||||| || |||||||||||| || ||||| ||||||||||| |||||
Sbjct 898 CGGTGAGGCTCTTCA--ACT-TGACAAGCTCAATGCAATGATCCATATGACTCTCTGTTT 954
Query 825 TGACGAAGGAACGGGTAATCAAGTGATGACCGGAGGGTTTTTGACTGATAGACAAGCTTC 884
|||||||||||| ||||||||| ||||||||||||||| ||||||||||| || |||||
Sbjct 955 TGACGAAGGAACTGGTAATCAAACGATGACCGGAGGGTTCTTGACTGATAGGCAGGCTTC 1014
Query 885 TTATGGATGGATGTTCAAACTAAGTGAATGGACACA-CTTATCAACTTATGACGTTGGTT 943
|||||||||||||||||||||||||||||||| || || |||||||||||| |||||||
Sbjct 1015 ATATGGATGGATGTTCAAACTAAGTGAATGGACTCATCT-ATCAACTTATGATGTTGGTT 1073
Query 944 TGAATACTGGTTCAAGTGCTTCATATATTGTGGTAATTGACCGGAAGAGTAAAAGACTTG 1003
||||||||||||||||||||||| |||||||||| ||||| ||||||| ||| || || |
Sbjct 1074 TGAATACTGGTTCAAGTGCTTCACATATTGTGGTGATTGATCGGAAGACTAAGAGGCTCG 1133
Query 1004 TGGAAGAGTTGATTGATTCAAAGATTGTTCTGTCCATGAGAGCTATTTACCAGTCAAAAA 1063
||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct 1134 TGGAAGAGTTGATTGATTCAAAGATTGTTATGTCGATGAGAGCTATTTACCAGTCAAAAA 1193
Query 1064 TTGGACTAAGACTTATGGATCAAGGGGCAAAGGAGATTCTGCAGAGAC-TTTCTGAGAAG 1122
| ||||| | |||||||| ||||| ||||| |||||| |||||| || ||||||||||
Sbjct 1194 TCGGACTCCGGCTTATGGACCAAGGAGCAAAAGAGATTTTGCAGA-ACCTTTCTGAGAAA 1252
Query 1123 CAGGGGAAGAAAATGAGCTCAGTTGAATCCGCACAAAAAATACC-ACGCTTTCTCGAGTT 1181
||||||||||| |||| | |||||||||| || ||||| ||||| | |||||||||||||
Sbjct 1253 CAGGGGAAGAAGATGAACACAGTTGAATCTGCCCAAAATATACCCA-GCTTTCTCGAGTT 1311
Query 1182 CTTT-AAGGATCAAATAAACATGGCTGAAGTCAAGTATCCTCTGCAGCATTTTAAGACGT 1240
||| |||||||||||||||||||| |||||||||||||||||| | |||||||||||||
Sbjct 1312 -TTTCAAGGATCAAATAAACATGGCCGAAGTCAAGTATCCTCTGGACCATTTTAAGACGT 1370
Query 1241 TCAATGAGTTCTTTATCCGAGAGTTGAAA-CCTGGTGCAAGACCAATTGCTTGCATGAAC 1299
||||||| ||||| | || ||||| ||| |||||||||||||||||||| |||||| |
Sbjct 1371 TCAATGAATTCTTCGTACGGGAGTT-AAAGCCTGGTGCAAGACCAATTGCGTGCATGGAT 1429
Query 1300 C-GCAATGATGTTGCTGTATGTGCCGCTGATTGTCGATTAATGGCATTTCAGTCGGTGGA 1358
| | | |||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||
Sbjct 1430 CAGGA-TGATGTTGCTGTATCTGCTGCTGATTGTCGATTAATGGCGTTTCAATCGGTGGA 1488
Query 1359 AGATAGTAC-CAGATTCTGGATCAAGGGCAAAAAGTTTTCAAT-AAGAGGCCTCCTTGGG 1416
||||| || | | ||||||||||||||| ||||||||||| || ||| |||||||||
Sbjct 1489 TGATAGCACGCGG-TTCTGGATCAAGGGCCGTAAGTTTTCAATCAA-AGGTCTCCTTGGG 1546
Query 1417 AA-GAATGTGAA-TCCAAATGCCTTCCTTGATGGATCTTTGGTTATATTCAGACTAGCAC 1474
