BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G57200.1 Length=1776 Score E Sequences producing significant alignments: (Bits) Value Ahg917426 jgi|Araly1|917426|Al_scaffold_0008_2177 2789 0.0 Ahg492223 jgi|Araly1|492223|fgenesh2_kg.7__1656__AT4G25940.1 1419 0.0 Ahg887320 jgi|Araly1|887320|Al_scaffold_0161_2 1031 0.0 > Ahg917426 jgi|Araly1|917426|Al_scaffold_0008_2177 Length=1773 Score = 2789 bits (1510), Expect = 0.0 Identities = 1693/1781 (95%), Gaps = 13/1781 (1%) Strand=Plus/Plus Query 1 ATGGGAACGTTCACGAGCTTTCGAAAAGCCTATGGAGCGCTCAAAGATACAACCACCGTT 60 ||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||| Sbjct 1 ATGGGAACGTTCACGAGCTTTCGAAAAGCGTATGGAGCACTCAAAGACACAACCACCGTT 60 Query 61 GGTCTCGCTAAGGTCAACAGCGAATTCAAGGATTTAGATATTGCGATCGTCAAAGCGACG 120 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || Sbjct 61 GGTCTCGCTAAGGTCAACAGCGAATTCAAGGATTTAGATATTGCGATCGTTAAAGCAACC 120 Query 121 AATCATGTTGAATCTCCACCAAAAGAACGTCATGTTCGTAAAATATTCTCGGCGACATCT 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 AATCATGTTGAATCTCCACCAAAAGAACGTCATGTTCGTAAAATATTCTCGGCGACATCT 180 Query 181 GTGATACAACCACGAGCAGATGTAGCTTATTGCATTCATGCATTATCTAAAAGATTATCG 240 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 GTAATACAACCACGAGCAGATGTAGCTTATTGCATTCATGCATTATCTAAAAGATTATCG 240 Query 241 AAAACTCGCAATTGGGTTGTTGCAATGAAAGTGTTAATAGTAATTCACAGAACATTAAGA 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 241 AAAACTCGCAATTGGGTTGTTGCAATGAAGGTGTTAATAGTAATTCACAGAACATTAAGA 300 Query 301 GAAGGTGATCCAACATTTAGAGAAGAGCTTCTAAATTACTCACATAGAAGACATATACTC 360 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 301 GAAGGTGATCCAACATTCAGAGAAGAGCTTCTAAATTACTCACATAGAAGACATATACTC 360 Query 361 AGAATATCTAACTTCAAAGATGACACAAGTCCTCTTGCGTGGGATTGTTCTGCTTGGGTT 420 |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct 361 AGAATATCTAACTTCAAAGACGATACAAGTCCTCTTGCGTGGGATTGTTCTGCTTGGGTT 420 Query 421 AGAACATACGCGCTCTTTCTAGAAGAGCGGCTTGAATGTTATCGGGTTTTAAAGTATGAC 480 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 421 AGAACATACGCGCTCTTTCTTGAAGAGCGGCTTGAATGTTATCGGGTTTTAAAGTATGAC 480 Query 481 ATCGAGGCAGAGCGTTTACCAAAAGCTTCAGGTGCAGCTTCAAAGACGCATAGAACAAGG 540 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 481 ATCGAGGCAGAGCGTTTACCAAAAGCTTCAGGTGCAGCTTCCAAGACGCATAGAACAAGG 540 Query 541 ATGTTGTCTGGTGAAGATTTGTTAGAACAGTTACCTGCATTGCAACAGCTTCTTTACCGG 600 |||||||||||||||||| | |||||||| ||||| || || |||||||||||||||||| Sbjct 