BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G57850.1 Length=1419 Score E Sequences producing significant alignments: (Bits) Value Ahg332076 jgi|Araly1|332076|fgenesh1_pm.C_scaffold_8001419 1352 0.0 > Ahg332076 jgi|Araly1|332076|fgenesh1_pm.C_scaffold_8001419 Length=891 Score = 1352 bits (732), Expect = 0.0 Identities = 839/892 (94%), Gaps = 2/892 (0%) Strand=Plus/Plus Query 272 ATGTACTCAAGTGTTGTTGATGGAATTACAACCGATCCAGCAGCGATGGTTCTTCCATTG 331 |||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||| Sbjct 1 ATGTACTCAAGTGTTGTTGATGGAATAACAACTGATCCAGCAGCAATGGTTCTTCCATTG 60 Query 332 GATGATCACATGGTTCACCGTGGTCATGGAGTCTTTGACACTGCCCTGATCATCAATGGA 391 ||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||| Sbjct 61 GATGATCACATGGTTCACCGTGGTCATGGAGTCTTTGACACTGCCATTATCATTAATGGA 120 Query 392 TACCTTTATGAATTGGATCAGCACCTTGACCGTATCTTGCGATCTGCATCAATGGCTAAG 451 |||||||||||||||||||||||||||||||||||| | |||||||| || ||||||||| Sbjct 121 TACCTTTATGAATTGGATCAGCACCTTGACCGTATCCTACGATCTGCGTCCATGGCTAAG 180 Query 452 ATCCCACTTCCATTCGATCGAGAAACTATTAAAAGAATTCTCATTCAAACCGTGAGCGTT 511 ||||||||||||||||||||||||||||||||||| |||||||| || || ||||||||| Sbjct 181 ATCCCACTTCCATTCGATCGAGAAACTATTAAAAGGATTCTCATCCAGACTGTGAGCGTT 240 Query 512 TCTGGATGTAGAGATGGATCTCTAAGATACTGGCTCTCTGCAGGGCCAGGGGATTTCCTC 571 ||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||| Sbjct 241 TCTGGTTGTAGAGATGGCTCTCTAAGATACTGGCTCTCTGCAGGCCCAGGGGATTTCCTC 300 Query 572 CTATCTCCATCTCAATGTCTCAAACCAACTCTCTATGCCATTGTTATAAAAACGAACTTC 631 ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| || Sbjct 301 CTATCTCCATCTCAATGTCTCAAACCAACTCTCTACGCCATTGTGATAAAAACGAAGTTG 360 Query 632 GCCATTAACCCAATAGGTGTCAAGGTAGTGACCTCGTCCATCCCCATAAAGCCTCCAGAG 691 ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 361 GCCATTAACCCAACAGGTGTCAAGGTAGTGACCTCGTCCATTCCCATAAAGCCTCCAGAG 420 Query 692 TTTGCCACGGTGAAAAGTGTTAACTACCTCCCTAACGTACTCTCACAAATGGAAGCTGAG 751 ||||| || |||||||| |||||||||||||||||||| ||||| |||||||| |||||| Sbjct 421 TTTGCGACAGTGAAAAGCGTTAACTACCTCCCTAACGTGCTCTCTCAAATGGAGGCTGAG 480 Query 752 GCCAAAGGAGCTTATGCAGGTATTTGGGTGTGTAAAGATGGGTTTATTGCAGAAGGCCCG 811 ||||| |||||||||||||||||||||||| || |||||||||||||||||||||| ||| Sbjct 481 GCCAACGGAGCTTATGCAGGTATTTGGGTGAGTGAAGATGGGTTTATTGCAGAAGGTCCG 540 Query 812 AACATGAATGTGGCGTTTGTTGTTAATGGTGGTAAGGAGCTTGTGATGCCGCGGTTTGAT 871 |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 541 AACATGAATGTGGCATTTGTTGTTAATGGTGGCAAGGAGCTTGTGATGCCGCGGTTTGAT 600 Query 872 AACGTTTTGAGCGGATGTACAGCAAAGAGAACACTTACACTCGCTGAACAGCTTGTAAGC 931 |||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||| Sbjct 601 AACGTTTTGAGCGGATGTACAGCAAAGAGAACGCTTACACTCGTTGAACAGCTTTTAAGC 660 Query 932 AAGGGGATTCTTAAAACTGTGAAAGTAATGGATGTGACAGTCGAAGATGGAAAGAAAGCA 991 |||||||| ||||||| ||||||||||||| || |||||||||||||||||||||||||| Sbjct 661 AAGGGGATGCTTAAAAGTGTGAAAGTAATGAATATGACAGTCGAAGATGGAAAGAAAGCA 720 Query 992 GATGAGATGATGCTTATTGGTAGTGGAATTC-CGATCAGACCTGTGATTCAATGGGATGA 1050 ||||||||||||||||||||||| ||| ||| | |||||||||||||||||||||||||| Sbjct 721 GATGAGATGATGCTTATTGGTAGCGGAGTTCTC-ATCAGACCTGTGATTCAATGGGATGA 779 Query 1051 AGAATTTATTGGTGAAGGAAAAGAAGGTCCTATAGCAAAGGCGCTTCTTGATCTGTTACT 1110 |||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct 780 AGAACTTATTGGTGATGGAAAAGAAGGTCCTATAGCAAAGGCACTTCTTGATCTGTTACT 839 Query 1111 TGAAGATATGAGATCTGGTCCACCTTCCGTTCGTGTTCTTGTTCCTTACTGA 1162 |||||||||||||||||| |||||||| |||||||||||| |||| |||||| Sbjct 840 TGAAGATATGAGATCTGGACCACCTTCTGTTCGTGTTCTTATTCCATACTGA 891 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 53059711285 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5