|| || |||| | || | |||| || |||||||||||||||| |||||| || | || |
Sbjct 1547 AATGA-TGTGCAGTC-AGATGCTTTTATTGATGGATCTTTGGTGATATTCCGATTGGCTC 1604
Query 1475 CACAGGATTATCATCGGTTTCATGTC-CCTGTCTCTGGAGTCATTGAACAGTTTGTGGAT 1533
||||||| |||||||| |||||| || ||||||||||| ||||||||| ||||||| ||
Sbjct 1605 CACAGGACTATCATCGTTTTCAT-TCTCCTGTCTCTGGTGTCATTGAAAAGTTTGTCAAT 1663
Query 1534 GTTTCTGGAAGCTTATATACAGTTAATCCAATTGCGGTCAATAGCAAGTACTGTAATGTA 1593
||||||||||||||||||||||||||||| || || |||||||||||||||||||||||
Sbjct 1664 GTTTCTGGAAGCTTATATACAGTTAATCCGATAGCTGTCAATAGCAAGTACTGTAATGTG 1723
Query 1594 TTCACGGAAAATAAACGAACCGTTGCAATTATATCAACAGCAGAATTTGGAAAGGTTGCT 1653
||||| || |||||||| || | | |||||||||||||||||| ||||||||||| ||
Sbjct 1724 TTCACTGAGAATAAACGGACAATCGTAATTATATCAACAGCAGAGTTTGGAAAGGTCGCA 1783
Query 1654 TTTGTTGCAATCGGTGCAACAATGGTTGGTAGCATAAATTTTGTTAGA-AAGGAAGGAGA 1712
|||||||| || || || |||||||||||||| || | |||||||| ||| | |||||
Sbjct 1784 TTTGTTGCGATTGGAGCGACAATGGTTGGTAGTATCACCTTTGTTAGGCAAG-AGGGAGA 1842
Query 1713 GCATGTGAAGAAAGGAGATGAACTTGGTTATTTTTCGTTTGGTGGAAGCACAGTTATATG 1772
|||||||||||||| || || |||||||| ||||| ||||||||||||||||||||| |
Sbjct 1843 CCATGTGAAGAAAGGGGACGAGCTTGGTTACTTTTCATTTGGTGGAAGCACAGTTATAAG 1902
Query 1773 TGTCTTTGAAAAGGACGCGATCGGGATCGATAATGATCTCTTGGTTAACAGTGGTAGGTC 1832
||||||||||||||| |||| ||| ||| | |||||||| | |||||||| ||||||
Sbjct 1903 CGTCTTTGAAAAGGACTCGATTAAGATTGATGAGGATCTCTTAGCTAACAGTGCTAGGTC 1962
Query 1833 TTTAGAGACATTAGTGAGTGTTGGAATGCAATTAGGTGTCTCC 1875
|| ||||||||||| | ||||||||||||| |||||||||||
Sbjct 1963 CTTGGAGACATTAGTTACTGTTGGAATGCAACTAGGTGTCTCC 2005
> Ahg495816 jgi|Araly1|495816|fgenesh2_kg.8__1632__AT5G57190.1
Length=1941
Score = 1526 bits (826), Expect = 0.0
Identities = 1099/1220 (90%), Gaps = 62/1220 (5%)
Strand=Plus/Plus
Query 364 AGGAACAAAATCATCGGTTATTGTGAGCTTGATATATTCGATTTTGTAGTGCAGGAACCT 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 388 AGGAACAAAATCATCGGTTATTGTGAGCTTGATATATTCGATTTTGTAGTGCAGGAACCT 447
Query 424 GAGTCGACTTGTAAGTCATTTAACTTGTTAGATCCCACATCATCCAATGTTGTTGGCTCC 483
|||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 448 GAGTCGGCGTGTAAGTCATTTGACTTGTTAGATCCCACATCATCCAATGTTGTTGGCACC 507
Query 484 ATTTTCCTTTCTTGCGCTATTGAGGATCCTGTTGAAACTGAGAGGCGGTTTGCAAAGCGT 543
||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||
Sbjct 508 ATTTTCCTTTCTTGCTCTATTGAGGATCCTGTTGAAACCGAGAGGCGGTTTGCAAAGCGT 567