541 ATGTTGTCTGGTGAAGATCTATTAGAACAATTACCCGCGTTACAACAGCTTCTTTACCGG 600 Query 601 CTTATCGGATGTCAGCCTGAAGGAGCAGCTTATAGCAACTATCTAATCCAATATGCTCTT 660 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 601 CTTATCGGATGTCAGCCTGAAGGAGCAGCTTATAGCAACTATCTAATCCAATACGCTCTT 660 Query 661 GCATTGGTGCTTAAAGAAAGCTTCAAAATCTATTGTGCTATAAACGATGGAATCATTAAT 720 |||||||||||||||||||||||||||||||||||||| || || ||||||||||||||| Sbjct 661 GCATTGGTGCTTAAAGAAAGCTTCAAAATCTATTGTGCCATCAATGATGGAATCATTAAT 720 Query 721 CTTGTAGACATGTTCTTTGAGATGTCAAGACATGATGCAGTTAAAGCTCTAAACATATAC 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 721 CTTGTAGACATGTTCTTTGAGATGTCAAGACATGATGCAGTTAAAGCTCTAAACGTATAC 780 Query 781 AAACGGGCTGGTCAACAGGCTGAAAATCTAGCTGAGTTTTATGATTACTGCAAAGGACTA 840 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct 781 AAACGGGCTGGTCAACAGGCTGAAAATCTGGCTGAGTTTTATGATTACTGCAAAGGGCTA 840 Query 841 GAGCTTGCTAGAAACTTTCAGTTCCCAACTTTAAGACAGCCTCCTCCTTCGTTTCTGGCG 900 ||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct 841 GAGCTAGCTAGGAACTTTCAGTTCCCAACCTTAAGACAGCCTCCTCCTTCGTTTCTCGCG 900 Query 901 ACAATGGAAGAGTACATTAAAGAAGCGCCTCAAAGTGGTTCTGTACAGAAAAAGCTGGAG 960 |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct 901 ACAATGGAAGAGTACATTAAAGAAGCGCCTCAGAGTGGTTCTGTACAGAAAAAACTGGAG 960 Query 961 TATCAGgaaaaagaggaagaagaacaagaacaagaagaagaacagcctgaagaaccagca 1020 |||||||||||||||||||||||| ||||||||||| || |||||||||||||| ||| Sbjct 961 TATCAGGAAAAAGAGGAAGAAGAAGAAGAACAAGAACAA---CAGCCTGAAGAACCTGCA 1017 Query 1021 gaagaagaaaaccaaaacgaaaacaccgaaaaTGATCAGCCGCTTATCgaagaagaggaa 1080 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1018 GAAGAAGAAAACCAAAACGAAAACACCGAAAATGATCAGCCGGTTATCGAAGAAGAGGAA 1077 Query 1081 gaagagcctaaagaggagatagaagtggaagaagCTAAACCTTCACCACTGATAGACACT 1140 ||||||||| ||||||||| | ||| |||||||||||||||||||||| ||||||||||| Sbjct 1078 GAAGAGCCTGAAGAGGAGAAAAAAGAGGAAGAAGCTAAACCTTCACCATTGATAGACACT 1137 Query 1141 GATGACTTACTAGG-TCTGCATGAAATAAACCCGAAAGCCGCAGAGATAGAGCAAAACAA 1199 ||||||||||| || | ||||||||||||| || |||||||||||||| ||||||||||| Sbjct 1138 GATGACTTACTGGGAT-TGCATGAAATAAATCCAAAAGCCGCAGAGATTGAGCAAAACAA 1196 Query 1200 CGCATTCTCTCTCGCGATATATCCACCAGGACATGAAACTTCAGCCCCATCTAATAGTCT 1259 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1197 CGCATTCGCTCTCGCGATATATCCACCAGGACATGAAACTTCAGGCCCATCTAATAGTCT 1256 Query 1260 AAGCTTAATAGAAGCAGGGGGAAGTGGTTGGGAACTTGCACTAGTCACACCACAGaacaa 1319 