BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G57890.1 Length=1120 Score E Sequences producing significant alignments: (Bits) Value Ahg472860 jgi|Araly1|472860|fgenesh2_kg.1__2814__AT5G57890.1 1345 0.0 Ahg484144 jgi|Araly1|484144|fgenesh2_kg.5__136__AT1G25220.1 1343 0.0 Ahg900162 jgi|Araly1|900162|Al_scaffold_0004_812 1153 0.0 Ahg484723 jgi|Araly1|484723|fgenesh2_kg.5__715__AT1G25220.1 525 3e-148 Ahg484722 jgi|Araly1|484722|fgenesh2_kg.5__714__AT5G57890.1 470 1e-131 Ahg887377 jgi|Araly1|887377|Al_scaffold_0358_2 459 3e-128 > Ahg472860 jgi|Araly1|472860|fgenesh2_kg.1__2814__AT5G57890.1 Length=980 Score = 1345 bits (728), Expect = 0.0 Identities = 856/914 (94%), Gaps = 23/914 (3%) Strand=Plus/Plus Query 58 ATGGCGGCTACTACATTGTACAATTCCTGTCTTCTTCAACCGAAGTATGGCTTCACCACT 117 ||||||||||||||| | ||||| || |||||||||||||| |||| | ||| ||||||| Sbjct 1 ATGGCGGCTACTACACTATACAAGTCTTGTCTTCTTCAACCCAAGTCTAGCTCCACCACT 60 Query 118 CGCCGCCTAAACCAGTCTCTCGTTAACTCTCTTACGAACCCAACAAGAGTTTCGGTTTTG 177 || | ||||||| ||||| |||||| |||||||||| || |||||||||||||||||| Sbjct 61 CG--G-CTAAACCCTTCTCTTGTTAACCCTCTTACGAATCCGACAAGAGTTTCGGTTTTG 117 Query 178 TGGAAGAGTCGTAGAGATGT-TATTGCGAAAGCTTCGATTGAAATGGCGGAATCGAATTC 236 ||||||||||||||||||| | ||||||||||||| ||||||||||||||||| ||||| Sbjct 118 GGGAAGAGTCGTAGAGATGTCT-TTGCGAAAGCTTCTATTGAAATGGCGGAATCAAATTC 176 Query 237 GATATCTTCCGTTGTTGTCAATT-C-CT---C----------TGGTCCTATCATCGTGAT 281 |||| |||||||||||||||||| | || | |||||||||||||||||| Sbjct 177 GATACCTTCCGTTGTTGTCAATTCCTCTAAGCAGAATGGTTATGGTCCTATCATCGTGAT 236 Query 282 TGATAATTACGACAGCTTCACTTACAATCTCTGCCAGTATATGGGAGAGCTAGGGTGCCA 341 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 237 TGATAATTACGACAGCTTCACTTACAATCTCTGCCAGTATATGGGAGAGCTAGGATGCCA 296 Query 342 TTTTGAAGTTTACCGCAATGATGAACTTACAGTTGAGGAGCTGAAAAGA-AAAAAGCCAA 400 ||||||||||||||||||||||||||||||||| ||||||||||||| | ||||| |||| Sbjct 297 TTTTGAAGTTTACCGCAATGATGAACTTACAGTAGAGGAGCTGAAAA-ATAAAAATCCAA 355 Query 401 GAGGATTGTTGATTTCTCCTGGACCTGGTACCCCTCAAGACTCTGGGATTTCCTTGCAAA 460 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 356 GAGGAGTGTTGATTTCTCCTGGACCTGGTACCCCTCAAGACTCTGGGATTTCCTTGCAAA 415 Query 461 CTGTTTTGGAACTCGGACCACTTGTTCCTTTATTTGGAGTATGTATGGGTTTGCAGTGTA 520 ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| Sbjct 