Query 544 ATCTTGTCCATAGTGGACTACAATGAAGATGGACAACTCTCGTTTTCGGAGTTCTCTGAT 603
||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct 568 ATCTTGTCCATTGTGGACTACAATCAAGATGGACAACTGTCGTTTTCGGAGTTCTCTGAT 627
Query 604 CTAATAAAGGCTTTTGGAAACTTAGTGGCTGCGAACAAGAAAGAGGAGTTGTTTAAAGCT 663
|||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||
Sbjct 628 CTAATAAAGGCTTTTGGAAACTTAGTGGCTGCTAACAAGAAGGAGGAGTTGTTCAAAGCC 687
Query 664 GCTGACCTGAATGGGGACGGTGTTGTGACGATTGACGAGTTAGCTGCGCTTCTTGCTCTT 723
||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 688 GCTGATCTGAATGGGGACGGTGTTGTGACAATTGACGAGTTGGCTGCGCTTCTTGCTCTT 747
Query 724 CAACAAGAACAAGAGCCAATTATAAACAATTGTCCGGTGTGTGGTGAGGCTCTTCAGGTC 783
||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct 748 CAACAAGAACAGGAGCCAATTATAAATAATTGTCCGGTGTGTGGTGAGGCTCTTCAGCTC 807
Query 784 TCTGACAAGCTCAACGCGATGATTCATATGACTCTTTGTTTTGACGAAGGAACGGGTAAT 843
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 808 TCTGACAAGCTCAACGCGATGATCCATATGACTCTTTGTTTTGACGAAGGAACGGGTAAT 867
Query 844 CAAGTGATGACCGGAGGGTTTTTGACTGATAGACAAGCTTCTTATGGATGGATGTTCAAA 903
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 868 CAAGTGATGACCGGAGGGTTTTTGACTGATAGACAAGCTTCTTATGGTTGGATGTTCAAA 927
Query 904 CTAAGTGAATGGACACACTTATCAACTTATGACGTTGGTTTGAATACTGGTTCAAGTGCT 963
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 928 CTAAGTGAATGGACACACTTATCAACTTATGACGTGGGTTTGAATACTGGTTCAAGTGCT 987
Query 964 TCATATATTGTGGTAATTGACCGGAAGAGTAAAAGACTTGTGGAAGAGTTGATTGATTCA 1023
|||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct 988 TCATATATTGTGGTGATTGACCGGAAGAGTAAGAGACTTGTGGAAGAGTTGATTGACTCA 1047
Query 1024 AAGATTGTTCTGTCCATGAGAGCTATTTACCAGTCAAAAATTGGACTAAGACTTATGGAT 1083
||||||||||||||||||||||||||||| ||||| ||||||||| | |||||||||||
Sbjct 1048 AAGATTGTTCTGTCCATGAGAGCTATTTATCAGTCCAAAATTGGATTCCGACTTATGGAT 1107
Query 1084 CAAGGGGCAAAGGAGATTCTGCAGAGACTTTCTGAGAAGCAGGGGAAGAAAATGAGCTCA 1143
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1108 CAAGGGGCAAAGGAGATTCTACAGAGACTTTCTGAGAAGCAGGGGAAGAAAATGAGCTCA 1167
Query 1144 GTTGAATCCGCAC--AAAA-A--ATAC---CAC--G--CTTT----C--TCGAG------ 1179
||||||||||||| |||| | || | | | | |||| | | |||
Sbjct 1168 GTTGAATCCGCACAAAAAATACCATGCTTTCTCGAGTTCTTTAAGGCATTTGAGATTTTT 1227
Query 1180 T-TCT-TT-AAGGATCAAATAAACATGGCTGAAGTCAAGTATCCTCTGCAGCATTTTAAG 1236