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct 1257 AAGCTTAATAGAAGCTGGAGGAAGTGGTTGGGAACTTGCACTAGTCACACCACAGAACAA 1316 Query 1320 caacaacaa---taacaacaaTCCTCGTCCCGTTATAGCAACAAAACTCGGCGGAGGATT 1376 ||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 1317 CAACAACAACAATAACAACAATCCTCGTCCCGCAATAGCAACAAAACTCGGTGGAGGATT 1376 Query 1377 CGACAATCTTCTACTAGACAGTCTTTACGAAGACGATACAGCAAGAAGACAGATTCAGTT 1436 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| || || Sbjct 1377 CGACAATCTTCTACTAGACAGTCTCTACGAAGACGATACAGCAAGAAGACAGATCCAATT 1436 Query 1437 AACAAACGCCGGTTACGGATTTGGAGCCACGGCTATACCCGGAGCACTAGC-TTCATCGA 1495 |||||||||||||||||||||||||||||| ||||||||||||| || ||| || ||| | Sbjct 1437 AACAAACGCCGGTTACGGATTTGGAGCCACCGCTATACCCGGAGAACCAGCCTT-ATCAA 1495 Query 1496 ACCCAAACCCGTTCGGGGTGCAACAAGATCCTTTCGCAATGTCAAACAACATGGCTCCAC 1555 |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1496 ACCCAAACCCATTCGGGATGCAACAAGATCCTTTCGCAATGTCAAACAACATGGCTCCAC 1555 Query 1556 CAACCAATGTTCAAATGGCAATGCAACAACAACAAATGATGATGATGAATAACCAAAGTC 1615 ||||||| || ||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct 1556 CAACCAACGTCCAAATGGCAATGCAACAACAACAAATGATGATGATGAATAATCGAAGTC 1615 Query 1616 CATATAATAACAACTATTCACCATATCATCATCATCAATTCTCACCAAATCCTTCAACTT 1675 ||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct 1616 CATATAACAACAACTATTCACCTTATCATCATCATCAGTTCTCACCAAATCCTTCAACTT 1675 Query 1676 CTTCATCTCCTAACCCTTTTGGTGACCCTTTCCTTGCTCTCCCAGCTCCTCCTTCATCTA 1735 | ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1676 C---ATCTCCTAATCCTTTTGGTGACCCTTTCCTTGCCCTCCCAGCTCCTCCTTCATCTG 1732 Query 1736 CTACACAGCAGCAATACAGTCCTAATCATATGCTTCTCTAG 1776 |||| ||||| ||| |||||| ||||||||||||||||||| Sbjct 1733 CTACTCAGCAACAACACAGTCATAATCATATGCTTCTCTAG 1773 > Ahg492223 jgi|Araly1|492223|fgenesh2_kg.7__1656__AT4G25940.1 Length=2097 Score = 1419 bits (768), Expect = 0.0 Identities = 1463/1784 (82%), Gaps = 105/1784 (6%) Strand=Plus/Plus Query 1 ATGGGAACG-TTCACGAGCTTTCGAAAAGCCTAT-GGAGCGCTCAAAGATACAACCACCG 58 |||| |||| || || ||||| || |||| || | ||||| |||||||| | || |||| Sbjct 150 ATGGCAACGTTTAAC-AGCTTCCGTAAAG-CTGTCGGAGCAATCAAAGATTCCACTACCG 207 Query 59 TTGGTCTCGCTAAGGTCAACAGCGAATTCAAGGATTTAGATATTGCGATCGTCAAAGCGA 118 | || |||| |||||||||||||||||||||||||| ||| |||||||||| ||||| | Sbjct 208 TAAGTATCGCCAAGGTCAACAGCGAATTCAAGGATTTGGATGTTGCGATCGTTAAAGCCA 267 Query 119 CGAATCATGTTGAATCTCCACCAAAAGAACGTCATGTTCGTAAAATATTCTCGGCGACAT 