416 CTGTTTTGGAACTCGGACCACGTGTTCCTTTATTTGGAGTATGCATGGGTTTGCAGTGTA 475 Query 521 TAGGAGAAGCATTTGGAGGAAAGATTGTGCGGTCACCATTTGGTGTTATGCATGGGAAAA 580 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 476 TAGGAGAAGCATTTGGAGGAAAGATTGTGCGGTCACCATTTGGTGTTATGCATGGGAAAA 535 Query 581 GCTCAATGGTTCACTATGATGAGAAAGGAGAAGAAGGCTTGTTCTCTGGATTATCCAACC 640 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 536 GCTCAATGGTTTACTATGATGAGAAAGGAGAAGAAGGCTTGTTCTCTGGATTATCCAACC 595 Query 641 CTTTCCTTGTAGGTAGATATCACAGTCTCGTGATCGAAAAAGATTCATTTCCTAGTGATG 700 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 596 CTTTCCTTGTAGGTAGATATCACAGCCTCGTGATCGAAAAAGATTCATTTCCTAGTGATG 655 Query 701 AACTCGAGGTTACAGCATGGACAGAAGATGGTCTGGTTATGGCTGCCCGTCACAGAAAGT 760 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 656 AACTCGAGGTTACAGCATGGACAGAAGATGGTCTGGTTATGGCTGCCCGTCACAGGAAGT 715 Query 761 ACAAGCATATACAGGGAGTTCAATTTCATCCGGAGAGTATTATAACAACCGAAGGCAAGA 820 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 716 ATAAGCATATACAGGGAGTTCAATTTCATCCGGAGAGTATTATAACAACCGAAGGCAAGA 775 Query 821 CAATTGTTCGCAATTTCATCAAACTCGTAGAGAAAAAGGAATCTGAGAAGCTGGCATAGG 880 ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 776 CAATTGTCCGCAATTTCATCAAACTCGTAGAGAAAAAGGAATCTGAGAAGCTGACATAGA 835 Query 881 CTTAGCCTGAATGAGAAAATCAGCTGTGTTCGATTAGTGCTTCCCTGTAATAATGTCTGC 940 || ||||||||||||||||||||||||||| ||||||| | ||||||||||||||| ||| Sbjct 836 CT-AGCCTGAATGAGAAAATCAGCTGTGTTTGATTAGTACCTCCCTGTAATAATGTTTGC 894 Query 941 CAATGCAAAATGTT 954 |||||||||||||| Sbjct 895 CAATGCAAAATGTT 908 > Ahg484144 jgi|Araly1|484144|fgenesh2_kg.5__136__AT1G25220.1 Length=1004 Score = 1343 bits (727), Expect = 0.0 Identities = 877/946 (93%), Gaps = 24/946 (3%) Strand=Plus/Plus Query 54 AACAATGGCGGCTACTACATTGTACAATTCCTGTCTTCTTCAACCGAAGTATGGCTTCAC 113 ||||||||||||||||||| || ||| || |||||||||||||| |||| ||||| ||| Sbjct 17 AACAATGGCGGCTACTACACAGTTCAAGTCTTGTCTTCTTCAACCTAAGTCTGGCTCCAC 76 Query 114 CACTCGCCGCCTAAACCAGTCTCTCGTTAACT-CTCTTACGAACCCAACAAGAGTTTCGG 172 ||||||||| ||||||| ||||||||||| | |||||||||| || ||||||||||||| Sbjct 77 CACTCGCCGACTAAACCCTTCTCTCGTTAA-TCCTCTTACGAATCCGACAAGAGTTTCGG 135 Query 173 TTTTGTGGAAGAGTCGTAGAGATGT-TATTGCGAAAGCTTCGATTGAAATGGCGGAATCG 231 ||||| ||||||||||||||||||| | |||||||||||||||| ||||||||||||||| Sbjct 