| ||| || ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1228 TGTCTGTTGCTGGATCAAATAAACATGGCTGAAGTCAAGTATTCTCTGCAGCATTTTAAG 1287
Query 1237 ACGTTCAATGAGTTCTTTATCCGAGAGTTGAAACCTGGTGCAAGACCAATTGCTTGCATG 1296
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1288 ACGTTCAATGAGTTCTTCATCCGGGAGTTGAAACCTGGTGCAAGACCAATTGCTTGCATG 1347
Query 1297 AACCGCAATGATGTTGCTGTATGTGCCGCTGATTGTCGAT-TAATGGCATTTCAGTCGGT 1355
|| || |||||||||| |||||||| ||||||||||| | |||||||||||||||||||
Sbjct 1348 AAACGTGATGATGTTGCCGTATGTGCTGCTGATTGTCG-TGTAATGGCATTTCAGTCGGT 1406
Query 1356 GGAAGATAGTAC-CAGATTCTGGATCAAGGGCAA-----AAAG-T--T---TT-CAATA- 1401
||| |||||||| | | |||||||||||| | || |||| | | || ||| |
Sbjct 1407 GGAGGATAGTACAC-GTTTCTGGATCAAGAG-AACTCTCAAAGCTGATAAGTTGCAACAC 1464
Query 1402 AG---A--G-----GCCTCCTTGGGAAGAATGTGAATCCAAA-TGCCTTCCTTGATGGAT 1450
| | | |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1465 ATCTTAAAGTTTTTGCCTCCTTGGGAAGAATGTGAATCCAAAATGCCTTCCTTGATGGAT 1524
Query 1451 CTTTGGTTATATTCAG-AC-TAGCACCACAGGATTATCATCGGTTTCATGTCCCTGTCTC 1508
|||||| || | || || ||| | | |||||||||| |||||||||||||||||
Sbjct 1525 CTTTGGCTAGAA-CACTACATAGTTCTT--G-ATTATCATCGCTTTCATGTCCCTGTCTC 1580
Query 1509 TGGAGTCATTGAACAGTTTG 1528
||||||||||||| ||||||
Sbjct 1581 TGGAGTCATTGAAAAGTTTG 1600
Score = 440 bits (238), Expect = 2e-122
Identities = 315/348 (91%), Gaps = 22/348 (6%)
Strand=Plus/Plus
Query 1 ATGGGAAACGGAAACTCAAGGGAGGCTAAGGAATCGAGACGGTCAAGGCTACGACATAAG 60
||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||
Sbjct 1 ATGGGAAACGGAAACTCAAGGGAGGCTAAAGAATCGAGACGGTCAAAGCTACGACAGAAG 60
Query 61 CTACAAAAGTTTCGCATTCACCGTCGTCATCTTCGTAGTTCTCGAAACTCGGCAGGAATG 120
|||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct 61 CTACAAAAGTTTCGCATTCACCGTCGTCATCTTCGTTGTTCTCGAAACTCAGCAGGAATG 120
Query 121 GTGATACAACGAACTGTTTCCGCCGAGGATTTCTCCGGCATTGCGCTTCTCACTCTCATT 180
|||||||||||| |||| |||||||||||||||||||||||||||||||||||| | |
Sbjct 121 GTGATACAACGAGCTGTGTCCGCCGAGGATTTCTCCGGCATTGCGCTTCTCACT-T--T- 176
Query 181 GGCGCGGAAATGAAGTTTAAGGACAAGTGGCTCGCTTGTGTTTCTTTCGGTGAACAGACT 240
|| | | | |||||||||||||||||||||||||||||||||||||
Sbjct 177 -------AA--G--G---A----CAAGTGGCTCGCTTGTGTTTCTTTCGGTGAACAGACT 218
Query 241 TTCAGAACTGAAATCTCAGATACTACACAGAAGCCAATTTGGAACTCAGAGAAGAAGCTT 300
|| |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 219 TTTAGAACTAAAATCTCAGATACTACAGAGAAGCCAATTTGGAACTCAGAGAAGAAGCTT 278
