BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G58010.1 Length=1019 Score E Sequences producing significant alignments: (Bits) Value Ahg332092 jgi|Araly1|332092|fgenesh1_pm.C_scaffold_8001435 1458 0.0 > Ahg332092 jgi|Araly1|332092|fgenesh1_pm.C_scaffold_8001435 Length=894 Score = 1458 bits (789), Expect = 0.0 Identities = 859/894 (96%), Gaps = 0/894 (0%) Strand=Plus/Plus Query 1 ATGGAAAATGGAAATGGAGAAGGAAAAGGAGAATTCATAAACCAAAACAATGACTTCTTC 60 ||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct 1 ATGGAAAATGGGAATGGAGAAGGAAAGGGAGAGTTCATAAACCAAAACAATGACTTCTTC 60 Query 61 CTTGATTCCATGTCAATGctctcctctctccctccttgttgggatccatctcttcctcct 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 CTTGATTCCATGTCAATGCTCTCCTCTCTCCCTCCTTGTTGGGATCCATCTCTTCCTCCT 120 Query 121 cctcctcctccGCCACAATCTCTTTTCCACGCTCTAGCCGTCGACGCCCCCTTCCCCGAC 180 ||||||||||| || |||||||||||||| ||||| |||||||| || |||||||||||| Sbjct 121 CCTCCTCCTCCACCGCAATCTCTTTTCCATGCTCTCGCCGTCGATGCTCCCTTCCCCGAC 180 Query 181 CAGTTCCATCATCCTCAGGAGTCAGGAGGTCCAACAATGGGTAGCCAAGAAGGGTTACAG 240 ||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct 181 CAGTTCCATCACCCTCAGGAGTCAGGTGGTCCAACAATGGGAAGCCAAGAAGGGTTACAG 240 Query 241 CCACAAGGTACAGTGTCGACCACGAGCGCACCTGTTGTTCGTCAAAAGCCAAGAGTTCGA 300 ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 241 GCACAAGGGACAGTGTCGACCACGAGCGCACCTGTTGTTCGTCAAAAGCCAAGGGTTCGA 300 Query 301 GCCAGGAGAGGCCAAGCCACCGATCCTCACAGTATCGCTGAGAGGCTTAGAAGGGAACGC 360 ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 301 GCCAGGAGAGGCCAAGCCACCGATCCTCACAGTATCGCTGAGAGGCTAAGGAGGGAACGT 360 Query 361 ATCGCAGAGCGTATGAAGTCTCTCCAAGAACTGGTTCCCAACACCAACAAGACGGATAAG 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 ATCGCAGAGCGTATGAAGTCTCTCCAAGAACTGGTTCCCAACACCAACAAGACGGATAAG 420 Query 421 GCATCAATGTTGGACGAGATCATCGAGTATGTTAGGTTCCTTCAGCTTCAAGTCAAAGTA 480 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 421 GCATCAATGTTGGACGAGATCATCGAATATGTTAGGTTCCTTCAGCTTCAAGTCAAAGTA 480 Query 481 CTAAGCATGAGCAGATTGGGAGGTGCAGGATCAGTTGGTCCACGCCTCAATGGTCTCTCC 540 |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| Sbjct 481 CTAAGCATGAGCAGATTGGGAGGTGCAGGAGCAGTTGGTCCACGCCTAAATGGTCTCTCC 540 Query 541 GCAGAGGCAGGAGGACGGCTCAATGCCCTCACTGCACCGTGCAATGGCTTAAATGGGAAT 600 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 GCAGAGGCTGGAGGACGGCTCAATGCCCTCACTGCACCGTGCAATGGCTTAAATGGGAAT 600 Query 601 GGAAACGCTACAGGATCGTCCAATGAGAGCCTAAGGTCAACAGAACAAAGAGTGGCGAAA 660 ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct 601 GGAAACGTTACAGGATCATCCAATGAGAGCCTAAGGTCAACAGAACAAAGAGTGGCAAAA 660 Query 661 CTGATGGAGGAAGACATGGGATCAGCAATGCAATACCTTCAAGGGAAGGGGCTTTGCTTA 720 |||||||| ||||| ||||||||||||||||| || |||||||||||||||||||||||| Sbjct 661 CTGATGGAAGAAGATATGGGATCAGCAATGCAGTATCTTCAAGGGAAGGGGCTTTGCTTA 720 Query 721 ATGCCAATATCTCTCGCAACCGCGATATCATCATCAACTACTCACTCTCGTGGATCCCTC 780 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 721 ATGCCAATCTCTCTCGCAACCGCGATATCATCATCAACTACTCACTCTCGTGGATCTCTC 780 Query 781 TTTAACCCCATCTCCAGTGCTGTAGCAGCAGAGGATTCAAATGTAACAGCAACTGCAGTT 840 |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| Sbjct 781 TTTAACCCCATCTCCAATGCCGTAGCAGCAGAGGATTCAAATGTAACAGCAACTGCAGTT 840 Query 841 GCTGCACCTGAAGCCTCGTCTACTATGGATGATGTATCTGCTTCCAAGGCCTGA 894 ||||||||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct 841 GCTGCACCTGAAGCCTCCTCTACTATGGATGATGTATCTGCCTCCAAGGCCTGA 894 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 37894179498 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5