136 TTTTGGGGAAGAGTCGTAGAGATGTGT-TTGCGAAAGCTTCGATGGAAATGGCGGAATCG 194 Query 232 AATTCGATATCTTCCGTTGTTGTCAATT-C-CT---C----TGGTCCTATCATCGTGATT 282 ||||||||| |||||||||||||||||| | || | ||||||||||||||| ||| Sbjct 195 AATTCGATACCTTCCGTTGTTGTCAATTCCTCTAAGCAGAATGGTCCTATCATCGTCATT 254 Query 283 GATAATTACGACAGCTTCACTTACAATCTCTGCCAGTATATGGGAGAGCTAGGGTGCCAT 342 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 255 GATAATTACGACAGCTTCACTTACAATCTCTGCCAGTATATGGGAGAGCTAGGATGCCAT 314 Query 343 TTTGAAGTTTACCGCAATGATGAACTTACAGTTGAGGAGCTGAAAAGAAAAAAGCCAAGA 402 || ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct 315 TTCGAAGTTTACCGCAATGATGAACTTACAGTAGAGGAGCTGAAAAGAAAAAATCCAAGA 374 Query 403 GGATTGTTGATTTCTCCTGGACCTGGTACCCCTCAAGACTCTGGGATTTCCTTGCAAACT 462 || | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 375 GGGGTATTGATTTCTCCTGGACCTGGTACCCCTCAAGACTCTGGGATTTCCTTGCAAACC 434 Query 463 GTTTTGGAACTCGGACCACTTGTTCCTTTATTTGGAGTATGTATGGGTTTGCAGTGTATA 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 435 GTTTTGGAACTCGGACCACTTGTTCCTTTATTTGGAGTATGTATGGGTTTGCAGTGTATA 494 Query 523 GGAGAAGCATTTGGAGGAAAGATTGTGCGGTCACCATTTGGTGTTATGCATGGGAAAAGC 582 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 495 GGAGAAGCATTTGGAGGAAAGATTGTGCGGGCACCATTTGGTGTTATGCATGGGAAAAGC 554 Query 583 TCAATGGTTCACTATGATGAGAAAGGAGAAGAAGGCTTGTTCTCTGGATTATCCAACCCT 642 |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct 555 TCAATGGTTCACTATGATGAGAAAGGAGAAGAAGGCTTGTTCTCTGGACAATCTAACCCT 614 Query 643 TTCCTTGTAGGTAGATATCACAGTCTCGTGATCGAAAAAGATTCATTTCCTAGTGATGAA 702 ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct 615 TTCCTTGTAGGTAGATATCACAGCCTCGTTATCGAAAAAGATTCATTTCCTAGTGATGAA 674 Query 703 CTCGAGGTTACAGCATGGACAGAAGATGGTCTGGTTATGGCTGCCCGTCACAGAAAGTAC 762 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 675 CTCGAGGTTACAGCATGGACAGAAGATGGTCTGGTTATGGCTGCCCGTCACAGGAAGTAC 734 Query 763 AAGCATATACAGGGAGTTCAATTTCATCCGGAGAGTATTATAACAACCGAAGGCAAGACA 822 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct 735 AAGCATATACAGGGAGTTCAATTTCATCCGGAGAGTATTATAACAACTGAAGGCAAAACA 794 Query 823 ATTGTTCG-CAATTTCATCAAACTCGTAGAGAAAAAGGAATCTGAGAAGCTGGCATAGGC 881 ||||| || ||| |||||||||||||||||||||||||||||||||||| || ||||| | Sbjct 795 