Query 301 TTGTTGGAGAAAAATGGACCAAGTCTTGCTAGGGTCTCAGTATTTGAG 348
|||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 279 TTGTTGGAGAAAAATGGACCAAGTCTTGCTAGGGTCTCTGTATTTGAG 326
Score = 167 bits (90), Expect = 3e-40
Identities = 108/117 (92%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1784 AGGACGCGATCGGGATCGATAATGATCTCTTGGTTAACAGTGGTAGGTCTTTAGAGACAT 1843
||||| ||||| ||||||| | ||||||||||| |||||||||||||| |||||||| |
Sbjct 1823 AGGACTCGATCCAGATCGATGAGGATCTCTTGGTAAACAGTGGTAGGTCCTTAGAGACGT 1882
Query 1844 TAGTGAGTGTTGGAATGCAATTAGGTGTCTCCACAAGGACATTTGCTAGGTCTACAT 1900
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1883 TAGTGAGAGTTGGAATGCAATTAGGTGTCTCCACAAGGACATTTGCTAGGTCTACAT 1939
Score = 148 bits (80), Expect = 1e-34
Identities = 90/95 (95%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 1640 TTGGAAAGGTTGCTTTTGTTGCAATCGGTGCAACAATGGTTGGTAGCATAAATTTTGTTA 1699
||| |||| |||||||| ||||||||||||| |||||||||||||||||||||||||| |
Sbjct 1589 TTGAAAAGTTTGCTTTTATTGCAATCGGTGCGACAATGGTTGGTAGCATAAATTTTGTCA 1648
Query 1700 GAAAGGAAGGAGAGCATGTGAAGAAAGGAGATGAA 1734
|||||||||||||||||||||||||||||||||||
Sbjct 1649 GAAAGGAAGGAGAGCATGTGAAGAAAGGAGATGAA 1683
Score = 54.7 bits (29), Expect = 2e-06
Identities = 32/33 (97%), Gaps = 1/33 (3%)
Strand=Plus/Plus
Query 1732 GAA-CTTGGTTATTTTTCGTTTGGTGGAAGCAC 1763
||| |||||||||||||||||||||||||||||
Sbjct 1717 GAAGCTTGGTTATTTTTCGTTTGGTGGAAGCAC 1749
> Ahg359372 jgi|Araly1|359372|fgenesh1_pg.C_scaffold_161000001
Length=1503
Score = 1459 bits (790), Expect = 0.0
Identities = 894/943 (95%), Gaps = 12/943 (1%)
Strand=Plus/Plus
Query 973 GTGGTAATTGACCGGAAGAGTAAAAGACTTGTGGAAGAGTTGATTGATTCAAAGATTGTT 1032
||||||||||||||||||||||| ||||| |||||||||||||| || ||||||||||||
Sbjct 556 GTGGTAATTGACCGGAAGAGTAAGAGACTCGTGGAAGAGTTGATAGACTCAAAGATTGTT 615
Query 1033 CTGTCCATGAGAGCTATTTACCAGTCAAAAATTGGACTAAGACTTATGGATCAAGGGGCA 1092
|| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct 616 CTCTCCATGAGAGCTATTTATCAGTCAAAAATTGGACTTCGACTTATGGATCAAGGGGCA 675
Query 1093 AAGGAGATTCTGCAGAGACTTTCTGAGAAGCAGGGGAAGAAAATGAGCTCAGTTGAATCC 1152
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 676 AAGGAGATTCTGCAGAGACTTTCTGAGAAGCAGGGGAAGAAAATGAGCTCTGTTGAATCC 735
Query 1153 GCACAAAAAATACCACGCTTTCTCGAGTTCTTT-A---A--G---GATCAAATAAACATG 1203
||||||||||||||||||||||||||||||||| | | | |||||||||||||||