178 | ||||| || |||||| | || |||||||||||| |||||||||||||||||||||||| Sbjct 268 CAAATCACGTAGAATCTTCTCCCAAAGAACGTCATATTCGTAAAATATTCTCGGCGACAT 327 Query 179 CTGTGA-TACAACCACGAGCAGATGTAGCTTATTGCATTCATGCATTATCTAAAAGATTA 237 |||| | | ||||||||||||||||| ||||| |||||||| |||||| | |||||||| Sbjct 328 CTGT-AGTGCAACCACGAGCAGATGTTGCTTACTGCATTCACGCATTAGCCAAAAGATTG 386 Query 238 TCGAAAACTCGCAATTGGGTTGTTGCAATGAAAGTGTTAATAGTAATTCACAGAACATTA 297 || |||||||||||||||||||| || || || ||||||||||| ||||| |||||| || Sbjct 387 TCAAAAACTCGCAATTGGGTTGTCGCGATCAAGGTGTTAATAGTCATTCATAGAACACTA 446 Query 298 AGAGAAGGTGATCCAACATTTAGAGAAGAGCTTCTAAATTACTCACATAGAAGACATATA 357 |||||||||||||||||||| |||||||||||||| |||||||| |||||| |||||||| Sbjct 447 AGAGAAGGTGATCCAACATTCAGAGAAGAGCTTCTCAATTACTCGCATAGAGGACATATA 506 Query 358 CT-CAGAATATCTAACTTCAAAGATGACACAAGTCCTCTTGCGTGGGATTGTTCTGCTTG 416 || | ||||||| ||||||||||| || |||||||||||||| |||||||| ||||| || Sbjct 507 CTGC-GAATATCGAACTTCAAAGACGATACAAGTCCTCTTGCTTGGGATTGCTCTGCGTG 565 Query 417 GGTTAGAACATACGCGCTCTTTCTAGAAGAGCGGCTTGAATGTTATCGGGTTTTAAAGTA 476 | |||| ||||||||||| ||||| || |||||||||||||| ||||||||||| ||||| Sbjct 566 GATTAGGACATACGCGCTTTTTCTCGAGGAGCGGCTTGAATGCTATCGGGTTTTGAAGTA 625 Query 477 TGACATCGAGGCAGAGCGTTTACCAAAAGCTTCAGGTGCAGCTTC--A-AA----GA--- 526 |||||| || ||||| ||||||||||||| |||||||||| |||| | || || Sbjct 626 TGACATAGAAGCAGAACGTTTACCAAAAGGTTCAGGTGCATCTTCAAAGAACGGGGATTT 685 Query 527 C---G---------C--ATAGAACAAGGATGTTGTCTGGTGAAGATTTGTTAGAACAGTT 572 | | | |||||||||||||| | |||| |||||| || |||||||||| Sbjct 686 CAATGCTTCTCAAACGTATAGAACAAGGATGCTCTCTGATGAAGAACTGCTAGAACAGTT 745 Query 573 ACCTGCATTGCAACAGCTTCTTTACCGGCTTATCGGATGTCAGCCTGAAGGAGCAGCTTA 632 |||||||||||||||||| |||||| ||||||| || |||||||||||||||||||| || Sbjct 746 ACCTGCATTGCAACAGCTGCTTTACAGGCTTATTGGTTGTCAGCCTGAAGGAGCAGCCTA 805 Query 633 TAGCAACTATCTAATCCAATATGCTCTTGCATTGGTGCTTAAAGAAAGCTTCAAAATCTA 692 ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct 806 TAGCAACTACCTAATCCAATACGCTCTTGCATTGGTGCTTAAAGAAAGCTTCAAAATATA 865 Query 693 TTGTGCTATAAACGATGGAATCATTAATCTTGTAGACATGTTCTTTGAGATGTCAAGACA 752 ||||| || || ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 866 CTGTGCCATTAATGATGGAATCATTAATCTTGTAGACATGTTTTTTGAGATGTCAAGACA 925 Query 753 TGATGCAGTTAAAGCTCTAAACATATACAAACGGGCTGGTCAACAGGCTGAAAATCTAGC 812 |||||||||||||||| |||| ||||| ||||| ||||| ||||||||||||||||| || Sbjct 926 TGATGCAGTTAAAGCTTTAAATATATATAAACGAGCTGGCCAACAGGCTGAAAATCTGGC 