ATTGT-CGGCAACTTCATCAAACTCGTAGAGAAAAAGGAATCTGAGAAGTTGACATAGAC 853 Query 882 TTAGCCTGAATGAGAAA--A--T---CAGCTGTGTTCGATTAGTGCTTCCCTGTAATAAT 934 || |||||||||||||| | | ||| |||||||||||||||| ||| ||||||||| Sbjct 854 TTCGCCTGAATGAGAAATCAGCTAATCAGTTGTGTTCGATTAGTGCCTCCGTGTAATAAT 913 Query 935 GTCTGCCAATGCAAAATGTTCCTTGGCATCTT-ACCATTGTTTCTA 979 || ||| |||||||||||||||||| |||||| || |||||||||| Sbjct 914 GTTTGCTAATGCAAAATGTTCCTTGTCATCTTCAC-ATTGTTTCTA 958 > Ahg900162 jgi|Araly1|900162|Al_scaffold_0004_812 Length=828 Score = 1153 bits (624), Expect = 0.0 Identities = 769/836 (92%), Gaps = 22/836 (3%) Strand=Plus/Plus Query 58 ATGGCGGCTACTACATTGTACAATTCCTGTCTTCTTCAACCGAAGTATGGCTTCACCACT 117 ||||||||||||||| || ||| || |||||||||||||| |||| | ||| ||||||| Sbjct 1 ATGGCGGCTACTACACAGTTCAAGTCTTGTCTTCTTCAACCCAAGTCTAGCTCCACCACT 60 Query 118 CGCCGCCTAAACCAGTCTCTCGTTAACT-CTCTTACGAACCCAACAAGAGTTTCGGTTTT 176 ||||| ||||||| ||||||||||| | |||||||||| | ||||||||||||||||| Sbjct 61 CGCCGACTAAACCCTTCTCTCGTTAA-TCCTCTTACGAATTCGACAAGAGTTTCGGTTTT 119 Query 177 GTGGAAGAGTCGTAGAGATGT-TATTGCGAAAGCTTCGATTGAAATGGCGGAATCGAATT 235 | |||||||| |||||||||| | ||||||| |||||||| ||||||||||||||||||| Sbjct 120 GGGGAAGAGTAGTAGAGATGTCT-TTGCGAAGGCTTCGATGGAAATGGCGGAATCGAATT 178 Query 236 CGATATCTTCCGTTGTTGTCAATT-C-CT---C----TGGTCCTATCATCGTGATTGATA 286 ||||| ||||| |||||||||| | || | ||||||||||||||||||||||| Sbjct 179 CGATACCTTCC---GTTGTCAATTCCTCTAAGCAGAATGGTCCTATCATCGTGATTGATA 235 Query 287 ATTACGACAGCTTCACTTACAATCTCTGCCAGTATATGGGAGAGCTAGGGTGCCATTTTG 346 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct 236 ATTACGACAGCTTCACTTACAATCTCTGCCAGTATATGGGAGAGCTAGGATGCCATTTCG 295 Query 347 AAGTTTACCGCAATGATGAACTTACAGTTGAGGAGCT-GAAAAGAAAAAAGCCAAGAGGA 405 |||||||||||||||||||||||||| | |||||||| |||| ||||||| |||||||| Sbjct 296 AAGTTTACCGCAATGATGAACTTACAATAGAGGAGCTTGAAA-GAAAAAATCCAAGAGGG 354 Query 406 TTGTTGATTTCTCCTGGACCTGGTACCCCTCAAGACTCTGGGATTTCCTTGCAAACTGTT 465 | || |||||||||||||||||||| |||||||||||||||||||| |||||||| ||| Sbjct 355 GTATTAATTTCTCCTGGACCTGGTACACCTCAAGACTCTGGGATTTCTTTGCAAACCGTT 414 Query 466 TTGGAACTCGGACCACTTGTTCCTTTATTTGGAGTATGTATGGGTTTGCAGTGTATAGGA 525 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 415 TTGGAACTCGGACCATTTGTTCCTTTATTTGGAGTATGTATGGGTTTGCAGTGTATAGGA 474 Query 526 