Sbjct 736 GCACAAAAAATACCACGCTTTCTCGAGTTCTTTAAGGCATGGAAAGATCAAATAAACATG 795
Query 1204 GCTGAAGTCAAGTATCCTCTGCAGCATTTTAAGACGTTCAATGAGTTCTTTATCCGAGAG 1263
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 796 GCTGAAGTCAAGTATCCTCTGCAGCATTTTAAGACGTTCAATGAGTTCTTCATCCGGGAG 855
Query 1264 TTGAAACCTGGTGCAAGACCAATTGCTTGCATGAACCGCAATGATGTTGCTGTATGTGCC 1323
||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||
Sbjct 856 TTGAAACCTGGTGCAAGACCAATTGCTTGCATGAAAGGCGATGATGTTGCCGTATGTGCT 915
Query 1324 GCTGATTGTCGATTAATGGCATTTCAGTCGGTGGAAGATAGTACCAGATTCTGGATCAAG 1383
||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||
Sbjct 916 GCTGATTGTCGATTAATGGCATTTCAGTCGGTGGAGGATAGTACCCGTTTCTGGATCAAG 975
Query 1384 GGCAAAAAGTTTTCAATAAGAGGCCTCCTTGGGAAGA--A-TGTGAATCCAAATGCCTTC 1440
|||||||||||||||||||||||||| |||||||||| | ||||||| |||||||||||
Sbjct 976 GGCAAAAAGTTTTCAATAAGAGGCCTTCTTGGGAAGAGTACTGTGAATACAAATGCCTTC 1035
Query 1441 CTTGATGGATCTTTGGTTATATTCAGACTAGCACCACAGGATTATCATCGGTTTCATGTC 1500
||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct 1036 CTTGATGGATCTTTGGTGATATTCCGACTAGCACCACAGGATTATCATCGGTTTCATGTC 1095
Query 1501 CCTGTCTCTGGAGTCATTGAACAGTTTGTGGATGTTTCTGGAAGCTTATATACAGTTAAT 1560
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 1096 CCTGTCTCTGGAGTCATTGAAAAGTTTGTGGATCTTTCTGGAAGCTTATATACAGTTAAT 1155
Query 1561 CCAATTGCGGTCAATAGCAAGTACTGTAATGTATTCACGGAAAATAAACGAACCGTTGCA 1620
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1156 CCGATTGCGGTCAATAGCAAGTACTGTAATGTATTCACGGAAAATAAACGAACCGTTGCA 1215
Query 1621 ATTATATCAACAGCAGAATTTGGAAAGGTTGCTTTTGTTGCAATCGGTGCAACAATGGTT 1680
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1216 ATTATATCAACAGCAGAATTTGGAAAGGTTGCTTTTGTTGCAATCGGTGCGACAATGGTT 1275
Query 1681 GGTAGCATAAATTTTGTTAGAAAGGAAGGAGAGCATGTGAAGAAAGGAGATGAACTTGGT 1740
|||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||
Sbjct 1276 GGTAGCATAAATTTTGAGAGAAAGGAAGGAGAACATGTGAAGAAAGGGGATGAACTTGGT 1335
Query 1741 TATTTTTCGTTTGGTGGAAGCACAGTTATATGTGTCTTTGAAAAGGACGCGATCGGGATC 1800
|||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct 1336 TATTTTTCATTTGGTGGAAGCACAGTTATATGTGTCTTTGAAAAGGACTCGATCCGGATC 1395
Query 1801 GATAATGATCTCTTGGTTAACAGTGGTAGGTCTTTAGAGACATTAGTGAGTGTTGGAATG 1860
||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1396 GATGAGGATCTCTTGGTTAACAGTGGTAGGTCCTTAGAGACATTAGTGAGTGTTGGAATG 1455
