BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G58360.1 Length=891 Score E Sequences producing significant alignments: (Bits) Value Ahg332123 jgi|Araly1|332123|fgenesh1_pm.C_scaffold_8001466 1134 0.0 > Ahg332123 jgi|Araly1|332123|fgenesh1_pm.C_scaffold_8001466 Length=891 Score = 1134 bits (614), Expect = 0.0 Identities = 804/891 (90%), Gaps = 32/891 (4%) Strand=Plus/Plus Query 1 ATGAAACAGAAAATGGGGACTCACAAGTTCAGATTTTCAGACATGATGCCTCATTCATGG 60 ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1 ATGAATCAGAAAATGGGGACTCACAAGTTCAGATTTTCAGACATTATGCCTCATTCATGG 60 Query 61 CTCTATAAGCTCAAAGGGATGAGCAGAAGTAGCAGAAAACACCATCTTTCTTCTCCCAAA 120 |||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||| Sbjct 61 ATCTATAAGCTCAAAGGGATGAGTAGAAGTAGCAGAAAACACCATCCTTCTTCTCCTAAA 120 Query 121 CATCTCTCCTCCGCTGATGCTTCTTCCTCAAGAAAGCTCCGGGACCCTCTTCGACGTCTT 180 || ||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct 121 CACCTCTCTTCCGCTGATGCTTCTTCCTCAAGAAAGCTCCGTGACCCTCATCGACGTCTT 180 Query 181 TCTTCGACTGCTCATCATCCTCAAGCTTCTAATTCACCTCCCAAATCTTCTTCTTTCAAG 240 |||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct 181 TCTTCGACTGCTAATCATCCTCAAGTTTCTAATTCACCTCCAAAATCTTCTTCTTTCAAG 240 Query 241 AGAAAAATCAAACGTAAAACCGTTTACAAGCCTTCCTCAAGGCTCAAGCTCTCTACCTCT 300 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct 241 AGAAAAATCAAACGTAAAACCATTTACAAGCCTTCCTCAAGGCTCAAGCTCTCTACATCT 300 Query 301 TCCTCTCTAAATCATCGCTCTAAGTCATCATCCTCTGCAAATGCAATCTCCGATTCCGCC 360 || |||||||||||||| ||||| |||||||||||||||||| ||||||| ||||||| | Sbjct 301 TCTTCTCTAAATCATCGTTCTAAATCATCATCCTCTGCAAATTCAATCTCTGATTCCGTC 360 Query 361 GTTGGAAGCTTCTTAGATCGTGTATCATCTCCTTCTGACCAAAACTTTGTAC-ATGATCC 419 |||||||||| ||||||||||||||||||||||||||||||||| ||| ||| ||||||| Sbjct 361 GTTGGAAGCTCCTTAGATCGTGTATCATCTCCTTCTGACCAAAAATTT-TACCATGATCC 419 Query 420 TGAACCGCATTCATCAATTGACATTAAGGACGAGCTCTCTGTGAGGAAGCTTGATGATGT 479 ||||| ||||||| | |||||||||||||||| | |||||||| ||||||||||||||| Sbjct 420 TGAACTGCATTCA--A-TTGACATTAAGGACGACCGCTCTGTGAAGAAGCTTGATGATGT 476 Query 480 GCCTGAAGATCCTTCAGTT-TCACCAAACTTGAGTCCT-----G----AGACTGCAAAGG 529 |||||||||||||| || |||||||||||||||||| | |||||||||||| Sbjct 477 ATCTGAAGATCCTTCA-TTCTCACCAAACTTGAGTCCTCTTCAGGTTGAGACTGCAAAGG 535 Query 530 AACCACCCTTTGAGATGATGACACAGCAGAAACTGAAGAAACCGAAAGCTCATTCGTCAG 589 ||||||||||| ||||||| ||||||||| | |||||||||||||| |||| |||| ||| Sbjct 536 AACCACCCTTTAAGATGATTACACAGCAGGATCTGAAGAAACCGAATGCTCGTTCGACAG 595 Query 590 GGATAAAGATTCC--CA----CG---AAGATCGTGAGAAAGAAGAAAAAGG-AAAGAACG 639 |||||||||||| || | ||||||| ||||||||||| ||||| ||| | || Sbjct 596 GGATAAAGATTCGGTCAAATTCTCCCAAGATCGCGAGAAAGAAGACAAAGGGAAATA-CG 654 Query 640 TCCCAGGTATCGAAGAAAAAGGGGGTTGTAAAGAGCTTT-GCGATAGTTCTGTCTTCGGT 698 || |||||||||||| |||||| ||||||||| ||| || |||||||||||||| || Sbjct 655 -CC--GGTATCGAAGAAGAAGGGGACTGTAAAGAG-TTTCGCCATAGTTCTGTCTTCAGT 710 Query 699 GGATCCTGAGAAAGATTTCAGAGAATCCATGGTTGAGATGATTATGGAGAACAAGATGAG 758 |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct 711 GGATCCTGAGAAAGATTTCAGAGAATCCATGGTTGAGATGATCATGGAAAACAAGATGAG 770 Query 759 GGAACAGAAAGATCTGGAAGATCTTCTAGCATGTTATCTTTCATTGAATTCGAGCGAGTA 818 |||||| ||||| |||||||||||||| |||||||| |||||| |||||||||||||||| Sbjct 771 GGAACAAAAAGACCTGGAAGATCTTCTCGCATGTTACCTTTCACTGAATTCGAGCGAGTA 830 Query 819 TCATGACGTTATCATCAAGGCTTTCGAGAATACATGGTTACATTTGACTCA 869 |||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct 831 TCATGATGTTATCATCAAGGCTTTCGAGAAAACATGGTTACATTTGACTCA 881 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 33014446122 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5