GAAGCATTTGGAGGAAAGATTGTGCGGTCACCATTTGGTGTTATGCATGGGAAAAGCTCA 585 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 475 GAAGCATTTGGAGGAAAGATTGTGCGGGCACCATTTGGTGTTATGCATGGGAAAAGCTCA 534 Query 586 ATGGTTCACTATGATGAGAAAGGAGAAGAAGGCTTGTTCTCTGGATTATCCAACCCTTTC 645 ||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||| Sbjct 535 ATGGTACACTATGATGAGAAAGGAGAAGAAGGCTTGTTCTCTGGACTATCTAACCCTTTC 594 Query 646 CTTGTAGGTAGATATCACAGTCTCGTGATCGAAAAAGATTCATTTCCTAGTGATGAACTC 705 |||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||| Sbjct 595 CTTGTAGGTAGATATCACAGCCTCGTTATCGAAAAAAATTCATTTCCTAGTGATGAACTC 654 Query 706 GAGGTTACAGCATGGACAGAAGATGGTCTGGTTATGGCTGCCCGTCACA-GAAAGTACAA 764 ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| Sbjct 655 GAGGTTACAGCATGGACAGAAGATGGTCTGGTTATGGCTGCCCGTCACAAGAAA-TACAA 713 Query 765 GCATATACAGGGAGTTCAATTTCATCCGGAGAGTATTATAACAACCGAAGGCAAGACAAT 824 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct 714 GCATATACAGGGAGTTCAATTTCATCCGGAGAGTATTATAACAACTGAAGGCAAAACAAT 773 Query 825 TGTTCG-CAATTTCATCAAACTCGTAGAGAAAAAGGAATCTGAGAAGCTGGCATAG 879 ||| || ||| |||||||||||||||||||||||||||||||||||| || ||||| Sbjct 774 TGT-CGGCAACTTCATCAAACTCGTAGAGAAAAAGGAATCTGAGAAGTTGACATAG 828 > Ahg484723 jgi|Araly1|484723|fgenesh2_kg.5__715__AT1G25220.1 Length=933 Score = 525 bits (284), Expect = 3e-148 Identities = 375/418 (90%), Gaps = 10/418 (2%) Strand=Plus/Plus Query 539 GAAAGATTGTGCGGTCACCATTTGGTGTTATGCATGGGAAAAGCTCAATGGTTCACTATG 598 |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| Sbjct 493 GAAAGATTGTGCGGTCACTATTTGGTGTTATGCATAGGAAAAGCTCAATGGTTCACTATG 552 Query 599 ATGAGAAAGGAGAAGAAGGCTTGTTCTCTGGATTATCCAACCCT-TTCCT-TG-TAGGTA 655 ||||||||||| || || ||||||||||| |||||||||| | | | | | || Sbjct 553 ATGAGAAAGGAAAATAATGCTTGTTCTCTAGATTATCCAA--GTATAAATCAGATTTGTT 610 Query 656 GATATCACAGTCTCGTGATCGAAAAAGATTCATTTCCTAGTGATGAACTCGAGGTTACAG 715 ||||||||| ||||| ||||||||||||||||| ||||||| ||||||||||||||||| Sbjct 611 TATATCACAGCCTCGTCATCGAAAAAGATTCATTCCCTAGTGGTGAACTCGAGGTTACAG 670 Query 716 CATGGACAGAAGATGGTCTGGTTATGGCTGCCCGTCACA-GAAAGTACAAGCATATACAG 774 ||||||||| ||||||||||||||||||| || |||||| | ||||| | ||||||||| Sbjct 671 CATGGACAGCAGATGGTCTGGTTATGGCTTCCTGTCACATG-AAGTATAGGCATATACAA 729 Query 775 GGAGTTCAATTTCATCCGGAGAGTATTATAACAACCGAAGGCAAGACAATTGTTC-GCAA 