Query 1861 CAATTAGGTGTCTCCACAAGGACATTTGCTAGGTCTACATTGA 1903
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 1456 CAATTAGGTGTCTCCACAAGGACATTTGCTAGGTCTACATTGA 1498
Score = 889 bits (481), Expect = 0.0
Identities = 533/559 (95%), Gaps = 0/559 (0%)
Strand=Plus/Plus
Query 1 ATGGGAAACGGAAACTCAAGGGAGGCTAAGGAATCGAGACGGTCAAGGCTACGACATAAG 60
||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||
Sbjct 1 ATGGGAAACGGAAACTCAAGGGAGGCTAAAGAATCGAGACGGTCAAAGCTACGACAGAAG 60
Query 61 CTACAAAAGTTTCGCATTCACCGTCGTCATCTTCGTAGTTCTCGAAACTCGGCAGGAATG 120
|||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct 61 CTACAAAAGTTTCGCATTCACCGTCGTCATCTTCGTTGTTCTCGAAACTCAGCAGGAATG 120
Query 121 GTGATACAACGAACTGTTTCCGCCGAGGATTTCTCCGGCATTGCGCTTCTCACTCTCATT 180
|||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 GTGATACAACGAGCTGTGTCCGCCGAGGATTTCTCCGGCATTGCGCTTCTCACTCTCATT 180
Query 181 GGCGCGGAAATGAAGTTTAAGGACAAGTGGCTCGCTTGTGTTTCTTTCGGTGAACAGACT 240
|||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 181 GGCGCGGATATGAAGTTTAAGGACAAGTGGCTCGCCTGTGTTTCTTTCGGTGAACAGACT 240
Query 241 TTCAGAACTGAAATCTCAGATACTACACAGAAGCCAATTTGGAACTCAGAGAAGAAGCTT 300
|| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct 241 TTTAGAACTGAAATCTCAGATACTACAGAGAAGCCAATTTGGAACTCGGAGAAGAAGCTT 300
Query 301 TTGTTGGAGAAAAATGGACCAAGTCTTGCTAGGGTCTCAGTATTTGAGACCAATAGGGTA 360
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |
Sbjct 301 TTGTTGGAGAAAAATGGACCAAGTCTTGCTAGGGTCTCTGTATTTGAGACAAATAGGCTC 360
Query 361 GCGAGGAACAAAATCATCGGTTATTGTGAGCTTGATATATTCGATTTTGTAGTGCAGGAA 420
| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 361 TCAAGGAACAAAATCATCGGTTATTGTGAGCTTGATATATTCGATTTTGCAGTGCAGGAA 420
Query 421 CCTGAGTCGACTTGTAAGTCATTTAACTTGTTAGATCCCACATCATCCAATGTTGTTGGC 480
||||||||| | |||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct 421 CCTGAGTCGGCATGTAAGTCATTTGACTTGTTAGATCCCACAGCATCCAATGTTGTTGGC 480
Query 481 TCCATTTTCCTTTCTTGCGCTATTGAGGATCCTGTTGAAACTGAGAGGCGGTTTGCAAAG 540
|||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct 481 ACCATTTTCCTTTCTTGCGCTATTGAGGATCCTGTTGAAACCGAGCGGCGGTTTGCAAAG 540
Query 541 CGTATCTTGTCCATAGTGG 559
|||||||||||||||||||
Sbjct 541 CGTATCTTGTCCATAGTGG 559
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 71685841090
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5