985 Query 813 TGAGTTTTATGATTACTGCAAAGGACTAGAGCTTGCTAGAAACTTTCAGTTCCCAACTTT 872 ||| ||||| || ||||||||||| |||||||| || ||||||||||||||||| || || Sbjct 986 TGACTTTTACGAGTACTGCAAAGGTCTAGAGCTAGCGAGAAACTTTCAGTTCCCGACCTT 1045 Query 873 AAGACAGCCTCCTCCTTCGTTTCTGGCGACAATGGAAGAGTACATTAAAGAAGCGCCTCA 932 ||||||||||||||||| ||||| | ||||||||||| || ||||||||||| ||||| Sbjct 1046 GAGACAGCCTCCTCCTTCTTTTCTTGTAACAATGGAAGATTATATTAAAGAAGCACCTCA 1105 Query 933 AAGTGGTTCTGTACAGAAAAAGCTGGAGTATCAGgaaaaagagga--a-gaagaacaaga 989 ||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||| Sbjct 1106 AAGTGGTTCTGTACAGAAAAAGCTGGAGTATCAAGAAAAAGAGGAGGAAGAAGAACAAGA 1165 Query 990 acaagaaga--a----gaacagcctgaagaaccagca-gaagaagaaaaccaaaacgaaa 1042 | ||||||| | | ||||| |||||| | | |||| ||||| ||||| || | Sbjct 1166 AGAAGAAGAGCACTCTGCTCAGCCAGAAGAAG-ATAAAGAAGCCGAAAATCAAAATGAGA 1224 Query 1043 acaccgaaa-aTGATCAGCCGCTTATCgaagaagaggaagaagagc-ctaaagaggagat 1100 |||||||| | || |||||||||||||||||||| ||||||||| | || || | || Sbjct 1225 ACACCGAAGGA-GACCAGCCGCTTATCGAAGAAGAAGAAGAAGAGGAC-AACGAAAAAAT 1282 Query 1101 agaagtggaagaagCTAAACCTTCAC-CACTGATAGACACTGATGA-CTTACTAGGTCTG 1158 ||||| ||||| ||||||||||| | ||||||||||||||||| || || || ||| Sbjct 1283 AGAAGAAGAAGATGCTAAACCTTCTTTC-CTGATAGACACTGATGATCTG-CTGGGCCTG 1340 Query 1159 CATGAAATAAACCCGAAAGCCGCAGAGATAGAGCAAAACAACGCATTCTCTCTCGCGATA 1218 |||| |||||||| |||||||||||||||||| | ||| ||||| |||| || ||| Sbjct 1341 AATGAGATAAACCCTAAAGCCGCAGAGATAGAGGACCGCAATGCATTGGCTCTTGCAATA 1400 Query 1219 TATCCACCAGGACATGAAACTTCAGCCCCATCTAATAGTCTAAGCTTAATAGAAGCAGGG 1278 ||||||||||| |||||| || ||| || ||| || ||| |||||||||||||| | || Sbjct 1401 TATCCACCAGGTCATGAAGCTCCAGGCCTATCAAACAGTTTAAGCTTAATAGAAACCGGT 1460 Query 1279 GGAAGTGGTTGGGAACTTGCACTAGTCACACCACAGaacaacaacaacaataacaacaaT 1338 ||| ||||||||||| ||||| ||||| || ||||||||||||||||| ||| | Sbjct 1461 GGATCCGGTTGGGAACTGGCACTGGTCACTCCTCAGAACAACAACAACAA---CAA---T 1514 Query 1339 CCTCGTCCCGTTATAGC-AA-CA--AAACTCGGC-GGAGGATTCGACAATCT-TCTACTA 1392 ||||| ||| | | || || || ||||| | | |||||||| |||||||| | |||| Sbjct 1515 CCTCG-CCC-TG-T-GCCAAACACTAAACTTG-CAGGAGGATTTGACAATCTAT-TACTT 1568 Query 1393 GACAGTCTTTACGAAGACGATACAGCAAGAAGACAGATTCAGTTAACAAACGCCGGTTAC 1452 |||||||| ||||| || ||| |||| || |||||||| || |||| || || || || Sbjct 1569 GACAGTCTGTACGAGGATGATTCAGCTAGGAGACAGATCCAACTAACCAATGCGGGCTAT 1628 Query 1453 GGATTTGGAGCCACGGCTATACCCGGAGCACTAGCTTCATCGAACCCAAACCCGTTCGGG 