833 ||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||| Sbjct 730 GGAGTTCAATTTCATCCGGAGAGTATTATAACAACTGAAGGCAAGACAATTG-TCTGCAA 788 Query 834 TTTCATCAAACTCGTAGAGAAAAAGGAATCTGAGAAGCTGGCATAGGCTTAGCCTGAATG 893 |||||||||||||||||||||||||||||||||||||||| ||||| || || ||| ||| Sbjct 789 TTTCATCAAACTCGTAGAGAAAAAGGAATCTGAGAAGCTGACATAGACT-AGTCTGGATG 847 Query 894 AGAAAATCAGCTGTGTTCGATTAGTGCTTCCCTGTAATAATGTCTGCCAATGCAAAAT 951 ||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||| Sbjct 848 AGAAAATCAGCTGTGTTTGATTAGTTCCTCCCTGTAATAATGTCTGCCAATGCAAAAT 905 Score = 359 bits (194), Expect = 3e-98 Identities = 342/407 (84%), Gaps = 35/407 (9%) Strand=Plus/Plus Query 164 GAGTTTCGGTTTTGTGGAAGAGTCGTAGAGATGT-TATTGCGAAAGCTTCGATTGAAATG 222 |||||||||||||| ||||||||||||||||||| | |||| |||| ||||||||||||| Sbjct 56 GAGTTTCGGTTTTGGGGAAGAGTCGTAGAGATGTCT-TTGCAAAAGATTCGATTGAAATG 114 Query 223 GCGGAATCGAATTCGATATCTTCCGTTGTTGTCAATT-C-CT---C----TGGTCCTATC 273 |||||||||||||||| | |||| ||| ||||||||| | || | |||| ||||| Sbjct 115 GCGGAATCGAATTCGACACCTTCTGTTTTTGTCAATTCCTCTAAGCAGAATGGTTCTATC 174 Query 274 ATCGTGATTGATAATTACGACAGCTTCACTTACAATCTCTGCC--A-----GT--A---- 320 ||||||||||||||||||||||||||| ||||||||||||||| | | | Sbjct 175 ATCGTGATTGATAATTACGACAGCTTCGCTTACAATCTCTGCCATATTTTTTTCAATTTT 234 Query 321 -TA---TG-GGAGAG-CTAGGGTGCC-ATTTTGAAGTTTACCGCAATGATGAACTTACAG 373 || || | | | ||| |||| | |||||||||||||||||| |||||||||||| Sbjct 235 TTATTTTGTTTCG-GTCAAGGATGCCGA-TTTGAAGTTTACCGCAATTATGAACTTACAG 292 Query 374 TTGAGGAGCTGAAAAGA-AAAAAGCCAAGAGGATTGTTGATTTCTCCTGGACCTGGTACC 432 | ||||||||||||| | ||||| ||||||| | |||||||||||||||||||||||||| Sbjct 293 TAGAGGAGCTGAAAA-ATAAAAATCCAAGAGTAATGTTGATTTCTCCTGGACCTGGTACC 351 Query 433 CCTCAAGACTCTGGGATTTCCTTGCAAACTGTTTTGGAACTCGGACCACTTGTTCCTTTA 492 ||||||||||||||||||| ||| ||||| |||||| |||| ||||| | |||| ||||| Sbjct 352 CCTCAAGACTCTGGGATTTTCTTTCAAACAGTTTTGAAACTTGGACCTCGTGTTTCTTTA 411 Query 493 TTTGGAGTATGTATGGGTTTGCAGTGTATAGGAGAAGCATTTGGAGG 539 ||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 412 TTTGGAGTATGTATGAATTTGCAGTGTATAGGAGAAGCATTTGGAGG 458 > Ahg484722 jgi|Araly1|484722|fgenesh2_kg.5__714__AT5G57890.1 Length=825 Score = 470 bits (254), Expect = 1e-131 Identities = 325/358 (91%), Gaps = 9/358 (3%) Strand=Plus/Plus Query 524 GAGAAGCATTTGGAGGAAAGATTGTGCGGTCACCATTTGGTGTTATGCATGGGAAAAGCT 583 ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 475 GAGAAGCATTTAGAGGAAAGATTGTGCGGTCACTATTTGGTGTTATGCATGGGAAAAGCT 534 Query 584 CAATGGTTCACTATGATGAGAAAGGAGAAGAAGGCTTGTTCTCTGGATTATCCAACCCTT 643 |||||||||||||||||||||||||| || || |||| | | | | || | ||||| Sbjct 535 CAATGGTTCACTATGATGAGAAAGGAAAATAATGCTT-AT-T-T-GTTTGT-GTTCCCTT 589 Query 644 TCCTTGTAGGTAGATATCACAGTCTCGTGATCGAAAAAGATTCATTTCCTAGTGATGAAC 703 || ||||| ||||||||||||| ||||| ||||||||||||||||| ||||||| ||||| Sbjct 590 TCTTTGTAAGTAGATATCACAGCCTCGTCATCGAAAAAGATTCATTCCCTAGTGGTGAAC 649 Query 704 TCGAGGTTACAGCATGGACAGAAGATGGTCTGGTTATGGCTGCCCGTCACA-GAAAGTAC 762 ||||||||||||||||||||| ||||||||||||||||||| || |||||| | ||||| Sbjct 650 TCGAGGTTACAGCATGGACAGCAGATGGTCTGGTTATGGCTTCCTGTCACATG-AAGTAT 708 Query 763 AAGCATATACAGGGAGTTCAATTTCATCCGGAGAGTATTATAACAACCGAAGGCAAGACA 822 ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 709 AAGCATATACAAGGAGTTCAATTTCATCCGGAGAGTATTATAACAACTGAAGGCAAGACA 768 Query 823 ATTGTTC-GCAATTTCATCAAACTCGTAGAGAAAAAGGAATCTGAGAAGCTGGCATAG 879 |||| || |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 769 ATTG-TCTGCAATTTCATCAAACTCGTAGAGAAAAAGGAATCTGAGAAGCTGACATAG 825 Score = 405 bits (219), Expect = 3e-112 Identities = 383/456 (84%), Gaps = 36/456 (8%) Strand=Plus/Plus Query 55 ACAATGGCGGCTACTACATTGTACAATTCCTGTCTTCTTCAACCGAAGTATGGCTT-CAC 113 ||||||| |||||||||| ||||||| | |||||||||||||| |||| ||| || ||| Sbjct 20 ACAATGGTGGCTACTACACTGTACAAGT-ATGTCTTCTTCAACCCAAGTCTGG-TTCCAC 77 Query 114 CACTCGCCGCCTAAACCAGTCTCTCGTTAACTCTCTTACGAACCCAACAAGAGTTTCGGT 173 ||||| | ||||||||| |||||||||||| || ||||||| || |||||||||||||| Sbjct 78 CACTCACTGCCTAAACCCTTCTCTCGTTAACCCTTTTACGAATCCGACAAGAGTTTCGGT 137 Query 174 TTTGTGGAAGAGTCGTAGAGATGT-TATTGCGAAAGCTTCGATTGAAATGGCGGAATCGA 232 |||| ||||||||||||||||||| | |||| |||| ||||||||||||||||||||||| Sbjct 138 TTTGGGGAAGAGTCGTAGAGATGTCT-TTGCAAAAGATTCGATTGAAATGGCGGAATCGA 196 Query 233 ATTCGATATCTTCCGTTGTTGTCAATTCCTCT--G--G--TC---CTATCATCGTGATTG 283 |||||| | |||||||| |||||||||||||| | | | ||||||||||||||| Sbjct 197 ATTCGACACCTTCCGTTTTTGTCAATTCCTCTAAGCAGAATGGTTCTATCATCGTGATTG 256 Query 284 ATAATTACGACAGCTTCACTTACAATCTCTGCCAG-T-------A-T-----ATGG-GA- 327 ||||||||||||||||| |||||||||||||||| | | | || | Sbjct 