1512 ||| ||| | || || || | | || ||| || | | || |||||| |||| | Sbjct 1629 GGACATGGTGGCA----TAGACAC--A--AC-AGCACCACC-A-CC-AAACCCATTCGAG 1676 Query 1513 GTGCAACAAGATCCTTTCGCAATGTCAAACAACATGGCTCCACCAACCAATGTTCAAATG 1572 |||||||||||||||| |||||||| |||||||| ||||| ||||| || ||||||||| Sbjct 1677 ATGCAACAAGATCCTTTTGCAATGTCCAACAACATTGCTCCTCCAACTAACGTTCAAATG 1736 Query 1573 GCAATGCAACAACAACA--AAT----GATGATGATGAATA-ACCAAAGTCCATATAATAA 1625 ||||||||||||||||| || ||||||||||| | | || ||||| || ||| Sbjct 1737 GCAATGCAACAACAACAGCAACAACAGATGATGATGA-TGCATCAGAGTCCCTACAATTT 1795 Query 1626 CAACT-ATTCACCATA-TCATCATCATCA--A-TTCTCACCAAATCCTTCAACTTCTTCA 1680 | || || || |||| |||||||||||| | |||||| || |||||| | | | Sbjct 1796 TA-CTCAT-CATCATAATCATCATCATCATCAGTTCTCAGCAGGTCCTTC---T-C--C- 1846 Query 1681 TCTCCTAACCCTTTTGGTGACCCTTTCCTTGCTCTCCCAGCTCC 1724 | || ||| |||||||| |||||||||||||| || ||| |||| Sbjct 1847 T-TC-TAATCCTTTTGGAGACCCTTTCCTTGCCCTTCCACCTCC 1888 > Ahg887320 jgi|Araly1|887320|Al_scaffold_0161_2 Length=1071 Score = 1031 bits (558), Expect = 0.0 Identities = 596/615 (97%), Gaps = 0/615 (0%) Strand=Plus/Plus Query 1 ATGGGAACGTTCACGAGCTTTCGAAAAGCCTATGGAGCGCTCAAAGATACAACCACCGTT 60 ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1 ATGGGAACGTTTACGAGCTTTCGAAAAGCCTATGGAGCACTCAAAGATACAACCACCGTT 60 Query 61 GGTCTCGCTAAGGTCAACAGCGAATTCAAGGATTTAGATATTGCGATCGTCAAAGCGACG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 61 GGTCTCGCTAAGGTCAACAGCGAATTCAAGGATTTAGATATTGCGATCGTCAAAGCAACG 120 Query 121 AATCATGTTGAATCTCCACCAAAAGAACGTCATGTTCGTAAAATATTCTCGGCGACATCT 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 AATCATGTTGAATCTCCACCAAAAGAACGTCATGTTCGTAAAATATTCTCGGCGACATCT 180 Query 181 GTGATACAACCACGAGCAGATGTAGCTTATTGCATTCATGCATTATCTAAAAGATTATCG 240 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 GTGATACAACCAAGAGCAGATGTAGCTTATTGCATTCATGCATTATCTAAAAGATTATCG 240 Query 241 AAAACTCGCAATTGGGTTGTTGCAATGAAAGTGTTAATAGTAATTCACAGAACATTAAGA 300 ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| Sbjct 241 AAAACTCGCAATTGGGTTGTTGCAATGAAGGTGTTGATAGTAATTCACAGAACATTAAGA 300 Query 301 GAAGGTGATCCAACATTTAGAGAAGAGCTTCTAAATTACTCACATAGAAGACATATACTC 360 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 301 GAAGGTGATCCAACATTCAGAGAAGAGCTTCTAAATTACTCACATAGAAGACATATACTC 360 Query 361 AGAATATCTAACTTCAAAGATGACACAAGTCCTCTTGCGTGGGATTGTTCTGCTTGGGTT 420 |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct 361 AGAATATCTAACTTCAAAGACGATACAAGTCCTCTTGCGTGGGATTGTTCTGCTTGGGTT 420 Query 421 AGAACATACGCGCTCTTTCTAGAAGAGCGGCTTGAATGTTATCGGGTTTTAAAGTATGAC 480 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 421 AGAACATACGCGCTCTTTCTTGAAGAGCGGCTTGAATGTTATCGGGTTTTAAAGTATGAC 480 Query 481 ATCGAGGCAGAGCGTTTACCAAAAGCTTCAGGTGCAGCTTCAAAGACGCATAGAACAAGG 540 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 481 ATCGAGGCAGAGCGTTTACCAAAAGCTTCAGGTGCAGCTTCCAAGACGCATAGAACAAGG 540 Query 541 ATGTTGTCTGGTGAAGATTTGTTAGAACAGTTACCTGCATTGCAACAGCTTCTTTACCGG 600 |||||||||||||||||| | |||| ||| ||||| || || |||||||||||||||||| Sbjct 541 ATGTTGTCTGGTGAAGATCTATTAGGACAATTACCCGCGTTACAACAGCTTCTTTACCGG 600 Query 601 CTTATCGGATGTCAG 615 ||| ||||||||||| Sbjct 601 CTTCTCGGATGTCAG 615 Score = 595 bits (322), Expect = 3e-169 Identities = 381/409 (93%), Gaps = 5/409 (1%) Strand=Plus/Plus Query 1369 GGAGGATTCGACAATCTTCTACTAGACAGTCTTTACGAAGACGATACAGCAAGAAGACAG 1428 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 667 GGAGGATTCGACAATCTTCTACTAGACAGTCTCTACGAAGACGATACAGCAAGAAGACAG 726 Query 1429 ATTCAGTTAACAAACGCCGGTTACGGATTTGGAGCCACGGCTATACCCGGAGCACTAG-C 1487 || || |||||||||||||||||||||||||||||||| ||||||||||||| || || | Sbjct 727 ATCCAATTAACAAACGCCGGTTACGGATTTGGAGCCACCGCTATACCCGGAGAACCAGCC 786 Query 1488 TTCATCGAACCCAAACCCGTTCGGGGTGCAACAAGATCCTTTCGCAATGTCAAACAACAT 1547 || ||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||| Sbjct 787 TT-ATCAAACCCAAACCCATTCGGGATGCAACAAGATCCTTTCGCAATGTCAAACAACAT 845 Query 1548 GGCTCCACCAACCAATGTTCAAATGGCAATGCAACAACAACAAATGATGATGATGAATAA 1607 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct 846 GGCTCCACCAACCAACGTCCAAATGGCAATGCAACAACAACAAATGATGATGATGAATAA 905 Query 1608 CCAAAGTCCATATAATAACAACTATTCACCATATCATCATCATCAATTCTCACCAAATCC 1667 | |||||||||||| |||||||||||||| |||||||||||||| |||||||||||||| Sbjct 906 TCGAAGTCCATATAACAACAACTATTCACCTTATCATCATCATCAGTTCTCACCAAATCC 965 Query 1668 TTCAACTTCTTCATCTCCTAACCCTTTTGGTGACCCTTTCCTTGCTCTCCCAGCTCCTCC 1727 ||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct 966 TTCAACTTC---ATCTCCTAATCCTTTTGGTGACCCTTTCCTTGCCCTCCCAGCTCCTCC 1022 Query 1728 TTCATCTACTACACAGCAGCAATACAGTCCTAATCATATGCTTCTCTAG 1776 ||||||| |||| ||||| ||| |||||| ||||||||||||||||||| Sbjct 1023 TTCATCTGCTACTCAGCAACAACACAGTCATAATCATATGCTTCTCTAG 1071 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 66657928750 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5