257 ATAATTACGACAGCTTCGCTTACAATCTCTGCCATATTTTTTTCAATTTTTTATTCTGTT 316 Query 328 --GAGCTAGGGTGCC-ATTTTGAAGTTTACCGCAATGATGAACTTACAGTTGAGGAGCTG 384 |||||||| |||| |||| ||||||||||||||| ||||||||||||| ||||||||| Sbjct 317 TCGAGCTAGGATGCCGATTT-GAAGTTTACCGCAATTATGAACTTACAGTAGAGGAGCTG 375 Query 385 AAAAGA-AAAAAGCCAAGAGGATTGTTGATTTCTCCTGGACCTGGTACCCCTCAAGACTC 443 |||| | ||||| ||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct 376 AAAA-ATAAAAATCCAAGAGTAATGTTGATTTCTCCTGGACCTGGTACCCCTCAAGACTC 434 Query 444 TGGGATTTCCTTGCAAACTGTTTTGGAACTCGGACC 479 |||||||| ||| ||||| |||||| |||| ||||| Sbjct 435 TGGGATTTTCTTTCAAACAGTTTTGAAACTTGGACC 470 > Ahg887377 jgi|Araly1|887377|Al_scaffold_0358_2 Length=429 Score = 459 bits (248), Expect = 3e-128 Identities = 342/384 (89%), Gaps = 19/384 (5%) Strand=Plus/Plus Query 58 ATGGCGGCTACTACATTGTACAATTCCTGTCTTCTTCAACCGAAGTATGGCTTCACCACT 117 ||||||||||||||| |||||| || |||||||||||||| |||| ||||| ||||||| Sbjct 1 ATGGCGGCTACTACACAGTACAAGTCTTGTCTTCTTCAACCTAAGTCTGGCTCCACCACT 60 Query 118 CGCCGCCTAAACCAGTCTCTCGTTAACT-CTCTTACGAACCCAACAAGAGTTTCGGTTTT 176 ||||| ||||||| ||||||||||| | |||||||||| || || |||||||||||| Sbjct 61 CGCCGACTAAACCCTTCTCTCGTTAA-TCCTCTTACGAATCCGAC---AGTTTCGGTTTT 116 Query 177 GTGGAAGAGTCGTAGAGATGT-TATTGCGAAAGCTTCGATTGAAATGGCGGAATCGAATT 235 | ||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct 117 GGGGAAGAGTCGTAGAGATGTGT-TTGCGAAAGCTTCGATGGAAATGGCGGAATCGAATT 175 Query 236 CGATATCTTCCGTTGTTGTCAATT-C-CT---C----TGGTCCTATCATCGTGATTGATA 286 ||||| |||||||||||||||||| | || | ||||||||||||||| ||||||| Sbjct 176 CGATACCTTCCGTTGTTGTCAATTCCTCTAAGCAGAATGGTCCTATCATCGTCATTGATA 235 Query 287 ATTACGACAGCTTCACTTACAATCTCTGCCAGTATATGGGAGAGCTAGGGTGCCATTTTG 346 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct 236 ATTACGACAGCTTCACTTACAATCTCTGCCAGTATATGGGAGAGCTAGGATGCCATTTCG 295 Query 347 AAGTTTACCGCAATGATGAACTTACAGTTGAGGAGCTGAAAAGAAAAAAGCCAAGAGGAT 406 |||||||||||||||||||||||||||| ||||||||||||| |||| |||||||| Sbjct 296 AAGTTTACCGCAATGATGAACTTACAGTAGAGGAGCTGAAAA-AAAAT--CCAAGAGGGG 352 Query 407 TGTTGATTTCTCCTGGACCTGGTA 430 | |||||||||||||||||||||| Sbjct 353 TATTGATTTCTCCTGGACCTGGTA 376 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 41744594115 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5